View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13964_high_7 (Length: 386)
Name: NF13964_high_7
Description: NF13964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13964_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 367; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 367; E-Value: 0
Query Start/End: Original strand, 1 - 367
Target Start/End: Complemental strand, 34702608 - 34702242
Alignment:
| Q |
1 |
gagaatagtagattacataaaccaacaaatcaagatataaaaattaataaatggaatgtaaattaacatatttgtctcatggtatatacactttatctgg |
100 |
Q |
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| T |
34702608 |
gagaatagtagattacataaaccaacaaatcaagatataaaaattaataaatggaatgtaaattaacatatttgtctcatggtatatacactttatctgg |
34702509 |
T |
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| Q |
101 |
atcagttcagtcaaagacaaatggaaacaaccaaaaagaaaattgaaagtaaacctattgtgattaccggcctaataagttttcttacgttaagtatgaa |
200 |
Q |
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| T |
34702508 |
atcagttcagtcaaagacaaatggaaacaaccaaaaagaaaattgaaagtaaacctattgtgattaccggcctaataagttttcttacgttaagtatgaa |
34702409 |
T |
|
| Q |
201 |
tgtgaaccacaaattaaaagtaaattaaacagctgttaacacttgcttgataagattattgaactgaggttaacttcacttaccattcacgtaaagggtg |
300 |
Q |
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| T |
34702408 |
tgtgaaccacaaattaaaagtaaattaaacagctgttaacacttgcttgataagattattgaactgaggttaacttcacttaccattcacgtaaagggtg |
34702309 |
T |
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| Q |
301 |
tctgaagaattgccggcaataagcaatttatcttacaacacatcacattggtttctcactttgaact |
367 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34702308 |
tctgaagaattgccggcaataagcaatttatcttacaacacatcacattggtttctcactttgaact |
34702242 |
T |
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