View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13964_low_8 (Length: 291)
Name: NF13964_low_8
Description: NF13964
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13964_low_8 |
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Alignment Details
Target: chr8 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 272
Target Start/End: Complemental strand, 37979777 - 37979506
Alignment:
| Q |
1 |
atgctggaagtcatggcatggatattaaaggaccaacaaaagagtccaaatacaacaaagtgagtaaaatagctctagtgtannnnnnnaatttgaccta |
100 |
Q |
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| T |
37979777 |
atgctggaagtcatggcatggatattaaagggccaacaaaagagtccaaatacaacaaagtgagtaaaatagctctagtgtatttttttaatttgaccta |
37979678 |
T |
|
| Q |
101 |
tatagtgccgtggaataaggtcttaaattttttaaattctaaaaatgaattaacattgattatggtttgtagaataacaaagcagaggaagtactttttc |
200 |
Q |
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| T |
37979677 |
tatagtgccgtggaataaggtcttcaattttttaaattctaaaaatgaattaacattgattatggtttgtagaataacaaagctgaggaagtactttttc |
37979578 |
T |
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| Q |
201 |
aacctgccagtgaatttgttcccatgataaatgaggttagtcacactcacacaactcttcatgatattctag |
272 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
37979577 |
aacctgccagagaatttgttcccatgataaatgaggttagtcacactcacacaactcttcatgaaattctag |
37979506 |
T |
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