View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13965_low_16 (Length: 252)

Name: NF13965_low_16
Description: NF13965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13965_low_16
NF13965_low_16
[»] chr2 (29 HSPs)
chr2 (19-92)||(23870129-23870202)
chr2 (13-92)||(22651470-22651549)
chr2 (182-252)||(22651643-22651713)
chr2 (19-92)||(22718165-22718238)
chr2 (181-227)||(28261558-28261604)
chr2 (179-239)||(4703540-4703601)
chr2 (179-227)||(3527408-3527456)
chr2 (179-227)||(13878660-13878708)
chr2 (179-227)||(14018785-14018833)
chr2 (179-227)||(16136500-16136548)
chr2 (179-227)||(25068263-25068311)
chr2 (180-239)||(29543202-29543262)
chr2 (180-227)||(20560785-20560832)
chr2 (180-227)||(33012470-33012517)
chr2 (180-227)||(35333927-35333974)
chr2 (179-239)||(15920262-15920323)
chr2 (179-224)||(43696293-43696338)
chr2 (183-227)||(3465330-3465374)
chr2 (179-227)||(4739751-4739799)
chr2 (179-227)||(4878399-4878447)
chr2 (179-227)||(9689636-9689684)
chr2 (179-227)||(9978329-9978377)
chr2 (179-227)||(12890768-12890816)
chr2 (179-227)||(18141146-18141194)
chr2 (179-227)||(34416414-34416462)
chr2 (179-227)||(34471378-34471426)
chr2 (179-227)||(36868430-36868478)
chr2 (180-239)||(40038975-40039035)
chr2 (183-227)||(44942708-44942752)
[»] chr1 (18 HSPs)
chr1 (180-239)||(42491278-42491338)
chr1 (179-239)||(42276764-42276825)
chr1 (179-227)||(4882028-4882076)
chr1 (179-227)||(29205690-29205738)
chr1 (179-227)||(44517570-44517618)
chr1 (180-245)||(900433-900499)
chr1 (182-239)||(25032757-25032815)
chr1 (179-239)||(32784488-32784549)
chr1 (182-237)||(3233182-3233238)
chr1 (180-239)||(10304972-10305032)
chr1 (179-223)||(10627431-10627475)
chr1 (179-223)||(12872032-12872076)
chr1 (179-227)||(12967398-12967446)
chr1 (179-223)||(13152853-13152897)
chr1 (179-227)||(15390903-15390951)
chr1 (179-227)||(16141033-16141081)
chr1 (179-227)||(28677790-28677838)
chr1 (179-227)||(46589549-46589597)
[»] scaffold0536 (1 HSPs)
scaffold0536 (179-238)||(3305-3365)
[»] chr5 (19 HSPs)
chr5 (179-227)||(33164120-33164168)
chr5 (179-239)||(6635657-6635718)
chr5 (179-227)||(17331750-17331798)
chr5 (179-227)||(23881767-23881815)
chr5 (179-227)||(28662471-28662519)
chr5 (180-227)||(34431486-34431533)
chr5 (180-227)||(39531060-39531107)
chr5 (179-239)||(11734496-11734557)
chr5 (179-239)||(17095892-17095953)
chr5 (179-227)||(586162-586210)
chr5 (179-227)||(5378703-5378751)
chr5 (179-227)||(6681528-6681576)
chr5 (179-227)||(9034610-9034658)
chr5 (182-245)||(17218105-17218169)
chr5 (179-227)||(19200247-19200295)
chr5 (180-239)||(32309905-32309965)
chr5 (179-227)||(39179496-39179544)
chr5 (179-227)||(40775162-40775210)
chr5 (180-224)||(42505065-42505109)
[»] chr6 (16 HSPs)
chr6 (179-237)||(15589776-15589835)
chr6 (180-252)||(4663486-4663559)
chr6 (179-239)||(6295900-6295961)
chr6 (179-239)||(6302710-6302771)
chr6 (179-239)||(30813466-30813527)
chr6 (179-227)||(4660850-4660898)
chr6 (179-227)||(5146348-5146396)
chr6 (179-227)||(23654671-23654719)
chr6 (180-227)||(12653970-12654017)
chr6 (180-227)||(19402504-19402551)
chr6 (179-239)||(31705574-31705635)
chr6 (179-227)||(1106514-1106562)
chr6 (179-227)||(2488544-2488592)
chr6 (179-227)||(12481030-12481078)
chr6 (180-224)||(23843090-23843134)
chr6 (179-227)||(35219564-35219612)
[»] chr3 (19 HSPs)
chr3 (182-239)||(48401501-48401559)
chr3 (180-237)||(49627764-49627822)
chr3 (179-239)||(13701661-13701722)
chr3 (179-223)||(105707-105751)
chr3 (179-227)||(11819506-11819554)
chr3 (179-227)||(24483355-24483403)
chr3 (180-239)||(41867993-41868053)
chr3 (180-227)||(55090359-55090406)
chr3 (182-239)||(2192487-2192545)
chr3 (179-224)||(14585887-14585932)
chr3 (179-224)||(19645615-19645660)
chr3 (179-239)||(55455271-55455332)
chr3 (183-227)||(1074557-1074601)
chr3 (182-237)||(4206221-4206277)
chr3 (179-227)||(30155949-30155997)
chr3 (179-227)||(33637816-33637864)
chr3 (183-223)||(40883538-40883578)
chr3 (180-239)||(53155090-53155150)
chr3 (179-227)||(55446470-55446518)
[»] chr8 (17 HSPs)
chr8 (199-252)||(37720215-37720268)
chr8 (179-227)||(2024883-2024931)
chr8 (179-227)||(2234129-2234177)
chr8 (180-239)||(10334885-10334945)
chr8 (179-227)||(24790829-24790877)
chr8 (179-227)||(31202870-31202918)
chr8 (180-227)||(10148358-10148405)
chr8 (180-245)||(5457453-5457519)
chr8 (182-239)||(38545478-38545536)
chr8 (182-227)||(2968937-2968982)
chr8 (179-239)||(9501977-9502038)
chr8 (183-227)||(1809901-1809945)
chr8 (180-235)||(5526215-5526271)
chr8 (180-224)||(23767143-23767187)
chr8 (179-227)||(31712739-31712787)
chr8 (179-227)||(32104502-32104550)
chr8 (180-239)||(37613045-37613105)
[»] chr4 (19 HSPs)
chr4 (179-239)||(42197962-42198023)
chr4 (179-227)||(13965965-13966013)
chr4 (179-227)||(14346832-14346880)
chr4 (179-227)||(23067513-23067561)
chr4 (180-227)||(7084364-7084411)
chr4 (179-237)||(20887408-20887467)
chr4 (180-227)||(24826061-24826108)
chr4 (180-227)||(38434999-38435046)
chr4 (180-227)||(45350722-45350769)
chr4 (180-227)||(45360201-45360248)
chr4 (182-239)||(7083475-7083533)
chr4 (180-245)||(25658564-25658630)
chr4 (179-227)||(6882366-6882414)
chr4 (179-227)||(18502493-18502541)
chr4 (179-227)||(24100555-24100603)
chr4 (179-227)||(27091130-27091178)
chr4 (179-227)||(27395238-27395286)
chr4 (179-227)||(43244032-43244080)
chr4 (179-227)||(56236482-56236530)
[»] scaffold0155 (1 HSPs)
scaffold0155 (179-227)||(35497-35545)
[»] chr7 (18 HSPs)
chr7 (179-227)||(21991084-21991132)
chr7 (179-227)||(48643477-48643525)
chr7 (180-227)||(4621032-4621079)
chr7 (182-240)||(11833426-11833485)
chr7 (180-227)||(44482530-44482577)
chr7 (179-226)||(45457207-45457254)
chr7 (179-224)||(2623017-2623062)
chr7 (179-239)||(6667804-6667865)
chr7 (179-239)||(26017323-26017384)
chr7 (185-237)||(32643379-32643432)
chr7 (179-239)||(41288365-41288426)
chr7 (180-239)||(3266783-3266843)
chr7 (179-227)||(9785739-9785787)
chr7 (187-227)||(20206208-20206248)
chr7 (179-227)||(23808748-23808796)
chr7 (179-227)||(36253352-36253400)
chr7 (184-239)||(42603435-42603491)
chr7 (179-227)||(46025706-46025754)
[»] scaffold0432 (1 HSPs)
scaffold0432 (182-252)||(2102-2173)
[»] scaffold0288 (1 HSPs)
scaffold0288 (179-228)||(21014-21063)
[»] scaffold0294 (1 HSPs)
scaffold0294 (179-227)||(3718-3766)
[»] scaffold0001 (1 HSPs)
scaffold0001 (180-239)||(403900-403960)


Alignment Details
Target: chr2 (Bit Score: 62; Significance: 7e-27; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 19 - 92
Target Start/End: Complemental strand, 23870202 - 23870129
Alignment:
Q  19 actaaatttatggaaaatagcgctaaataatacacagtgattaatatgaagtcacaagttaagaaatttgaagg 92  Q
    |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  23870202 actagatttatggaaaatagcactaaataatacaaagtgattaatatgaagtcacaagttaagaaatttgaagg 23870129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 92
Target Start/End: Original strand, 22651470 - 22651549
Alignment:
Q  13 ccaccaactaaatttatggaaaatagcgctaaataatacacagtgattaatatgaagtcacaagttaagaaatttgaagg 92  Q
    ||||||||||||||||||||||||||| || ||||||||| ||||||||||||||||||| |||||||||||||| ||||    
T  22651470 ccaccaactaaatttatggaaaatagcactgaataatacaaagtgattaatatgaagtcataagttaagaaatttcaagg 22651549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 22651643 - 22651713
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgatcaatataaattcgttaaagataaaa 252  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  22651643 aaaaataaacaatattcattcattcaagttgacaaaatacatcgatcaatataaattcgttaaagataaaa 22651713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 19 - 92
Target Start/End: Original strand, 22718165 - 22718238
Alignment:
Q  19 actaaatttatggaaaatagcgctaaataatacacagtgattaatatgaagtcacaagttaagaaatttgaagg 92  Q
    |||| |||||||||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  22718165 actagatttatggaaaataacactaaataatacaaagtgattaatatgaagtcacaagttaagaaatttgaagg 22718238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 227
Target Start/End: Original strand, 28261558 - 28261604
Alignment:
Q  181 caaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||||||| ||||||||||| |||| |||||||||||||    
T  28261558 caaaaataaacaatattcattcattcaaattgatagagtacatcgat 28261604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 4703601 - 4703540
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||| ||| |||||||||||||||||| ||||| ||||||    
T  4703601 gacaaaaataaacgatattcattcatccaaattgacagagtacatcgatacaatacaaattc 4703540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 3527456 - 3527408
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  3527456 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 3527408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 13878660 - 13878708
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  13878660 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 13878708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 14018785 - 14018833
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  14018785 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 14018833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 16136548 - 16136500
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  16136548 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 16136500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 25068311 - 25068263
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  25068311 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 25068263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 29543262 - 29543202
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  29543262 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 29543202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 20560785 - 20560832
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  20560785 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 20560832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 33012517 - 33012470
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  33012517 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 33012470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 35333974 - 35333927
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  35333974 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 35333927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 15920323 - 15920262
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||  |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  15920323 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 15920262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 43696338 - 43696293
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  43696338 gacaaaaataaacgatattcattcattcaaattgatagagtacatc 43696293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 3465374 - 3465330
Alignment:
Q  183 aaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||  |||||||||||||||| |||| |||||||||||||    
T  3465374 aaaataaaagatatccattcattcaaattgaaagagtacatcgat 3465330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 4739799 - 4739751
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||| ||||| |||| ||||||||||| |||| |||||||||||||    
T  4739799 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgat 4739751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 4878399 - 4878447
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  4878399 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 4878447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 9689636 - 9689684
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| |||||||| || |||| |||||||||||||    
T  9689636 gacaaaaataaacgatatacattcatttaaattgatagagtacatcgat 9689684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 9978329 - 9978377
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||| ||||||    
T  9978329 gacaaaaataaactatattcattcattcaaattgatagagtatatcgat 9978377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 12890768 - 12890816
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| |||| |||||| |||| |||||||||||||    
T  12890768 gacaaaaataaacgatattcattaattcaaattgatagagtacatcgat 12890816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 18141146 - 18141194
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  18141146 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 18141194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 34416414 - 34416462
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||| | |||| |||||||||||||    
T  34416414 gacaaaaataaacgatattcattcattcgaattgatagagtacatcgat 34416462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 34471426 - 34471378
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| ||||  ||||||||||||    
T  34471426 gacaaaaataaacgatatacattcattcaaattgatggagtacatcgat 34471378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 36868478 - 36868430
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||| ||||||    
T  36868478 gacaaaaataaacgatattcattcattcaaattgatagagtatatcgat 36868430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 40038975 - 40039035
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||||||||||||||  |||| | ||||||||||| ||||| ||||||    
T  40038975 acaaaaataaacgatatccattcattcatattgataaagtacatcgatacaataaaaattc 40039035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Complemental strand, 44942752 - 44942708
Alignment:
Q  183 aaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  44942752 aaaataaacgatattcattcattcaaattgatagagtacatcgat 44942708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 42491338 - 42491278
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||||||| ||||||||||| |||| ||||||||||||| ||||||||||||    
T  42491338 acaaaaataaacaatattcattcattcaaattgatagagtacatcgatacaatataaattc 42491278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 42276825 - 42276764
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||||||||| ||||| ||||| |||| ||||||||||||| ||||| ||||||    
T  42276825 gacaaaaataaacaatatgcattctttcaaattgatagagtacatcgatacaatacaaattc 42276764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 4882028 - 4882076
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  4882028 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 4882076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 29205738 - 29205690
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  29205738 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 29205690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 44517618 - 44517570
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  44517618 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 44517570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 900499 - 900433
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcgttaaa 245  Q
    |||||||||||  |||| ||||||||||| |||| ||||||||||||| |||| |||||||| ||||    
T  900499 acaaaaataaattatattcattcattcaaattgatagagtacatcgatacaatgtaaattcgctaaa 900433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 25032757 - 25032815
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  25032757 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 25032815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 32784549 - 32784488
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| |||| |||||| |||| ||||||||||||| ||||| ||||||    
T  32784549 gacaaaaataaactatattcattaattcaaattgatagagtacatcgatacaatacaaattc 32784488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 3233238 - 3233182
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaat 237  Q
    |||||||||| |||| ||||||||||| |||| ||| ||||||||| ||||||||||    
T  3233238 aaaaataaacgatattcattcattcaaattgatagattacatcgatacaatataaat 3233182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 10305032 - 10304972
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||  |||| ||||||||||| |||| ||| ||||||||| ||||||||||||    
T  10305032 acaaaaataaaggatattcattcattcaaattgatagattacatcgatacaatataaattc 10304972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 10627475 - 10627431
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacat 223  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||    
T  10627475 gacaaaaataaacgatattcattcattcaaattgaaagagtacat 10627431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 12872076 - 12872032
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacat 223  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||    
T  12872076 gacaaaaataaacgatattcattcattcaaattgatagagtacat 12872032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 12967398 - 12967446
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  12967398 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 12967446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 223
Target Start/End: Complemental strand, 13152897 - 13152853
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacat 223  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||    
T  13152897 gacaaaaataaacgatattcattcattcaaattgatagagtacat 13152853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 15390903 - 15390951
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| ||||  |||||||||| |||| |||||||||||||    
T  15390903 gacaaaaataaacgatatttattcattcaacttgatagagtacatcgat 15390951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 16141081 - 16141033
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||| ||| |||| |||||||||||||    
T  16141081 gacaaaaataaacgatattcattcatccaaattgatagagtacatcgat 16141033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 28677790 - 28677838
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| |||| |||||| |||| |||||||||||||    
T  28677790 gacaaaaataaacgatattcatttattcaaattgatagagtacatcgat 28677838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 46589597 - 46589549
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  46589597 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 46589549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0536 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 3365 - 3305
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaatt 238  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||||| |||||||||||    
T  3365 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaatt 3305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.000000000006; HSPs: 19)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 33164120 - 33164168
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| ||||||||||||||||||    
T  33164120 gacaaaaataaacgatattcattcattcaaattgacagagtacatcgat 33164168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 6635718 - 6635657
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| || | ||||||||||| |||| ||||||||||||| ||||||||||||    
T  6635718 gacaaaaataaacgattttcattcattcaaattgatagagtacatcgatacaatataaattc 6635657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 17331798 - 17331750
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  17331798 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 17331750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 23881767 - 23881815
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  23881767 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 23881815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 28662519 - 28662471
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||||||||| ||||||||||| |||| ||||||| |||||    
T  28662519 gacaaaaataaacaatattcattcattcaaattgaaagagtacgtcgat 28662471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 34431533 - 34431486
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  34431533 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 34431486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 39531060 - 39531107
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  39531060 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 39531107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 11734496 - 11734557
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||||||| |||| | ||||||||||| ||||| ||||||    
T  11734496 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattc 11734557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 17095892 - 17095953
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| | || ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  17095892 gacaaaaataaacgacattcattcattcaaattgatagagtacatcgatacaatacaaattc 17095953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 586210 - 586162
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||| ||||| |||| ||||||||||| |||| |||||||||||||    
T  586210 gacaaaactaaacgatattcattcattcaaattgatagagtacatcgat 586162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 5378751 - 5378703
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  5378751 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 5378703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 6681528 - 6681576
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||| | |||| |||||||||||||    
T  6681528 gacaaaaataaacgatattcattcattctaattgatagagtacatcgat 6681576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 9034610 - 9034658
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||| |  |||||||||||||||| |||| |||||||||||||    
T  9034610 gacaaaaatatatgatatccattcattcaaattgatagagtacatcgat 9034658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 245
Target Start/End: Complemental strand, 17218169 - 17218105
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcgttaaa 245  Q
    |||||||||  |||| ||||||||||| |||| ||||||||||||| ||||| ||||||| ||||    
T  17218169 aaaaataaatgatattcattcattcaaattgatagagtacatcgatacaataaaaattcgctaaa 17218105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 19200247 - 19200295
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||||||||| ||||||||||| || | | |||||||||||    
T  19200247 gacaaaaataaacaatattcattcattcaaattaataaagtacatcgat 19200295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 32309965 - 32309905
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| ||||  |||||||||| |||| |||||||||||||  |||||||||||    
T  32309965 acaaaaataaacgatattgattcattcaaattgatagagtacatcgatataatataaattc 32309905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 39179496 - 39179544
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| | |||||||||||    
T  39179496 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgat 39179544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 40775210 - 40775162
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  40775210 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 40775162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 42505065 - 42505109
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||    
T  42505065 acaaaaataaacgatattcattcattcaaattgatagagtacatc 42505109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000002; HSPs: 16)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 15589776 - 15589835
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaat 237  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  15589776 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaat 15589835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 252
Target Start/End: Original strand, 4663486 - 4663559
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcgttaaagataaaa 252  Q
    ||||||||||||||||| ||||||||||| |||  ||||||||||||| ||||  ||||||| |||| ||||||    
T  4663486 acaaaaataaacaatattcattcattcaaattggtagagtacatcgatacaatgaaaattcgctaaaaataaaa 4663559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 6295900 - 6295961
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| ||||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  6295900 gacaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaattc 6295961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 6302710 - 6302771
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| ||||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  6302710 gacaaaaataaataatattcattcattcaaattgatagagtacatcgatacaatacaaattc 6302771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 30813527 - 30813466
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  30813527 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 30813466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 4660898 - 4660850
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  4660898 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 4660850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 5146396 - 5146348
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  5146396 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 5146348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 23654719 - 23654671
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  23654719 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 23654671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 12653970 - 12654017
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  12653970 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 12654017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 19402504 - 19402551
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  19402504 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 19402551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 31705635 - 31705574
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| |||||||| || |||| ||||||||||||| ||||| ||||||    
T  31705635 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattc 31705574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 1106514 - 1106562
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||  |||| |||||||||||||    
T  1106514 gacaaaaataaacgatattcattcattcagattgatagagtacatcgat 1106562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 2488592 - 2488544
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| ||||  |||||||||| |||| |||||||||||||    
T  2488592 gacaaaaataaacgatatttattcattcaaattgatagagtacatcgat 2488544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 12481030 - 12481078
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| | |||||||||||    
T  12481030 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgat 12481078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Original strand, 23843090 - 23843134
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    ||||||||||| ||||| ||||||||||| |||| ||||||||||    
T  23843090 acaaaaataaataatattcattcattcaaattgatagagtacatc 23843134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 35219564 - 35219612
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||  |||||||||||||    
T  35219564 gacaaaaataaacgatattcattcattcaaattggtagagtacatcgat 35219612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 35; Significance: 0.00000000009; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 48401559 - 48401501
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||||    
T  48401559 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaattc 48401501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 180 - 237
Target Start/End: Original strand, 49627764 - 49627822
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaat 237  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||||||||    
T  49627764 acaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatataaat 49627822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 13701661 - 13701722
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  13701661 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 13701722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 223
Target Start/End: Original strand, 105707 - 105751
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacat 223  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||    
T  105707 gacaaaaataaacaatattcattcattcaaattgatagagtacat 105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 11819554 - 11819506
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  11819554 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 11819506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 24483355 - 24483403
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  24483355 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 24483403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 41867993 - 41868053
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  41867993 acaaaaataaacgatatgcattcattcaaattgatagagtacatcgatacaatacaaattc 41868053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 55090359 - 55090406
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  55090359 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 55090406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Complemental strand, 2192545 - 2192487
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  2192545 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 2192487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 14585932 - 14585887
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  14585932 gacaaaaataaacgatattcattcattcaaattgatagagtacatc 14585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 19645660 - 19645615
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  19645660 gacaaaaataaacgatattcattcattcaaattgatagagtacatc 19645615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 55455332 - 55455271
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||| ||| ||||| ||||||    
T  55455332 gacaaaaataaacgatattcattcattcaaattgatagagtacattgatacaatacaaattc 55455271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 1074557 - 1074601
Alignment:
Q  183 aaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  1074557 aaaataaacgatattcattcattcaaattgatagagtacatcgat 1074601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 4206221 - 4206277
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaat 237  Q
    ||||||||||||| | ||||||||||| |||| |||||| |||||| ||||||||||    
T  4206221 aaaaataaacaatgttcattcattcaaattgatagagtatatcgatacaatataaat 4206277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 30155949 - 30155997
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||  ||||||||||| |||| |||||||||||||    
T  30155949 gacaaaaataaacgatactcattcattcaaattgatagagtacatcgat 30155997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 33637864 - 33637816
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| | |||||||||||    
T  33637864 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgat 33637816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 223
Target Start/End: Original strand, 40883538 - 40883578
Alignment:
Q  183 aaaataaacaatatccattcattcaagttgacagagtacat 223  Q
    |||||||||||||| ||||||||||| |||| |||||||||    
T  40883538 aaaataaacaatattcattcattcaaattgatagagtacat 40883578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 53155090 - 53155150
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||| |||||||| || |||| ||||||||||||| ||||| ||||||    
T  53155090 acaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatacaaattc 53155150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 55446518 - 55446470
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||| ||||| |||| ||||||||||| ||||||||||| ||||||    
T  55446518 gacaaaagtaaacgatattcattcattcaaattgacagagtatatcgat 55446470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 34; Significance: 0.0000000004; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 199 - 252
Target Start/End: Complemental strand, 37720268 - 37720215
Alignment:
Q  199 attcattcaagttgacagagtacatcgatcaatataaattcgttaaagataaaa 252  Q
    |||||||||| |||| ||||||||||||||||| |||||||| |||| ||||||    
T  37720268 attcattcaaattgatagagtacatcgatcaatgtaaattcgctaaaaataaaa 37720215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 2024883 - 2024931
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||| |||||||||| ||||||||||| |||| |||||||||||||    
T  2024883 gacaaaagtaaacaatattcattcattcaaattgatagagtacatcgat 2024931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 2234129 - 2234177
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  2234129 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 2234177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 10334945 - 10334885
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||||||||||||||| |||| ||||||||| ||| |||| |||||||    
T  10334945 acaaaaataaacgatatccattcattcaaattgatagagtacattgatacaatgtaaattc 10334885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 24790829 - 24790877
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  24790829 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 24790877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 31202918 - 31202870
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  31202918 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 31202870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 10148405 - 10148358
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||||||| ||||||||||| |||| ||| |||||||||    
T  10148405 acaaaaataaacaatattcattcattcaaattgatagattacatcgat 10148358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 5457519 - 5457453
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcgttaaa 245  Q
    |||||||||||  |||| ||||||||||| |||| |||||||||||||  |||||||||||| ||||    
T  5457519 acaaaaataaatgatattcattcattcaaattgatagagtacatcgatataatataaattcgctaaa 5457453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 38545478 - 38545536
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||| |||| ||||||||||| |||| |||||| |||||| ||||||||||||    
T  38545478 aaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatataaattc 38545536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 227
Target Start/End: Complemental strand, 2968982 - 2968937
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||| |||| ||||||||||| |||| |||||||||||||    
T  2968982 aaaaataaacgatattcattcattcaaattgatagagtacatcgat 2968937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 9502038 - 9501977
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||| ||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  9502038 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 9501977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 183 - 227
Target Start/End: Original strand, 1809901 - 1809945
Alignment:
Q  183 aaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||| |||| ||||||||||| |||| |||||||||||||    
T  1809901 aaaataaacgatattcattcattcaaattgatagagtacatcgat 1809945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 5526271 - 5526215
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataa 235  Q
    |||||||||||| ||||  |||||||||| |||| ||||||||||||| ||||||||    
T  5526271 acaaaaataaacgatatttattcattcaaattgatagagtacatcgatacaatataa 5526215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 23767187 - 23767143
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    ||||||||||||||||| ||||||||||| || | ||||||||||    
T  23767187 acaaaaataaacaatattcattcattcaaattaatagagtacatc 23767143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 31712739 - 31712787
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  31712739 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 31712787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 32104502 - 32104550
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  32104502 gacaaaaataaattatattcattcattcaaattgatagagtacatcgat 32104550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 37613105 - 37613045
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||| ||||||||||| |||| |||||| |||||| ||||| ||||||    
T  37613105 acaaaaataaacgatattcattcattcaaattgatagagtatatcgatacaatacaaattc 37613045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 34; Significance: 0.0000000004; HSPs: 19)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 42198023 - 42197962
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| ||||||    
T  42198023 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattc 42197962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 13966013 - 13965965
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  13966013 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 13965965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 14346880 - 14346832
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  14346880 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 14346832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 23067513 - 23067561
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| ||||||||||||||||||    
T  23067513 gacaaaaataaattatattcattcattcaaattgacagagtacatcgat 23067561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 7084411 - 7084364
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  7084411 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 7084364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 237
Target Start/End: Original strand, 20887408 - 20887467
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaat 237  Q
    ||||||||||||| |||| |||||||| || |||| ||||||||||||| ||||||||||    
T  20887408 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgatacaatataaat 20887467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 24826108 - 24826061
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  24826108 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 24826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Complemental strand, 38435046 - 38434999
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  38435046 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 38434999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 45350722 - 45350769
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45350722 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 45350769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 45360201 - 45360248
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  45360201 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 45360248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 182 - 239
Target Start/End: Original strand, 7083475 - 7083533
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||| |||| |||||| |||| |||| ||||||||||||| ||||||||||||    
T  7083475 aaaaataaacgatattcattcactcaaattgatagagtacatcgatacaatataaattc 7083533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 245
Target Start/End: Complemental strand, 25658630 - 25658564
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcgttaaa 245  Q
    ||||||||||||||||| ||||||||||| |||||| | ||||| ||| ||||| ||||||| ||||    
T  25658630 acaaaaataaacaatattcattcattcaaattgacaaaatacattgatacaatacaaattcgctaaa 25658564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 6882414 - 6882366
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||| ||||| |||| ||||||||||| |||| |||||||||||||    
T  6882414 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgat 6882366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 18502493 - 18502541
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| |||||||| || |||| |||||||||||||    
T  18502493 gacaaaaataaacgatattcattcatttaaattgatagagtacatcgat 18502541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 24100603 - 24100555
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  24100603 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 24100555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 27091178 - 27091130
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| ||||  |||||||||| |||| |||||||||||||    
T  27091178 gacaaaaataaacgatatttattcattcaaattgatagagtacatcgat 27091130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 27395286 - 27395238
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| ||||| ||||||||||| |||| ||||| |||||||    
T  27395286 gacaaaaataaataatattcattcattcaaattgatagagttcatcgat 27395238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 43244032 - 43244080
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||| ||||    
T  43244032 gacaaaaataaacgatattcattcattcaaattgatagagtacaccgat 43244080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 56236482 - 56236530
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||    
T  56236482 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgat 56236530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 35545 - 35497
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  35545 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 35497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 33; Significance: 0.000000001; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 21991132 - 21991084
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  21991132 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 21991084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 48643477 - 48643525
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  48643477 gacaaaaataaacgatattcattcattcaaattgatagagtacatcgat 48643525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 4621032 - 4621079
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  4621032 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 4621079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 240
Target Start/End: Complemental strand, 11833485 - 11833426
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcg 240  Q
    |||||||||| |||| ||||||||||| |||| ||||||||||||| ||||| |||||||    
T  11833485 aaaaataaacgatattcattcattcaaattgatagagtacatcgatacaatacaaattcg 11833426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 180 - 227
Target Start/End: Original strand, 44482530 - 44482577
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    |||||||||||| |||| ||||||||||| |||| |||||||||||||    
T  44482530 acaaaaataaacgatattcattcattcaaattgatagagtacatcgat 44482577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 179 - 226
Target Start/End: Original strand, 45457207 - 45457254
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcga 226  Q
    ||||||||||||||||||  |||||||||| |||| ||||||||||||    
T  45457207 gacaaaaataaacaatattgattcattcaaattgatagagtacatcga 45457254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 224
Target Start/End: Complemental strand, 2623062 - 2623017
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatc 224  Q
    ||||||||||||| |||| ||||||||||| |||| ||||||||||    
T  2623062 gacaaaaataaacgatattcattcattcaaattgatagagtacatc 2623017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 6667865 - 6667804
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| ||||||||||| |||| |||| |||||||| ||||| ||||||    
T  6667865 gacaaaaataaacgatattcattcattcaaattgatagagcacatcgatacaatacaaattc 6667804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Original strand, 26017323 - 26017384
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||  |||| ||||||||||| |||| |||||||||||||  |||||||||||    
T  26017323 gacaaaaataaatgatattcattcattcaaattgatagagtacatcgatataatataaattc 26017384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 32643432 - 32643379
Alignment:
Q  185 aataaacaatatccattcattcaagttgacagagtacatcgat-caatataaat 237  Q
    ||||||| |||| |||||||||||||||| |||||||| |||| ||||||||||    
T  32643432 aataaacgatattcattcattcaagttgatagagtacaccgatacaatataaat 32643379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 239
Target Start/End: Complemental strand, 41288426 - 41288365
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||| |||| | ||||||||| |||| ||||||||||||| ||||| ||||||    
T  41288426 gacaaaaataaacgatattctttcattcaaattgatagagtacatcgatacaatacaaattc 41288365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Complemental strand, 3266843 - 3266783
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    ||||||||||||||||| ||||||||||| |||| | ||||||| ||| ||||| ||||||    
T  3266843 acaaaaataaacaatattcattcattcaaattgataaagtacattgatacaatacaaattc 3266783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 9785787 - 9785739
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| || ||||||||||    
T  9785787 gacaaaaataaacgatattcattcattcaaattgatagggtacatcgat 9785739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 187 - 227
Target Start/End: Complemental strand, 20206248 - 20206208
Alignment:
Q  187 taaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||| |||| ||||||||||| ||||||||||||||||||    
T  20206248 taaacgatattcattcattcaaattgacagagtacatcgat 20206208  T

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Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 23808796 - 23808748
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| |||||| ||||||    
T  23808796 gacaaaaataaacgatattcattcattcaaattgagagagtatatcgat 23808748  T

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Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Complemental strand, 36253400 - 36253352
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||  ||||||||||| |||| |||||||||||||    
T  36253400 gacaaaaataaacgatactcattcattcaaattgatagagtacatcgat 36253352  T

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Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 42603435 - 42603491
Alignment:
Q  184 aaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||| || | ||||||||||| |||| ||||||||||||| ||||||||||||    
T  42603435 aaataaacgatgttcattcattcaaattgatagagtacatcgatacaatataaattc 42603491  T

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Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 46025706 - 46025754
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||||||||| |||| ||||||||||| |||| | |||||||||||    
T  46025706 gacaaaaataaacgatattcattcattcaaattgataaagtacatcgat 46025754  T

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Target: scaffold0432 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0432
Description:

Target: scaffold0432; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 252
Target Start/End: Original strand, 2102 - 2173
Alignment:
Q  182 aaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattcgttaaagataaaa 252  Q
    |||||||||| |||| ||||||||||| |||| | ||||||||||| ||||| ||||||| |||| ||||||    
T  2102 aaaaataaacgatattcattcattcaaattgataaagtacatcgatacaatacaaattcgctaaaaataaaa 2173  T

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Target: scaffold0288 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0288
Description:

Target: scaffold0288; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 228
Target Start/End: Complemental strand, 21063 - 21014
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgatc 228  Q
    ||||||||||||| || | ||||||||||| |||| ||||||||||||||    
T  21063 gacaaaaataaacgattttcattcattcaaattgatagagtacatcgatc 21014  T

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Target: scaffold0294 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 227
Target Start/End: Original strand, 3718 - 3766
Alignment:
Q  179 gacaaaaataaacaatatccattcattcaagttgacagagtacatcgat 227  Q
    ||||||| ||||| |||| ||||||||||| |||| |||||||||||||    
T  3718 gacaaaagtaaacgatattcattcattcaaattgatagagtacatcgat 3766  T

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Target: scaffold0001 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 180 - 239
Target Start/End: Original strand, 403900 - 403960
Alignment:
Q  180 acaaaaataaacaatatccattcattcaagttgacagagtacatcgat-caatataaattc 239  Q
    |||||||||||| |||| ||||||||||| || | ||||||||||||| ||||| ||||||    
T  403900 acaaaaataaacgatattcattcattcaaattaatagagtacatcgatacaatacaaattc 403960  T

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