View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13963_high_7 (Length: 347)
Name: NF13963_high_7
Description: NF13963
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13963_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 16 - 309
Target Start/End: Original strand, 3273552 - 3273844
Alignment:
| Q |
16 |
ataaccaaatgtcattccagcaacccacattgatggtgaggatggtaaaaatatggtaggaaatagtgctatagaagcaaacacataaatagctaactcc |
115 |
Q |
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| T |
3273552 |
ataaccaaatgtcattccagcaacccacattgatggtgaggatggtaaaaatatggtaggaaatagtgctatagaagcaaacacataaatagctaactcc |
3273651 |
T |
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| Q |
116 |
gatgtggtgaatgtgtctctctgccaaattattactggaataaacacctgaaaaataaaagctatgttaattatcattgagataggtaattatgcattgt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3273652 |
gatgtggtgaatgtgtctctctgccaaattattactggaataaacacctgaaaaataaaagctatgttaattatcattgagataggtaattatgcattgt |
3273751 |
T |
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| Q |
216 |
attttatgaaaattgaaagnnnnnnnnttgttacaatgaaatagtaaatattgacattgcattgatgattatgatcatgaacatcagcccagca |
309 |
Q |
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| T |
3273752 |
attttatgaaaattgaaag-aaaaaaattgttacaatgaaatagtaaatattgacattgcattgatgattatgatcatgaacatcagcacagca |
3273844 |
T |
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