View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13966_high_3 (Length: 321)

Name: NF13966_high_3
Description: NF13966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13966_high_3
NF13966_high_3
[»] chr6 (67 HSPs)
chr6 (1-285)||(12322697-12322985)
chr6 (3-165)||(56008-56170)
chr6 (3-166)||(24235526-24235690)
chr6 (6-164)||(22058177-22058336)
chr6 (21-170)||(24234323-24234473)
chr6 (3-166)||(12321560-12321724)
chr6 (3-164)||(33483696-33483857)
chr6 (3-164)||(54807-54967)
chr6 (3-165)||(34762181-34762343)
chr6 (8-164)||(22056482-22056639)
chr6 (16-162)||(24914440-24914587)
chr6 (165-274)||(1502730-1502840)
chr6 (165-278)||(12459296-12459410)
chr6 (166-285)||(9940702-9940822)
chr6 (21-94)||(6000584-6000657)
chr6 (224-285)||(32193756-32193817)
chr6 (165-278)||(3988721-3988835)
chr6 (165-285)||(13503821-13503945)
chr6 (51-151)||(33485019-33485120)
chr6 (112-170)||(3063489-3063546)
chr6 (106-164)||(14328646-14328703)
chr6 (106-164)||(14421656-14421713)
chr6 (165-274)||(13011325-13011432)
chr6 (224-285)||(234088-234150)
chr6 (224-274)||(16128044-16128094)
chr6 (172-214)||(32193936-32193978)
chr6 (224-276)||(10540513-10540566)
chr6 (108-169)||(18984006-18984067)
chr6 (226-285)||(1134979-1135039)
chr6 (165-271)||(17552224-17552332)
chr6 (112-168)||(32614547-32614603)
chr6 (165-278)||(577122-577237)
chr6 (106-169)||(14327364-14327426)
chr6 (106-169)||(14420374-14420436)
chr6 (168-215)||(20226201-20226248)
chr6 (168-215)||(22120185-22120232)
chr6 (106-160)||(3062194-3062248)
chr6 (106-164)||(12239901-12239959)
chr6 (165-274)||(17828348-17828458)
chr6 (108-166)||(18982912-18982970)
chr6 (165-215)||(21271380-21271430)
chr6 (16-81)||(5999793-5999858)
chr6 (106-151)||(21226958-21227003)
chr6 (225-285)||(29713444-29713505)
chr6 (106-163)||(31851993-31852049)
chr6 (106-169)||(21544125-21544188)
chr6 (106-169)||(29942444-29942505)
chr6 (113-163)||(1438616-1438666)
chr6 (106-167)||(2741546-2741605)
chr6 (165-215)||(12588650-12588700)
chr6 (106-147)||(308558-308599)
chr6 (106-151)||(2270805-2270850)
chr6 (165-214)||(4850483-4850532)
chr6 (165-214)||(8957894-8957943)
chr6 (165-214)||(8961414-8961463)
chr6 (106-151)||(10366414-10366459)
chr6 (27-92)||(11424830-11424895)
chr6 (166-215)||(13597932-13597981)
chr6 (229-277)||(17246678-17246727)
chr6 (165-214)||(18737065-18737114)
chr6 (106-151)||(21604354-21604399)
chr6 (106-151)||(24602643-24602688)
chr6 (106-170)||(308316-308380)
chr6 (106-146)||(6000672-6000711)
chr6 (106-169)||(17441397-17441458)
chr6 (106-146)||(28583564-28583604)
chr6 (106-166)||(31851756-31851815)
[»] chr2 (95 HSPs)
chr2 (8-166)||(23834579-23834737)
chr2 (3-166)||(18250785-18250949)
chr2 (3-163)||(16670500-16670660)
chr2 (6-165)||(18249630-18249789)
chr2 (6-165)||(1904307-1904467)
chr2 (3-165)||(1902929-1903092)
chr2 (3-166)||(23835669-23835831)
chr2 (3-94)||(16671699-16671790)
chr2 (16-164)||(38815002-38815150)
chr2 (3-165)||(38937404-38937566)
chr2 (3-164)||(7576325-7576486)
chr2 (8-164)||(44366867-44367024)
chr2 (3-94)||(5970652-5970743)
chr2 (27-166)||(7577696-7577836)
chr2 (3-94)||(44368280-44368371)
chr2 (12-94)||(41305952-41306034)
chr2 (16-168)||(21903919-21904073)
chr2 (21-168)||(38875984-38876133)
chr2 (7-94)||(38813646-38813733)
chr2 (3-94)||(38937000-38937091)
chr2 (28-164)||(38935945-38936080)
chr2 (165-278)||(37038747-37038861)
chr2 (27-87)||(22292556-22292616)
chr2 (3-146)||(19684220-19684363)
chr2 (224-285)||(18579221-18579282)
chr2 (21-94)||(38876935-38877008)
chr2 (165-284)||(10195730-10195850)
chr2 (106-165)||(22468224-22468283)
chr2 (106-165)||(22474445-22474504)
chr2 (176-285)||(18719421-18719531)
chr2 (165-274)||(33055956-33056066)
chr2 (27-145)||(22293464-22293582)
chr2 (106-163)||(22466982-22467039)
chr2 (106-170)||(28462493-28462557)
chr2 (225-278)||(7028851-7028904)
chr2 (225-278)||(7042225-7042278)
chr2 (21-94)||(36565306-36565379)
chr2 (165-285)||(4658209-4658332)
chr2 (21-88)||(10355234-10355301)
chr2 (27-94)||(39151237-39151304)
chr2 (224-285)||(4288748-4288810)
chr2 (185-285)||(12342147-12342249)
chr2 (110-168)||(19686183-19686240)
chr2 (224-285)||(38926660-38926722)
chr2 (165-284)||(8540093-8540214)
chr2 (180-285)||(36685734-36685839)
chr2 (21-145)||(11102079-11102204)
chr2 (224-276)||(19164420-19164472)
chr2 (241-285)||(27964425-27964469)
chr2 (27-94)||(5969799-5969866)
chr2 (167-214)||(11188229-11188276)
chr2 (106-165)||(25227822-25227881)
chr2 (106-145)||(45161381-45161420)
chr2 (112-174)||(85429-85491)
chr2 (224-285)||(441268-441330)
chr2 (165-211)||(34455821-34455867)
chr2 (21-94)||(11101165-11101237)
chr2 (106-151)||(31108359-31108404)
chr2 (21-94)||(31551598-31551671)
chr2 (224-276)||(7872814-7872866)
chr2 (106-166)||(15749008-15749067)
chr2 (178-214)||(27726410-27726446)
chr2 (106-165)||(41305880-41305937)
chr2 (165-209)||(44712211-44712255)
chr2 (106-145)||(5969743-5969782)
chr2 (239-274)||(11188545-11188580)
chr2 (106-169)||(15747746-15747808)
chr2 (224-278)||(29396717-29396772)
chr2 (106-165)||(30371384-30371442)
chr2 (106-165)||(34635943-34636001)
chr2 (106-165)||(34831490-34831549)
chr2 (224-271)||(43480907-43480954)
chr2 (106-164)||(33218643-33218701)
chr2 (106-168)||(44241093-44241154)
chr2 (106-164)||(44242355-44242412)
chr2 (224-285)||(45081937-45081999)
chr2 (116-164)||(5970764-5970810)
chr2 (49-94)||(10355078-10355123)
chr2 (224-285)||(11132605-11132666)
chr2 (240-285)||(12566034-12566079)
chr2 (165-214)||(14833737-14833786)
chr2 (117-166)||(15481487-15481536)
chr2 (133-166)||(18555574-18555607)
chr2 (165-214)||(27964202-27964251)
chr2 (108-165)||(31551908-31551965)
chr2 (21-94)||(31551976-31552048)
chr2 (165-214)||(35799318-35799367)
chr2 (133-170)||(45323919-45323956)
chr2 (106-146)||(8238006-8238046)
chr2 (106-166)||(15808723-15808783)
chr2 (106-166)||(17328090-17328149)
chr2 (106-146)||(28141705-28141745)
chr2 (240-276)||(32254645-32254681)
chr2 (117-165)||(38877032-38877079)
chr2 (106-170)||(40307651-40307715)
[»] chr1 (100 HSPs)
chr1 (1-165)||(23322503-23322668)
chr1 (3-165)||(23321262-23321425)
chr1 (3-165)||(9442885-9443048)
chr1 (27-170)||(43635829-43635970)
chr1 (7-94)||(2274562-2274649)
chr1 (12-94)||(6077010-6077092)
chr1 (16-166)||(9441565-9441716)
chr1 (8-166)||(14626679-14626838)
chr1 (9-94)||(2273570-2273655)
chr1 (3-166)||(14625368-14625531)
chr1 (1-84)||(27547406-27547489)
chr1 (21-161)||(5560876-5561015)
chr1 (12-141)||(51903383-51903513)
chr1 (3-165)||(8928814-8928977)
chr1 (165-285)||(27209043-27209164)
chr1 (16-164)||(52084734-52084884)
chr1 (165-285)||(29567950-29568071)
chr1 (165-274)||(25560848-25560958)
chr1 (165-285)||(31699265-31699386)
chr1 (21-86)||(44312046-44312111)
chr1 (165-284)||(8894991-8895111)
chr1 (28-145)||(13917192-13917309)
chr1 (225-285)||(46554852-46554912)
chr1 (27-146)||(8930267-8930386)
chr1 (165-282)||(18794518-18794636)
chr1 (165-285)||(26595045-26595166)
chr1 (106-165)||(1826434-1826493)
chr1 (106-169)||(26097027-26097089)
chr1 (106-165)||(33667632-33667691)
chr1 (113-164)||(52083580-52083631)
chr1 (16-94)||(37194399-37194476)
chr1 (107-161)||(40247381-40247435)
chr1 (21-168)||(13916088-13916234)
chr1 (21-94)||(37193548-37193621)
chr1 (106-163)||(47146368-47146425)
chr1 (106-162)||(1825296-1825351)
chr1 (165-213)||(7191182-7191230)
chr1 (106-166)||(33934635-33934695)
chr1 (106-165)||(25600929-25600988)
chr1 (106-165)||(26095813-26095871)
chr1 (108-167)||(44754604-44754663)
chr1 (6-85)||(52083630-52083708)
chr1 (106-164)||(20132381-20132439)
chr1 (224-285)||(49468746-49468808)
chr1 (106-163)||(13902066-13902122)
chr1 (106-151)||(24730203-24730248)
chr1 (165-214)||(28538331-28538380)
chr1 (106-170)||(14978709-14978772)
chr1 (226-285)||(48025291-48025351)
chr1 (106-169)||(15961741-15961804)
chr1 (106-165)||(16785721-16785779)
chr1 (224-278)||(26755280-26755335)
chr1 (27-94)||(30536437-30536504)
chr1 (106-165)||(32131903-32131961)
chr1 (106-165)||(36343153-36343212)
chr1 (168-214)||(5105-5151)
chr1 (224-285)||(9915497-9915559)
chr1 (224-285)||(15823088-15823150)
chr1 (239-285)||(16757245-16757291)
chr1 (106-164)||(31648075-31648133)
chr1 (27-145)||(38741493-38741612)
chr1 (239-285)||(39477759-39477805)
chr1 (106-164)||(51470129-51470186)
chr1 (109-170)||(24545451-24545511)
chr1 (29-94)||(44311277-44311342)
chr1 (106-166)||(47145144-47145205)
chr1 (117-166)||(50105407-50105456)
chr1 (106-167)||(50721926-50721987)
chr1 (107-151)||(4487551-4487595)
chr1 (27-87)||(4487617-4487677)
chr1 (165-276)||(8989615-8989727)
chr1 (114-166)||(13903379-13903430)
chr1 (165-213)||(16757174-16757222)
chr1 (106-170)||(32130638-32130702)
chr1 (106-145)||(7780221-7780260)
chr1 (106-165)||(8984852-8984911)
chr1 (239-285)||(24611570-24611617)
chr1 (224-285)||(50094283-50094346)
chr1 (176-214)||(5225812-5225850)
chr1 (224-285)||(10842834-10842896)
chr1 (106-168)||(12277453-12277515)
chr1 (224-285)||(32806973-32807035)
chr1 (165-215)||(38947719-38947769)
chr1 (224-285)||(46286853-46286915)
chr1 (106-164)||(49201385-49201442)
chr1 (239-285)||(49900808-49900854)
chr1 (106-167)||(8620193-8620253)
chr1 (165-214)||(14373399-14373448)
chr1 (117-166)||(15790483-15790532)
chr1 (106-151)||(16786148-16786193)
chr1 (106-151)||(24730069-24730114)
chr1 (165-214)||(33694398-33694447)
chr1 (165-214)||(34032066-34032115)
chr1 (165-210)||(44557045-44557090)
chr1 (165-214)||(50249426-50249475)
chr1 (106-170)||(4646751-4646814)
chr1 (106-166)||(26190728-26190788)
chr1 (131-167)||(27794355-27794391)
chr1 (106-146)||(33645031-33645071)
chr1 (106-146)||(44312130-44312170)
[»] chr4 (114 HSPs)
chr4 (3-166)||(50881319-50881481)
chr4 (3-165)||(55500300-55500464)
chr4 (6-161)||(34741292-34741448)
chr4 (3-165)||(34739887-34740050)
chr4 (3-166)||(29249605-29249769)
chr4 (3-94)||(55499321-55499412)
chr4 (6-164)||(20963598-20963757)
chr4 (12-166)||(54554381-54554534)
chr4 (21-164)||(12566852-12566996)
chr4 (3-166)||(20962192-20962355)
chr4 (16-170)||(29248236-29248390)
chr4 (3-161)||(51752686-51752843)
chr4 (165-285)||(10573136-10573257)
chr4 (21-165)||(17695886-17696031)
chr4 (33-92)||(40479442-40479501)
chr4 (12-163)||(49630502-49630651)
chr4 (165-285)||(47817792-47817914)
chr4 (21-94)||(43537521-43537594)
chr4 (27-165)||(15695096-15695237)
chr4 (168-285)||(30261313-30261431)
chr4 (165-278)||(52162165-52162279)
chr4 (21-165)||(50879908-50880051)
chr4 (51-170)||(21994321-21994438)
chr4 (225-285)||(40345389-40345450)
chr4 (165-285)||(50203128-50203249)
chr4 (185-285)||(1819616-1819718)
chr4 (106-164)||(9410282-9410340)
chr4 (107-165)||(21798331-21798389)
chr4 (185-285)||(27653728-27653830)
chr4 (106-164)||(34027194-34027251)
chr4 (224-285)||(37654463-37654525)
chr4 (21-91)||(46427160-46427230)
chr4 (106-164)||(54354190-54354248)
chr4 (106-164)||(54555351-54555408)
chr4 (165-285)||(11364280-11364401)
chr4 (106-163)||(13334823-13334880)
chr4 (16-93)||(37600875-37600952)
chr4 (165-285)||(47458368-47458488)
chr4 (167-285)||(8971096-8971216)
chr4 (226-278)||(25123770-25123822)
chr4 (165-213)||(41496332-41496380)
chr4 (22-94)||(43537752-43537824)
chr4 (106-166)||(43860913-43860972)
chr4 (27-94)||(2438322-2438389)
chr4 (27-94)||(7533660-7533727)
chr4 (106-165)||(17289741-17289800)
chr4 (224-278)||(20448100-20448155)
chr4 (11-94)||(20985949-20986032)
chr4 (239-285)||(620234-620280)
chr4 (165-262)||(19451186-19451284)
chr4 (224-285)||(19878702-19878764)
chr4 (224-285)||(28734652-28734714)
chr4 (224-285)||(44571906-44571968)
chr4 (224-285)||(45043629-45043691)
chr4 (165-285)||(45839691-45839813)
chr4 (224-285)||(52848095-52848157)
chr4 (224-285)||(52957831-52957893)
chr4 (224-285)||(56373616-56373680)
chr4 (106-167)||(4432987-4433048)
chr4 (106-163)||(9136404-9136460)
chr4 (244-285)||(18053034-18053075)
chr4 (106-167)||(18320696-18320756)
chr4 (106-167)||(18454189-18454250)
chr4 (112-165)||(34025913-34025966)
chr4 (181-285)||(44868249-44868354)
chr4 (166-274)||(46392045-46392153)
chr4 (53-94)||(51754144-51754185)
chr4 (224-284)||(53814538-53814599)
chr4 (165-213)||(7905988-7906036)
chr4 (106-170)||(49166639-49166703)
chr4 (110-166)||(51162075-51162131)
chr4 (106-146)||(51164020-51164060)
chr4 (3-87)||(54555245-54555329)
chr4 (106-165)||(5401760-5401819)
chr4 (27-94)||(7535347-7535414)
chr4 (25-88)||(9410076-9410139)
chr4 (27-94)||(15694531-15694597)
chr4 (106-165)||(21246475-21246534)
chr4 (122-169)||(45900523-45900570)
chr4 (224-278)||(49089524-49089579)
chr4 (106-164)||(550673-550730)
chr4 (165-215)||(620157-620207)
chr4 (224-285)||(2493156-2493218)
chr4 (106-164)||(7272266-7272324)
chr4 (131-165)||(18454454-18454488)
chr4 (106-164)||(19875970-19876028)
chr4 (110-164)||(21780359-21780413)
chr4 (106-168)||(24215741-24215802)
chr4 (224-285)||(29519566-29519628)
chr4 (165-285)||(34413528-34413650)
chr4 (224-285)||(49080518-49080580)
chr4 (106-164)||(50138488-50138545)
chr4 (122-167)||(145210-145255)
chr4 (165-214)||(4505452-4505501)
chr4 (225-278)||(6991305-6991358)
chr4 (106-151)||(13910851-13910896)
chr4 (106-147)||(15522715-15522756)
chr4 (131-176)||(35539805-35539849)
chr4 (131-163)||(468216-468248)
chr4 (107-151)||(4812577-4812621)
chr4 (106-146)||(14183628-14183668)
chr4 (226-285)||(18430043-18430103)
chr4 (106-146)||(20612983-20613023)
chr4 (106-166)||(21780120-21780178)
chr4 (106-166)||(22272928-22272987)
chr4 (106-166)||(22853960-22854020)
chr4 (106-146)||(31110483-31110523)
chr4 (224-272)||(44650955-44651003)
chr4 (54-94)||(46426171-46426211)
chr4 (106-166)||(48029413-48029471)
chr4 (106-166)||(49166962-49167022)
chr4 (106-166)||(54053567-54053627)
chr4 (106-166)||(55499248-55499308)
chr4 (182-214)||(56555731-56555763)
[»] scaffold0210 (2 HSPs)
scaffold0210 (3-170)||(4701-4869)
scaffold0210 (3-164)||(5788-5953)
[»] chr3 (109 HSPs)
chr3 (3-166)||(15086220-15086384)
chr3 (3-167)||(10616667-10616834)
chr3 (3-166)||(22256200-22256364)
chr3 (3-165)||(46597404-46597566)
chr3 (3-166)||(37977405-37977565)
chr3 (6-163)||(10615276-10615433)
chr3 (23-165)||(38843466-38843608)
chr3 (28-164)||(46610009-46610145)
chr3 (21-170)||(28208059-28208208)
chr3 (165-274)||(36844717-36844827)
chr3 (3-146)||(51116229-51116372)
chr3 (165-285)||(19373640-19373761)
chr3 (165-277)||(38141012-38141125)
chr3 (133-214)||(40717613-40717694)
chr3 (29-165)||(28206981-28207113)
chr3 (165-278)||(30315370-30315485)
chr3 (55-167)||(37975966-37976078)
chr3 (165-278)||(42072046-42072160)
chr3 (106-169)||(18142197-18142259)
chr3 (27-164)||(22257254-22257390)
chr3 (106-168)||(18704949-18705011)
chr3 (27-145)||(16386511-16386629)
chr3 (27-145)||(24842840-24842958)
chr3 (165-285)||(30934784-30934905)
chr3 (106-162)||(48044276-48044331)
chr3 (14-94)||(48288268-48288348)
chr3 (27-94)||(27315264-27315331)
chr3 (106-164)||(11360347-11360405)
chr3 (106-168)||(18140936-18140997)
chr3 (227-285)||(40487882-40487940)
chr3 (224-285)||(45213756-45213818)
chr3 (185-285)||(51398064-51398166)
chr3 (110-164)||(54567747-54567800)
chr3 (21-94)||(2011126-2011199)
chr3 (106-163)||(4218866-4218923)
chr3 (106-167)||(5205113-5205174)
chr3 (21-94)||(43930714-43930787)
chr3 (224-278)||(2458068-2458124)
chr3 (106-170)||(5205354-5205418)
chr3 (27-166)||(23539260-23539401)
chr3 (106-170)||(24729630-24729694)
chr3 (106-166)||(51252284-51252344)
chr3 (27-94)||(15093633-15093700)
chr3 (106-168)||(7248861-7248922)
chr3 (106-164)||(8355567-8355624)
chr3 (165-274)||(9189410-9189520)
chr3 (106-164)||(14824750-14824808)
chr3 (106-168)||(24909376-24909437)
chr3 (185-285)||(30431174-30431276)
chr3 (224-285)||(38363845-38363907)
chr3 (165-215)||(42886864-42886914)
chr3 (21-86)||(2011874-2011939)
chr3 (225-285)||(3152841-3152902)
chr3 (244-285)||(4392250-4392291)
chr3 (225-285)||(11393599-11393660)
chr3 (112-165)||(19111263-19111316)
chr3 (16-93)||(24528471-24528548)
chr3 (106-163)||(27521521-27521578)
chr3 (224-276)||(38016437-38016490)
chr3 (21-94)||(43929977-43930050)
chr3 (165-214)||(45460782-45460831)
chr3 (21-151)||(51386331-51386461)
chr3 (21-86)||(52396361-52396426)
chr3 (106-166)||(31835841-31835900)
chr3 (224-283)||(31853596-31853656)
chr3 (106-146)||(45291437-45291477)
chr3 (225-285)||(48901774-48901834)
chr3 (225-285)||(48903340-48903400)
chr3 (3-83)||(54439218-54439298)
chr3 (106-169)||(54566507-54566568)
chr3 (224-278)||(23525350-23525405)
chr3 (178-285)||(27067662-27067768)
chr3 (106-165)||(30586161-30586220)
chr3 (106-145)||(34062338-34062377)
chr3 (27-94)||(46596165-46596232)
chr3 (224-278)||(47895378-47895433)
chr3 (106-164)||(7118087-7118145)
chr3 (112-146)||(12210045-12210079)
chr3 (106-144)||(29184981-29185019)
chr3 (106-164)||(30586398-30586456)
chr3 (165-199)||(30680798-30680832)
chr3 (224-285)||(35557792-35557854)
chr3 (224-285)||(50088350-50088412)
chr3 (165-214)||(3985977-3986026)
chr3 (106-151)||(12072864-12072908)
chr3 (106-151)||(15096537-15096582)
chr3 (106-151)||(16308118-16308163)
chr3 (106-151)||(18945812-18945857)
chr3 (165-214)||(19115502-19115551)
chr3 (106-151)||(21655091-21655136)
chr3 (225-274)||(22857155-22857204)
chr3 (106-151)||(25924054-25924099)
chr3 (131-164)||(27432682-27432715)
chr3 (224-284)||(33194065-33194126)
chr3 (106-151)||(33887084-33887129)
chr3 (106-151)||(44512485-44512530)
chr3 (106-170)||(300485-300549)
chr3 (106-174)||(3548356-3548423)
chr3 (182-214)||(4759406-4759438)
chr3 (106-170)||(9650105-9650169)
chr3 (106-166)||(11359455-11359514)
chr3 (113-165)||(12066228-12066279)
chr3 (106-166)||(13003896-13003956)
chr3 (106-146)||(14826075-14826115)
chr3 (106-146)||(15093714-15093754)
chr3 (106-165)||(27432820-27432880)
chr3 (110-161)||(31173589-31173638)
chr3 (106-166)||(49265292-49265350)
chr3 (106-165)||(49872712-49872772)
[»] chr7 (98 HSPs)
chr7 (3-166)||(9554155-9554319)
chr7 (11-166)||(11056727-11056886)
chr7 (3-166)||(34158056-34158219)
chr7 (3-170)||(9553394-9553562)
chr7 (3-164)||(17764595-17764757)
chr7 (3-94)||(25776401-25776492)
chr7 (16-165)||(17763335-17763485)
chr7 (3-94)||(48170157-48170248)
chr7 (12-94)||(33767294-33767376)
chr7 (165-274)||(21819348-21819458)
chr7 (165-285)||(40339512-40339634)
chr7 (21-166)||(1831894-1832038)
chr7 (167-285)||(29636204-29636323)
chr7 (106-168)||(1589381-1589443)
chr7 (165-285)||(1031209-1031330)
chr7 (165-285)||(10476190-10476311)
chr7 (165-276)||(28289277-28289390)
chr7 (106-166)||(5219036-5219096)
chr7 (38-94)||(8174955-8175011)
chr7 (106-166)||(48168848-48168907)
chr7 (106-165)||(24434906-24434965)
chr7 (228-278)||(8604036-8604086)
chr7 (110-168)||(24757995-24758053)
chr7 (110-169)||(21237349-21237407)
chr7 (224-285)||(13405162-13405224)
chr7 (227-285)||(30312512-30312570)
chr7 (224-285)||(35777873-35777935)
chr7 (106-164)||(45865651-45865709)
chr7 (109-166)||(1594127-1594183)
chr7 (224-285)||(24133166-24133227)
chr7 (225-285)||(31418549-31418610)
chr7 (224-285)||(40753465-40753525)
chr7 (106-167)||(42509038-42509098)
chr7 (106-166)||(8175970-8176030)
chr7 (106-170)||(13286865-13286929)
chr7 (27-94)||(24436305-24436372)
chr7 (27-94)||(1830882-1830949)
chr7 (112-167)||(23161097-23161152)
chr7 (27-94)||(35891077-35891144)
chr7 (185-278)||(37815785-37815880)
chr7 (224-285)||(1742045-1742107)
chr7 (225-275)||(7759324-7759374)
chr7 (165-215)||(34012582-34012632)
chr7 (224-285)||(42879969-42880031)
chr7 (165-278)||(48843613-48843730)
chr7 (106-151)||(10659960-10660005)
chr7 (106-147)||(11058170-11058211)
chr7 (21-94)||(13771631-13771704)
chr7 (27-145)||(17237346-17237464)
chr7 (165-214)||(24780294-24780343)
chr7 (241-278)||(33682590-33682627)
chr7 (244-285)||(34012215-34012256)
chr7 (125-165)||(1676411-1676451)
chr7 (106-166)||(12814592-12814652)
chr7 (106-166)||(48945182-48945241)
chr7 (106-165)||(1492759-1492818)
chr7 (165-200)||(4268793-4268828)
chr7 (106-169)||(13772962-13773025)
chr7 (118-165)||(15037417-15037464)
chr7 (27-94)||(17238206-17238273)
chr7 (165-215)||(18270693-18270743)
chr7 (117-168)||(19272460-19272510)
chr7 (106-165)||(20041135-20041194)
chr7 (224-278)||(22298057-22298112)
chr7 (226-277)||(31196632-31196683)
chr7 (27-94)||(31433559-31433626)
chr7 (27-94)||(37413789-37413856)
chr7 (131-166)||(38192960-38192995)
chr7 (179-214)||(45499814-45499849)
chr7 (27-86)||(47637794-47637853)
chr7 (106-164)||(13279417-13279474)
chr7 (239-285)||(33939785-33939831)
chr7 (224-285)||(45948665-45948727)
chr7 (165-215)||(47187777-47187827)
chr7 (21-75)||(48168915-48168969)
chr7 (106-167)||(5217761-5217822)
chr7 (165-214)||(6563394-6563443)
chr7 (165-210)||(7335411-7335456)
chr7 (115-160)||(8174888-8174932)
chr7 (29-94)||(9113345-9113410)
chr7 (165-214)||(12983130-12983179)
chr7 (165-214)||(18292451-18292500)
chr7 (224-285)||(19105037-19105098)
chr7 (106-151)||(22335519-22335563)
chr7 (106-151)||(24204981-24205026)
chr7 (106-151)||(24205203-24205248)
chr7 (65-94)||(24434982-24435011)
chr7 (110-151)||(28157036-28157077)
chr7 (181-214)||(42286024-42286057)
chr7 (106-147)||(46459000-46459041)
chr7 (165-213)||(12977672-12977720)
chr7 (133-165)||(13797415-13797447)
chr7 (106-166)||(14187911-14187971)
chr7 (106-146)||(19336060-19336100)
chr7 (166-214)||(21752088-21752136)
chr7 (106-158)||(24204818-24204870)
chr7 (106-166)||(24555702-24555762)
chr7 (110-166)||(33757408-33757463)
[»] chr8 (84 HSPs)
chr8 (3-165)||(39809982-39810145)
chr8 (3-165)||(1601672-1601832)
chr8 (3-166)||(27163114-27163278)
chr8 (6-168)||(27164557-27164719)
chr8 (3-165)||(1601149-1601312)
chr8 (16-164)||(42348961-42349109)
chr8 (15-164)||(1600077-1600224)
chr8 (3-94)||(1602794-1602885)
chr8 (3-166)||(42350073-42350237)
chr8 (16-164)||(39808649-39808796)
chr8 (21-161)||(3252167-3252306)
chr8 (24-94)||(39913851-39913921)
chr8 (224-285)||(13367986-13368047)
chr8 (224-285)||(39463313-39463374)
chr8 (165-285)||(34156589-34156710)
chr8 (22-170)||(28575027-28575175)
chr8 (165-276)||(40399855-40399967)
chr8 (165-285)||(15750307-15750432)
chr8 (110-165)||(31985010-31985065)
chr8 (106-165)||(39513866-39513924)
chr8 (21-94)||(28561933-28562006)
chr8 (21-94)||(28567431-28567504)
chr8 (21-94)||(28574609-28574682)
chr8 (178-276)||(6374476-6374575)
chr8 (106-164)||(31986228-31986287)
chr8 (106-164)||(2270291-2270348)
chr8 (106-164)||(6819195-6819253)
chr8 (224-285)||(19574441-19574503)
chr8 (165-285)||(34796659-34796777)
chr8 (106-168)||(40702010-40702071)
chr8 (224-274)||(45358932-45358982)
chr8 (21-94)||(5704444-5704517)
chr8 (27-145)||(16434468-16434586)
chr8 (106-163)||(34901503-34901559)
chr8 (169-268)||(514948-515048)
chr8 (25-161)||(5703055-5703192)
chr8 (106-170)||(11424336-11424400)
chr8 (106-166)||(27543409-27543468)
chr8 (106-162)||(34902737-34902793)
chr8 (108-164)||(37403461-37403517)
chr8 (113-164)||(2269042-2269093)
chr8 (27-94)||(16432681-16432748)
chr8 (27-94)||(21397802-21397869)
chr8 (27-94)||(21792295-21792362)
chr8 (239-285)||(5295459-5295505)
chr8 (224-277)||(9880538-9880592)
chr8 (185-285)||(31899245-31899347)
chr8 (165-274)||(42179160-42179270)
chr8 (165-214)||(9812299-9812348)
chr8 (165-214)||(13496364-13496413)
chr8 (133-170)||(24970957-24970994)
chr8 (165-214)||(41679438-41679487)
chr8 (165-268)||(14234193-14234297)
chr8 (51-94)||(6105626-6105669)
chr8 (239-285)||(19438290-19438337)
chr8 (106-169)||(29309560-29309622)
chr8 (27-94)||(32901497-32901564)
chr8 (224-285)||(4760596-4760657)
chr8 (224-285)||(4989532-4989594)
chr8 (117-167)||(6820092-6820142)
chr8 (132-166)||(24971203-24971237)
chr8 (224-285)||(39698703-39698765)
chr8 (106-164)||(41565270-41565328)
chr8 (106-151)||(5160499-5160544)
chr8 (133-166)||(7988790-7988823)
chr8 (106-151)||(9768304-9768349)
chr8 (106-167)||(12478570-12478631)
chr8 (241-274)||(13496300-13496333)
chr8 (165-214)||(15160434-15160483)
chr8 (106-151)||(20076384-20076429)
chr8 (248-285)||(29312255-29312292)
chr8 (131-168)||(30112919-30112956)
chr8 (110-151)||(31343377-31343418)
chr8 (106-151)||(37611481-37611526)
chr8 (106-151)||(45530738-45530783)
chr8 (106-174)||(3912246-3912313)
chr8 (27-83)||(6146444-6146500)
chr8 (106-166)||(11830493-11830553)
chr8 (239-275)||(15227631-15227667)
chr8 (106-146)||(25653721-25653761)
chr8 (118-146)||(28561451-28561479)
chr8 (118-146)||(28566949-28566977)
chr8 (106-146)||(31343602-31343642)
chr8 (106-146)||(41708845-41708885)
[»] scaffold0040 (2 HSPs)
scaffold0040 (3-165)||(65938-66102)
scaffold0040 (27-164)||(64503-64640)
[»] chr5 (86 HSPs)
chr5 (3-170)||(11956133-11956301)
chr5 (3-170)||(15060157-15060325)
chr5 (6-165)||(41064143-41064303)
chr5 (6-165)||(11957547-11957707)
chr5 (3-169)||(41065552-41065719)
chr5 (16-164)||(21776815-21776964)
chr5 (12-164)||(10012712-10012863)
chr5 (6-165)||(15061722-15061881)
chr5 (22-166)||(15616414-15616559)
chr5 (3-94)||(29520205-29520296)
chr5 (3-94)||(29521325-29521416)
chr5 (3-166)||(8367894-8368056)
chr5 (3-165)||(30798474-30798636)
chr5 (3-174)||(15615093-15615264)
chr5 (3-94)||(40434302-40434392)
chr5 (3-165)||(11439695-11439855)
chr5 (3-140)||(21775485-21775623)
chr5 (21-94)||(40434546-40434619)
chr5 (16-164)||(30796579-30796727)
chr5 (165-285)||(11977642-11977763)
chr5 (165-285)||(34534413-34534534)
chr5 (110-170)||(19599964-19600024)
chr5 (11-86)||(42003990-42004065)
chr5 (27-146)||(37274765-37274883)
chr5 (168-275)||(15166992-15167100)
chr5 (180-278)||(36164948-36165047)
chr5 (224-274)||(14161938-14161988)
chr5 (106-164)||(35599312-35599370)
chr5 (106-167)||(19601266-19601327)
chr5 (106-163)||(35600538-35600595)
chr5 (106-166)||(9751676-9751735)
chr5 (106-165)||(9750446-9750505)
chr5 (27-146)||(11438356-11438476)
chr5 (224-285)||(4425028-4425090)
chr5 (106-164)||(6055176-6055234)
chr5 (224-285)||(34446064-34446126)
chr5 (165-285)||(843072-843193)
chr5 (106-143)||(13948582-13948619)
chr5 (106-163)||(28819537-28819593)
chr5 (33-94)||(33750988-33751049)
chr5 (165-214)||(38362115-38362164)
chr5 (225-285)||(42661978-42662039)
chr5 (53-163)||(10011619-10011725)
chr5 (165-213)||(13974401-13974449)
chr5 (165-284)||(38369927-38370047)
chr5 (106-165)||(711236-711294)
chr5 (117-168)||(5699751-5699802)
chr5 (106-145)||(11890099-11890138)
chr5 (106-168)||(28820555-28820618)
chr5 (27-94)||(40434057-40434123)
chr5 (185-278)||(42104060-42104155)
chr5 (165-274)||(1309336-1309446)
chr5 (224-285)||(2729823-2729885)
chr5 (224-285)||(3306046-3306108)
chr5 (185-285)||(39566237-39566339)
chr5 (106-163)||(9227084-9227141)
chr5 (106-151)||(9673129-9673174)
chr5 (229-285)||(13761611-13761668)
chr5 (248-285)||(21195433-21195470)
chr5 (106-163)||(33658871-33658928)
chr5 (106-166)||(711458-711518)
chr5 (176-208)||(28591611-28591643)
chr5 (106-165)||(29321307-29321366)
chr5 (106-165)||(33659106-33659164)
chr5 (51-94)||(33847181-33847224)
chr5 (131-166)||(39153414-39153449)
chr5 (165-215)||(7317143-7317193)
chr5 (165-262)||(7736451-7736549)
chr5 (224-274)||(21634177-21634226)
chr5 (224-274)||(21642424-21642473)
chr5 (106-164)||(22756382-22756440)
chr5 (106-164)||(39418951-39419009)
chr5 (251-285)||(41645294-41645328)
chr5 (224-276)||(14005955-14006008)
chr5 (106-159)||(16504946-16504999)
chr5 (117-166)||(18229747-18229796)
chr5 (106-139)||(26888457-26888490)
chr5 (131-164)||(33053071-33053104)
chr5 (165-214)||(35765888-35765937)
chr5 (106-170)||(12496528-12496592)
chr5 (106-165)||(15395543-15395599)
chr5 (106-142)||(25453873-25453909)
chr5 (106-166)||(26034843-26034902)
chr5 (106-170)||(29754042-29754106)
chr5 (106-166)||(38482316-38482375)
chr5 (242-285)||(39335259-39335303)
[»] scaffold0228 (3 HSPs)
scaffold0228 (6-170)||(8076-8241)
scaffold0228 (6-170)||(15658-15823)
scaffold0228 (6-170)||(25610-25775)
[»] scaffold0176 (1 HSPs)
scaffold0176 (16-170)||(195-351)
[»] scaffold0250 (2 HSPs)
scaffold0250 (3-166)||(10078-10241)
scaffold0250 (27-165)||(11488-11627)
[»] scaffold0246 (2 HSPs)
scaffold0246 (3-92)||(15947-16036)
scaffold0246 (33-92)||(17381-17440)
[»] scaffold0804 (1 HSPs)
scaffold0804 (8-166)||(2731-2890)
[»] scaffold0291 (1 HSPs)
scaffold0291 (21-94)||(20910-20983)
[»] scaffold0725 (2 HSPs)
scaffold0725 (106-173)||(4956-5024)
scaffold0725 (106-166)||(3912-3971)
[»] scaffold0227 (2 HSPs)
scaffold0227 (3-163)||(23685-23836)
scaffold0227 (27-164)||(24857-24995)
[»] scaffold0502 (1 HSPs)
scaffold0502 (168-284)||(552-669)
[»] scaffold0026 (1 HSPs)
scaffold0026 (167-285)||(4195-4314)
[»] scaffold0014 (2 HSPs)
scaffold0014 (110-165)||(227368-227423)
scaffold0014 (106-164)||(228586-228645)
[»] scaffold0983 (1 HSPs)
scaffold0983 (176-285)||(675-785)
[»] scaffold0129 (1 HSPs)
scaffold0129 (49-164)||(37333-37447)
[»] scaffold0039 (1 HSPs)
scaffold0039 (106-166)||(110407-110467)
[»] scaffold0112 (1 HSPs)
scaffold0112 (25-88)||(36138-36201)
[»] scaffold0093 (3 HSPs)
scaffold0093 (27-94)||(8967-9034)
scaffold0093 (27-83)||(2741-2797)
scaffold0093 (27-83)||(7364-7420)
[»] scaffold0565 (2 HSPs)
scaffold0565 (165-285)||(9932-10053)
scaffold0565 (224-285)||(9679-9740)
[»] scaffold0031 (1 HSPs)
scaffold0031 (106-166)||(2059-2119)
[»] scaffold1571 (1 HSPs)
scaffold1571 (27-94)||(116-183)
[»] scaffold1147 (1 HSPs)
scaffold1147 (27-94)||(2531-2598)
[»] scaffold0136 (3 HSPs)
scaffold0136 (106-165)||(35598-35656)
scaffold0136 (178-283)||(9600-9707)
scaffold0136 (106-170)||(636-699)
[»] scaffold0294 (1 HSPs)
scaffold0294 (224-285)||(3541-3603)
[»] scaffold0110 (1 HSPs)
scaffold0110 (224-285)||(24777-24839)
[»] scaffold0497 (1 HSPs)
scaffold0497 (27-145)||(1469-1587)
[»] scaffold0850 (2 HSPs)
scaffold0850 (26-94)||(1522-1590)
scaffold0850 (27-94)||(4564-4631)
[»] scaffold0300 (1 HSPs)
scaffold0300 (178-285)||(4619-4727)
[»] scaffold0079 (1 HSPs)
scaffold0079 (106-166)||(6808-6867)
[»] scaffold0769 (1 HSPs)
scaffold0769 (106-165)||(3913-3971)
[»] scaffold1797 (1 HSPs)
scaffold1797 (106-151)||(678-723)
[»] scaffold0430 (1 HSPs)
scaffold0430 (106-151)||(12497-12542)
[»] scaffold0192 (1 HSPs)
scaffold0192 (106-151)||(14221-14266)
[»] scaffold0182 (1 HSPs)
scaffold0182 (224-285)||(18292-18353)
[»] scaffold0013 (1 HSPs)
scaffold0013 (106-151)||(149619-149664)
[»] scaffold0010 (1 HSPs)
scaffold0010 (106-151)||(145341-145386)
[»] scaffold0009 (2 HSPs)
scaffold0009 (106-151)||(149999-150043)
scaffold0009 (106-151)||(150225-150270)
[»] scaffold0007 (1 HSPs)
scaffold0007 (108-169)||(14824-14885)
[»] scaffold0933 (1 HSPs)
scaffold0933 (106-146)||(2718-2758)
[»] scaffold0289 (1 HSPs)
scaffold0289 (106-146)||(9937-9977)
[»] scaffold0148 (1 HSPs)
scaffold0148 (106-169)||(34982-35044)
[»] scaffold0113 (1 HSPs)
scaffold0113 (106-162)||(28072-28128)
[»] scaffold0001 (1 HSPs)
scaffold0001 (106-146)||(53522-53562)


Alignment Details
Target: chr6 (Bit Score: 203; Significance: 1e-111; HSPs: 67)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 1 - 285
Target Start/End: Original strand, 12322697 - 12322985
Alignment:
Q  1 agaaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnn 100  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          
T  12322697 agaaagccatgtaagtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaa 12322796  T
Q  101 nnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaagaaatagagatgttattttaccaaattatc 200  Q
         ||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12322797 aaaaattacagggggcaaaatcaaaagtgccctatattacaggggggtaaagacctattaacccttaaaagaaatagagatgttattttaccaaattatc 12322896  T
Q  201 ctaattaactattga----nnnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||||||            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12322897 ctaattaactattgattttttttttttcattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 12322985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 56008 - 56170
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||            
T  56008 aaagccatgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaacgacggaatctaaaaaaaa 56107  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||||||||| ||||| |||||||||||||||||||| ||||||||| |||||||||||||    
T  56108 aaaattacaggggacaaaatcaaaagtgccctatattaca-gggggtaaagacctattaaccct 56170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 24235526 - 24235690
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||| ||||||            
T  24235526 aaagccatgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaaaataa 24235625  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  24235626 atttttacagggggcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccctt 24235690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 22058177 - 22058336
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| | ||||||||| ||||||||||||||||||||||||||||||||               
T  22058177 gccatgtaggtgccacatcatagattctgctgagtcatagggctcaaggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaagaa 22058276  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
     |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  22058277 tttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 22058336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 24234473 - 24234323
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaa 119  Q
    ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||           || ||||||||||||    
T  24234473 catcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggcaaa 24234374  T
Q  120 accaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  24234373 accaaaagtgtcctatattacaggggggtaaagacctattaacccttaaaa 24234323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 12321724 - 12321560
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    |||| |||||| ||||| |||||||||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||||||| |||||            
T  12321724 aaagtcatgtaggtgccacatcaaagattctgctaagtcaataggcttaaggggcaatcgtgaagaatcttcattttacaaggacgaaatctataaaaaa 12321625  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        ||||||| ||||||||||||||| ||||||||||||||||| |||| ||||||||||||||    
T  12321624 aaaattacaggaggcaaaaccaaaagtaccctatattacagggggataaagacctattaaccctt 12321560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 33483857 - 33483696
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||| ||||||||| | | | ||||||||||||||||||||||||||| |||||| ||||| ||||||||||||||||||||||||||             
T  33483857 aaagccacgtaagtgccacctaagagattctgctgagtcaatgggcttaggtggcaattgtgaataatcttcattttacaaggacggaatcaaatttttt 33483758  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
       |||||| ||||||||||||||||| |||||||||||||| |||||| ||||||||||||    
T  33483757 tttttacagagggcaaaaccaaaagtgtcctatattacagggtggtaaagacctattaaccc 33483696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 54967 - 54807
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| || || ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||            
T  54967 aaagccatgtaggtaccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaataatcttcattttacaaggacggaatctaatttttt 54868  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
        ||||||||| |||||||||||||| ||||||||||||| ||  ||| ||||||||||||    
T  54867 ttttttacaggggacaaaaccaaaagtgtcctatattacaggagg--aaagacctattaaccc 54807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 34762343 - 34762181
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||| ||||||||| | | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||            
T  34762343 aaagccacgtaagtgccacctaaaagattctgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacgaaatctataaaaaa 34762244  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        |||||||| ||||||||||||||||||||||||||| || |||||| |||||||| ||||    
T  34762243 aaatttacagggagcaaaaccaaaagtgccctatattaca-ggaggtaaagacctattagccct 34762181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 22056639 - 22056482
Alignment:
Q  8 catgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnt 106  Q
    |||||| ||||| ||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||||||            |    
T  22056639 catgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt 22056540  T
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  22056539 tacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 22056482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 162
Target Start/End: Complemental strand, 24914587 - 24914440
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  || |||||||||||||| ||||||||||||||||||||||||||||||||            |||||||||    
T  24914587 tgccacatcatagattctgctgagtcacaggacttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggg 24914488  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaac 162  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||    
T  24914487 gcaaaatcaaaagtgtcctatattacaggggggtaatgacctattaac 24914440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 1502730 - 1502840
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||| |         ||||||| |||| | |||| ||||||||||||||||||||    
T  1502730 ttaaaagaaatagagatgttattttaccaaattatcttaattaactattggtttgtttttcattaaataaaaaataatattttggaagtagtgtatatag 1502829  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  1502830 tattaattgaa 1502840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 12459296 - 12459410
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | |||| ||||||||||||||||||||||| ||||||||          |||||||||||| ||||||||||||||||| |||||||||    
T  12459296 ttaaaagaaagaaagatattattttaccaaattatcctaatcaactattggtctgtttttcattaaagaaaaaacaatactttggaagtaatgtatatag 12459395  T
Q  264 tattaattgaagggt 278  Q
    |||||||||||||||    
T  12459396 tattaattgaagggt 12459410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 285
Target Start/End: Complemental strand, 9940822 - 9940702
Alignment:
Q  166 taaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagt 264  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||||| |         |||||||||||| | |||| |||||||||||||| |||| |    
T  9940822 taaaagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtgtataat 9940723  T
Q  265 attaattgaagggtgcaattg 285  Q
    |||||||||||||| ||||||    
T  9940722 attaattgaagggtacaattg 9940702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 6000584 - 6000657
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||  |||| |||||||||||| ||||||||||| |||||||||||| |||||||    
T  6000584 catcaaagattctgctgagtcacagggcatagggggcaatcctgaagaatctttattttacaaggatggaatct 6000657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 32193817 - 32193756
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  32193817 cattaaagaaaagataatactttggaagtagtgtatatagtattaattgaagggtacaattg 32193756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 3988721 - 3988835
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaacta-ttgannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||| |||         |||||||||||| | |||||||| ||| |||| |||||||    
T  3988721 ttaaaagaaagagagatgttattttaccaaattatcataatcaactatttgtttgtttttcattaaagaaaaaataatacttttgaaatagtatatatag 3988820  T
Q  264 tattaattgaagggt 278  Q
    |||||||||||||||    
T  3988821 tattaattgaagggt 3988835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 13503821 - 13503945
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnncattaaag--aaaacacaatactttggaagtagtg--tata 260  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||         ||||||||  |||| | ||||||||| ||||||||  ||||    
T  13503821 ttaaaagaaagagaaatgttattttaccaaattatcctaataaactattgtttgtttttcattaaagaaaaaaaataatactttgaaagtagtgtatata 13503920  T
Q  261 tagtattaattgaagggtgcaattg 285  Q
    |||||||||||||||||| ||||||    
T  13503921 tagtattaattgaagggtacaattg 13503945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 51 - 151
Target Start/End: Original strand, 33485019 - 33485120
Alignment:
Q  51 agggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaaaccaaaagtgccctatattacaggggggta 149  Q
    ||||||||||| ||||||||||| |||||||||||||||||| |           || ||||||||||||||||||||| ||||||||||||||||||||    
T  33485019 agggggcaatcctgaagaatctttattttacaaggacggaattttaaaaaaaaaatttacagggggcaaaaccaaaagtaccctatattacaggggggta 33485118  T
Q  150 aa 151  Q
    ||    
T  33485119 aa 33485120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 112 - 170
Target Start/End: Original strand, 3063489 - 3063546
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  3063489 ggggcaaaaccaaaagtgacctatattaca-gggggtaaagacctattaacccttaaaa 3063546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 14328646 - 14328703
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  14328646 ttacagggggcaaaaccaaaagtgacctatattaca-gggggtaaagacctattaaccc 14328703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 14421656 - 14421713
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  14421656 ttacagggggcaaaaccaaaagtgacctatattaca-gggggtaaagacctattaaccc 14421713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 13011325 - 13011432
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactat-tgannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||  |         ||||||||||||   ||||||||| |||||||||||||||    
T  13011325 ttaaaagaaagagagatgttattttaccaaattatcttaatcaactatcggtttgtttttcattaaagaaaa---aatactttgaaagtagtgtatatag 13011421  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  13011422 tattaattgaa 13011432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 234150 - 234088
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  234150 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 234088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 16128044 - 16128094
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    |||||||||||| | |||||||| |||||||||||||||||||||||||||    
T  16128044 cattaaagaaaaaataatacttttgaagtagtgtatatagtattaattgaa 16128094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 172 - 214
Target Start/End: Complemental strand, 32193978 - 32193936
Alignment:
Q  172 aaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  32193978 aaatagagatgttattttaccaaattatcctaatcaactattg 32193936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 10540513 - 10540566
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagg 276  Q
    |||||||||||| | ||||||||||||||||||| |||||||||||||||||||    
T  10540513 cattaaagaaaaaataatactttggaagtagtgtaatatagtattaattgaagg 10540566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 18984006 - 18984067
Alignment:
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||| ||||||||||||| |||||||| |||| |||||||  ||||||||||||||||    
T  18984006 acaggggggaaaaccaaaagtgacctatattgcaggagggtaaaggcctattaacccttaaa 18984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 1135039 - 1134979
Alignment:
Q  226 ttaaagaaaacacaatactttggaagtagtgta-tatagtattaattgaagggtgcaattg 285  Q
    |||||||||| | |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  1135039 ttaaagaaaaaataatattttggaagtagtgtaatatagtattaattgaagggtacaattg 1134979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 17552224 - 17552332
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaag-aaaacacaatactttggaagtagtgtatata 262  Q
    |||||||||| |||||||| ||||||||||||||||||||| ||| ||| |         |||||||| |||| | |||| |||||||||||||||||||    
T  17552224 ttaaaagaaagagagatgtaattttaccaaattatcctaatcaacaattggtttgtttttcattaaagaaaaaaataatattttggaagtagtgtatata 17552323  T
Q  263 gtattaatt 271  Q
    |||||||||    
T  17552324 gtattaatt 17552332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 112 - 168
Target Start/End: Original strand, 32614547 - 32614603
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||||||||||| | ||||||||||||| |||||  |||||||||||||||    
T  32614547 ggggcaaaaccaaaagtgacatatattacaggggtgtaaaggcctattaacccttaa 32614603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 577237 - 577122
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacac-aatactttggaagtagtgtatata 262  Q
    |||||| ||| ||| |||||||||||| ||||||||||||| ||||||||          |||||||||||| |  |||| |||||||||||||||||||    
T  577237 ttaaaataaagagaaatgttattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttggaagtagtgtatata 577138  T
Q  263 gtattaattgaagggt 278  Q
     |||||||||||||||    
T  577137 atattaattgaagggt 577122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 14327426 - 14327364
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||  |||||||||| |||||    
T  14327426 ttacagggggcaaaaccaaaagtgacgtatattacag-ggggtaaaggcctattaacctttaaa 14327364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 14420436 - 14420374
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||||||||||||||||| | |||||||||| ||||||||  |||||||||| |||||    
T  14420436 ttacagggggcaaaaccaaaagtgacgtatattacag-ggggtaaaggcctattaacctttaaa 14420374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 20226201 - 20226248
Alignment:
Q  168 aaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  20226201 aaagaaagagagatgttattttaccaaattatactaatcaactattga 20226248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 215
Target Start/End: Original strand, 22120185 - 22120232
Alignment:
Q  168 aaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    ||||||| |||||||||||||||||||||||| ||||| |||||||||    
T  22120185 aaagaaagagagatgttattttaccaaattatactaatcaactattga 22120232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 160
Target Start/End: Complemental strand, 3062248 - 3062194
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctatta 160  Q
    |||||| ||||||||||||||||| |||||||||||| ||||||||  |||||||    
T  3062248 ttacagtgggcaaaaccaaaagtgacctatattacagaggggtaaaggcctatta 3062194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 12239901 - 12239959
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||  ||||||||||||| | |||||| |||||||||||| ||||||||||||    
T  12239901 ttacaggggagaaaaccaaaagtgacatatattgcaggggggtaaagacctattaaccc 12239959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 17828458 - 17828348
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | ||||||||||||||||||||||| |||| ||| ||||          ||||||||||||   ||||||||| ||| |||||||||||    
T  17828458 ttaaaagaaagaaagatgttattttaccaaattatcttaatcaaccattggtttgtttttcattaaagaaaaagtaatactttgaaagaagtgtatatag 17828359  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  17828358 tattaattgaa 17828348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 166
Target Start/End: Complemental strand, 18982970 - 18982912
Alignment:
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||| || |||||||||| |||||||| ||||||||||||  |||||||||||||    
T  18982970 acaggggggaacaccaaaagtgacctatattgcaggggggtaaaggcctattaaccctt 18982912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 21271380 - 21271430
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||| ||| |||||||||||||||||||| ||||||||| |||||||||    
T  21271380 ttaaaataaagagagatgttattttaccaaagtatcctaatcaactattga 21271430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 5999858 - 5999793
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttac 81  Q
    |||| ||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||| |||||||    
T  5999858 tgccacatcatagattctgctgagtcacagagctcagggggcaatcctgaagaatctttattttac 5999793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 21226958 - 21227003
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  21226958 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaa 21227003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 29713444 - 29713505
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  29713444 attaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattg 29713505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 31851993 - 31852049
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||| |||||| ||| || ||||||||||||||||||||| |||||||||||    
T  31851993 ttacaggggg-aaaaccgaaaatgacctatattacaggggggtaaagacctattaacc 31852049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 21544188 - 21544125
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||| ||||||  || || |||||||||||||||||||||   |||||||||||||||    
T  21544188 ttacagggggtaaaaccggaaatgacctatattacaggggggtaaaacactattaacccttaaa 21544125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 29942444 - 29942505
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||| ||||||| || || |||||||||||||||| |||| |||||||||||||||||    
T  29942444 ttacaggggg-aaaaccagaaatgacctatattacaggggg-taaagacctattaacccttaaa 29942505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 113 - 163
Target Start/End: Original strand, 1438616 - 1438666
Alignment:
Q  113 gggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    ||||||||| ||||||| | |||||||||| |||||||| |||||||||||    
T  1438616 gggcaaaacaaaaagtgacttatattacagaggggtaaaaacctattaacc 1438666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 2741605 - 2741546
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    ||||||||||||||||||||||||  |||||||| |  ||||||||| | ||||||||||||    
T  2741605 ttacagggggcaaaaccaaaagtgatctatattaaa--ggggtaaatgcatattaaccctta 2741546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 12588700 - 12588650
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||| |||||| |||||||||||||||||| |||  |||||||||    
T  12588700 ttaaaagaaagagagattttattttaccaaattatcttaaccaactattga 12588650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 308558 - 308599
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggggg 147  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  308558 ttacaggggggaaaaccaaaaatgacctatattacagggggg 308599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 2270805 - 2270850
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||||| || || |||||||||||||||||||||    
T  2270805 ttacaggggggaaaaccagaaatgacctatattacaggggggtaaa 2270850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 4850483 - 4850532
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  4850483 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 4850532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 8957943 - 8957894
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    ||||| |||| ||| ||||||| |||||||||||||||||| ||||||||    
T  8957943 ttaaatgaaagagatatgttatcttaccaaattatcctaatcaactattg 8957894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 8961414 - 8961463
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    ||||| |||| ||| ||||||| |||||||||||||||||| ||||||||    
T  8961414 ttaaatgaaagagatatgttatcttaccaaattatcctaatcaactattg 8961463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 10366459 - 10366414
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  10366459 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 10366414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 27 - 92
Target Start/End: Complemental strand, 11424895 - 11424830
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 92  Q
    |||||| |||||||||  ||  ||||||| ||||| ||||||||||| |||||||||||| |||||    
T  11424895 agattcagctgagtcataggagttaggggacaatcctgaagaatctttattttacaaggatggaat 11424830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 13597932 - 13597981
Alignment:
Q  166 taaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    ||||||||| |||  |||||||||||||||||||| | ||||||||||||    
T  13597932 taaaagaaagagaattgttattttaccaaattatctttattaactattga 13597981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 17246678 - 17246727
Alignment:
Q  229 aagaaaacacaatactttggaagtagtgt-atatagtattaattgaaggg 277  Q
    ||||||| | ||||||||||||||||||| | ||||||||||||||||||    
T  17246678 aagaaaaaataatactttggaagtagtgtaacatagtattaattgaaggg 17246727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 18737065 - 18737114
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| ||||| | || |||| |||||||||||||||||||||||    
T  18737065 ttaaaagaaacagagacgctaatttatcaaattatcctaattaactattg 18737114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 21604354 - 21604399
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  21604354 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 21604399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 24602643 - 24602688
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || ||||||||||| |||||||||    
T  24602643 ttacaggggggaaaaccaaaaatgacctatattacatgggggtaaa 24602688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 308380 - 308316
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| |||||||||| || | |||||||||||||| ||||   | ||||||||||||||    
T  308380 ttacaggggggaaaaccaaaaatgacatatattacagggggctaaagcaccattaacccttaaaa 308316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 6000672 - 6000711
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| |||||||||||||| |||||||||||||||    
T  6000672 ttacaggggg-aaaaccaaaagtgctctatattacaggggg 6000711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 17441458 - 17441397
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||| | |||||| ||| || |||||||||||||||  |||| |||||||||||||||||    
T  17441458 ttacagggtgtaaaaccgaaaatgacctatattacagggg--taaagacctattaacccttaaa 17441397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 28583604 - 28583564
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||  ||||||||||||||||||||||||| ||||    
T  28583604 ttacaggggcaaaaaccaaaagtgccctatattacacgggg 28583564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 31851815 - 31851756
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||| ||| || ||||||||||| |||| |||| ||||||||||||||    
T  31851815 ttacaggggggaaaaccgaaaatgacctatattaca-ggggataaagacctattaaccctt 31851756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 110; Significance: 2e-55; HSPs: 95)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 23834737 - 23834579
Alignment:
Q  8 catgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt 107  Q
    |||||| ||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||           ||    
T  23834737 catgtaggtgccacatcaaagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt 23834638  T
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23834637 acagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 23834579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 18250785 - 18250949
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||            
T  18250785 aaagccatgtaggtgccgcatcaaagattctgctgagtcaatgggcttagggaacaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaa 18250884  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        ||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||    
T  18250885 aaaattacaggaggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccctt 18250949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 16670660 - 16670500
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||            
T  16670660 aaagccatgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcattttacaatgacggaatctaaaaaaaa 16670561  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
        |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  16670560 aaaattacagggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 16670500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 18249789 - 18249630
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnn 105  Q
    |||||||| ||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||               
T  18249789 gccatgtaggtgtcacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacagaatctaaaaaaaaaat 18249690  T
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||| | |||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  18249689 ttacaggagacaaaaccaaaagtgccatatattacaagggggtaaagacctattaaccct 18249630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 1904307 - 1904467
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnn 105  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||               
T  1904307 gccatgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaatttttt 1904406  T
Q  106 tt-acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    || |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1904407 ttcacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 1904467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 1903092 - 1902929
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  1903092 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 1902993  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1902992 aattttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 1902929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 23835669 - 23835831
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||||||| ||||| |||||||||||| |||||||||||||||||||| | | |||||||||||||||||||||||||||||||||||             
T  23835669 aaagccatgtaggtgccacatcaaagattccgctgagtcaatgggcttaggagacgatcgtgaagaatcttcattttacaaggacggaatcgattttttt 23835768  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
       |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  23835769 tttttacagggggcaaaactaaaagtgccctatattaca-gggggtaaagacctattaaccctt 23835831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 16671699 - 16671790
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  16671699 aaagccatgtaggtgccacatcaaagattctgctgagtcaatgagcttagggggcaatcgtgaagaatcttcattttacaagaacggaatct 16671790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 38815002 - 38815150
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacaggggg 115  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||           |||||| |||    
T  38815002 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaattttttttttacagaggg 38815101  T
Q  116 caaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||| ||||||||||||| ||||| ||||||||||||    
T  38815102 caaaaccaaaagtgccttatattacaggggagtaaagacctattaaccc 38815150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 38937404 - 38937566
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| || || ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  38937404 aaagccatgtaggttccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaatttttt 38937503  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  38937504 ttttttatagggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 38937566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 3 - 164
Target Start/End: Complemental strand, 7576486 - 7576325
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||   |||| ||||| ||||| ||||||||||||||||||||||||||||||||            
T  7576486 aaagccatgtaggtgccacatcatagattctgctgagtcacatggctcagggg-caatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 7576388  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
        ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||    
T  7576387 tattttacagggggcaaaaccaaaagtgccctatattacagggggataaagacctattaaccc 7576325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 8 - 164
Target Start/End: Complemental strand, 44367024 - 44366867
Alignment:
Q  8 catgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnt 106  Q
    |||||| ||||| ||||| ||||||||||||||||  | ||| ||||||||||| ||||||||||||||||||||||||||||||||            |    
T  44367024 catgtaggtgccacatcatagattctgctgagtcacagagctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt 44366925  T
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||    
T  44366924 tacagggggcaaaaccaaaagtgccctatattacagggagttaaagacctattaaccc 44366867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 5970652 - 5970743
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||| ||||||||| | ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||    
T  5970652 aaagccacgtaagtgccacctcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaagaacggaatct 5970743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 27 - 166
Target Start/End: Original strand, 7577696 - 7577836
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaaaccaaa 125  Q
    ||||||||||||||||   |||| ||||||||||| ||| ||||||||||||||||||||||||||||           || |||||||| |||||||||    
T  7577696 agattctgctgagtcacaaggctcagggggcaatcttgatgaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggggtaaaaccaaa 7577795  T
Q  126 agtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  7577796 agtgccctatattacaggggggtaaagacctattaaccctt 7577836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 44368280 - 44368371
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  44368280 aaagcaatgtaggtgccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatct 44368371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 41306034 - 41305952
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||| ||||| ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||    
T  41306034 taagtgccacatcagagattctgctgagtcaatgggtttagggggcaatcgtgaagaagcttcattttacaaggacggaatct 41305952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 168
Target Start/End: Complemental strand, 21904073 - 21903919
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnnnnnnnttacaggg 113  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||||||||||||||             ||||||||    
T  21904073 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaatttacaggg 21903974  T
Q  114 ggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    || ||||||||||||||||||||||||||||| |||||  || ||||||||||||    
T  21903973 gggaaaaccaaaagtgccctatattacaggggtgtaaagccccattaacccttaa 21903919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 38876133 - 38875984
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnnnnnnnttacagggggcaa 118  Q
    ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||||||||||||||             |||||||||| ||    
T  38876133 catcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaatttacagggggaaa 38876034  T
Q  119 aaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||||||| |||||||||||||||||||||  |||||||| ||||||    
T  38876033 aaccaaaagtgtcctatattacaggggggtaaagccctattaatccttaa 38875984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 94
Target Start/End: Complemental strand, 38813733 - 38813646
Alignment:
Q  7 ccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||| ||||| ||||| ||||||||||||||||  ||||||||||||||||| |||||||| |||||||||||||||||||||||    
T  38813733 ccatgtaggtgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatattcattttacaaggacggaatct 38813646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 38937091 - 38937000
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| || || ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  38937091 aaagccatgtaggttccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 38937000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 38936080 - 38935945
Alignment:
Q  28 gattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            |||||| ||||||||||||||    
T  38936080 gattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagtgggcaaaaccaaaa 38935981  T
Q  127 gtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||| |||||||||||  |||||||| ||||||||||||    
T  38935980 gtgtcctatattaca--ggggtaaagacctattaaccc 38935945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 278
Target Start/End: Original strand, 37038747 - 37038861
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||| |         |||||||||||| | ||||||||| ||||||||||||||     
T  37038747 ttaaaagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtagtgtatataa 37038846  T
Q  264 tattaattgaagggt 278  Q
    |||||||||||||||    
T  37038847 tattaattgaagggt 37038861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 22292616 - 22292556
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggac 87  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22292616 agattctgctcaatcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggac 22292556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 19684363 - 19684220
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| |||| |||||||   ||||||||||| |||| |||| ||  ||||||            
T  19684363 aaagccacgtaagtgccacatcaaagattctgctgagtcaatggccttatggggcaaatctgaagaatctttatttgacaaagatcgaatctaatttttt 19684264  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
       ||||||||| |||||||||||||| | ||||||||||||||    
T  19684263 tttttacaggggacaaaaccaaaagtgtcatatattacaggggg 19684220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 18579282 - 18579221
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||||    
T  18579282 cattaaagaaaaaattatactttggaagtagtgtatatagtattaattgaagggtgcaattg 18579221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 38876935 - 38877008
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||| ||||||||||||||||||||    
T  38876935 catcatagattctgctgagtcatagggctcagggggcaatcttgaagaatctttattttacaaggacggaatct 38877008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 10195850 - 10195730
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg-annnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||||           ||||||||||| | |||| |||||||||||||||||||     
T  10195850 ttaaaagaaagagagatgttattttaccaaattatcctaatcaactattgttttgttttttattaaagaaaaaataatattttggaagtagtgtatatat 10195751  T
Q  264 tattaattgaagggtgcaatt 284  Q
     |||||||||||||| |||||    
T  10195750 cattaattgaagggtacaatt 10195730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 22468224 - 22468283
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  22468224 ttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22468283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 22474445 - 22474504
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||    
T  22474445 ttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccct 22474504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 18719421 - 18719531
Alignment:
Q  176 agagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    |||| ||||||||||||||||||||||||| ||||||||          |||||||||||| | ||||||||| || |||||||||||||||||||||||    
T  18719421 agaggtgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaaatagtgtatatagtattaattgaa 18719520  T
Q  275 gggtgcaattg 285  Q
    |||| ||||||    
T  18719521 gggtacaattg 18719531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 33056066 - 33055956
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||| |         |||||||||||| | ||||| ||| |||||||||||||||    
T  33056066 ttaaaagaaagagagatgttattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatacattgaaagtagtgtatatag 33055967  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  33055966 tattaattgaa 33055956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 22293464 - 22293582
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||| |||| |||||| |||||||||  ||||||||||| ||||||||||||| ||||||           |||||||||| ||||| ||||    
T  22293464 agattctgctgactcaaagggcttggggggcaatactgaagaatctttattttacaaggaccgaatctaaaaaaaaaatttacagggggaaaaacaaaaa 22293563  T
Q  127 gtgccctatattacagggg 145  Q
    ||||| |||||||||||||    
T  22293564 gtgccttatattacagggg 22293582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 22467039 - 22466982
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||    
T  22467039 ttacaggggacaaaaccaaaagtgacctatattacaggggggtaaagacctattaacc 22466982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 28462493 - 28462557
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||  |||||||||||||||||    
T  28462493 ttacagggtgcaaaaccaaaagtgacctatattacagggggataaaggcctattaacccttaaaa 28462557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 7028851 - 7028904
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggt 278  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  7028851 attaaagaaaaaataatactttgaaagtagtgtatatagtattaattgaagggt 7028904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 7042225 - 7042278
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggt 278  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||||||||||||    
T  7042225 attaaagaaaaaagaatactttgaaagtagtgtatatagtattaattgaagggt 7042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 36565379 - 36565306
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||||||||    ||| || ||||||||| ||||||||||| ||||||||||||||||||||    
T  36565379 catcaaagattctgctgagtcccaaggcatatggggcaatcctgaagaatctttattttacaaggacggaatct 36565306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 4658209 - 4658332
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacac--aatactttggaagtagtgtatat 261  Q
    |||||| ||| | |||||||||||||||||||| ||||||| ||||||||          |||||||||||| |   ||||||||| |||||||||||||    
T  4658209 ttaaaataaagaaagatgttattttaccaaattgtcctaatcaactattggtttgtttttcattaaagaaaaaaattaatactttgaaagtagtgtatat 4658308  T
Q  262 agtattaattgaagggtgcaattg 285  Q
    ||||||||||||||||| ||||||    
T  4658309 agtattaattgaagggtacaattg 4658332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 21 - 88
Target Start/End: Original strand, 10355234 - 10355301
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacg 88  Q
    ||||||||||| ||||||||||  |||| |||||| ||||| ||||||||||| ||||||||||||||    
T  10355234 catcaaagattatgctgagtcatagggcataggggacaatcctgaagaatctttattttacaaggacg 10355301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 39151237 - 39151304
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| |||| ||||||||| ||||||  ||||||||||| ||||||||||||| ||||||    
T  39151237 agattctgctgactcaaagggcttaggaggcaattctgaagaatctttattttacaaggacagaatct 39151304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 4288748 - 4288810
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||| ||||||||||    
T  4288748 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaatggtgcaattg 4288810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 12342249 - 12342147
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | |||| |||||||||||||| | ||||||||||||||||||| |||    
T  12342249 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaa 12342150  T
Q  283 ttg 285  Q
    |||    
T  12342149 ttg 12342147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 19686183 - 19686240
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||||||||||||||||||||||||| |||||||||   ||||||||||||||    
T  19686183 agggggcaaaaccaaaagtgccctatattaca-gggggtaaagcactattaacccttaa 19686240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 38926722 - 38926660
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  38926722 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 38926660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 8540214 - 8540093
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaag-aaaacacaatactttggaagtagtgtatata 262  Q
    |||||||||| ||||||||||||||| |||||||||||||| ||||||| |         |||||||| |||| | |||| ||| ||||||||||| |||    
T  8540214 ttaaaagaaaaagagatgttattttatcaaattatcctaatcaactattagtttgtttttcattaaagaaaaaaataatattttagaagtagtgtaaata 8540115  T
Q  263 gtattaattgaagggtgcaatt 284  Q
     ||||||||||||||| |||||    
T  8540114 atattaattgaagggtacaatt 8540093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 180 - 285
Target Start/End: Original strand, 36685734 - 36685839
Alignment:
Q  180 atgttattttaccaaattatcctaattaactattgannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtg 279  Q
    |||||||||||||||||||||||||| || |||||         ||| |||||||| | |||| |||  ||||||||| ||||||||||||||||||||     
T  36685734 atgttattttaccaaattatcctaatcaattattggtttgttttcatcaaagaaaaaataatattttcaaagtagtgtttatagtattaattgaagggta 36685833  T
Q  280 caattg 285  Q
    ||||||    
T  36685834 caattg 36685839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 11102079 - 11102204
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagg-gggcaaa 119  Q
    ||||||||||| ||||||||||  | || || ||| ||||| ||||||||||| |||||| |||||||||||||           ||||||| ||| |||    
T  11102079 catcaaagattatgctgagtcacagtgcatatgggacaatcttgaagaatctttattttaaaaggacggaatctaaaaaaaaaaattacaggaggggaaa 11102178  T
Q  120 accaaaagtgccctatattacagggg 145  Q
    ||||||||| ||||||||||||||||    
T  11102179 accaaaagtaccctatattacagggg 11102204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 19164472 - 19164420
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagg 276  Q
    |||||||||||| | ||||||||| |||||||||||||| |||||||||||||    
T  19164472 cattaaagaaaaaataatactttgaaagtagtgtatataatattaattgaagg 19164420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 27964425 - 27964469
Alignment:
Q  241 tactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||||||||||| |||||||||||||||||||| ||||||    
T  27964425 tactttggaagtagtgtgtatagtattaattgaagggtacaattg 27964469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 5969866 - 5969799
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||  ||| | ||||| ||||| | ||||||||| ||||||||||||||||||||    
T  5969866 agattctgctgagtcataggggtcaggggacaatcattaagaatctttattttacaaggacggaatct 5969799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 167 - 214
Target Start/End: Original strand, 11188229 - 11188276
Alignment:
Q  167 aaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||| ||||||||||||||||||| |||||||||| ||||||||    
T  11188229 aaaagaaagagagatgttattttaccaagttatcctaatcaactattg 11188276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 25227881 - 25227822
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||||| || || ||||||||||||| ||||||| |||||||||||||    
T  25227881 ttacaggggggaaaaccagaaatgacctatattacaggagggtaaagacctattaaccct 25227822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 45161381 - 45161420
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggg 145  Q
    ||||||| ||||||||||||||||||||||||||||||||    
T  45161381 ttacaggaggcaaaaccaaaagtgccctatattacagggg 45161420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 112 - 174
Target Start/End: Complemental strand, 85491 - 85429
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaagaaa 174  Q
    |||| |||||| ||| || ||||||||||| ||||||||| ||||||||||||||||| ||||    
T  85491 ggggaaaaaccgaaaatgacctatattacaagggggtaaagacctattaacccttaaatgaaa 85429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 441268 - 441330
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||||||||| |||| | ||||||||||||||||||| ||||||    
T  441268 cattaaagaaaaaataatactttggaagtggtgtaacatagtattaattgaagggtacaattg 441330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 34455867 - 34455821
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaacta 211  Q
    |||||||||| ||||||||| |||||||||||||||||||| |||||    
T  34455867 ttaaaagaaagagagatgttcttttaccaaattatcctaatcaacta 34455821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 11101237 - 11101165
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||||||||    ||| ||||||||||| ||||||||||| ||||| ||||||||||||||    
T  11101237 catcatagattctgctgagtcacaacgctcagggggcaatcttgaagaatctttatttt-caaggacggaatct 11101165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 31108404 - 31108359
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  31108404 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaa 31108359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 31551671 - 31551598
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||| ||||||||  |||  | |||||||||| | |||||| |||||||||| ||||||||||||    
T  31551671 catcaaagattctactgagtcacagggtatggggggcaatcctaaagaattttcattttacgaggacggaatct 31551598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 276
Target Start/End: Original strand, 7872814 - 7872866
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagg 276  Q
    |||||||||||| | ||||||||| ||||||| | ||||||||||||||||||    
T  7872814 cattaaagaaaaaataatactttgaaagtagtatttatagtattaattgaagg 7872866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 15749008 - 15749067
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||||||| | ||||||||| |||| ||||  |||||||||||||    
T  15749008 ttacagggggcaaaaccaaaagtgacatatattaca-ggggataaaagcctattaaccctt 15749067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 214
Target Start/End: Original strand, 27726410 - 27726446
Alignment:
Q  178 agatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||||||||||||||||||||| ||||||||    
T  27726410 agatgttattttaccaaattatcctaatcaactattg 27726446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 41305937 - 41305880
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||| ||||| ||||||||| |||||||||||||  |||||||| |||||||||||||    
T  41305937 ttacagagggcagaaccaaaagcgccctatattaca--ggggtaaagacctattaaccct 41305880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 209
Target Start/End: Original strand, 44712211 - 44712255
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaac 209  Q
    |||||||||| | |||||| |||||||||||||||||||||||||    
T  44712211 ttaaaagaaagaaagatgtaattttaccaaattatcctaattaac 44712255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 145
Target Start/End: Complemental strand, 5969782 - 5969743
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggg 145  Q
    ||||||| ||||||||||||||| ||||||||||||||||    
T  5969782 ttacaggaggcaaaaccaaaagtaccctatattacagggg 5969743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 274
Target Start/End: Original strand, 11188545 - 11188580
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaa 274  Q
    ||||||||||||||||||||||||| ||||||||||    
T  11188545 aatactttggaagtagtgtatataggattaattgaa 11188580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 15747808 - 15747746
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    ||||||||  |||||||||||||| |||||||||||| ||||||||   |||||||||||||||    
T  15747808 ttacagggaacaaaaccaaaagtgacctatattacag-ggggtaaaggtctattaacccttaaa 15747746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 29396717 - 29396772
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | ||||||||||||||||||| | ||| |||||||||||||||    
T  29396717 cattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggt 29396772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 30371442 - 30371384
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| |||||||||| || ||||||||||| ||| ||||| |||||||||||||    
T  30371442 ttacaggggggaaaaccaaaaatgacctatattaca-gggagtaaagacctattaaccct 30371384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 34635943 - 34636001
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| |||||||||||||    
T  34635943 ttacaggggg-aaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 34636001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 34831549 - 34831490
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||||||||| || | |||||||||||||| ||||   |||||||||||    
T  34831549 ttacagggggcaaaaccaaaaatgacatatattacagggggataaaacactattaaccct 34831490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 271
Target Start/End: Original strand, 43480907 - 43480954
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaatt 271  Q
    |||||||||||| | |||||||||||||| ||||||| ||||||||||    
T  43480907 cattaaagaaaaaataatactttggaagttgtgtataaagtattaatt 43480954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 33218643 - 33218701
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| |||||| ||| || |||||||||||||||||||||   ||||||||||    
T  33218643 ttacagggggtaaaaccgaaaatgacctatattacaggggggtaaaacactattaaccc 33218701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 44241154 - 44241093
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||||| ||||||||||| || ||||||||||| ||| |||||  |||||||||||||||    
T  44241154 ttacaggggacaaaaccaaaaatgacctatattaca-gggagtaaagtcctattaacccttaa 44241093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 44242355 - 44242412
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||||||||||||  |||||||||| || ||||||  |||||||||||    
T  44242355 ttacagggggcaaaaccaaaagtgatctatattaca-ggaggtaaaggcctattaaccc 44242412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 45081937 - 45081999
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||| ||||||||||||||| | ||| ||||||||||||||| ||||||    
T  45081937 cattaaagaaaaaataatgctttggaagtagtgtaacataatattaattgaagggtacaattg 45081999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 116 - 164
Target Start/End: Original strand, 5970764 - 5970810
Alignment:
Q  116 caaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||| ||||||||||||  |||||||| ||||||||||||    
T  5970764 caaaaccaaaagtaccctatattaca--ggggtaaagacctattaaccc 5970810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 94
Target Start/End: Complemental strand, 10355123 - 10355078
Alignment:
Q  49 ttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||| ||||| ||||||||||| |||| |||||||||||||||    
T  10355123 ttaggggacaatcctgaagaatctttatttgacaaggacggaatct 10355078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 11132666 - 11132605
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| |||| ||||| ||||||||||||||||| |||| | ||||||    
T  11132666 cattaaagaaaaaataatattttgaaagtaatgtatatagtattaattaaaggatacaattg 11132605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 12566034 - 12566079
Alignment:
Q  240 atactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| |||||||||| ||||||||||| ||| ||||||    
T  12566034 atactttggaagcagtgtatataatattaattgaatggtacaattg 12566079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 14833737 - 14833786
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||| ||||| | |||||||||||||||||||||| ||| ||||||||    
T  14833737 ttaaaataaatataaatgttattttaccaaattatcccaatcaactattg 14833786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 15481536 - 15481487
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||| |||||||| ||||||| ||||  |||||||||||||    
T  15481536 aaaaccaaaagtgacctatattgcagggggataaaggcctattaaccctt 15481487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 18555607 - 18555574
Alignment:
Q  133 tatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||| ||||||||||||||    
T  18555607 tatattacaggggggtaaagacctattaaccctt 18555574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 27964202 - 27964251
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| | ||||||||||||||||||||||  |||| ||||||||    
T  27964202 ttaaaagaaagaaagatgttattttaccaaattattttaatcaactattg 27964251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 165
Target Start/End: Complemental strand, 31551965 - 31551908
Alignment:
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||| | |||||||||||||| |||||||||| |||||||||   |||||||||||    
T  31551965 acagggaggaaaaccaaaagtgctctatattacaagggggtaaagctctattaaccct 31551908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 31552048 - 31551976
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||||||||   |||| ||||||||| | |||| ||| || ||||||||||||||||||||    
T  31552048 catcatagattctgctgagtcacaaggctcagggggcaaacatgaaaaatttt-attttacaaggacggaatct 31551976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 35799367 - 35799318
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  35799367 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 35799318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 170
Target Start/End: Original strand, 45323919 - 45323956
Alignment:
Q  133 tatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||||||||||||  |||||||||||||||||    
T  45323919 tatattacaggggggtaaaggcctattaacccttaaaa 45323956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 8238046 - 8238006
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    ||||||||||||||||||||||||  |||||||||| ||||    
T  8238046 ttacagggggcaaaaccaaaagtgttctatattacatgggg 8238006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 15808783 - 15808723
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||| |||| ||||||||||||| ||||||||  |||||| |||| ||||||||| ||||    
T  15808783 ttacatgggggaaaaccaaaagtgacctatattgtagggggataaagacctattaatcctt 15808723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 17328149 - 17328090
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||||  || || |||||||||||| |||||||| ||||||||||||||    
T  17328149 ttacaggggggaaaaccggaaatgacctatattacag-ggggtaaagacctattaaccctt 17328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 28141745 - 28141705
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||| | ||||||||||||| ||||||||||||||||    
T  28141745 ttacagggtgtaaaaccaaaagtgacctatattacaggggg 28141705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 32254681 - 32254645
Alignment:
Q  240 atactttggaagtagtgtatatagtattaattgaagg 276  Q
    |||||||| |||||||||||||| |||||||||||||    
T  32254681 atactttgtaagtagtgtatataatattaattgaagg 32254645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 165
Target Start/End: Original strand, 38877032 - 38877079
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||| ||||||||| |||||||||  ||||||||||||    
T  38877032 aaaaccaaaagtgccttatattaca-gggggtaaagccctattaaccct 38877079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 40307715 - 40307651
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||| | | |||||||| || |||||||||||||||||||||   | ||||||||||||||    
T  40307715 ttacagggaggataaccaaaaatgacctatattacaggggggtaaaacaccattaacccttaaaa 40307651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 101; Significance: 5e-50; HSPs: 100)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 23322503 - 23322668
Alignment:
Q  1 agaaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnn 99  Q
    ||||| ||||||| ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||          
T  23322503 agaaaaccatgtaggtgccacatcaaagattctgctgagtcaatgggcttagagggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaa 23322602  T
Q  100 nnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
          ||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  23322603 aaataattacagggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccct 23322668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 23321425 - 23321262
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||| ||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  23321425 aaagccatgtaggtgccacattaaagattctgcagagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttt 23321326  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||||| |||||||||||||||||||||||||||||||| || |||| | |||||||||||    
T  23321325 ttttttacatggggcaaaaccaaaagtgccctatattacaggaggataaagatctattaaccct 23321262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 9442885 - 9443048
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||| ||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  9442885 aaagccacgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaatt 9442984  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  9442985 ttttttacaaggggcaaaaccaaaagtgctctatattacaggggggtaaagacctattaaccct 9443048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 27 - 170
Target Start/End: Complemental strand, 43635970 - 43635829
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||           ||| |||||||||||||||||    
T  43635970 agattctgctgagtcaatgggcttaggggtcaatcgtgaagaatcttcattttacaaggacgaaatct-aattttttttttaaagggggcaaaaccaaaa 43635872  T
Q  127 gtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    ||||||||||||||| ||||||||| ||||||||||||| ||||    
T  43635871 gtgccctatattaca-gggggtaaagacctattaaccctaaaaa 43635829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 94
Target Start/End: Original strand, 2274562 - 2274649
Alignment:
Q  7 ccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  2274562 ccatgtaggtgcctcatcaaagattctgctgagttaatgggcttaggggacaatcgtgaagaatcttcattttacaaggacggaatct 2274649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 94
Target Start/End: Complemental strand, 6077092 - 6077010
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6077092 taagtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatct 6077010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 9441716 - 9441565
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            |||||||||    
T  9441716 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaattttttacagggg 9441617  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||| | ||||||||||||||||||| ||||||||||||||    
T  9441616 gcaaaaccaaaagtgtcttatattacaggggggtaaagacctattaaccctt 9441565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 8 - 166
Target Start/End: Original strand, 14626679 - 14626838
Alignment:
Q  8 catgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnt 106  Q
    |||||| |||||  |||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            |    
T  14626679 catgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatt 14626778  T
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14626779 tacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctt 14626838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 9 - 94
Target Start/End: Complemental strand, 2273655 - 2273570
Alignment:
Q  9 atgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  2273655 atgtaggtgccacatcaaagattctgctgagtcaatgggcttagggagcaatcgtgaagaatcttcattttacaaggacggaatct 2273570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 14625531 - 14625368
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| || |||||||| ||||||||||||||||||||||||||||||||            
T  14625531 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagagggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 14625432  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  14625431 aattttacagggggcaaaaccaaaagtgtcctatattaca-gggggtaaagacctattaaccctt 14625368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 27547489 - 27547406
Alignment:
Q  1 agaaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaag 84  Q
    |||||||||  |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27547489 agaaagccacctaagtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaag 27547406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 5561015 - 5560876
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaa 120  Q
    ||||||||||||||||||||||  | || |||||||||||| ||||||||||| ||||||||||||||||||||           |||||||||| ||||    
T  5561015 catcaaagattctgctgagtcacagagcatagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaacaaattacaggggg-aaaa 5560917  T
Q  121 ccaaaagtgccctatattacaggggggtaaatacctattaa 161  Q
    |||||||||| |||||||||||||||||||| |||||||||    
T  5560916 ccaaaagtgctctatattacaggggggtaaagacctattaa 5560876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 12 - 141
Target Start/End: Original strand, 51903383 - 51903513
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttaca 110  Q
    |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| |            |||||    
T  51903383 taagtgtcacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatattcattttacaaggacgaaatttattttattttttttaca 51903482  T
Q  111 gggggcaaaaccaaaagtgccctatattaca 141  Q
     ||||||||||||||||||||||||||||||    
T  51903483 tggggcaaaaccaaaagtgccctatattaca 51903513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 8928977 - 8928814
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnn 100  Q
    ||||||| ||||||||| | | | ||||| |||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||||            
T  8928977 aaagccacgtaagtgccaccttagagattttgctgagtcaatgggcttagggggtagttgtgaagaatcttcattttacaagaacggaatctaaaaaaaa 8928878  T
Q  101 nnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
         ||||||||||||||| |||||||||| ||||||||| ||||||||| |||||||||||||    
T  8928877 aaaaattacagggggcaaaatcaaaagtgccttatattaca-gggggtaaagacctattaaccct 8928814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 27209164 - 27209043
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||| |||||||||||||||||||||||||| |||||||||         |||||||||||| | ||||||||||||||||||||||||     
T  27209164 ttaaaagaaagagatatgttattttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttggaagtagtgtatataa 27209065  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||| ||| ||||||    
T  27209064 tattaattgaatggtacaattg 27209043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 52084734 - 52084884
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||   |||| ||||||||||| ||||||||||| ||||||||||||||||||||            |||||||||    
T  52084734 tgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaattttacagggg 52084833  T
Q  115 gcaaaaccaaaagtgccctatattaca-ggggggtaaatacctattaaccc 164  Q
     ||||||||||||||| |||||||||| |||||||||| ||||||||||||    
T  52084834 acaaaaccaaaagtgctctatattacagggggggtaaagacctattaaccc 52084884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 29568071 - 29567950
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | | |||||||||||||||||||| ||||| ||||||||          |||||||||||| | |||||||||||||||||||||||||    
T  29568071 ttaaaagaaagaaatatgttattttaccaaattattctaatcaactattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatatag 29567972  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  29567971 tattaattgaagggtacaattg 29567950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 25560848 - 25560958
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||| |         |||||||||||| | |||| ||||||||||||||||||||    
T  25560848 ttaaaagaaagagagatgttattttaccaaattatcataatcaactattagtttgtttttcattaaagaaaaaataatattttggaagtagtgtatatag 25560947  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  25560948 tattaattgaa 25560958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 31699265 - 31699386
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||| |         |||||||||||| | |||| |||||||||| ||| |||||    
T  31699265 ttaaaagaaagagagatgttattttaccaaattatcataatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtttatag 31699364  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  31699365 tattaattgaagggtacaattg 31699386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 44312046 - 44312111
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagga 86  Q
    ||||||||||| |||||||||||||||| || ||||||||||||||||||||| ||||||||||||    
T  44312046 catcaaagattatgctgagtcaatgggcatatggggcaatcgtgaagaatcttaattttacaagga 44312111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 165 - 284
Target Start/End: Original strand, 8894991 - 8895111
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga-nnnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||         ||||||| |||| | |||| |||| || |||||||||||     
T  8894991 ttaaaagaaagagagatgttattttaccaaattatcctaatcaactattgatttgtttttcattaaaaaaaaaataatattttgaaaatagtgtatataa 8895090  T
Q  264 tattaattgaagggtgcaatt 284  Q
    ||||||||||||||| |||||    
T  8895091 tattaattgaagggtacaatt 8895111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 28 - 145
Target Start/End: Original strand, 13917192 - 13917309
Alignment:
Q  28 gattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaag 127  Q
    |||||||||||||||  ||||| ||| ||||||| ||||||||||| ||||||||||||||||||||           |||||||||  |||||||||||    
T  13917192 gattctgctgagtcacagggctcaggaggcaatcttgaagaatctttattttacaaggacggaatctaaaaataaaaattacaggggagaaaaccaaaag 13917291  T
Q  128 tgccctatattacagggg 145  Q
    || |||||||||||||||    
T  13917292 tgtcctatattacagggg 13917309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 46554912 - 46554852
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  46554912 attaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattg 46554852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 146
Target Start/End: Original strand, 8930267 - 8930386
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    ||||||||||||||||  ||| | ||||||||||| ||||||||||| |||||||||||||| |||||           ||||||||| |||||||||||    
T  8930267 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaatttttttttttacaggggacaaaaccaaaa 8930366  T
Q  127 gtgccctatattacaggggg 146  Q
    || || ||||||||||||||    
T  8930367 gtaccttatattacaggggg 8930386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 282
Target Start/End: Original strand, 18794518 - 18794636
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | | |||||||||||||||||||| ||||| ||||||| |         |||||||||||| | |||| |||||||||||||||||||     
T  18794518 ttaaaagaaagaaatatgttattttaccaaattattctaatcaactattagtttgttttccattaaagaaaaaagaatattttggaagtagtgtatataa 18794617  T
Q  264 tattaattgaagggtgcaa 282  Q
    |||||||||||||||||||    
T  18794618 tattaattgaagggtgcaa 18794636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 26595045 - 26595166
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||||||||||| || |||| |         ||||||||||||   ||| |||||||| ||||||||||||    
T  26595045 ttaaaagaaagagagatgttattttaccaaattatcctaatcaattattggtttgtttttcattaaagaaaaattaattctttggaaatagtgtatatag 26595144  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||| ||| ||||||    
T  26595145 tattaattgaatggtacaattg 26595166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 1826434 - 1826493
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||| || ||||||||||    
T  1826434 ttacagggggcaaaatcaaaagtgacctatattacaggggggtaaaaacatattaaccct 1826493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 26097027 - 26097089
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    ||||||| |||||||||||||||| ||||||||||| ||||||||| |||||||||||||||||    
T  26097027 ttacaggaggcaaaaccaaaagtgacctatattaca-gggggtaaagacctattaacccttaaa 26097089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 33667632 - 33667691
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||  ||||||||||||    
T  33667632 ttacagggggcaaaaccaaaagtgacctatattacaggggtgtaaaggcctattaaccct 33667691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 52083631 - 52083580
Alignment:
Q  113 gggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  52083631 gggcaaaaccaaaaatgccctatattacaggggggtaaagacctattaaccc 52083580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 16 - 94
Target Start/End: Original strand, 37194399 - 37194476
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||| ||||| ||||||||||||||||  ||||| ||||| ||||| ||||||||||| ||||||||||||||||||||    
T  37194399 tgccacatcatagattctgctgagtcacggggctcagggg-caatcttgaagaatctttattttacaaggacggaatct 37194476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 40247381 - 40247435
Alignment:
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaa 161  Q
    ||||||||| ||||||||||||||||||||||||| ||||||||| |||||||||    
T  40247381 tacaggggggaaaaccaaaagtgccctatattacatgggggtaaagacctattaa 40247435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 168
Target Start/End: Complemental strand, 13916234 - 13916088
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaa 120  Q
    ||||| ||||| ||||||||||  | ||| || |||||||| ||||||||||| ||||||||||||||||||||           |||||| ||  ||||    
T  13916234 catcatagattgtgctgagtcacagcgctcagtgggcaatcttgaagaatctttattttacaaggacggaatct-aaaaaaaaaattacagaggagaaaa 13916136  T
Q  121 ccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||||| | ||||||||| |||||||||  |||||||||||||||    
T  13916135 ccaaaagtgtcatatattacaagggggtaaagccctattaacccttaa 13916088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 37193621 - 37193548
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||||  | || |||||||||||| ||||||||||| |||||||||||| |||||||    
T  37193621 catcaaagattctgctcagtcacagtgcatagggggcaatcttgaagaatctttattttacaaggatggaatct 37193548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 47146368 - 47146425
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||| ||||||||||||||| ||||||||||| ||||||||| |||||||||||    
T  47146368 ttacagggagcaaaaccaaaagtgacctatattacaagggggtaaagacctattaacc 47146425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 1825351 - 1825296
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaac 162  Q
    |||||||||||||||||||||||| |||||||||||| |||||||| ||||||||||    
T  1825351 ttacagggggcaaaaccaaaagtgacctatattacag-ggggtaaagacctattaac 1825296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 7191182 - 7191230
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt 213  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||    
T  7191182 ttaaaagaaagagagatgttattttaccaaattatcctaatcaactatt 7191230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 33934695 - 33934635
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||||||||  |||||||||||||| |||||  |||||||||||||    
T  33934695 ttacagggggcaaaaccaaaagtgatctatattacaggggcgtaaaaccctattaaccctt 33934635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 25600988 - 25600929
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||||||||||| |||||||| ||| |||||||| |||||||||||||    
T  25600988 ttacaggggggaaaaccaaaagtgacctatattgcagaggggtaaagacctattaaccct 25600929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 26095871 - 26095813
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||| ||||| |||||||||||| |||||||| |||||||||||||    
T  26095871 ttacagggggcaaaaccataagtgacctatattacag-ggggtaaagacctattaaccct 26095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 108 - 167
Target Start/End: Original strand, 44754604 - 44754663
Alignment:
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||  ||||||||||||||    
T  44754604 acaggggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccctta 44754663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 85
Target Start/End: Complemental strand, 52083708 - 52083630
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagg 85  Q
    ||||| || ||||| ||||| ||||||||||||||||  ||||| ||||||||||| |||| ||||||||||||||||||    
T  52083708 gccatctaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaa-aatcttcattttacaagg 52083630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 20132439 - 20132381
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||| ||| |||||||||||||| |||||||||||||||||||||  |||||||||||    
T  20132439 ttacaagggccaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccc 20132381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 49468746 - 49468808
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgta-tatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||| |||||||||||||||| |||||||||||||||||||| ||||||    
T  49468746 cattaaagaaaaaataatcctttggaagtagtgtaatatagtattaattgaagggtacaattg 49468808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 13902122 - 13902066
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    ||||||||||||||||||||| |||||||||||||| || |||||| |||||||||||    
T  13902122 ttacagggggcaaaaccaaaactgccctatattaca-ggtggtaaagacctattaacc 13902066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 24730203 - 24730248
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||    
T  24730203 ttacaggggggaaaaccaaaagtgacctatattacaggggggtaaa 24730248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 28538380 - 28538331
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| ||||||||||||||||||||||||| |||| ||||||||    
T  28538380 ttaaaagaaagagagatgttattttaccaaattatcataatcaactattg 28538331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 14978709 - 14978772
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    ||||| |||||||||||||||||| ||||||| ||| |||||||||  |||||||||||||||||    
T  14978709 ttacaaggggcaaaaccaaaagtgtcctatataaca-gggggtaaaggcctattaacccttaaaa 14978772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 285
Target Start/End: Original strand, 48025291 - 48025351
Alignment:
Q  226 ttaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  48025291 ttaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 48025351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 15961741 - 15961804
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||| |||||||||| || |||||||||||||||||||||   | |||||||||||||    
T  15961741 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaagcaccattaacccttaaa 15961804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 16785779 - 16785721
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||||  ||||||||||||    
T  16785779 ttacagggggcaaaaccaaaagtgacctacattacag-ggggtaaaggcctattaaccct 16785721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 26755335 - 26755280
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | ||||||||||||||||||| | |||||||||||||||||||    
T  26755335 cattaaagaaaaaataatactttggaagtagtgtgacatagtattaattgaagggt 26755280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 30536504 - 30536437
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||| |||||||  ||| | ||| ||||||| ||||||||||| ||||||||||||||||||||    
T  30536504 agattctgatgagtcatagggatcaggaggcaatcatgaagaatctttattttacaaggacggaatct 30536437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 32131903 - 32131961
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||| ||||||||||| |||||| ||||||||||| ||||||||| |||||||||||||    
T  32131903 ttacaaggggcaaaaccgaaagtgacctatattaca-gggggtaaagacctattaaccct 32131961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 36343212 - 36343153
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||| |||| || ||||||||||||| ||||||| |||||||||||||    
T  36343212 ttacaggggggaaaacaaaaaatgacctatattacaggagggtaaagacctattaaccct 36343153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 214
Target Start/End: Complemental strand, 5151 - 5105
Alignment:
Q  168 aaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    ||||||| | |||||||||||||||||||||||||||| ||||||||    
T  5151 aaagaaagatagatgttattttaccaaattatcctaatcaactattg 5105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 9915559 - 9915497
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  9915559 cattaaagaaaaaataatactttgcaagtagtgtaacatagtattaattgaagggtacaattg 9915497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 15823150 - 15823088
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  15823150 cattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattg 15823088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 16757245 - 16757291
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  16757245 aatactttgaaagttgtgtatatagtattaattgaagggtacaattg 16757291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 31648133 - 31648075
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||  ||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  31648133 ttacaggggataaaaccaaaagtgacctatattacatgggggtaaaggcctattaaccc 31648075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 38741612 - 38741493
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaaaccaaa 125  Q
    ||||| ||||||||||  ||| ||||||||||||  ||||||||||| |||||||||||| | |||||           || ||||||||||||||||||    
T  38741612 agattttgctgagtcataggggttagggggcaattctgaagaatctttattttacaaggatgaaatctaaaaaaaatattttacagggggcaaaaccaaa 38741513  T
Q  126 agtgccctatattacagggg 145  Q
    |||| | |||||||||||||    
T  38741512 agtgtcttatattacagggg 38741493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 39477759 - 39477805
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||| ||||||||||||||||||||||||||||| || ||||||    
T  39477759 aatacttaggaagtagtgtatatagtattaattgaagtgtacaattg 39477805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 51470186 - 51470129
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||| ||||||||||||||||| | |||||||||| |||||||| ||||||||||||    
T  51470186 ttacagagggcaaaaccaaaagtgacttatattacag-ggggtaaagacctattaaccc 51470129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 109 - 170
Target Start/End: Complemental strand, 24545511 - 24545451
Alignment:
Q  109 cagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||| |||||||||||||||| ||||||||| | |||||||||  |||||||||||||||||    
T  24545511 caggaggcaaaaccaaaagtgacctatattata-gggggtaaaagcctattaacccttaaaa 24545451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 44311342 - 44311277
Alignment:
Q  29 attctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||| |||| ||||   |||||||||| ||||||||||| |||||||| |||||||||||    
T  44311342 attctgctgattcaaagggcacggggggcaatcttgaagaatctttattttacatggacggaatct 44311277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 47145205 - 47145144
Alignment:
Q  106 ttacagggg-gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||| |||||| |||||||| |||||||||||||||||||||   ||||||||||||    
T  47145205 ttacaggggtgcaaaatcaaaagtgacctatattacaggggggtaaaggtctattaaccctt 47145144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 50105407 - 50105456
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||| |||||||| ||||||||||||| ||||||| ||||||||||||||    
T  50105407 aaaatcaaaagtgacctatattacaggagggtaaagacctattaaccctt 50105456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 50721926 - 50721987
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||| |||||||||| || |||||||||||||||||||||   | |||||||||||    
T  50721926 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaagcaccattaaccctta 50721987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 151
Target Start/End: Complemental strand, 4487595 - 4487551
Alignment:
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||    
T  4487595 tacagggggcaaaactaaaagtgctctatattacaagggggtaaa 4487551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 87
Target Start/End: Complemental strand, 4487677 - 4487617
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggac 87  Q
    ||||| ||||||||||  ||| ||| ||||||||| ||||||||||| |||||||||||||    
T  4487677 agattttgctgagtcatagggattatggggcaatcctgaagaatctttattttacaaggac 4487617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 8989615 - 8989727
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | ||||||||||||||||||||||  |||| ||||||| |         |||||||||||| | |||| |||| | |||||||||| ||    
T  8989615 ttaaaagaaagaaagatgttattttaccaaattattataatcaactattggtttgtttttcattaaagaaaaaataatattttgaatgtagtgtatagag 8989714  T
Q  264 tattaattgaagg 276  Q
    |||||||||||||    
T  8989715 tattaattgaagg 8989727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 114 - 166
Target Start/End: Original strand, 13903379 - 13903430
Alignment:
Q  114 ggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||| ||||||||||| ||||||||| | ||||||||||||    
T  13903379 ggcaaaaccaaaagtgacctatattaca-gggggtaaagatctattaaccctt 13903430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 16757174 - 16757222
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt 213  Q
    |||||||||| ||| |||||||||||||||| ||||||||| |||||||    
T  16757174 ttaaaagaaagagaaatgttattttaccaaactatcctaatcaactatt 16757222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 32130702 - 32130638
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    ||||||| || ||||||||||||| ||||||||||  |||||||||  |||||||||||| ||||    
T  32130702 ttacaggtggtaaaaccaaaagtgacctatattactagggggtaaaggcctattaaccctaaaaa 32130638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 7780221 - 7780260
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggg 145  Q
    ||||||||||||||||||||||||  ||||||||||||||    
T  7780221 ttacagggggcaaaaccaaaagtgatctatattacagggg 7780260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 8984911 - 8984852
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||| |||||||| ||||||||||| |||| ||||   |||||||||||    
T  8984911 ttacagggggcaaaatcaaaagtggcctatattacatggggctaaaactctattaaccct 8984852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 24611570 - 24611617
Alignment:
Q  239 aatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  24611570 aatactttggaagtagtgtaacatagtattaattgaagggtacaattg 24611617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 50094346 - 50094283
Alignment:
Q  224 cattaaagaaaaca-caatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  50094346 cattaaagaaaaaaacaatactttgtaagtagtgtaacatagtattaattgaagggtacaattg 50094283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 176 - 214
Target Start/End: Original strand, 5225812 - 5225850
Alignment:
Q  176 agagatgttattttaccaaattatcctaattaactattg 214  Q
    ||||| ||||||||||||||||||| |||||||||||||    
T  5225812 agagaagttattttaccaaattatcataattaactattg 5225850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 10842896 - 10842834
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||| ||| | |||||||||||||||| || ||||||    
T  10842896 cattaaagaaaaaataatactttggaagtactgtaacatagtattaattgaagagtacaattg 10842834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 12277453 - 12277515
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||  |||||||||| || |||||||||||||||||||||   | ||||||||||||    
T  12277453 ttacaggggagaaaaccaaaaatgacctatattacaggggggtaaagcaccattaacccttaa 12277515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 32806973 - 32807035
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||| ||||||||| ||||||    
T  32806973 cattaaagaaaaaataatactttgaaagtagtgtaacatagtattatttgaagggtacaattg 32807035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 38947769 - 38947719
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||| |||||| |||||||||||||||| | |||||||| |||||    
T  38947769 ttaaaagaaagagagatattattttaccaaattaccataattaaccattga 38947719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 46286853 - 46286915
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgta-tatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| |  |||||||  || ||||||| |||||||||||||||||||||||||||    
T  46286853 cattaaagaaaaaatgatactttaaaaatagtgtaatatagtattaattgaagggtgcaattg 46286915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 49201385 - 49201442
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||||||||| |||||||| || |||||||||  |||||||||||    
T  49201385 ttacaggggggaaaaccaaaagtgacctatattgca-gggggtaaaagcctattaaccc 49201442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 49900808 - 49900854
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||| |||||||||||||| ||||||||||| ||| ||||||    
T  49900808 aatactttgaaagtagtgtatatattattaattgaaaggtacaattg 49900854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 8620193 - 8620253
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| | |||||||||||||    
T  8620193 ttacaggggg-aaaaccggaaatgacctatattacaggggggtaaagatctattaaccctta 8620253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 14373399 - 14373448
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  14373399 ttaaaagaaaaagaatggttattttaccaaattatccttattaactattg 14373448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 15790483 - 15790532
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||| || || |||||||||||||||||| || ||||||||||||||    
T  15790483 aaaaccagaaatgacctatattacaggggggtcaagacctattaaccctt 15790532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 16786148 - 16786193
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||| |||||||| ||||||||||| |||||||||    
T  16786148 ttacagggggtaaaatcaaaagtgacctatattacatgggggtaaa 16786193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 24730114 - 24730069
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||| | |||||||||| || |||||||||||||||||||||    
T  24730114 ttacagggagaaaaaccaaaaatgacctatattacaggggggtaaa 24730069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 33694398 - 33694447
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||| ||| ||| |||||||||||||||||||| ||||| ||||||||    
T  33694398 ttaaaataaagagatatgttattttaccaaattattctaatcaactattg 33694447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 34032066 - 34032115
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  34032066 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 34032115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Original strand, 44557045 - 44557090
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaact 210  Q
    |||||||||| ||| ||||||||||||||||||||| |||| ||||    
T  44557045 ttaaaagaaagagaaatgttattttaccaaattatcttaataaact 44557090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 50249475 - 50249426
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  50249475 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 50249426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 4646814 - 4646751
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||| ||| |||||||||| || | ||||||| |||||| |||| ||||||||||||||||||    
T  4646814 ttacagaggggaaaaccaaaaatgacttatattagaggggg-taaagacctattaacccttaaaa 4646751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 26190788 - 26190728
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||| ||| || ||||||||||| |||||||||   ||||||||||||    
T  26190788 ttacagggggtaaaaccgaaaatgacctatattacaagggggtaaaacactattaaccctt 26190728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 27794391 - 27794355
Alignment:
Q  131 cctatattacaggggggtaaatacctattaaccctta 167  Q
    ||||||||| ||||||||||| |||||||||||||||    
T  27794391 cctatattataggggggtaaagacctattaaccctta 27794355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 33645071 - 33645031
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    ||||| ||||||||| |||||||| ||||||||||||||||    
T  33645071 ttacaaggggcaaaatcaaaagtgacctatattacaggggg 33645031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 44312130 - 44312170
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    ||||||||||||||||| || |||||||||||| |||||||    
T  44312130 ttacagggggcaaaaccgaatgtgccctatatttcaggggg 44312170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 7e-49; HSPs: 114)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 50881319 - 50881481
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||            
T  50881319 aaagccatgtaggtgccacatcaaagattctgctgagtcaatgggcttaaggggcaatcgtgaagaatcttcattttacaatgacggaatctaatttttt 50881418  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
       |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  50881419 tttttacagggggcaaaaccaaaagtggcctatattaca-gggggtaaagacctattaaccctt 50881481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 55500300 - 55500464
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnn 100  Q
    ||||||||||| ||||| |||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||| ||| |||||||            
T  55500300 aaagccatgtaggtgccacatcaaagattctgcttagtcaacgggcttagggggcaatcgtgaagaatcttcattttacagggatggaatctaaaaaaaa 55500399  T
Q  101 nnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
         ||||||||||||||||||||| || ||||||||||||||||||||| |||||||||||||    
T  55500400 taaaattacagggggcaaaaccaaaaatgtcctatattacaggggggtaaagacctattaaccct 55500464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 161
Target Start/End: Original strand, 34741292 - 34741448
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||               
T  34741292 gccatgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaat 34741391  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaa 161  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  34741392 tttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaa 34741448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 34740050 - 34739887
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  34740050 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaat 34739951  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  34739950 ttttttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 34739887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 29249605 - 29249769
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||| |||||||||||||| |||||            
T  29249605 aaagccatgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaa 29249704  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  29249705 aaatttacagggggcaaaaccaaaagttccctatattacaggggggtaaagacctattaaccctt 29249769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 55499412 - 55499321
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  55499412 aaagccatgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatct 55499321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 164
Target Start/End: Original strand, 20963598 - 20963757
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||| ||||| ||||||||||||||||||||||||||||||||               
T  20963598 gccatgtaggtgccacatcatagattctgctgagtcacagggctcaggggacaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaa 20963697  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
     |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  20963698 tttacagggggcaaagccaaaagtgccctatattacaggggggtaaagacctattaaccc 20963757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 12 - 166
Target Start/End: Complemental strand, 54554534 - 54554381
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttaca 110  Q
    |||||||| |||||||||||||||||||| |||||||||||| ||||||||||||| | |||||||||||||||||| |||||            |||||    
T  54554534 taagtgccacatcaaagattctgctgagttaatgggcttaggtggcaatcgtgaagga-cttcattttacaaggacgaaatctaaaaacaaaatattaca 54554436  T
Q  111 gggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  54554435 gggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctt 54554381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 164
Target Start/End: Original strand, 12566852 - 12566996
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaa 119  Q
    ||||| |||||| |||||||||  ||||| ||||||||||| ||||||||||||||||||||||||| ||||||           || ||||||||||||    
T  12566852 catcatagattcagctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaagaaacaaattttacagggggcaaa 12566951  T
Q  120 accaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||    
T  12566952 accaaaagtgccctatattacaagggggtaaagacctattaaccc 12566996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 20962355 - 20962192
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||| ||||||| ||||||||||||||||||||||||||||||||            
T  20962355 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcaggaggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 20962256  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        |||||||||||||||||||||||||| ||||||||| ||||||||| | ||||||||||||    
T  20962255 atttttacagggggcaaaaccaaaagtgccatatattaca-gggggtaaagatctattaaccctt 20962192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 29248390 - 29248236
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            |||||| ||    
T  29248390 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaataaatttacagcgg 29248291  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    | ||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  29248290 gtaaaaccaaaagtgtcctatattaca-gggggtaaagacctattaacccttaaaa 29248236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 161
Target Start/End: Complemental strand, 51752843 - 51752686
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||||||||| |  || ||||| | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||            
T  51752843 aaagccatgtaagtgccacc-cagagattgtactgagtcaatgggcttatggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttatt 51752745  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaa 161  Q
        ||||||||||||||| |||||||| | ||||||||| ||||||||| |||||||||    
T  51752744 ttttttacagggggcaaaatcaaaagtgtcatatattaca-gggggtaaagacctattaa 51752686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 10573136 - 10573257
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga-nnnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||||||         |||||| ||||| | ||||||||||||||| |||||||||    
T  10573136 ttaaaagaaagagagatgttattttaccaaattatcctaatcaactattgatttgattttcattaatgaaaaaataatactttggaagtattgtatatag 10573235  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  10573236 tattaattgaagggtacaattg 10573257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 17695886 - 17696031
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaa 119  Q
    ||||||| |||||||||||||||||| ||| || ||||||||||||||||||||||||||||| |||| |||||            ||||||||||||||    
T  17695886 catcaaatattctgctgagtcaatggacttcggtggcaatcgtgaagaatcttcattttacaatgacgaaatctaaaataaaaaaattacagggggcaaa 17695985  T
Q  120 accaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| | |||||||||||||||||||   |||||||||||    
T  17695986 accaaaagtgtcttatattacaggggggtaaaggactattaaccct 17696031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 40479442 - 40479501
Alignment:
Q  33 tgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  40479442 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 40479501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 12 - 163
Target Start/End: Original strand, 49630502 - 49630651
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacag 111  Q
    |||||| | ||||||| |||||||||||||||||  ||||||| ||||||||||| |||||||||||||||||||||||||||           ||||||    
T  49630502 taagtgtcacatcaaaaattctgctgagtcaatgatcttagggtgcaatcgtgaaaaatcttcattttacaaggacggaatctaaattttttttttacag 49630601  T
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
     || ||||| |||||||  | |||||||||  ||||||||||||||||||||    
T  49630602 aggacaaaatcaaaagtatcatatattaca--ggggtaaatacctattaacc 49630651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 47817914 - 47817792
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacac-aatactttggaagtagtgtatata 262  Q
    |||||||||| ||||||||||||||||||| ||||| |||| ||||||||          |||||||||||| |  ||||||||||||||||||||||||    
T  47817914 ttaaaagaaagagagatgttattttaccaatttatcataatcaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatata 47817815  T
Q  263 gtattaattgaagggtgcaattg 285  Q
    |||||||||||||||| ||||||    
T  47817814 gtattaattgaagggtacaattg 47817792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 43537594 - 43537521
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||   ||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  43537594 catcaaagattctgctgagtcacaaggcatagggggcaatcctgaagaatctttattttacaaggacggaatct 43537521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 15695096 - 15695237
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct---nnnnnnnnnnnttacagggggcaaaacca 123  Q
    |||||||||||| ||||  |||||||||| ||||| ||||||||||||||||||| |||||| |||||              ||||||||||||||||||    
T  15695096 agattctgctgactcaactggcttaggggacaatcctgaagaatcttcattttacgaggacgaaatctaaaaagaaataaaattacagggggcaaaacca 15695195  T
Q  124 aaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||   |||| |||||||||||||| |||||||||||||    
T  15695196 aaagtggtgtataatacaggggggtaaagacctattaaccct 15695237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 168 - 285
Target Start/End: Complemental strand, 30261431 - 30261313
Alignment:
Q  168 aaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatagtat 266  Q
    ||||||| ||||||||||||||||||||||||  |||| ||||||||          |||||||||||| | ||||||||| ||||| ||||||||||||    
T  30261431 aaagaaagagagatgttattttaccaaattattttaatcaactattggtttgtttttcattaaagaaaaaataatactttgaaagtaatgtatatagtat 30261332  T
Q  267 taattgaagggtgcaattg 285  Q
    |||||||||||| ||||||    
T  30261331 taattgaagggtacaattg 30261313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 52162279 - 52162165
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    ||||||||| |||||||||||||||||||||||||| |||| || |||||          |||||||||||| | |||||||||||| |||||||| |||    
T  52162279 ttaaaagaactagagatgttattttaccaaattatcttaatcaaatattggtttgtttttcattaaagaaaaaataatactttggaactagtgtatttag 52162180  T
Q  264 tattaattgaagggt 278  Q
    |||||||||||||||    
T  52162179 tattaattgaagggt 52162165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 50880051 - 50879908
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaa 120  Q
    ||||| ||||||||||||||||   |||| ||||||||||| |||| |||||| ||||||| ||||||||||||           ||| |||| ||||||    
T  50880051 catcatagattctgctgagtcacaaggctcagggggcaatcctgaaaaatctttattttaccaggacggaatctaaaaaaaaaaattagagggagcaaaa 50879952  T
Q  121 ccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||| ||||||||||| ||  ||||| |||||||||||||    
T  50879951 ccaaaagtggcctatattaca-ggaagtaaagacctattaaccct 50879908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 170
Target Start/End: Complemental strand, 21994438 - 21994321
Alignment:
Q  51 agggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaa 150  Q
    ||||||||||| | ||||||||| ||||||||||||||||||||           ||||||||| ||||| |||||||| |||||||||||| |||||||    
T  21994438 agggggcaatcctaaagaatctttattttacaaggacggaatctaaaaaaaaaa-ttacaggggacaaaatcaaaagtgtcctatattacag-ggggtaa 21994341  T
Q  151 atacctattaacccttaaaa 170  Q
    | ||||||||||| ||||||    
T  21994340 agacctattaaccgttaaaa 21994321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 40345389 - 40345450
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| ||||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  40345389 attaaagaaaatacaatactttggaagtagtgtaacatagtattaattgaagggtacaattg 40345450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 50203249 - 50203128
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | | ||||||||| ||||||||||| |||| |||||||||         |||||||||||| | |||||||| |||||| ||||||||     
T  50203249 ttaaaagaaagaaatatgttatttcaccaaattatcataatcaactattgatttgtttttcattaaagaaaaaataatacttttgaagtaatgtatataa 50203150  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  50203149 tattaattgaagggtacaattg 50203128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 1819718 - 1819616
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| |||    
T  1819718 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaa 1819619  T
Q  283 ttg 285  Q
    |||    
T  1819618 ttg 1819616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 9410282 - 9410340
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||| ||||||||||||||||||||||||||| ||||||||   ||||||||||    
T  9410282 ttacaggggacaaaaccaaaagtgccctatattacagaggggtaaaacactattaaccc 9410340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 107 - 165
Target Start/End: Complemental strand, 21798389 - 21798331
Alignment:
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||| ||||||| || || ||||||||||||||||||||| |||||||||||||    
T  21798389 tacagggggtaaaaccagaaatgacctatattacaggggggtaaagacctattaaccct 21798331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 27653830 - 27653728
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | |||| |||||||||||||| | ||||||||||||||||||| |||    
T  27653830 attttaccaaattatcctaatcaactattgagttgtttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaa 27653731  T
Q  283 ttg 285  Q
    |||    
T  27653730 ttg 27653728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 34027194 - 34027251
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||    
T  34027194 ttacagggggcaaaaccaaaagtgacctatattaca-gggggtaaaggcctattaaccc 34027251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 37654525 - 37654463
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  37654525 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 37654463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 21 - 91
Target Start/End: Original strand, 46427160 - 46427230
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaa 91  Q
    ||||| ||||||||||||||||  ||||| ||||||||||| ||| ||||||| |||||| ||||||||||    
T  46427160 catcatagattctgctgagtcacagggctcagggggcaatcttgatgaatctttattttataaggacggaa 46427230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 54354190 - 54354248
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||  |||||||||||    
T  54354190 ttacaggggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 54354248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 54555351 - 54555408
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||||| ||||||||| ||||||||| || |||||||||    
T  54555351 ttacagggggcaaaaccaaaagtgccatatattaca-gggggtaaagacttattaaccc 54555408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 11364401 - 11364280
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    ||||||||||  || ||||||||||||||||||||| ||||||| |||||          |||| |||| || | ||||||||||||||||| ||||||     
T  11364401 ttaaaagaaagggatatgttattttaccaaattatcttaattaattattggtttgtttttcattgaagagaaaataatactttggaagtagtatatataa 11364302  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  11364301 tattaattgaagggtacaattg 11364280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 13334880 - 13334823
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||| ||||||| || || ||||||||||||||||||||| |||||||||||    
T  13334880 ttacaggggggaaaaccagaaatgacctatattacaggggggtaaagacctattaacc 13334823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 93
Target Start/End: Complemental strand, 37600952 - 37600875
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatc 93  Q
    |||| ||||| ||||||||||||||||  || ||||| || ||||| | ||||||||| |||||||||||||||||||    
T  37600952 tgccacatcagagattctgctgagtcataggacttagaggccaatcctaaagaatctttattttacaaggacggaatc 37600875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 47458368 - 47458488
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactat-tgannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | |||||||||||||||||||||||||||| |||||| ||         | |||||||||| | ||||||||  ||||| |||||||||    
T  47458368 ttaaaagaaagacagatgttattttaccaaattatcctaatcaactatatgtttgtttttcgttaaagaaaa-ataatactttaaaagtaatgtatatag 47458466  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||| ||| ||||||    
T  47458467 tattaattgaatggtacaattg 47458488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 8971216 - 8971096
Alignment:
Q  167 aaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacac-aatactttggaagtagtgtatatagt 264  Q
    |||| ||| |||||| |||||||||||||||||| |||| ||||||||          |||||||||||| |  |||||||||||||||||||||||| |    
T  8971216 aaaaaaaaaagagattttattttaccaaattatcttaataaactattggtttgtttttcattaaagaaaaaaataatactttggaagtagtgtatatatt 8971117  T
Q  265 attaattgaagggtgcaattg 285  Q
    ||||||||||| || ||||||    
T  8971116 attaattgaagagtacaattg 8971096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 226 - 278
Target Start/End: Original strand, 25123770 - 25123822
Alignment:
Q  226 ttaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggt 278  Q
    |||||||||| | |||| ||||||||| |||||||||||||||||||||||||    
T  25123770 ttaaagaaaaaataatattttggaagtcgtgtatatagtattaattgaagggt 25123822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 41496380 - 41496332
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt 213  Q
    |||||||||||||| ||||||||| |||||||||||||||| |||||||    
T  41496380 ttaaaagaaatagaaatgttatttcaccaaattatcctaatcaactatt 41496332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 22 - 94
Target Start/End: Original strand, 43537752 - 43537824
Alignment:
Q  22 atcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||| ||||||||||||||||   |||| ||||||||||| |||||||| || |||||| |||||||||||||    
T  43537752 atcatagattctgctgagtcatatggctcagggggcaatcctgaagaatttttattttagaaggacggaatct 43537824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 43860913 - 43860972
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||| | |||||||||||||||||||||||||| || |||||| ||||||||||||||    
T  43860913 ttacaggagacaaaaccaaaagtgccctatattaca-ggaggtaaagacctattaaccctt 43860972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 2438389 - 2438322
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||  ||| | |||| |||||| ||||||||||| |||||||||||| |||||||    
T  2438389 agattctgctgagtcataggggtcagggagcaatcctgaagaatctttattttacaaggatggaatct 2438322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 7533727 - 7533660
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  7533727 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatct 7533660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 17289800 - 17289741
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| |||||||||| || |||||||| ||||||| |||| |||||||||||||    
T  17289800 ttacaggggggaaaaccaaaaatgacctatatttcagggggataaagacctattaaccct 17289741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 20448155 - 20448100
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | ||||||||||||||||||| | |||||||||||||||||||    
T  20448155 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggt 20448100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 11 - 94
Target Start/End: Original strand, 20985949 - 20986032
Alignment:
Q  11 gtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||| ||||||||||||||| |||| |||| | |||||||||||   |||| |||||| |||||| |||||| ||||||    
T  20985949 gtaagtgccacatcaaagattctgcggagttaatgagtttagggggcaaatttgaaaaatctttattttataaggaccgaatct 20986032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 620234 - 620280
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||||||||| |||||| ||||||||||||||||| ||||||    
T  620234 aatactttggaagtaatgtatagagtattaattgaagggtacaattg 620280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 262
Target Start/End: Original strand, 19451186 - 19451284
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatata 262  Q
    |||||||||| |||||||||||||||||||| || |||||| || |||||          |||||||||||| | ||||||||||||||||||||||||    
T  19451186 ttaaaagaaagagagatgttattttaccaaaatagcctaatcaattattggtttgtttttcattaaagaaaaaataatactttggaagtagtgtatata 19451284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 19878764 - 19878702
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||||| ||||||||||| ||||||    
T  19878764 cattaaagaaaaaataatactttggaagtagtgtaacatagtataaattgaagggtacaattg 19878702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 28734714 - 28734652
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  28734714 cattaaagaaaaaataatactttgcaagtagtgtaacatagtattaattgaagggtacaattg 28734652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 44571906 - 44571968
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  44571906 cattaaagaaaaaataatactttggaagtagtgtaacatattattaattgaagggtacaattg 44571968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 45043629 - 45043691
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| |||||||||||||| | ||||||||||||||||||| ||||||    
T  45043629 cattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaattg 45043691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 45839813 - 45839691
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacac-aatactttggaagtagtgtatata 262  Q
    |||||||||| ||| |  ||||||||||||||||||||||| ||| |||||         |||||||||||| |  ||||||||||||||| ||||||||    
T  45839813 ttaaaagaaagagaaaaattattttaccaaattatcctaatcaacaattgatttgtttttcattaaagaaaaaaataatactttggaagtaatgtatata 45839714  T
Q  263 gtattaattgaagggtgcaattg 285  Q
     ||||||||||| ||| ||||||    
T  45839713 atattaattgaatggtacaattg 45839691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 52848095 - 52848157
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  52848095 cattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggtacaattg 52848157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 52957831 - 52957893
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||| ||||||||||||||| ||||||    
T  52957831 cattaaagaaaaaataatactttggaagtagtgtaacataatattaattgaagggtacaattg 52957893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 56373616 - 56373680
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt---atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||||||||||||||   ||||| ||||||||||||||| ||||||    
T  56373616 cattaaagaaaaaataatactttggaagtagtgtaacatataatattaattgaagggtacaattg 56373680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 4432987 - 4433048
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    ||||||||||||||||||||||||  |||||||||||| |  |||||  |||||||||||||    
T  4432987 ttacagggggcaaaaccaaaagtgatctatattacaggagaataaatgtctattaaccctta 4433048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 9136404 - 9136460
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    ||||||||||||||||||||||||  |||||||||| |||| ||||| ||||||||||    
T  9136404 ttacagggggcaaaaccaaaagtgatctatattaca-ggggataaatgcctattaacc 9136460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 285
Target Start/End: Original strand, 18053034 - 18053075
Alignment:
Q  244 tttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  18053034 tttggaagtagtatatatagtattaattgaagggtacaattg 18053075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 18320696 - 18320756
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| |||||||||||||||    
T  18320696 ttacaggggg-aaaaccggaaatgacctatattacaggggggtaaagacctattaaccctta 18320756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 18454250 - 18454189
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||  ||||||  || || ||||||||||||||||||||| |||||||||||||||    
T  18454250 ttacaggggtgaaaaccggaaatgacctatattacaggggggtaaagacctattaaccctta 18454189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 165
Target Start/End: Complemental strand, 34025966 - 34025913
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||| ||||||||||| |||||||||   |||||||||||    
T  34025966 ggggcaaaaccaaaagtgacctatattacaagggggtaaaggtctattaaccct 34025913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 181 - 285
Target Start/End: Original strand, 44868249 - 44868354
Alignment:
Q  181 tgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtg 279  Q
    ||||||||||||||||| ||||||| |||||||||        | |||||||| || | |||| |||||||||| |||||||| ||||||||||| |||     
T  44868249 tgttattttaccaaattgtcctaatcaactattgatttgttttccattaaagataaaataatattttggaagtaatgtatatattattaattgaatggta 44868348  T
Q  280 caattg 285  Q
    ||||||    
T  44868349 caattg 44868354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 166 - 274
Target Start/End: Original strand, 46392045 - 46392153
Alignment:
Q  166 taaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatagt 264  Q
    ||||||||| ||| |||| ||||||||||||||||||||| ||||||||         | |||||| |||| | |||||||||||||||||||| ||| |    
T  46392045 taaaagaaaaagaaatgtaattttaccaaattatcctaatcaactattggtttgttttctattaaataaaaaataatactttggaagtagtgtaaata-t 46392143  T
Q  265 attaattgaa 274  Q
    ||||||||||    
T  46392144 attaattgaa 46392153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 53 - 94
Target Start/End: Original strand, 51754144 - 51754185
Alignment:
Q  53 ggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||| ||||||||||| ||||||||||||||||||||    
T  51754144 ggggcaatcctgaagaatctttattttacaaggacggaatct 51754185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 53814538 - 53814599
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaatt 284  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| |||||    
T  53814538 cattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaatt 53814599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 7905988 - 7906036
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt 213  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||||||    
T  7905988 ttaaaagaaagagaattgttattttaccaaattatccttattaactatt 7906036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 49166703 - 49166639
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||  || || |||||||||||||||||||||   ||||||||||||||||    
T  49166703 ttacagggggtaaaaccggaaatgacctatattacaggggggtaaaacactattaacccttaaaa 49166639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 51162131 - 51162075
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||| |||||||| ||||||||| |||||| ||||  |||||||||||||    
T  51162131 agggggcaaaatcaaaagtgacctatattatagggggataaaggcctattaaccctt 51162075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 51164020 - 51164060
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  51164020 ttacagggggcaaaaccaaaagtgacctatattataggggg 51164060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 87
Target Start/End: Original strand, 54555245 - 54555329
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggac 87  Q
    |||||||||||  |||| | ||| ||||| |||| | |||| |||||   ||||||||||||||||||||| |||||||||||||    
T  54555245 aaagccatgtagttgccacgtcagagattttgcttactcaaagggctcgaggggcaatcgtgaagaatctttattttacaaggac 54555329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 5401819 - 5401760
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||| || |||| | ||| || ||||||||||||||||||||| |||||||||||||    
T  5401819 ttacaggagggaaaatcgaaaatgacctatattacaggggggtaaagacctattaaccct 5401760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 7535347 - 7535414
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||| | |||||  |||| ||||||||||||||||| |||||  |||||||    
T  7535347 agattctgctgagtcattggggtgaggggctaatcctgaagaatcttcatttttcaagggtggaatct 7535414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 9410139 - 9410076
Alignment:
Q  25 aaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacg 88  Q
    ||||||||||||||||||  ||| | ||||||||||  |||||||| || ||||||||||||||    
T  9410139 aaagattctgctgagtcataggggtcagggggcaatactgaagaatatttattttacaaggacg 9410076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 15694597 - 15694531
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| ||||  |||||| ||| ||||| ||||||||||||||||||| ||||| ||||||    
T  15694597 agattctgctgactcaactggcttacggg-caatcctgaagaatcttcattttacgaggaccgaatct 15694531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 21246534 - 21246475
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||| |||| |||||| ||| || ||||||||||||||| ||||| |||||||||||||    
T  21246534 ttacatgggggaaaaccgaaaatgacctatattacaggggtgtaaagacctattaaccct 21246475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 169
Target Start/End: Complemental strand, 45900570 - 45900523
Alignment:
Q  122 caaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    ||||| || ||||||||||||||||||||| |||||||||||| ||||    
T  45900570 caaaaatgacctatattacaggggggtaaagacctattaacccataaa 45900523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 49089579 - 49089524
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | ||||||||||||||||||| | |||||| ||||||||||||    
T  49089579 cattaaagaaaaaataatactttggaagtagtgtaacatagtactaattgaagggt 49089524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 550730 - 550673
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||| |||||||||| |||| || |||||||||||| |||||||| ||||||||||||    
T  550730 ttacaaggggcaaaactaaaaatgacctatattacag-ggggtaaagacctattaaccc 550673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 620157 - 620207
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||  ||||||||||||||||||||||||  |||| |||||||||    
T  620157 ttaaaagaaggagagatgttattttaccaaattattttaatcaactattga 620207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 2493218 - 2493156
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||| ||||||||| ||||  ||||||||||||||||||| ||||||    
T  2493218 cattaaagaaaagataataccttggaagtaatgtaacatagtattaattgaagggtacaattg 2493156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 7272324 - 7272266
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| |||||| ||| |  ||||||||||| ||||||||| ||||||||||||    
T  7272324 ttacaggggggaaaaccgaaaataacctatattacaagggggtaaagacctattaaccc 7272266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 165
Target Start/End: Original strand, 18454454 - 18454488
Alignment:
Q  131 cctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||||||||| |||||||||||||    
T  18454454 cctatattacaggggggtaaagacctattaaccct 18454488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 19875970 - 19876028
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||| || |||||| ||| || |||||||||||||||| |||| ||||||||||||    
T  19875970 ttacaggaggaaaaaccgaaaatgacctatattacagggggttaaagacctattaaccc 19876028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 21780359 - 21780413
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||| ||||||| || || |||||||||||||| |||||| ||||||||||||    
T  21780359 agggggaaaaaccagaaatgacctatattacagggaggtaaagacctattaaccc 21780413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 24215741 - 24215802
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||  ||||||| || || |||||||||||||||| |||| ||||||||||||||||    
T  24215741 ttacaggggagaaaaccagaaatgacctatattacaggggg-taaagacctattaacccttaa 24215802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 29519566 - 29519628
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||| |||||||||| | ||||||||||||||||| | ||||||    
T  29519566 cattaaagaaaaaataatactttagaagtagtgtaacatagtattaattgaaggatacaattg 29519628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 34413528 - 34413650
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaag-aaaacacaatactttggaagtagtgtatata 262  Q
    |||||||||| ||| |||||||||||| ||||||| ||||| ||||||| |         |||||||| |||| | |||| ||| |||||||||||||||    
T  34413528 ttaaaagaaagagaaatgttattttactaaattatgctaatcaactattggttcttttttcattaaagaaaaaaataatattttagaagtagtgtatata 34413627  T
Q  263 gtattaattgaagggtgcaattg 285  Q
     ||||||||||| ||| ||||||    
T  34413628 atattaattgaatggtacaattg 34413650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 49080518 - 49080580
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||| ||||||||||| | ||| ||||||||||||||| ||||||    
T  49080518 cattaaagaaaaaataatacttcggaagtagtgtaacataatattaattgaagggtacaattg 49080580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 50138545 - 50138488
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| |||||| ||| || |||||||||||| |||||||| ||||||||||||    
T  50138545 ttacagggggaaaaaccgaaaatgacctatattacag-ggggtaaagacctattaaccc 50138488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 167
Target Start/End: Original strand, 145210 - 145255
Alignment:
Q  122 caaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||| | |||||||||||||| |||| |||||||||||||||    
T  145210 caaaagtgacttatattacagggggataaagacctattaaccctta 145255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 4505501 - 4505452
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  4505501 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 4505452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 278
Target Start/End: Original strand, 6991305 - 6991358
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggt 278  Q
    ||||||||||| | ||||||||| || ||||||||||| |||||| ||||||||    
T  6991305 attaaagaaaaaataatactttgaaaatagtgtatataatattaactgaagggt 6991358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 13910851 - 13910896
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||  |||||||||| || |||||||||||||||||||||    
T  13910851 ttacaggggagaaaaccaaaaatgacctatattacaggggggtaaa 13910896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 15522756 - 15522715
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggggg 147  Q
    |||||||||| |||||||||| || |||||||||||||||||    
T  15522756 ttacaggggggaaaaccaaaaatgacctatattacagggggg 15522715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Original strand, 35539805 - 35539849
Alignment:
Q  131 cctatattacaggggggtaaatacctattaacccttaaaagaaata 176  Q
    ||||||||||||||| ||||||||||||||||||| |||| |||||    
T  35539805 cctatattacagggg-gtaaatacctattaaccctaaaaacaaata 35539849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 468248 - 468216
Alignment:
Q  131 cctatattacaggggggtaaatacctattaacc 163  Q
    |||| ||||||||||||||||||||||||||||    
T  468248 cctaaattacaggggggtaaatacctattaacc 468216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 107 - 151
Target Start/End: Original strand, 4812577 - 4812621
Alignment:
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    ||||||||| |||||| ||| || |||||||||||||||||||||    
T  4812577 tacaggggggaaaaccgaaaatgacctatattacaggggggtaaa 4812621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 14183668 - 14183628
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||| | ||||||||||||||||||||||||| ||||||    
T  14183668 ttacagagagcaaaaccaaaagtgccctatattagaggggg 14183628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 285
Target Start/End: Complemental strand, 18430103 - 18430043
Alignment:
Q  226 ttaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||| | ||||||| | ||||||||||  ||||||||||||||||||| ||||||    
T  18430103 ttaaagaaaaaataatacttagaaagtagtgtaacatagtattaattgaagggtacaattg 18430043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 20613023 - 20612983
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| ||||||||||||| |||||||| |||||||    
T  20613023 ttacaggggggaaaaccaaaagtgacctatattgcaggggg 20612983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 21780178 - 21780120
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||| ||| || |||||||||||||||| |||| ||||||||||||||    
T  21780178 ttacaggggg-aaaaccgaaaatgacctatattacaggggg-taaagacctattaaccctt 21780120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 22272987 - 22272928
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||| || |||||| ||| || |||||||||||| |||||||| ||||||||||||||    
T  22272987 ttacaggagggaaaaccgaaaatgacctatattacag-ggggtaaaaacctattaaccctt 22272928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 22854020 - 22853960
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||| ||| || ||||||||||| |||||||||   ||||||||||||    
T  22854020 ttacagggggtaaaaccgaaaatgacctatattacaagggggtaaaacactattaaccctt 22853960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 31110483 - 31110523
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  31110483 ttacagggggaaaaaccaaaaatgacctatattacaggggg 31110523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 272
Target Start/End: Complemental strand, 44651003 - 44650955
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattg 272  Q
    ||||||||| || | |||| |||| ||||||||||||||||||||||||    
T  44651003 cattaaagacaatataatattttgaaagtagtgtatatagtattaattg 44650955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 94
Target Start/End: Complemental strand, 46426211 - 46426171
Alignment:
Q  54 gggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||  ||||||||||| ||||||||||||||||||||    
T  46426211 gggcaattttgaagaatctttattttacaaggacggaatct 46426171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #110
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 48029471 - 48029413
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||||| || |||| |||||| |||||||||  |||||||||||||    
T  48029471 ttacagggggcaaaaccaaaa-tgacctaaattaca-gggggtaaaggcctattaaccctt 48029413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #111
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 49166962 - 49167022
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||||  || || |||||||||||||||||||||   ||||||||||||    
T  49166962 ttacaggggggaaaaccggaaatgacctatattacaggggggtaaaacactattaaccctt 49167022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #112
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 54053627 - 54053567
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||| |||||||  |||||||||||| ||| ||||  | |||||||||||    
T  54053627 ttacagggggcaaaatcaaaagtaacctatattacagagggttaaaggcttattaaccctt 54053567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #113
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 55499308 - 55499248
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||| |||||||| | | |||||| || ||||||| ||| ||||||||||    
T  55499308 ttacagggggcaaaatcaaaagtgtcatgtattaccggagggtaaagaccgattaaccctt 55499248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #114
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Original strand, 56555731 - 56555763
Alignment:
Q  182 gttattttaccaaattatcctaattaactattg 214  Q
    ||||||||||||||||||||| |||||||||||    
T  56555731 gttattttaccaaattatccttattaactattg 56555763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 4869 - 4701
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| |||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||            
T  4869 aaagccatgtaggtgccacatcaaagattctgctgagtcaattgacttacggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttt 4770  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
        ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||    
T  4769 ttttttacaggaggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctaaaaa 4701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 5788 - 5953
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct----nnnn 98  Q
    ||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||            
T  5788 aaagccatgtaggtgccacatcaaatattctgctgagtcaatgggcttagggggcaatcgtgaagtatcttcattttacaaggacggaatctataaaaaa 5887  T
Q  99 nnnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
           ||||| |||||||||||||||||||||||||||||||| | ||||| ||||||||||||    
T  5888 aaaaaaattacaaggggcaaaaccaaaagtgccctatattacaggagtgtaaagacctattaaccc 5953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 96; Significance: 5e-47; HSPs: 109)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 15086384 - 15086220
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||| ||||||||| | ||| |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||            
T  15086384 aaagccacgtaagtgccacctcagagattctgctaagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaatattt 15086285  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  15086284 ttttttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 15086220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 167
Target Start/End: Original strand, 10616667 - 10616834
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct---nnnnn 99  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  10616667 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaatttt 10616766  T
Q  100 nnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
          |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  10616767 ttttttttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctta 10616834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 22256364 - 22256200
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    |||||||  |||||||| |||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||            
T  22256364 aaagccacctaagtgccacatcaaagattctgctaagtcaatggacttagggggtaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaat 22256265  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        |||||||||||||||||||||||| | ||||||||||||||||||| || |||||||||||    
T  22256264 agttttacagggggcaaaaccaaaagtgtcatatattacaggggggtaaagacttattaaccctt 22256200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 46597404 - 46597566
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||| |||| |||| | ||| ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||            
T  46597404 aaagccacgtaactgccacctcagagattatgctgagtcaatgggcttagggggcaattgtgaagaatcttcattttacaaggacggaatctaaattgat 46597503  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||||||| |||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  46597504 ttttttacaggaggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 46597566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 37977405 - 37977565
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||| |||||||||   ||| |||||||||||||||| |||||||||||||||||| |||||| |||||||||||||||||||||||||            
T  37977405 aaagccacgtaagtgccatctcagagattctgctgagtcattgggcttagggggcaatcatgaagattcttcattttacaaggacggaatct--aatttt 37977502  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
       |||||||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  37977503 tttttacagggggcaaaaccaaaagtgtcctatattaca-gggggtaaagacctattaaccctt 37977565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 6 - 163
Target Start/End: Complemental strand, 10615433 - 10615276
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||               
T  10615433 gccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaa 10615334  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
     |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||    
T  10615333 tttacagggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacc 10615276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 23 - 165
Target Start/End: Original strand, 38843466 - 38843608
Alignment:
Q  23 tcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaacc 122  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||||||| ||||           |||||||||||||||||    
T  38843466 tcaaagattctgctgagtcaatggacttagggggcaatcgtgacgaatcttcattttataaggacgggatctaaaatttttttttacagggggcaaaacc 38843565  T
Q  123 aaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||| |||||||||||  |||||||| |||||| ||||||    
T  38843566 aaaagtgtcctatattacaaaggggtaaagacctatcaaccct 38843608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 28 - 164
Target Start/End: Complemental strand, 46610145 - 46610009
Alignment:
Q  28 gattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnn-ttacagggggcaaaaccaaaa 126  Q
    |||||||||||||||  ||||| |||| |||||| ||||||||||||||||||||||||||||||||            |||||||||||||||||||||    
T  46610145 gattctgctgagtcacagggctcagggagcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaaattacagggggcaaaaccaaaa 46610046  T
Q  127 gtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  46610045 gtgccctatattacag-ggggtaaagacctattaaccc 46610009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 28208059 - 28208208
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaa 119  Q
    ||||| ||||||||||||||||  || || ||||||||||| ||||||||||| ||||||||||||||||||||            |||||||||| |||    
T  28208059 catcatagattctgctgagtcacaggactcagggggcaatcttgaagaatctttattttacaaggacggaatctaaaaaaaaaaaattacaggggg-aaa 28208157  T
Q  120 accaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    ||||||||||||||||||||||||||||||||   ||||||||||| ||||    
T  28208158 accaaaagtgccctatattacaggggggtaaagctctattaaccctaaaaa 28208208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 36844717 - 36844827
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||| ||||| |||||| ||||||||||||||||||||||| |||||||||         |||||||||||||| ||||||||||||||||||||||||     
T  36844717 ttaacagaaagagagatattattttaccaaattatcctaatcaactattgattagtttttcattaaagaaaacataatactttggaagtagtgtatataa 36844816  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  36844817 tattaattgaa 36844827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 51116372 - 51116229
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||| ||||||||| | |||||||||||||||||| |||||| |||||||| ||   ||||||||||| ||||||||||||| ||||||            
T  51116372 aaagccacgtaagtgccacgtcaaagattctgctgagttaatgggtttagggggaaaatctgaagaatctttattttacaaggactgaatctaaaaaaaa 51116273  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
       ||||||| |||||||| |||| |||| ||||||||||||||    
T  51116272 tatttacaggaggcaaaactaaaattgccatatattacaggggg 51116229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 19373761 - 19373640
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||| ||||||| ||||||||          |||||||||||| | || ||||||||||||||||||||      
T  19373761 ttaaaagaaagagagatgttattttaccaaattctcctaatcaactattggtttgtttttcattaaagaaaaaataaaactttggaagtagtgtatatga 19373662  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  19373661 tattaattgaagggtacaattg 19373640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 277
Target Start/End: Complemental strand, 38141125 - 38141012
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    ||||||||||||||||||||||||||||||||||| ||||| || |||||          |||||||||||| |  ||| ||||||||||||||||||||    
T  38141125 ttaaaagaaatagagatgttattttaccaaattattctaatcaattattggtttgtttttcattaaagaaaaaattatattttggaagtagtgtatatag 38141026  T
Q  264 tattaattgaaggg 277  Q
    ||||||||||||||    
T  38141025 tattaattgaaggg 38141012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 133 - 214
Target Start/End: Original strand, 40717613 - 40717694
Alignment:
Q  133 tatattacaggggggtaaatacctattaacccttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    ||||||||||||| | |||   |||||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  40717613 tatattacaggggtgaaaaacactattaaccctttaaagaaatagagatgttattttaccaaattatcttaatcaactattg 40717694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 29 - 165
Target Start/End: Complemental strand, 28207113 - 28206981
Alignment:
Q  29 attctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaagt 128  Q
    ||||||||||||||  ||||| ||||||||||| ||||||||||| |||||||||   ||||||||           |||||||||| ||||||||||||    
T  28207113 attctgctgagtcacagggctcagggggcaatcttgaagaatctttattttacaa---cggaatctaaaaaaaaat-ttacaggggggaaaaccaaaagt 28207018  T
Q  129 gccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||| |||||||  ||||||||||||    
T  28207017 gccctatattacaggagggtaaagccctattaaccct 28206981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 30315485 - 30315370
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatac-tttggaagtagtgtatata 262  Q
    |||| ||||| |||||||||||||||||||||||||||||| ||||||| |         |||||||||||| | ||||| |||| ||||||||||||||    
T  30315485 ttaagagaaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatacttttgaaagtagtgtatata 30315386  T
Q  263 gtattaattgaagggt 278  Q
    ||||||||||||||||    
T  30315385 gtattaattgaagggt 30315370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 55 - 167
Target Start/End: Complemental strand, 37976078 - 37975966
Alignment:
Q  55 ggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatac 154  Q
    ||||||| || |||||||| ||||||||||||||||||||           ||| ||||||||||||||||||| ||||||||||||||||||||||       
T  37976078 ggcaatcctggagaatctttattttacaaggacggaatctaaaaaaaaaatttatagggggcaaaaccaaaagtaccctatattacaggggggtaaaact 37975979  T
Q  155 ctattaaccctta 167  Q
    |||||||||||||    
T  37975978 ctattaaccctta 37975966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 42072160 - 42072046
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||| |||||||||||| |||||||| |||| |||||||||        | ||||||||||||| |||||||| |||||| ||||||||     
T  42072160 ttaaaagaaagagatatgttattttactaaattatcataatcaactattgatttgttttccattaaagaaaacataatactttagaagtaatgtatataa 42072061  T
Q  264 tattaattgaagggt 278  Q
    |||||||||||||||    
T  42072060 tattaattgaagggt 42072046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 18142197 - 18142259
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||    
T  18142197 ttacagggggcaaaaccaaaagtgacctatattaca-gggggtaaaggcctattaacccttaaa 18142259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 22257254 - 22257390
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    ||||| || ||| |||| |||||  ||||| |||| ||||||||||| ||||||||||||| ||||||           ||||| |||||||||| ||||    
T  22257254 agattatgttgactcaaagggctcggggggaaatcctgaagaatctttattttacaaggacagaatctaaaaaaaaaa-ttacaaggggcaaaacaaaaa 22257352  T
Q  127 gtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| |||||||||||||| ||||||||||||    
T  22257353 gtgccctataatacaggggggtaaagacctattaaccc 22257390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 18705011 - 18704949
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||| |||||||||||||||||||||||| ||||||||||   ||||||||||||||    
T  18705011 ttacaggggggaaaaccaaaagtgccctatattactggggggtaaagctctattaacccttaa 18704949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 16386511 - 16386629
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||           |||||||||  ||||||||||    
T  16386511 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaatttttttttttacaggggctaaaaccaaaa 16386610  T
Q  127 gtgccctatattacagggg 145  Q
    |||| ||||||||||||||    
T  16386611 gtgcactatattacagggg 16386629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 24842958 - 24842840
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||           |||||||||  ||||||||||    
T  24842958 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaaaaaaaaaaattacaggggctaaaaccaaaa 24842859  T
Q  127 gtgccctatattacagggg 145  Q
    |||| ||||||||||||||    
T  24842858 gtgcactatattacagggg 24842840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 30934784 - 30934905
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||||||||| ||||||||| |||| || |||||          ||||||||| || | |||||||| ||||||||||||||||    
T  30934784 ttaaaagaaagagagatgttattttatcaaattatcataatcaaatattggtttgtttttcattaaagataaaataatactttagaagtagtgtatatag 30934883  T
Q  264 tattaattgaagggtgcaattg 285  Q
    |||||||||| |||| ||||||    
T  30934884 tattaattgaggggtacaattg 30934905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 48044331 - 48044276
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaac 162  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||||    
T  48044331 ttacagggggcaaaaccaaaagtgccctatatcaca-gggggtaaagacctattaac 48044276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 14 - 94
Target Start/End: Original strand, 48288268 - 48288348
Alignment:
Q  14 agtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||| ||||| |||||||| |||||||  ||||| ||| ||| ||| ||||||||||| ||||||||||||||||||||    
T  48288268 agtgccacatcatagattctgttgagtcacagggctcaggaggcgatcctgaagaatctttattttacaaggacggaatct 48288348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 27315331 - 27315264
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||| | ||||||||||| |||| |||||| ||||||||||||||| ||||    
T  27315331 agattctgctgagtcattgggatcagggggcaatcctgaaaaatctttattttacaaggacgggatct 27315264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 11360347 - 11360405
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||  |||||||||||    
T  11360347 ttacaggggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 11360405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 18140997 - 18140936
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||| ||||||||||||||| |||||||||||| ||||||||  |||||||||||||||    
T  18140997 ttacagggagcaaaaccaaaagtgacctatattacag-ggggtaaaggcctattaacccttaa 18140936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 40487940 - 40487882
Alignment:
Q  227 taaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||| | |||||||| ||||||||||||||||||||||||||| ||| ||||||    
T  40487940 taaagaaaaaataatactttagaagtagtgtatatagtattaattgaaaggtacaattg 40487882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 45213756 - 45213818
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgta-tatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| |||||||||| |||||||||||||||||||| ||||||    
T  45213756 cattaaagaaaaaataatactttgaaagtagtgtaatatagtattaattgaagggtacaattg 45213818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 51398166 - 51398064
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | |||| |||||||||||||| | ||||||||||||||||||| |||    
T  51398166 attttaccaaattatcctaatcaactattgatttatttttcattaaagaaaaaataatattttggaagtagtgtaacatagtattaattgaagggtacaa 51398067  T
Q  283 ttg 285  Q
    |||    
T  51398066 ttg 51398064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 54567747 - 54567800
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  54567747 agggggcaaaaccaaaagtgacctatattaca-gggggtaaagacctattaaccc 54567800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 2011199 - 2011126
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||| ||||||||||||||   ||| ||| |||||||| ||||||||||| ||||||||||||| ||||||    
T  2011199 catcaaatattctgctgagtcacaaggcatagagggcaatcctgaagaatctttattttacaaggacagaatct 2011126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 4218866 - 4218923
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||||||||||||||||| ||||||||||  |||||||||  ||||||||||    
T  4218866 ttacagggggcaaaaccaaaagtgacctatattaccagggggtaaaggcctattaacc 4218923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 5205174 - 5205113
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| |||||||||||||||    
T  5205174 ttacaggggggaaaaccggaaatgacctatattacaggggggtaaaaacctattaaccctta 5205113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 43930714 - 43930787
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||||||||  |  || ||||||||||| ||||||||||| |||||||||||| |||||||    
T  43930714 catcatagattctgctgagtcacagaactgagggggcaatcttgaagaatctttattttacaaggatggaatct 43930787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 2458124 - 2458068
Alignment:
Q  224 cattaaagaaaaca-caatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | |||||||||||||||||||| |||||||||||||||||||||    
T  2458124 cattaaagaaaaaaacaatactttggaagtagtgtaatatagtattaattgaagggt 2458068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 5205354 - 5205418
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| ||||||||||||| ||||    
T  5205354 ttacaggggggaaaaccggaaatgacctatattacaggggggtaaaaacctattaaccctaaaaa 5205418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 166
Target Start/End: Complemental strand, 23539401 - 23539260
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaaaccaaa 125  Q
    |||||||||||| ||||   | ||||||||||||| | ||||||||||||||||| |||| |||||||           || ||||||||||||||||||    
T  23539401 agattctgctgactcaactaggttagggggcaatcctaaagaatcttcattttacgaggatggaatctaaatttttttttttacagggggcaaaaccaaa 23539302  T
Q  126 agtgccctatattacagg-ggggtaaatacctattaaccctt 166  Q
    ||||   ||||||||||| ||||||||  |||||||||||||    
T  23539301 agtggtgtatattacagggggggtaaaggcctattaaccctt 23539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 24729630 - 24729694
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    ||||||| |||||||||||||||  ||||||||||||||| |||||  |||||||||||| ||||    
T  24729630 ttacaggaggcaaaaccaaaagtaacctatattacaggggagtaaaggcctattaaccctaaaaa 24729694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 51252284 - 51252344
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||||| || || |||||||||||||||| |||| ||||||||||||||    
T  51252284 ttacaggggggaaaaccagaaatgacctatattacagggggataaagacctattaaccctt 51252344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 15093633 - 15093700
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||| |||||||  ||| | ||||||||||| ||||||||||| |||||||||||| |||||||    
T  15093633 agattctgttgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggatggaatct 15093700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 7248922 - 7248861
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||||||||||||||||| ||  ||||||||||| ||||||||  |||||||||||||||    
T  7248922 ttacagggggcaaaaccaaaaatgatctatattacag-ggggtaaaggcctattaacccttaa 7248861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 8355567 - 8355624
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||| || || ||||||||||||||||||||| ||||||||||||    
T  8355567 ttacaggggg-aaaaccagaaatgacctatattacaggggggtaaagacctattaaccc 8355624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 9189410 - 9189520
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||| ||| ||||||||||||||||||||| ||| |||| ||||||||           ||||||||||| | |||| |||||||||| |||||||||    
T  9189410 ttaaaataaaaagagatgttattttaccaaatcatcgtaatcaactattggtttgttttttattaaagaaaaaataatattttggaagtaatgtatatag 9189509  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  9189510 tattaattgaa 9189520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 14824808 - 14824750
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||| |||||||| ||||||||||||||| |||||   ||||||||||    
T  14824808 ttacagggggcaaaatcaaaagtgacctatattacaggggcgtaaagcactattaaccc 14824750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 24909437 - 24909376
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||| ||||||||||||| |  |||||||||||| ||||||||| |||||||||||||||    
T  24909437 ttacaggaggcaaaaccaaaatttacctatattacag-ggggtaaatgcctattaacccttaa 24909376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 30431276 - 30431174
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         ||||| |||||| | ||||||||||||||||||| ||||| ||||||||||||| | |||    
T  30431276 attttaccaaattatcctaatcaactattgacttgtttttcattagagaaaaaataatactttggaagtagtgtaatataatattaattgaaggttacaa 30431177  T
Q  283 ttg 285  Q
    |||    
T  30431176 ttg 30431174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 38363907 - 38363845
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| |  |||||||||||||||||| ||||||    
T  38363907 cattaaagaaaaaataatactttggaagtagtgtaacgtagtattaattgaagggtacaattg 38363845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 42886914 - 42886864
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||| |||  |||||||||||||||||||||| ||||||||||||    
T  42886914 ttaaaagaaagagaattgttattttaccaaattatccttattaactattga 42886864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 2011874 - 2011939
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagga 86  Q
    ||||| ||||||||||||||||  ||| | ||||| ||||| ||||||||||| ||||||||||||    
T  2011874 catcatagattctgctgagtcatagggttcaggggacaatcctgaagaatctttattttacaagga 2011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 3152841 - 3152902
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | |||| |||||||||||||| | ||||||||||||||||||| ||||||    
T  3152841 attaaagaaaataaaatattttggaagtagtgtaacatagtattaattgaagggtacaattg 3152902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 4392291 - 4392250
Alignment:
Q  244 tttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  4392291 tttggaagtagtatatatagtattaattgaagggtacaattg 4392250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 11393660 - 11393599
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | ||||||||||||||||||| | || |||||||||||||||| ||||||    
T  11393660 attaaagaaaaaataatactttggaagtagtgtaacattgtattaattgaagggtacaattg 11393599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 112 - 165
Target Start/End: Original strand, 19111263 - 19111316
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||| ||||||||||||| |||||||||||||||||||||   |||||||||||    
T  19111263 ggggtaaaaccaaaagtgacctatattacaggggggtaaaacactattaaccct 19111316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 24528471 - 24528548
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatc 93  Q
    |||| ||||| ||||||||||||||||  ||||| ||||| ||||| | |||||| || ||||||| |||||||||||    
T  24528471 tgccacatcagagattctgctgagtcatagggctcaggggacaatcttaaagaatatttattttacgaggacggaatc 24528548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 27521578 - 27521521
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||| |||||||||| |  ||||||||||| ||||||||| |||||||||||    
T  27521578 ttacaggggggaaaaccaaaaataacctatattacacgggggtaaagacctattaacc 27521521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 38016490 - 38016437
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagg 276  Q
    |||||||||||| | ||||||||||||||||||| | |||||||||||||||||    
T  38016490 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagg 38016437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 43930050 - 43929977
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||    || ||||||||| || |||| |||||| |||||||||||||| |||||    
T  43930050 catcaaagattctgctgagtcacaatgcatagggggcattcttgaataatctttattttacaaggacgaaatct 43929977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 45460831 - 45460782
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||||| |  |||||||||||||||||||||| |||||||||||    
T  45460831 ttaaaagaaataaaattgttattttaccaaattatccttattaactattg 45460782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 151
Target Start/End: Original strand, 51386331 - 51386461
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaa 120  Q
    ||||| |||||||||||| ||||  |||| ||| ||||||  |||||||| || ||||||| ||||||||||||           |||||| || |||||    
T  51386331 catcagagattctgctgactcaaatggctcaggaggcaattctgaagaattttaattttacgaggacggaatctaaaaaaaaatattacagaggacaaaa 51386430  T
Q  121 ccaaaagtgccctatattacaggggggtaaa 151  Q
    ||||||||| | |||||||||||||| ||||    
T  51386431 ccaaaagtgtcttatattacagggggctaaa 51386461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 86
Target Start/End: Original strand, 52396361 - 52396426
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagga 86  Q
    ||||||||||| ||||||||||  |||| || ||||||||| ||||||||||| |||||| |||||    
T  52396361 catcaaagattttgctgagtcacagggcataaggggcaatcttgaagaatctttattttataagga 52396426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 31835841 - 31835900
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||| |||||||| | ||||||||| ||||||||| || |||||||||||    
T  31835841 ttacagggggcaaaatcaaaagtgtcatatattaca-gggggtaaagacatattaaccctt 31835900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 283
Target Start/End: Original strand, 31853596 - 31853656
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaat 283  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||    
T  31853596 cattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaat 31853656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 45291477 - 45291437
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    ||||| |||||||||||||||||| ||||||||||||||||    
T  45291477 ttacaaggggcaaaaccaaaagtgacctatattacaggggg 45291437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 48901834 - 48901774
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | |||||| || || ||||||||||||||||||||| ||||| ||||||    
T  48901834 attaaagaaaaaataatactatgaaattagtgtatatagtattaattggagggtacaattg 48901774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Complemental strand, 48903400 - 48903340
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | |||||| || || ||||||||||||||||||||| ||||| ||||||    
T  48903400 attaaagaaaaaataatactatgaaattagtgtatatagtattaattggagggtacaattg 48903340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 83
Target Start/End: Original strand, 54439218 - 54439298
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaa 83  Q
    ||||||| ||||| ||  ||||| ||||| |||||||||||||  ||| ||||| ||||||||||||| || |||||||||    
T  54439218 aaagccaagtaagggcaacatcagagattatgctgagtcaatgtccttggggggtaatcgtgaagaatatttattttacaa 54439298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 54566568 - 54566507
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    ||||||||| |||||||||||||| |||||||||||  ||||||||   |||||||||||||||    
T  54566568 ttacaggggacaaaaccaaaagtgacctatattaca--ggggtaaaggtctattaacccttaaa 54566507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 23525350 - 23525405
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | ||||||||||||||| ||| | |||||||||||||||||||    
T  23525350 cattaaagaaaaaataatactttggaagtaatgtaacatagtattaattgaagggt 23525405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 27067768 - 27067662
Alignment:
Q  178 agatgttattttaccaaattatcctaattaactattgannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaaggg 277  Q
    |||||||| ||||||||||||||||||| ||||||||         |||||||||||| | ||   |||| |||| |||||| |||||||||||||||||    
T  27067768 agatgttaatttaccaaattatcctaatcaactattggtttgttttcattaaagaaaa-ataaagttttgaaagttgtgtatgtagtattaattgaaggg 27067670  T
Q  278 tgcaattg 285  Q
    | ||||||    
T  27067669 tacaattg 27067662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 30586220 - 30586161
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||  ||||||  || || ||||||||||||||||||||| |||||||||||||    
T  30586220 ttacaggggtgaaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 30586161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 34062338 - 34062377
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggg 145  Q
    |||||||||| ||||||||||||| |||||||||||||||    
T  34062338 ttacagggggaaaaaccaaaagtgacctatattacagggg 34062377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 46596232 - 46596165
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||  ||| | | ||||||||| ||||||||||| ||||||||| || |||||||    
T  46596232 agattctgctgagtcataggggtcatggggcaatcctgaagaatctttattttacaatgatggaatct 46596165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 278
Target Start/End: Original strand, 47895378 - 47895433
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | |||||||||||| |||||| | |||||||||||||||||||    
T  47895378 cattaaagaaaaaataatactttggaaatagtgtaacatagtattaattgaagggt 47895433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 7118145 - 7118087
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||  || || ||||||||||||||| ||||| ||||||||||||    
T  7118145 ttacaggggggaaaaccggaaatgacctatattacaggggtgtaaagacctattaaccc 7118087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 146
Target Start/End: Complemental strand, 12210079 - 12210045
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||||||||||| ||||||||||||||||    
T  12210079 ggggcaaaaccaaaagtgacctatattacaggggg 12210045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 144
Target Start/End: Original strand, 29184981 - 29185019
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggg 144  Q
    ||||||| |||||||||||||||| ||||||||||||||    
T  29184981 ttacaggaggcaaaaccaaaagtgacctatattacaggg 29185019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 30586398 - 30586456
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||  ||||||| || || |||||||||| |||||||||| ||||||||||||    
T  30586398 ttacaggggtgaaaaccagaaatgacctatattactggggggtaaagacctattaaccc 30586456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 199
Target Start/End: Original strand, 30680798 - 30680832
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattat 199  Q
    |||||||||| ||||||||||||||||||||||||    
T  30680798 ttaaaagaaaaagagatgttattttaccaaattat 30680832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 35557792 - 35557854
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | |||||| |||||||| ||| ||||||    
T  35557792 cattaaagaaaaaataatactttggaagtagtgtaacatagtaataattgaaaggtacaattg 35557854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 50088350 - 50088412
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    ||||||||||||   ||||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  50088350 cattaaagaaaaattaatactttgaaagtagtgtaacatagtattaattgaagggtacaattg 50088412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 3986026 - 3985977
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||  | |||||||||||||||||||| |||||||||||    
T  3986026 ttaaaagaaagagaatttttattttaccaaattatccttattaactattg 3985977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 12072864 - 12072908
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||||    
T  12072864 ttacagcgggcaaaaccaaaagtgacctatattac-ggggggtaaa 12072908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 15096582 - 15096537
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  15096582 ttacagggggaaaaacaaaaaatgacctatattacaggggggtaaa 15096537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 16308163 - 16308118
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||| | |||||||||| || |||||||||||||||||||||    
T  16308163 ttacagggaggaaaaccaaaaatgacctatattacaggggggtaaa 16308118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 18945857 - 18945812
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || ||||||||||||| |||||||    
T  18945857 ttacagggggtaaaaccaaaaatgacctatattacaggtgggtaaa 18945812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 19115551 - 19115502
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  19115551 ttaaaagaaaaagaatggttattttaccaaattatccttattaactattg 19115502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 21655136 - 21655091
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||| | |||||||||| || |||||||||||||||||||||    
T  21655136 ttacagggaggaaaaccaaaaatgacctatattacaggggggtaaa 21655091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 225 - 274
Target Start/End: Complemental strand, 22857204 - 22857155
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    ||||||||||| | |||| ||| ||||||||||||||| |||||||||||    
T  22857204 attaaagaaaaaataatattttagaagtagtgtatataatattaattgaa 22857155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 25924099 - 25924054
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  25924099 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 25924054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Complemental strand, 27432715 - 27432682
Alignment:
Q  131 cctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||||||||| ||||||||||||    
T  27432715 cctatattacaggggggtaaagacctattaaccc 27432682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 284
Target Start/End: Original strand, 33194065 - 33194126
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaatt 284  Q
    |||||||||||| | ||||||||||||||| ||| | ||| ||||||||||||||| |||||    
T  33194065 cattaaagaaaaaataatactttggaagtaatgtaacataatattaattgaagggtacaatt 33194126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 33887129 - 33887084
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  33887129 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 33887084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 44512485 - 44512530
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  44512485 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 44512530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 300485 - 300549
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||  || || |||||||||||||||||||||   ||||||||||| ||||    
T  300485 ttacagggggaaaaaccggaaatgacctatattacaggggggtaaaacactattaaccctaaaaa 300549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 174
Target Start/End: Original strand, 3548356 - 3548423
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaagaaa 174  Q
    |||||||||| |||||| ||| |  |||||||||||| |||||||| ||||||||||||  ||||||||    
T  3548356 ttacaggggg-aaaaccgaaaataacctatattacagaggggtaaagacctattaacccaaaaaagaaa 3548423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 182 - 214
Target Start/End: Complemental strand, 4759438 - 4759406
Alignment:
Q  182 gttattttaccaaattatcctaattaactattg 214  Q
    ||||||||||||||||||||| |||||||||||    
T  4759438 gttattttaccaaattatccttattaactattg 4759406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 9650105 - 9650169
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| |||||||||| || | ||||||||| |||||||||   | ||||||||||||||    
T  9650105 ttacagggggaaaaaccaaaaatgacatatattacatgggggtaaagcaccattaacccttaaaa 9650169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 11359514 - 11359455
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||| |||| ||||||||||||| |||||||| || |||||||||  |||||||||||||    
T  11359514 ttacaagggggaaaaccaaaagtgacctatattgca-gggggtaaaggcctattaaccctt 11359455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 113 - 165
Target Start/End: Complemental strand, 12066279 - 12066228
Alignment:
Q  113 gggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||| |||||||| |||||||||||| |||||||| | |||||||||||    
T  12066279 gggcaaaatcaaaagtgacctatattacag-ggggtaaaaaactattaaccct 12066228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 13003896 - 13003956
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||| |||| || ||||||||||| ||||||||||  | ||||||||||    
T  13003896 ttacaggggggaaaacaaaaaatgacctatattacaagggggtaaatcaccattaaccctt 13003956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 14826075 - 14826115
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||||||||||||||||| |  |||||||||||||    
T  14826075 ttacagggggcaaaaccaaaagtgacaaatattacaggggg 14826115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 15093714 - 15093754
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    ||||||||||||||| ||||||| |||||||||| ||||||    
T  15093714 ttacagggggcaaaatcaaaagtaccctatattataggggg 15093754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 27432820 - 27432880
Alignment:
Q  106 ttacagggggcaaaaccaaaag-tgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| |||| |||||  || |||||||||||||| |||||| |||||||||||||    
T  27432820 ttacagggggaaaaatcaaaaaatgacctatattacagggaggtaaagacctattaaccct 27432880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 161
Target Start/End: Original strand, 31173589 - 31173638
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaa 161  Q
    ||||||||||||||||||||  ||||||||||  |||||||| |||||||||    
T  31173589 agggggcaaaaccaaaagtgatctatattaca--ggggtaaagacctattaa 31173638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 49265292 - 49265350
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||||||||||| ||||||||||| | | |||||| |||||||||||||    
T  49265292 ttacaggggg-aaaaccaaaagtgacctatattaca-gagagtaaatgcctattaaccctt 49265350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 49872772 - 49872712
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagg-ggggtaaatacctattaaccct 165  Q
    |||||||||  ||||||| || || ||||||||||||| |||||||| |||||||||||||    
T  49872772 ttacaggggtgaaaaccagaaatgacctatattacagggggggtaaagacctattaaccct 49872712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 98)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 9554155 - 9554319
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  9554155 aaagccatgtaggtgccacatcatagattatgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttt 9554254  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        |||||||||||||||||||||||||||||||||||||| ||||||| |  |||||||||||    
T  9554255 ttttttacagggggcaaaaccaaaagtgccctatattacaggagggtaaagatttattaaccctt 9554319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 11 - 166
Target Start/End: Complemental strand, 11056886 - 11056727
Alignment:
Q  11 gtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatc----tnnnnnnnnnnnt 106  Q
    ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    |           |    
T  11056886 gtaagtgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctgatttttttttttttt 11056787  T
Q  107 tacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  11056786 tacaaggggcaaaaccaaaagtgccttatattacaggggggtaaagacctattaaccctt 11056727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 34158219 - 34158056
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||||||| ||| | ||||| ||||||||||||||||  ||| |  |||||||||| ||||||||||||||||||||||||||||||||            
T  34158219 aaagccatgtatgtgtcacatcatagattctgctgagtcacagggatctgggggcaatcttgaagaatcttcattttacaaggacggaatctaatttttt 34158120  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
       || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  34158119 tttttncagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 34158056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 9553562 - 9553394
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnn 100  Q
    |||||||| || ||| | ||||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||            
T  9553562 aaagccatttaggtggcacatcaaagattatgctgagttattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaa 9553463  T
Q  101 nnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
         ||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  9553462 ataatttacaggaggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacccttaaaa 9553394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 3 - 164
Target Start/End: Original strand, 17764595 - 17764757
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  17764595 aaagccatgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaatt 17764694  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
        ||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||    
T  17764695 ttttttacagggggcaaaaccaaaagtgccctatattacagtggagtaaagacctattaaccc 17764757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 25776401 - 25776492
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  25776401 aaagccatgtaggtgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaattttcattttacaaggacggaatct 25776492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 17763485 - 17763335
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            |||||||||    
T  17763485 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaattttacagggg 17763386  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  17763385 gcaaaaccaaaagtgtcctatattacagaggggtaaagacctattaaccct 17763335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 48170157 - 48170248
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||    
T  48170157 aaagccatgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatct 48170248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 12 - 94
Target Start/End: Original strand, 33767294 - 33767376
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||| ||||||||||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||    
T  33767294 taagtgccgcatcaaagattgtgctgagtcaatgggcttaggggacaatcgtgaagaatcttaattttacaaagacggaatct 33767376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 21819458 - 21819348
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||||| |         |||||||||||| | |||| |||||||||| |||||||||    
T  21819458 ttaaaagaaagagagatgttattttaccaaattatcctaataaactattggtttgtttttcattaaagaaaaaataatattttggaagtaatgtatatag 21819359  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  21819358 tattaattgaa 21819348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 40339634 - 40339512
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtat-ata 262  Q
    |||||||||| ||| |||||||||||||||||||||||||| ||||||||          |||||||||||| | ||||||||||||||||||||| |||    
T  40339634 ttaaaagaaagagaaatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaagaatactttggaagtagtgtataata 40339535  T
Q  263 gtattaattgaagggtgcaattg 285  Q
     ||||||||||||||| ||||||    
T  40339534 atattaattgaagggtacaattg 40339512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 166
Target Start/End: Original strand, 1831894 - 1832038
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaa 119  Q
    ||||| ||||||||||||||||  ||||||||||||||||| ||||||||||| ||||||||||||  ||||||            |||||||||| |||    
T  1831894 catcatagattctgctgagtcacagggcttagggggcaatcttgaagaatctttattttacaaggatagaatctaaaaaaaaaaatttacaggggg-aaa 1831992  T
Q  120 accaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    | |||||||||||||||||||| |||||||||  |||||||||||||    
T  1831993 atcaaaagtgccctatattaca-gggggtaaagccctattaaccctt 1832038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 167 - 285
Target Start/End: Original strand, 29636204 - 29636323
Alignment:
Q  167 aaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatagta 265  Q
    |||||||| ||||||||||||||| |||||||||||||| || |||||          |||||||||||| | |||||||| ||||||||||||||||||    
T  29636204 aaaagaaagagagatgttattttatcaaattatcctaataaattattggtttgtttttcattaaagaaaaaataatactttagaagtagtgtatatagta 29636303  T
Q  266 ttaattgaagggtgcaattg 285  Q
    ||||||||||| || |||||    
T  29636304 ttaattgaaggatgtaattg 29636323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 1589443 - 1589381
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||| |||||    
T  1589443 ttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaactcttaa 1589381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 1031330 - 1031209
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||||||||  |||||||||||| |||| |||||||||          ||||||||||| | |||| ||||||||||||||||||||    
T  1031330 ttaaaagaaagagagatgttatcataccaaattatcataatcaactattgattctttttttattaaagaaaaaataataatttggaagtagtgtatatag 1031231  T
Q  264 tattaattgaagggtgcaattg 285  Q
    |||||||||||| || ||||||    
T  1031230 tattaattgaagagtacaattg 1031209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 10476311 - 10476190
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||| ||||||||||| |||||||||||||| |||||||||          | |||| || | | |||||||||||||||||||||||||    
T  10476311 ttaaaagaaagagaaatgttattttatcaaattatcctaatcaactattgatttgttttttactaaaaaataaataatactttggaagtagtgtatatag 10476212  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  10476211 tattaattgaagggtacaattg 10476190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 276
Target Start/End: Complemental strand, 28289390 - 28289277
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaag-aaaacacaatactttggaagtagtgtatata 262  Q
    |||||| ||| |||||||||||||||||||||||||||||| ||||||| |         |||||||| |||| | ||||||||| ||||||||||||||    
T  28289390 ttaaaataaagagagatgttattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatactttgaaagtagtgtatata 28289291  T
Q  263 gtattaattgaagg 276  Q
    ||||||||||||||    
T  28289290 gtattaattgaagg 28289277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 5219036 - 5219096
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||  |||||||||||||    
T  5219036 ttacagggggcaaaatcaaaagtgacctatattacaggggggtaaaggcctattaaccctt 5219096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 38 - 94
Target Start/End: Complemental strand, 8175011 - 8174955
Alignment:
Q  38 agtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||| ||||||||||    
T  8175011 agtccatgggcttaggggacaatcgtgaagaatcttcattttacaaagacggaatct 8174955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 48168907 - 48168848
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  48168907 ttacagggggcaaaaccaaaagtgccctatattaca-gagggtaaagacctattaaccctt 48168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 24434965 - 24434906
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||| ||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  24434965 ttacagagggcaaaacgaaaagtgcccgatattacaggggggtaaagacctattaaccct 24434906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 278
Target Start/End: Complemental strand, 8604086 - 8604036
Alignment:
Q  228 aaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggt 278  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||    
T  8604086 aaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggt 8604036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 168
Target Start/End: Original strand, 24757995 - 24758053
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||||||||||| ||||  |||||||||||||||||||| ||||||||||||||||    
T  24757995 agggggcaaaaccaatagtgatctatattacaggggggtaaagacctattaacccttaa 24758053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 21237349 - 21237407
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||||||||||||| ||||||||| | |||||||||| ||||||||||||||||    
T  21237349 agggggcaaaaccaaaagtgacctatattata-gggggtaaatgcctattaacccttaaa 21237407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 13405162 - 13405224
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| ||||||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  13405162 cattaaagaaaaaacaatactttgaaagtagtgtaacatagtattaattgaagggtacaattg 13405224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 227 - 285
Target Start/End: Complemental strand, 30312570 - 30312512
Alignment:
Q  227 taaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||| | |||||||||||||||||||||| | ||||||||||||||| ||||||    
T  30312570 taaagaaaaaataatactttggaagtagtgtatacaatattaattgaagggtacaattg 30312512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 35777935 - 35777873
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| |||||||| |||||||||||| ||||||    
T  35777935 cattaaagaaaaaataatactttggaagtagtgtaatatagtactaattgaagggtacaattg 35777873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 45865651 - 45865709
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||||||||| ||||||||||||||||||| |  |||||||||||    
T  45865651 ttacagggggtaaaaccaaaagtgacctatattacaggggggtagaggcctattaaccc 45865709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 166
Target Start/End: Original strand, 1594127 - 1594183
Alignment:
Q  109 cagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||| |||||||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  1594127 caggaggcaaaaccaaaagtgacctatattaca-gggggtaaagacctattaaccctt 1594183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 24133166 - 24133227
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| |||||| ||||| |||||||||||||||||||||| ||||||    
T  24133166 cattaaagaaaaaataatattttggatgtagtatatatagtattaattgaagggtacaattg 24133227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 31418549 - 31418610
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  31418549 attaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 31418610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 40753465 - 40753525
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||||| ||| ||||||    
T  40753465 cattaaagaaaa-ataatactttgaaagtagtgtatatagtattaattgaatggtacaattg 40753525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 42509038 - 42509098
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||||||||||||||||||||||||||||| | |||||||   |||||||||||||    
T  42509038 ttacagggggcaaaaccaaaagtgccctatattaca-gagggtaaaacactattaaccctta 42509098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 8175970 - 8176030
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||||||| || ||||||||||||| |||||   ||||||||||||    
T  8175970 ttacagggggcaaaaccaaaagtaccttatattacaggggagtaaaactctattaaccctt 8176030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 13286865 - 13286929
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||| || || ||||||||||| ||||||||| ||||||||||||| ||||    
T  13286865 ttacaggggggaaaaccagaaatgacctatattacaagggggtaaagacctattaaccctaaaaa 13286929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 24436305 - 24436372
Alignment:
Q  27 agattctgctgagtca-atgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| ||||| | ||||||||||| ||| ||||||| ||||||||||||||||||||    
T  24436305 agattctgctgagtcatatggg-tcagggggcaatcctgaggaatctttattttacaaggacggaatct 24436372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 1830949 - 1830882
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||| |||||  ||||| |||| |||||| ||||||||||| ||||||||| ||||||||||    
T  1830949 agattctgctaagtcacagggctcagggagcaatcttgaagaatctttattttacaaagacggaatct 1830882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 112 - 167
Target Start/End: Complemental strand, 23161152 - 23161097
Alignment:
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||| ||||||||||||  ||||||||||||| ||||||| |||||||||||||||    
T  23161152 ggggaaaaaccaaaagtaacctatattacaggagggtaaagacctattaaccctta 23161097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 35891144 - 35891077
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||  ||| | ||||||||||| ||||||||||| ||||||||| |||| |||||    
T  35891144 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaagacgaaatct 35891077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 278
Target Start/End: Complemental strand, 37815880 - 37815785
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | ||||||||| ||||||||| | |||||||||||||||||||    
T  37815880 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggt 37815785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 1742107 - 1742045
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||| | ||||||||||||||||||| ||||||    
T  1742107 cattaaagaaaaaataatactttgaaagtagtgtaacatagtattaattgaagggtacaattg 1742045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 225 - 275
Target Start/End: Complemental strand, 7759374 - 7759324
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaag 275  Q
    ||||||||||| | ||||||||| |||||||||||||| ||||||||||||    
T  7759374 attaaagaaaaaataatactttgaaagtagtgtatataatattaattgaag 7759324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 34012632 - 34012582
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||| | | |||||||||||||||||||||||||| |||||||||    
T  34012632 ttaaaagaaagataaatgttattttaccaaattatcctaatcaactattga 34012582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 42879969 - 42880031
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||| ||||||||||||||| | ||||||||||||||||||| ||||||    
T  42879969 cattaaagaaaaaataattctttggaagtagtgtaacatagtattaattgaagggtacaattg 42880031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 278
Target Start/End: Complemental strand, 48843730 - 48843613
Alignment:
Q  165 ttaaaagaaatagagatgttatttt--accaaattatcctaattaactatt-gannnnnnnncattaaag-aaaacacaatactttggaagtagtgtata 260  Q
    |||||||||| ||||||||||||||  |||||||||||||||| ||||||| |         |||||||| |||| | ||||| ||||||||||||||||    
T  48843730 ttaaaagaaagagagatgttattttacaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataatacgttggaagtagtgtata 48843631  T
Q  261 tagtattaattgaagggt 278  Q
    ||||||||| | ||||||    
T  48843630 tagtattaaattaagggt 48843613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 10659960 - 10660005
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  10659960 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaa 10660005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 147
Target Start/End: Original strand, 11058170 - 11058211
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggggg 147  Q
    ||||||| ||||||||||||||| ||||||||||||||||||    
T  11058170 ttacaggaggcaaaaccaaaagtaccctatattacagggggg 11058211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 13771704 - 13771631
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||  | || || ||||||||| ||||||||||| |||||| ||| ||| |||||    
T  13771704 catcaaagattctgctgagtcatagtgcatatggggcaatcttgaagaatctttattttataagaacgaaatct 13771631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 145
Target Start/End: Complemental strand, 17237464 - 17237346
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  | |||||           |||||||||  ||||||||||    
T  17237464 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtgaaatctaaattttttttttacaggggctaaaaccaaaa 17237365  T
Q  127 gtgccctatattacagggg 145  Q
    |||| ||||||||||||||    
T  17237364 gtgcactatattacagggg 17237346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 24780294 - 24780343
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||||||||||||||| |||||||||||||  |||||||    
T  24780294 ttaaaagaaaaagagatgttattttactaaattatcctaatctactattg 24780343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 33682627 - 33682590
Alignment:
Q  241 tactttggaagtagtgtatatagtattaattgaagggt 278  Q
    |||||||||||||||||||| |||||||||||||||||    
T  33682627 tactttggaagtagtgtataaagtattaattgaagggt 33682590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 34012256 - 34012215
Alignment:
Q  244 tttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| |||||||||||||||||||||| ||||||    
T  34012256 tttggaagtagtttatatagtattaattgaagggtacaattg 34012215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 165
Target Start/End: Original strand, 1676411 - 1676451
Alignment:
Q  125 aagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||| ||||||||||||||||||||| |||||||||||||    
T  1676411 aagtgacctatattacaggggggtaaaaacctattaaccct 1676451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 12814652 - 12814592
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||  ||||||| || || ||||||||||||||| ||||| ||||||||||||||    
T  12814652 ttacaggggagaaaaccacaaatgacctatattacaggggagtaaagacctattaaccctt 12814592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 48945241 - 48945182
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||| ||||||||||||||| || ||||||||||| | ||||||| ||||||||||||||    
T  48945241 ttacaaggggcaaaaccaaaaatgacctatattaca-gagggtaaaaacctattaaccctt 48945182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 1492818 - 1492759
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| |||||||||| || ||||||||||| |||||||||   |||||||||||    
T  1492818 ttacaggggggaaaaccaaaaatgacctatattacaagggggtaaagcactattaaccct 1492759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 200
Target Start/End: Complemental strand, 4268828 - 4268793
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatc 200  Q
    |||||||||| |||||||||||||||||||||||||    
T  4268828 ttaaaagaaagagagatgttattttaccaaattatc 4268793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 13772962 - 13773025
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    ||||| |||| ||||| ||||||| ||||||||||| |||||||||   |||||||||||||||    
T  13772962 ttacaagggggaaaactaaaagtgtcctatattacaagggggtaaagctctattaacccttaaa 13773025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 118 - 165
Target Start/End: Original strand, 15037417 - 15037464
Alignment:
Q  118 aaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||| || || ||||||||||||||||||||| |||||||||||||    
T  15037417 aaaccagaaatgacctatattacaggggggtaaagacctattaaccct 15037464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 17238206 - 17238273
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  17238206 agattctgctgactcattggggtgaggggtcaatcctgaagaatcttcatttttcaagggtggaatct 17238273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 18270743 - 18270693
Alignment:
Q  165 ttaaaagaaatagagatg-ttattttaccaaattatcctaattaactattga 215  Q
    |||||||||||||| ||| |||||||||||||||||||| ||||||||||||    
T  18270743 ttaaaagaaataga-atgattattttaccaaattatccttattaactattga 18270693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 117 - 168
Target Start/End: Original strand, 19272460 - 19272510
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||| || ||||||||||| ||||||||| ||||||||||||||||    
T  19272460 aaaaccaaaaatgacctatattaca-gggggtaaagacctattaacccttaa 19272510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 20041135 - 20041194
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||| | ||||||  || || ||||||||||||||||||||| |||||||||||||    
T  20041135 ttacagggtggaaaaccggaaatgacctatattacaggggggtaaaaacctattaaccct 20041194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 224 - 278
Target Start/End: Complemental strand, 22298112 - 22298057
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    |||||||||||| | ||||||||||||||||||| | |||||||||| ||||||||    
T  22298112 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaactgaagggt 22298057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 226 - 277
Target Start/End: Complemental strand, 31196683 - 31196632
Alignment:
Q  226 ttaaagaaaacacaatactttggaagtagtgtatatagtattaattgaaggg 277  Q
    |||||||||| | ||||||||| || ||||||||||| ||||||||||||||    
T  31196683 ttaaagaaaaaataatactttgaaattagtgtatataatattaattgaaggg 31196632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 31433559 - 31433626
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  31433559 agattctgctgactcattggggtgaggggtcaatcctgaagaatcttcatttttcaagggtggaatct 31433626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 37413856 - 37413789
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||  || |||| | ||||| ||||| ||||||||||||||||| |||||| |||||||    
T  37413856 agattctgctgacacattggggtgaggggtcaatcctgaagaatcttcatttttcaaggatggaatct 37413789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 166
Target Start/End: Complemental strand, 38192995 - 38192960
Alignment:
Q  131 cctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||||| ||||||||||||||    
T  38192995 cctatattacaggggggtaaagacctattaaccctt 38192960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 179 - 214
Target Start/End: Original strand, 45499814 - 45499849
Alignment:
Q  179 gatgttattttaccaaattatcctaattaactattg 214  Q
    |||| |||||||||||||||||||||||||||||||    
T  45499814 gatgctattttaccaaattatcctaattaactattg 45499849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 86
Target Start/End: Complemental strand, 47637853 - 47637794
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagga 86  Q
    |||||||| |||||||  ||| | ||||||||||| ||||||||||| ||||||||||||    
T  47637853 agattctgatgagtcataggggtcagggggcaatcatgaagaatctttattttacaagga 47637794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 13279417 - 13279474
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| |||||| ||| || ||||||||||| ||||||||| ||||||||||||    
T  13279417 ttacagggggaaaaaccgaaaatgacctatattaca-gggggtaaagacctattaaccc 13279474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 33939785 - 33939831
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| ||||||||||| ||||||||||| ||| ||||||    
T  33939785 aatactttggaattagtgtatataatattaattgaatggtacaattg 33939831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 45948665 - 45948727
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| |||||||||| ||||  ||||||||||||||||||| ||||||    
T  45948665 cattaaagaaaaaataatattttggaagtaatgtaacatagtattaattgaagggtacaattg 45948727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 47187827 - 47187777
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||| |||  |||||||||||||||||||||| ||||| ||||||    
T  47187827 ttaaaagaaagagaattgttattttaccaaattatccttattaattattga 47187777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 75
Target Start/End: Complemental strand, 48168969 - 48168915
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttca 75  Q
    ||||| ||||||||||||||||  ||||| ||||||||||| |||||||| ||||    
T  48168969 catcatagattctgctgagtcacagggctcagggggcaatcttgaagaatgttca 48168915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 5217822 - 5217761
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||||||||  ||| ||| ||||||||| |||||||||||  | ||||||||||||    
T  5217822 ttacagggggcaaaaaaaaatgtgacctatattataggggggtaaaggcatattaaccctta 5217761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 6563394 - 6563443
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| ||| ||||||||||| |||||||||||||| ||| ||||    
T  6563394 ttaaaagaaagagacatgttattttatcaaattatcctaatcaaccattg 6563443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 7335456 - 7335411
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaact 210  Q
    |||||||||| | ||||||||||||||||||||||| |||| ||||    
T  7335456 ttaaaagaaagaaagatgttattttaccaaattatcataatcaact 7335411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 8174932 - 8174888
Alignment:
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctatta 160  Q
    |||||||||||| ||||||||||||||| |||||||| ||||||||    
T  8174932 gcaaaaccaaaaatgccctatattacag-ggggtaaagacctatta 8174888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 94
Target Start/End: Complemental strand, 9113410 - 9113345
Alignment:
Q  29 attctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  9113410 attctgctgactcattggggtgaggggccaatcttgaagaatcttcatttttcaagggtggaatct 9113345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 12983130 - 12983179
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  12983130 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 12983179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 18292500 - 18292451
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  18292500 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 18292451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 19105037 - 19105098
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||  |||  ||||| |||||||||||||||||||||||| ||||||    
T  19105037 cattaaagaaaaaataatgttttaaaagtaatgtatatagtattaattgaagggtacaattg 19105098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 22335519 - 22335563
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  22335519 ttacaggggg-aaaaccaaaaatgacctatattacaggggggtaaa 22335563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 24205026 - 24204981
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||  || |||||||||||||||||||||    
T  24205026 ttacaggggggaaaaccaaatatgacctatattacaggggggtaaa 24204981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 24205203 - 24205248
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  24205203 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 24205248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 65 - 94
Target Start/End: Complemental strand, 24435011 - 24434982
Alignment:
Q  65 aagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||||||||||    
T  24435011 aagaatcttcattttacaaggacggaatct 24434982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 28157077 - 28157036
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||| |||||||||| || |||||||||||||||||||||    
T  28157077 aggggggaaaaccaaaaatgacctatattacaggggggtaaa 28157036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 181 - 214
Target Start/End: Complemental strand, 42286057 - 42286024
Alignment:
Q  181 tgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||||||||||||||| |||||||||||    
T  42286057 tgttattttaccaaattatccttattaactattg 42286024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #90
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 147
Target Start/End: Complemental strand, 46459041 - 46459000
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggggg 147  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  46459041 ttacaggaggcaaaaccaaaagtgtcatatattacagggggg 46459000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 12977672 - 12977720
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt 213  Q
    |||||||||| |||   ||||||||||||||||||||| ||||||||||    
T  12977672 ttaaaagaaagagaatggttattttaccaaattatccttattaactatt 12977720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 13797447 - 13797415
Alignment:
Q  133 tatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||||||||||| |||||||||||||    
T  13797447 tatattacaggggggtaaagacctattaaccct 13797415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #93
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 14187911 - 14187971
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||  ||||| ||| || |||||||||||||||||||||   ||||||||||||    
T  14187911 ttacagggggtcaaaccgaaaatgacctatattacaggggggtaaaacactattaaccctt 14187971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #94
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 19336100 - 19336060
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  19336100 ttacaggggggaaaaccaaaaatgacctatattacaggggg 19336060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #95
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 214
Target Start/End: Original strand, 21752088 - 21752136
Alignment:
Q  166 taaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    ||||||||| | | |||||||||||||||||||| ||||| ||||||||    
T  21752088 taaaagaaagaaaaatgttattttaccaaattattctaatcaactattg 21752136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #96
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 24204870 - 24204818
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctat 158  Q
    |||||||| | |||||| ||| || ||||||||||||||||||||| ||||||    
T  24204870 ttacagggtggaaaaccgaaaatgacctatattacaggggggtaaagacctat 24204818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #97
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 24555762 - 24555702
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||| || |||| || || || ||||||||||||| ||||||| ||||||||||||||    
T  24555762 ttacaggtggaaaaatcagaaatgacctatattacaggagggtaaagacctattaaccctt 24555702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #98
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 110 - 166
Target Start/End: Complemental strand, 33757463 - 33757408
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||| |||| |||||||| |||||||||||| |||||||| | ||||||||||||    
T  33757463 aggggggaaaatcaaaagtgacctatattacag-ggggtaaagatctattaaccctt 33757408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 91; Significance: 4e-44; HSPs: 84)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 39809982 - 39810145
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  39809982 aaagccatgtaggtgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 39810081  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  39810082 taatttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 39810145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 3 - 165
Target Start/End: Complemental strand, 1601832 - 1601672
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| |            
T  1601832 aaagccatgtaggtgccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttactaggacggaattt--aatttt 1601735  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
       ||| ||||||||||||||||||||||||||||||||| ||||||||   |||||||||||    
T  1601734 tttttatagggggcaaaaccaaaagtgccctatattacagaggggtaaaggtctattaaccct 1601672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 27163278 - 27163114
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  27163278 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaat 27163179  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  27163178 ttttttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccctt 27163114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 6 - 168
Target Start/End: Original strand, 27164557 - 27164719
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||               
T  27164557 gccatgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaat 27164656  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
     |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||    
T  27164657 tttacagggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaacctttaa 27164719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 1601149 - 1601312
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnn 100  Q
    ||||||||||| || || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||            
T  1601149 aaagccatgtaggttccacatcaaagattctgctgagtcactgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaaaaaaaa 1601248  T
Q  101 nnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
         ||||| ||||||||| |||||||| ||||||||| |||||||||||  ||||||||||||    
T  1601249 aatatttaca-ggggcaaaatcaaaagtgtcctatattagaggggggtaaaggcctattaaccct 1601312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 42349109 - 42348961
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacaggggg 115  Q
    |||| ||||| ||||||||||||||||  ||| | ||||| ||||| |||||||||||||||||||||||||||||| |           ||||||||||    
T  42349109 tgccacatcatagattctgctgagtcacagggttcaggggacaatcttgaagaatcttcattttacaaggacggaatttaaaaagaaaaattacaggggg 42349010  T
Q  116 caaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  42349009 caaaaccaaaagtgccctatattacaggggggtaaagacctattaaccc 42348961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 1600224 - 1600077
Alignment:
Q  15 gtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggg 114  Q
    ||||| ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||| |||||||||||||           ||| |||||    
T  1600224 gtgccacatcaaagattctgctgagtcaattagcttagggggcaatcgtgaagaatcttcattttataaggacggaatct-aattttttttttatagggg 1600126  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||| | ||||||||| ||||||||| ||||||||||||    
T  1600125 gcaaaaccaaaagtggcttatattaca-gggggtaaagacctattaaccc 1600077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 1602794 - 1602885
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| ||||||||||||||||    
T  1602794 aaagcaatgtaggtgccacatcaaagattctgctgagtcactgggtttagggggcaatcgtgaagaatcttcattatacaaggacggaatct 1602885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 42350073 - 42350237
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    |||| |||||| ||||| ||||| |||||||||| |||||  | ||| || |||||||| ||||||||||||||||||||||||||||||||            
T  42350073 aaagtcatgtaggtgccacatcatagattctgctaagtcacagagctcagtgggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 42350172  T
Q  103 nnntt-acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
       || ||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||    
T  42350173 aaatttacagggggcaaaaccaaaaatgctctatattacaggggggtaaagacctattaaccctt 42350237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 39808796 - 39808649
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||| ||||||            |||||||||    
T  39808796 tgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacagaatctaaatttttttttttacagggg 39808697  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||||||  |||||||| ||||||||||||    
T  39808696 gcaaaaccaaaagtgccctatattaca--ggggtaaagacctattaaccc 39808649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 3252306 - 3252167
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaa 120  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||           |||||||||||||||    
T  3252306 catcagagattctactgagtcaatgggcttagggggcaatcgtgaagaatctttattttataaggacggaatct-aaataaaaaattacagggggcaaaa 3252208  T
Q  121 ccaaaagtgccctatattacaggggggtaaatacctattaa 161  Q
    || ||||| |||||||||| || ||||||||  ||||||||    
T  3252207 ccgaaagtaccctatattatagaggggtaaaggcctattaa 3252167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 24 - 94
Target Start/End: Original strand, 39913851 - 39913921
Alignment:
Q  24 caaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  39913851 caaagattttgctgagtcaatggacttatggggcaatcgtgaagaatcttcattttacaaggacggaatct 39913921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 13367986 - 13368047
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||||    
T  13367986 cattaaagaaaaaataatactttggaagtagtgtatataatattaattgaagggtgcaattg 13368047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 39463374 - 39463313
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||||    
T  39463374 cattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaagggtacaattg 39463313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 34156710 - 34156589
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    ||||||||||||||| |||||||||| ||||||||| |||| ||| ||||          |||||||||||| | |||| ||||||||||||||| ||||    
T  34156710 ttaaaagaaatagagctgttattttatcaaattatcataatcaaccattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtacatag 34156611  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  34156610 tattaattgaagggtacaattg 34156589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 22 - 170
Target Start/End: Original strand, 28575027 - 28575175
Alignment:
Q  22 atcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntta-cagggggcaaaa 120  Q
    |||||||||||||||||||||  | || ||| |||||||| ||||||||||| |||||| ||||||| |||||           ||  ||||||| ||||    
T  28575027 atcaaagattctgctgagtcacagtgcatagtgggcaatcttgaagaatctttattttataaggacgaaatctaaaaaaaaaaatttgcaggggg-aaaa 28575125  T
Q  121 ccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||||||||||||||||| ||||||  |||||||||||| ||||    
T  28575126 ccaaaagtgccctatattacagggtggtaaagtcctattaaccctaaaaa 28575175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 165 - 276
Target Start/End: Original strand, 40399855 - 40399967
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||| ||||||||||||||||||||| |||| ||||||| |         |||||||||||| | ||||||||| ||||||||||||||     
T  40399855 ttaaaagaaagagatatgttattttaccaaattatcataatcaactattagtttgtttttcattaaagaaaaaataatactttgaaagtagtgtatataa 40399954  T
Q  264 tattaattgaagg 276  Q
    |||||||||||||    
T  40399955 tattaattgaagg 40399967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 15750307 - 15750432
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaag-aaaacacaatactttggaagtagtgtatata 262  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||| |         |||||||| |||| | ||||||||||||||||||||||||    
T  15750307 ttaaaagaaagagagatattattttaccaaattatcctaatcaactattggtttatttttcattaaagaaaaaaataatactttggaagtagtgtatata 15750406  T
Q  263 g---tattaattgaagggtgcaattg 285  Q
    |   ||||||||||||||| ||||||    
T  15750407 gtattattaattgaagggtacaattg 15750432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 31985065 - 31985010
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  31985065 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 31985010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 39513924 - 39513866
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||||    
T  39513924 ttacagggggcaaaaccaaaagtgacctatattacag-ggggtaaatgcctattaaccct 39513866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 28561933 - 28562006
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||  | || |||| | ||||| ||||||||||| ||||||||||||||||||||    
T  28561933 catcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatct 28562006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 28567431 - 28567504
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||||||||  | || |||| | ||||| ||||||||||| ||||||||||||||||||||    
T  28567431 catcaaagattctgctgagtcacagtgcataggtgacaatcttgaagaatctttattttacaaggacggaatct 28567504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 28574682 - 28574609
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||||||||  ||| | ||||||||||| ||||||||||| |||||| |||||||||||||    
T  28574682 catcatagattctgctgagtcacagggttcagggggcaatcttgaagaatctttattttaaaaggacggaatct 28574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 276
Target Start/End: Complemental strand, 6374575 - 6374476
Alignment:
Q  178 agatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagg 276  Q
    ||||||||||||||||||||||| |||| ||||||| |         |||||||||||| | ||||||||||||||| |||||||| |||||||||||||    
T  6374575 agatgttattttaccaaattatcataatcaactattagtttgtttttcattaaagaaaaaataatactttggaagtaatgtatataatattaattgaagg 6374476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 31986228 - 31986287
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattaca-ggggggtaaatacctattaaccc 164  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||    
T  31986228 ttacagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 31986287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 2270291 - 2270348
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||| |||||| |||| ||||||||| ||||||||||||    
T  2270291 ttacagggggcaaaaccaaaagtgacctataataca-gggggtaaagacctattaaccc 2270348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 6819253 - 6819195
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| ||||||||||||| |||||||| ||||||||||||  |||||||||||    
T  6819253 ttacaggggggaaaaccaaaagtgacctatattgcaggggggtaaaggcctattaaccc 6819195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 19574503 - 19574441
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgta-tatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  19574503 cattaaagaaaaaataatattttggaagtagtgtaatatagtattaattgaagggtacaattg 19574441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 34796659 - 34796777
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||| ||||||||||| |||||||||||||| ||||||| |         ||||||| |||| | ||||||||||||||||||||||||     
T  34796659 ttaaaagaaagagatatgttattttatcaaattatcctaatcaactattggtttgtttttcattaaa-aaaaaataatactttggaagtagtgtatata- 34796756  T
Q  264 tattaattgaagggtgcaattg 285  Q
     |||||||||||||| ||||||    
T  34796757 -attaattgaagggttcaattg 34796777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 40702010 - 40702071
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||  |||||||||||||||    
T  40702010 ttacagggggcaaaacgaaaagtgacctatattaca-gggggtaaaggcctattaacccttaa 40702071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 45358932 - 45358982
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    |||||||||||| | |||||||||||||||||||||||| |||||||||||    
T  45358932 cattaaagaaaaaataatactttggaagtagtgtatataatattaattgaa 45358982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 94
Target Start/End: Original strand, 5704444 - 5704517
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| |||| |||||||||||  ||||| |||||| |||| ||||||||||| |||||||||||||| |||||    
T  5704444 catcatagatactgctgagtcacagggctcagggggtaatcttgaagaatctttattttacaaggacgaaatct 5704517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 16434468 - 16434586
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||||||| |||| | ||||| || || ||||||||||||||||| |||||  |||||||           |||||||||  ||||||||||    
T  16434468 agattctgctgagtcattggggtgaggggccagtcctgaagaatcttcatttttcaagggtggaatctaatttttttttttacaggggctaaaaccaaaa 16434567  T
Q  127 gtgccctatattacagggg 145  Q
    |||| ||||||||||||||    
T  16434568 gtgcactatattacagggg 16434586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 34901559 - 34901503
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  34901559 ttacagggggcaaaaccaaaagtgacctatattacag-ggggtaaaagcctattaacc 34901503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 169 - 268
Target Start/End: Complemental strand, 515048 - 514948
Alignment:
Q  169 aagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagtatt 267  Q
    |||||| ||||||||||||||| |||||||||||||| ||||||| |         ||||| |||||| | ||||||| |||||||||||||||||||||    
T  515048 aagaaagagagatgttattttagcaaattatcctaatcaactattggtttgtttttcattatagaaaatataatacttcggaagtagtgtatatagtatt 514949  T
Q  268 a 268  Q
    |    
T  514948 a 514948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 25 - 161
Target Start/End: Complemental strand, 5703192 - 5703055
Alignment:
Q  25 aaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaaacca 123  Q
    ||||||||| ||||||||  | || |||||| ||||| ||||||||||| |||||||||||||| |||||            |||||  ||| ||||| |    
T  5703192 aaagattcttctgagtcacagtgcataggggacaatcttgaagaatctttattttacaaggacgaaatctaaaaaaaaaaatttacactggggaaaacta 5703093  T
Q  124 aaagtgccctatattacaggggggtaaatacctattaa 161  Q
    ||||||||||||||||||||||||||||  ||||||||    
T  5703092 aaagtgccctatattacaggggggtaaagccctattaa 5703055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 11424336 - 11424400
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| |||||||||| || |||||||||||||||||||||   | ||||||||||||||    
T  11424336 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaagcaccattaacccttaaaa 11424400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 27543468 - 27543409
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||| ||| || ||||||||||||||||||||| ||||||||||||||    
T  27543468 ttacaggggg-aaaaccgaaaatgacctatattacaggggggtaaagacctattaaccctt 27543409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 162
Target Start/End: Original strand, 34902737 - 34902793
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaac 162  Q
    |||||||||| ||||||||||||  ||||||||||||||| |||||| |||||||||    
T  34902737 ttacaggggggaaaaccaaaagtaacctatattacaggggtgtaaatgcctattaac 34902793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 164
Target Start/End: Original strand, 37403461 - 37403517
Alignment:
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||| ||||||||||||| |||||||| ||||| ||||||| |||||||||||    
T  37403461 acaggggggaaaaccaaaagtgacctatattgcagggaggtaaatgcctattaaccc 37403517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 113 - 164
Target Start/End: Complemental strand, 2269093 - 2269042
Alignment:
Q  113 gggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||||| ||||||||||| || |||||| ||||||||||||    
T  2269093 gggcaaaaccaaaagtgacctatattacaaggaggtaaagacctattaaccc 2269042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 16432748 - 16432681
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  16432748 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatct 16432681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 21397802 - 21397869
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||  ||| |||||| |||| | ||||||||||| |||||||||||||| |||||    
T  21397802 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttattttacaaggacgaaatct 21397869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 21792295 - 21792362
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||||||  ||| |||||| |||| | ||||||||||| |||||||||||||| |||||    
T  21792295 agattctgctgagtcataggggttagggtgcaaccttgaagaatctttattttacaaggacgaaatct 21792362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 285
Target Start/End: Original strand, 5295459 - 5295505
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||| ||||||||||||||||||| ||||||||||||||| ||||||    
T  5295459 aatattttggaagtagtgtatataatattaattgaagggtacaattg 5295505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 277
Target Start/End: Original strand, 9880538 - 9880592
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaaggg 277  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||    
T  9880538 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaaggg 9880592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Original strand, 31899245 - 31899347
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | ||||||||||||||||||| | ||| |||||||||||| || |||    
T  31899245 attttaccaaattatcctaatcaactattgatttgtttttcattaaagaaaagataatactttggaagtagtgtaacataatattaattgaagagtacaa 31899344  T
Q  283 ttg 285  Q
    |||    
T  31899345 ttg 31899347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 274
Target Start/End: Complemental strand, 42179270 - 42179160
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| || |||| |||||||| |||||||| |||||||||||| |         |||||||||||| | ||||||||  || ||||||||||||    
T  42179270 ttaaaagaaagagtgatgatattttactaaattatcataattaactattagtttgtttttcattaaagaaaaaataatacttttaaaatagtgtatatag 42179171  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  42179170 tattaattgaa 42179160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 9812348 - 9812299
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||| ||| | |||||||||||||||||||||||||||| ||||||||    
T  9812348 ttaaaataaagaaagatgttattttaccaaattatcctaatcaactattg 9812299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 13496413 - 13496364
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| | |||||||||||||||||||||||||||| || |||||    
T  13496413 ttaaaagaaagaaagatgttattttaccaaattatcctaatcaattattg 13496364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 133 - 170
Target Start/End: Complemental strand, 24970994 - 24970957
Alignment:
Q  133 tatattacaggggggtaaatacctattaacccttaaaa 170  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  24970994 tatattacaggggggtaaagacctattaacccttaaaa 24970957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 214
Target Start/End: Complemental strand, 41679487 - 41679438
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||| |||||||||||||||||||| |||| ||||||||    
T  41679487 ttaaaagaaagagaggtgttattttaccaaattatcataatcaactattg 41679438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 268
Target Start/End: Original strand, 14234193 - 14234297
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    ||||| |||| ||| |||||||||| ||||||||||||||| ||||||||          | |||||||||| | |||| ||||||||||||||||||||    
T  14234193 ttaaacgaaagagatatgttattttgccaaattatcctaatcaactattggtttgtttttcgttaaagaaaaaataatattttggaagtagtgtatatag 14234292  T
Q  264 tatta 268  Q
    |||||    
T  14234293 tatta 14234297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 6105669 - 6105626
Alignment:
Q  51 agggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||    
T  6105669 agggggcaatcctgaagaatctttattttacaagtacggaatct 6105626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 285
Target Start/End: Complemental strand, 19438337 - 19438290
Alignment:
Q  239 aatactttggaagtagtgta-tatagtattaattgaagggtgcaattg 285  Q
    |||| ||||||||||||||| |||||||||||||||||||| ||||||    
T  19438337 aatattttggaagtagtgtaatatagtattaattgaagggtacaattg 19438290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 169
Target Start/End: Complemental strand, 29309622 - 29309560
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||||| ||||||  || || |||||||||||||||| |||| |||||||||||||||||    
T  29309622 ttacaggggggaaaaccggaaatgacctatattacaggggg-taaagacctattaacccttaaa 29309560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 32901497 - 32901564
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  32901497 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatct 32901564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 4760596 - 4760657
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||||  ||||||||||||||||||| ||||||    
T  4760596 cattaaagaaaa-ataatactttgaaagtagtgtaacatagtattaattgaagggtacaattg 4760657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 4989594 - 4989532
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||| ||||||||| | ||| ||||||||||||||| ||||||    
T  4989594 cattaaagaaaaaataatactttgtaagtagtgtaacataatattaattgaagggtacaattg 4989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 167
Target Start/End: Original strand, 6820092 - 6820142
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    ||||| ||||||| |||||||| ||||||||||||  ||||||||||||||    
T  6820092 aaaactaaaagtgacctatattgcaggggggtaaaggcctattaaccctta 6820142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 132 - 166
Target Start/End: Original strand, 24971203 - 24971237
Alignment:
Q  132 ctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||| ||||||||||||||    
T  24971203 ctatattacaggggggtaaagacctattaaccctt 24971237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 39698703 - 39698765
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| |||||||||| ||||  ||||||||||||||||||| ||||||    
T  39698703 cattaaagaaaaaataatattttggaagtaatgtaacatagtattaattgaagggtacaattg 39698765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 41565328 - 41565270
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||  | ||| || | ||||||||||||||||||| ||||||||||||    
T  41565328 ttacagggggcaaactcgaaaatgacatatattacaggggggtaaagacctattaaccc 41565270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 5160499 - 5160544
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  5160499 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 5160544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 166
Target Start/End: Complemental strand, 7988823 - 7988790
Alignment:
Q  133 tatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||||||||||||||||||||    
T  7988823 tatattacagaggggtaaatacctattaaccctt 7988790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 9768304 - 9768349
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    ||||||||| ||||| |||||||| |||||||||||||||| ||||    
T  9768304 ttacaggggacaaaatcaaaagtgacctatattacagggggctaaa 9768349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 167
Target Start/End: Complemental strand, 12478631 - 12478570
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||||| ||||||  || || |||||||||||||||||||||   |||||||||||||    
T  12478631 ttacagggggtaaaaccggaaatgacctatattacaggggggtaaaacactattaaccctta 12478570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 274
Target Start/End: Complemental strand, 13496333 - 13496300
Alignment:
Q  241 tactttggaagtagtgtatatagtattaattgaa 274  Q
    |||||||||||||||||||| |||||||||||||    
T  13496333 tactttggaagtagtgtatacagtattaattgaa 13496300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 15160434 - 15160483
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  15160434 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 15160483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 20076384 - 20076429
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||| ||||    
T  20076384 ttacaggggggaaaaccaaaaatgacctatattacagggggataaa 20076429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 248 - 285
Target Start/End: Original strand, 29312255 - 29312292
Alignment:
Q  248 gaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||||||||||||||||||| || ||||||    
T  29312255 gaagtagtgtatatagtattaattgaagagtacaattg 29312292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 168
Target Start/End: Original strand, 30112919 - 30112956
Alignment:
Q  131 cctatattacaggggggtaaatacctattaacccttaa 168  Q
    |||||||||||||||| |||||||||||||||| ||||    
T  30112919 cctatattacagggggataaatacctattaaccgttaa 30112956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 151
Target Start/End: Complemental strand, 31343418 - 31343377
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||| |||||||||| || |||||||||||||||||||||    
T  31343418 aggggggaaaaccaaaaatgacctatattacaggggggtaaa 31343377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 37611481 - 37611526
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  37611481 ttacaggggggaaaacaaaaaatgacctatattacaggggggtaaa 37611526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 45530738 - 45530783
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| |  |||||||||||||||||||||    
T  45530738 ttacaggggggaaaaccaaaaataacctatattacaggggggtaaa 45530783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 3912313 - 3912246
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaagaaa 174  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| |||| |||||||  ||||||||    
T  3912313 ttacaggggg-aaaaccggaaatgacctatattacaggggggtaaagacctgttaacccaaaaaagaaa 3912246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 6146500 - 6146444
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaa 83  Q
    |||||||||||| |||| | ||||| ||||||||  ||||||||||| |||||||||    
T  6146500 agattctgctgaatcaaagagcttaaggggcaattatgaagaatctttattttacaa 6146444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 11830493 - 11830553
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||||  || || |||||||||||||||||||||   ||||||||||||    
T  11830493 ttacaggggggaaaaccggaaatgacctatattacaggggggtaaaacactattaaccctt 11830553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 15227667 - 15227631
Alignment:
Q  239 aatactttggaagtagtgtatatagtattaattgaag 275  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  15227667 aatactttgaaagttgtgtatatagtattaattgaag 15227631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 25653761 - 25653721
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  25653761 ttacaggggggaaaaccaaaaatgacctatattacaggggg 25653721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 146
Target Start/End: Complemental strand, 28561479 - 28561451
Alignment:
Q  118 aaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||||||||||||||||||||||    
T  28561479 aaaccaaaagtgccctatattacaggggg 28561451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 118 - 146
Target Start/End: Complemental strand, 28566977 - 28566949
Alignment:
Q  118 aaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||||||||||||||||||||||    
T  28566977 aaaccaaaagtgccctatattacaggggg 28566949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 31343602 - 31343642
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| ||||||||||||| ||||||||||| ||||    
T  31343602 ttacaggggggaaaaccaaaagtgacctatattacatgggg 31343642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 41708885 - 41708845
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  41708885 ttacagggggaaaaaccaaaaatgacctatattacaggggg 41708845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 89; Significance: 7e-43; HSPs: 2)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 65938 - 66102
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnn 100  Q
    ||||||| ||||||||| | ||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            
T  65938 aaagccacgtaagtgccacctcggagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctaatttttt 66037  T
Q  101 nnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
         |||||||||||||||||||||||| | ||||||||||||||||||| |||||||||||||    
T  66038 tttttttacagggggcaaaaccaaaagtgtcatatattacaggggggtaaagacctattaaccct 66102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 64640 - 64503
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    ||||||||||||||||  ||| | ||||||||||| ||||||||||| |||||||||||||| |||||           |||||||||||||||||||||    
T  64640 agattctgctgagtcacaggggtcagggggcaatcctgaagaatctttattttacaaggacgaaatctaaaaaaaaaaattacagggggcaaaaccaaaa 64541  T
Q  127 gtgccctatattacaggggggtaaatacctattaaccc 164  Q
    || |||||||||||||||||||||| ||||||||||||    
T  64540 gtaccctatattacaggggggtaaagacctattaaccc 64503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 3e-42; HSPs: 86)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 11956301 - 11956133
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  11956301 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 11956202  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
        ||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  11956201 aattttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttaaaa 11956133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 3 - 170
Target Start/End: Complemental strand, 15060325 - 15060157
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  15060325 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 15060226  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
        |||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  15060225 atttttacagggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaacccttaaaa 15060157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 6 - 165
Target Start/End: Complemental strand, 41064303 - 41064143
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||               
T  41064303 gccatgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaat 41064204  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  41064203 tttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 41064143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 11957547 - 11957707
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||| ||||||||||||||||||||||               
T  11957547 gccatgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcgtcattttacaaggacggaatctaaaaaaaaaat 11957646  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
     |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  11957647 tttacagggggcaaaaccaaaagtgccctatattacaggggggtaaagacctattaaccct 11957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 41065552 - 41065719
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| | ||| ||||| ||||||||||||||||  ||||| ||||||||||| |||||||||||||||||||||||| |||||||            
T  41065552 aaagccatgtaggcgccacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggaaggaatctaaaaaaaa 41065651  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
        ||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41065652 aattttacaggggccaaaaccaaaagtgccctatattacaggggggtaaagacctattaacccttaaa 41065719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 16 - 164
Target Start/End: Original strand, 21776815 - 21776964
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  ||||||||||||||||| ||||||||||||||||||||||||||||||||            |||||||||    
T  21776815 tgccacatcatagattctgctgagtcacagggcttagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacagggg 21776914  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||||||| |||||||| ||||||||||||    
T  21776915 gcaaaaccaaaagtgccctatattacagaggggtaaagacctattaaccc 21776964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 12 - 164
Target Start/End: Original strand, 10012712 - 10012863
Alignment:
Q  12 taagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacag 111  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||           ||| ||    
T  10012712 taagtgccacatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacgaaatctaaaaaaaaatattatag 10012811  T
Q  112 ggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||| ||||||||||||| |||||||||||| | || |||| ||||||||||||    
T  10012812 gggacaaaaccaaaagtaccctatattaca-gaggataaagacctattaaccc 10012863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 6 - 165
Target Start/End: Original strand, 15061722 - 15061881
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnn 104  Q
    |||||||| ||||| ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||               
T  15061722 gccatgtaggtgccacatcatagattctgctgagtcatagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttatttt 15061821  T
Q  105 nttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
     |||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  15061822 tttacagggggcaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccct 15061881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 22 - 166
Target Start/End: Original strand, 15616414 - 15616559
Alignment:
Q  22 atcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaaa 120  Q
    |||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            |||||||||||||||    
T  15616414 atcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaatttttttttttacagggggcaaaa 15616513  T
Q  121 ccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||    
T  15616514 ccaaaagtgtcctatattacaggggggtaaagacctattaaccctt 15616559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 94
Target Start/End: Complemental strand, 29520296 - 29520205
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  29520296 aaagccatgtaggtgccacatcatagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaagacggaatct 29520205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 29521325 - 29521416
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||| |||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  29521325 aaagccatgtaggtgccacatcaaagattctgctgagtcattgggcttaggaggcaatcgtgaagaatcttcattttacaaggacggaatct 29521416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 166
Target Start/End: Original strand, 8367894 - 8368056
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    |||||||| || ||||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||| |            
T  8367894 aaagccatctaggtgccacatcaaagattctgctgcgtcaatgagcttagggggcaatcgtgaagaatcttcattttacaaggacggaatttaaaaaaaa 8367993  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
       ||||| |  |||||||||||||||| ||||| |||| | ||||||| ||||||||||||||    
T  8367994 aaattacaagaagcaaaaccaaaagtgctctatactaca-gagggtaaagacctattaaccctt 8368056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 30798474 - 30798636
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||| | ||||| ||||||||||||||||  ||||| ||||||||||| ||||||||||||||||||||||||||||||||            
T  30798474 aaagccatgtaggtgtcacatcatagattctgctgagtcacagggctcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaa 30798573  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
        ||||||||||||||| ||| |||||||||||||| ||||||||||| |||||||||||||    
T  30798574 aaaattacagggggcaaaatcaatagtgccctatatta-aggggggtaaagacctattaaccct 30798636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 174
Target Start/End: Complemental strand, 15615264 - 15615093
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||   |||| ||||||||||| ||||||||||||| ||||||||||||||||||            
T  15615264 aaagccatgtaggtgccacatcatagattctgctgagtcacatggctcagggggcaatcttgaagaatcttcaatttacaaggacggaatctaaaaaaaa 15615165  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaagaaa 174  Q
        |||| |||| |||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||||    
T  15615164 aattttaccggggacaaaaccaaaagtgccctatattaca-gggggtaaagacctattaaccctagaaagaaa 15615093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 3 - 94
Target Start/End: Original strand, 40434302 - 40434392
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||  |||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  40434302 aaagccacttaagtgccacatcaaagattctgctgagtcaatgggcttagggggcaattgtgaagaat-ttcattttacaaggacggaatct 40434392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 11439695 - 11439855
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||| ||||||||| | ||| |||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||| |            
T  11439695 aaagccacgtaagtgccacctcagagattctgctgagtcaatgggcttagtgggcaattgtgaagaatcttcattttacaaggacggaatttaatttttt 11439794  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
       ||| ||||| ||||||||||||||| |||||||||| || | |||| |||||||||||||    
T  11439795 tttttatagggg-caaaaccaaaagtgctctatattaca-ggagataaagacctattaaccct 11439855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 140
Target Start/End: Complemental strand, 21775623 - 21775485
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||||||| ||||| ||||| ||||||||||||||||  ||| | ||||||||||| ||||||||||||||||||||||||||||||||            
T  21775623 aaagccatgtaggtgccacatcatagattctgctgagtcatagggttcagggggcaatcttgaagaatcttcattttacaaggacggaatctaaaatttt 21775524  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattac 140  Q
        ||||| |||||||||||||||||||||||||||||    
T  21775523 ttttttacaaggggcaaaaccaaaagtgccctatattac 21775485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 40434619 - 40434546
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  40434619 catcagagattctgctgagtcaatgggcttaggggacaatcgtgaagaatcttcattttacaaggatggaatct 40434546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 16 - 164
Target Start/End: Complemental strand, 30796727 - 30796579
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggg 114  Q
    |||| ||||| ||||||||||||||||  ||||| |||| |||||| ||||||||||||||||||||||||||||||||            ||||| |||    
T  30796727 tgccacatcatagattctgctgagtcacagggctcagggtgcaatcttgaagaatcttcattttacaaggacggaatctaaaaaaaaaaatttacaaggg 30796628  T
Q  115 gcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  30796627 gcaaaaccaaaagtgccctatattata-gggggtaaagacctattaaccc 30796579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 11977763 - 11977642
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| ||||||||| |||||||||||||||||||| ||||||||          |||||||||||| | ||||||||||||||||||||||||     
T  11977763 ttaaaagaaagagagatgttgttttaccaaattatcctaatcaactattggtttgttgttcattaaagaaaaaataatactttggaagtagtgtatataa 11977664  T
Q  264 tattaattgaagggtgcaattg 285  Q
    |||||||| |||| | ||||||    
T  11977663 tattaattaaaggatacaattg 11977642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 34534534 - 34534413
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||||||          |||||||||||| | |||| ||||||||||||||  ||||    
T  34534534 ttaaaagaaagagagatattattttaccaaattatcctaatcaactattggtttgtttttcattaaagaaaaaataatattttggaagtagtgtgcatag 34534435  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||||||| ||||||    
T  34534434 tattaattgaagggtacaattg 34534413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 19600024 - 19599964
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||    
T  19600024 agggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacccttaaaa 19599964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 11 - 86
Target Start/End: Complemental strand, 42004065 - 42003990
Alignment:
Q  11 gtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagga 86  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||   | ||||||||| ||||||||||||    
T  42004065 gtaagtgtcacatcaaagattctgctgagtcaatgggcttagggggcaaatctaaagaatctttattttacaagga 42003990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 37274883 - 37274765
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    ||||||||||||||||  ||  ||||||||||||| ||||||||||| |||||||||||||||||||            |||||||||||||||||||||    
T  37274883 agattctgctgagtcataggagttagggggcaatcctgaagaatctttattttacaaggacggaatc-aaaaaaaaaaattacagggggcaaaaccaaaa 37274785  T
Q  127 gtgccctatattacaggggg 146  Q
    || |||||||||| ||||||    
T  37274784 gtaccctatattataggggg 37274765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 275
Target Start/End: Original strand, 15166992 - 15167100
Alignment:
Q  168 aaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatagtat 266  Q
    ||||||||||||| |||||||||||||||||||||| | ||||||||          |||||||||||| | |||| ||||||||||||||||||||||     
T  15166992 aaagaaatagagacgttattttaccaaattatcctagtcaactattggttaatttttcattaaagaaaaaataatattttggaagtagtgtatatagtaa 15167091  T
Q  267 taattgaag 275  Q
    |||||||||    
T  15167092 taattgaag 15167100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 278
Target Start/End: Complemental strand, 36165047 - 36164948
Alignment:
Q  180 atgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggt 278  Q
    |||||||||||||||||||||||||| |||||||||          ||||||||||| | |||| |||||||||| ||||||||||||||||||||||||    
T  36165047 atgttattttaccaaattatcctaatcaactattgatttgttttttattaaagaaaaaataatattttggaagtaatgtatatagtattaattgaagggt 36164948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 224 - 274
Target Start/End: Original strand, 14161938 - 14161988
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||    
T  14161938 cattaaagaaaaaataatactttggaagtagtgtatatagtattaattgaa 14161988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 106 - 164
Target Start/End: Complemental strand, 35599370 - 35599312
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||||||||||||||||| |||||||||||||||||||||   ||||||||||    
T  35599370 ttacagggggcaaaaccaaaagtgacctatattacaggggggtaaaggtctattaaccc 35599312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 167
Target Start/End: Original strand, 19601266 - 19601327
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctta 167  Q
    |||||||  ||||||||||||||| |||||||||||||||||||||  ||||||||||||||    
T  19601266 ttacaggatgcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaaccctta 19601327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 35600538 - 35600595
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    ||||| |||||||||||||||||| |||||||||||||||||||||  ||||||||||    
T  35600538 ttacaaggggcaaaaccaaaagtgacctatattacaggggggtaaaggcctattaacc 35600595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 9751676 - 9751735
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||  |||||||||||||    
T  9751676 ttacagggggcaaaaccaaaagtgacctatattaca-gggggtaaaagcctattaaccctt 9751735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 9750505 - 9750446
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||||  ||||||||||||    
T  9750505 ttacaggggacaaaaccaaaagtgacctatattacaagggggtaaaggcctattaaccct 9750446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 146
Target Start/End: Complemental strand, 11438476 - 11438356
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaaaccaaa 125  Q
    ||||||||||||||||  ||| | ||||| ||||| ||||||||||| |||||||| |||||||||||            |||||||| |||||||||||    
T  11438476 agattctgctgagtcataggggtcaggggacaatcctgaagaatctttattttacatggacggaatctaaaaaaaaaaatttacagggagcaaaaccaaa 11438377  T
Q  126 agtgccctatattacaggggg 146  Q
    ||| |||||||||||||||||    
T  11438376 agtaccctatattacaggggg 11438356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Complemental strand, 4425090 - 4425028
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  4425090 cattaaagaaaaaataatactttggaagtagtgtaatatagtattaattgaaaggtacaattg 4425028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 6055176 - 6055234
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||| || ||||||||||||| |||||||||||||||||||||  |||||||||||    
T  6055176 ttacaggagggaaaaccaaaagtgtcctatattacaggggggtaaaatcctattaaccc 6055234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 34446064 - 34446126
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  34446064 cattaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 34446126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 285
Target Start/End: Complemental strand, 843193 - 843072
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||  ||| |||||||||||||||||||||||||| ||||||| |         |||||||||||| | || ||||| ||||||||||||| |     
T  843193 ttaaaagaaggagatatgttattttaccaaattatcctaatcaactattggtttgtttctcattaaagaaaaaataacacttttgaagtagtgtatacaa 843094  T
Q  264 tattaattgaagggtgcaattg 285  Q
    ||||||||||| ||| ||||||    
T  843093 tattaattgaatggtacaattg 843072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 143
Target Start/End: Original strand, 13948582 - 13948619
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagg 143  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13948582 ttacagggggcaaaaccaaaagtgccctatattacagg 13948619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 28819593 - 28819537
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||||||||||||||||| |||||||||||| ||||||||  ||||||||||    
T  28819593 ttacagggggcaaaaccaaaagtgacctatattacag-ggggtaaaggcctattaacc 28819537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 94
Target Start/End: Complemental strand, 33751049 - 33750988
Alignment:
Q  33 tgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||  ||| | ||||||||||| ||||||||||| ||||||||||||||||||||    
T  33751049 tgctgagtcatagggatcagggggcaatcctgaagaatctttattttacaaggacggaatct 33750988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 38362115 - 38362164
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| ||| |||||||||||| ||||||||||||||||||||||    
T  38362115 ttaaaagaaagagaaatgttattttactaaattatcctaattaactattg 38362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 225 - 285
Target Start/End: Original strand, 42661978 - 42662039
Alignment:
Q  225 attaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    ||||||||||| | ||||||||||||||||||| | ||||||||||||||||||| ||||||    
T  42661978 attaaagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 42662039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 53 - 163
Target Start/End: Complemental strand, 10011725 - 10011619
Alignment:
Q  53 ggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaat 152  Q
    ||||||||||||||||||||| |||||| |||||||||||||           ||| |||||||||||||||||||| |||||||||||  ||| ||||     
T  10011725 ggggcaatcgtgaagaatctttattttataaggacggaatct---atttttttttagagggggcaaaaccaaaagtgtcctatattaca-cgggataaag 10011630  T
Q  153 acctattaacc 163  Q
    |||||||||||    
T  10011629 acctattaacc 10011619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 13974449 - 13974401
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt 213  Q
    |||||||||| |||| ||||||||||||||||||||||||| |||||||    
T  13974449 ttaaaagaaagagaggtgttattttaccaaattatcctaatcaactatt 13974401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 284
Target Start/End: Complemental strand, 38370047 - 38369927
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaacta-ttgannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||| ||| ||| |||||||||||||||||||||||||| ||||| |||         ||||||  |||| | ||||||||| ||||||||||||||     
T  38370047 ttaaaataaagagatatgttattttaccaaattatcctaatcaactatttgttcgtttttcattaataaaaaaataatactttgaaagtagtgtatataa 38369948  T
Q  264 tattaattgaagggtgcaatt 284  Q
    |||||||||||| || |||||    
T  38369947 tattaattgaagagtacaatt 38369927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 711294 - 711236
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||||| || || ||||||||||||||||||||| |||||||||||||    
T  711294 ttacaggggg-aaaaccataaatgacctatattacaggggggtaaagacctattaaccct 711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 117 - 168
Target Start/End: Complemental strand, 5699802 - 5699751
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaa 168  Q
    ||||||||||||| |||||||| ||||||||||||  |||||||||||||||    
T  5699802 aaaaccaaaagtgacctatattgcaggggggtaaaagcctattaacccttaa 5699751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 145
Target Start/End: Original strand, 11890099 - 11890138
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacagggg 145  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  11890099 ttacagggggcaaaaccaaaagtgacctatattacagggg 11890138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 28820555 - 28820618
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattaca-ggggggtaaatacctattaacccttaa 168  Q
    ||||||||||||||| |||||||| ||||||||||| |||||||||   |||||||||||||||    
T  28820555 ttacagggggcaaaatcaaaagtgacctatattacagggggggtaagagcctattaacccttaa 28820618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 40434123 - 40434057
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| |||| | |||  |||||||||| ||||||||||| ||||||||||||||||||||    
T  40434123 agattctgctgactcaaagagctc-gggggcaatcctgaagaatctttattttacaaggacggaatct 40434057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 185 - 278
Target Start/End: Original strand, 42104060 - 42104155
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggt 278  Q
    ||||||||||||||||||||| |||||||||         |||||||||||| | ||||| ||||||||||||| | |||||||||||||||||||    
T  42104060 attttaccaaattatcctaatcaactattgacttgtttttcattaaagaaaaaataataccttggaagtagtgtaacatagtattaattgaagggt 42104155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 165 - 274
Target Start/End: Original strand, 1309336 - 1309446
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga-nnnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||||||| ||||||||||| ||||||||| |||| ||| |||||         |||||||||||| | ||||  ||| ||||||||||||||     
T  1309336 ttaaaagaaatagatatgttattttatcaaattatcataatcaacaattgatttgtttatcattaaagaaaaaataatatgttgtaagtagtgtatataa 1309435  T
Q  264 tattaattgaa 274  Q
    |||||||||||    
T  1309436 tattaattgaa 1309446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 2729823 - 2729885
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | ||||| ||||||||||||| ||||||    
T  2729823 cattaaagaaaaaataatactttggaagtagtgtaacatagttttaattgaagggtacaattg 2729885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 3306046 - 3306108
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||||||| | | ||||||||||||||||| ||||||    
T  3306046 cattaaagaaaaaataatactttggaagtagtgtaacagagtattaattgaagggtacaattg 3306108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 185 - 285
Target Start/End: Complemental strand, 39566339 - 39566237
Alignment:
Q  185 attttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaa 282  Q
    ||||||||||||||||||||| |||||||||         ||||||||| || | ||||||||||||||||||| | ||| ||||||||||||||| |||    
T  39566339 attttaccaaattatcctaatcaactattgatttgtttttcattaaagagaaaataatactttggaagtagtgtaacatattattaattgaagggtacaa 39566240  T
Q  283 ttg 285  Q
    |||    
T  39566239 ttg 39566237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 9227084 - 9227141
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||| ||||||| || || ||||||||||||||| ||||| |||||||||||    
T  9227084 ttacaggggggaaaaccagaaatgacctatattacaggggtgtaaagacctattaacc 9227141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 9673129 - 9673174
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  9673129 ttacaggggggaaaaccaaaaatgacctatattacaggggggtaaa 9673174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 229 - 285
Target Start/End: Complemental strand, 13761668 - 13761611
Alignment:
Q  229 aagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    ||||||| | ||||||||||||||||||||  ||||||||||||||||||| ||||||    
T  13761668 aagaaaaaataatactttggaagtagtgtaacatagtattaattgaagggtacaattg 13761611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 248 - 285
Target Start/End: Complemental strand, 21195470 - 21195433
Alignment:
Q  248 gaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||||||||||||||||||||||||| ||||||    
T  21195470 gaagtagtgtatatagtattaattgaagggtacaattg 21195433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 33658928 - 33658871
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| |||||||||||    
T  33658928 ttacaggggggaaaaccggaaatgacctatattacaggggggtaaagacctattaacc 33658871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 711458 - 711518
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||| ||||| |||||  ||| || ||||||||||||||||||||| ||||||||||||||    
T  711458 ttactgggggaaaaactgaaaatgacctatattacaggggggtaaagacctattaaccctt 711518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 176 - 208
Target Start/End: Original strand, 28591611 - 28591643
Alignment:
Q  176 agagatgttattttaccaaattatcctaattaa 208  Q
    |||||||||||||||||||||||||||||||||    
T  28591611 agagatgttattttaccaaattatcctaattaa 28591643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 29321307 - 29321366
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||| ||||||||||| || ||||||||||| | || |||| |||||||||||||    
T  29321307 ttacaggggacaaaaccaaaaatgacctatattacatgaggataaagacctattaaccct 29321366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Original strand, 33659106 - 33659164
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||||  || || ||||||||||| |||||||||||||||||||||||    
T  33659106 ttacaggggg-aaaaccggaaatgacctatattacaagggggtaaatacctattaaccct 33659164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 51 - 94
Target Start/End: Complemental strand, 33847224 - 33847181
Alignment:
Q  51 agggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||| ||||||||||| ||||||||||||| ||||||    
T  33847224 agggggcaatcctgaagaatctttattttacaaggacagaatct 33847181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 131 - 166
Target Start/End: Complemental strand, 39153449 - 39153414
Alignment:
Q  131 cctatattacaggggggtaaatacctattaaccctt 166  Q
    ||||||||||||||||||||| ||||||||||||||    
T  39153449 cctatattacaggggggtaaagacctattaaccctt 39153414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 7317193 - 7317143
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattga 215  Q
    |||||||||| |||   ||||||||||||||||||||| ||||||||||||    
T  7317193 ttaaaagaaagagaatggttattttaccaaattatccttattaactattga 7317143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 165 - 262
Target Start/End: Complemental strand, 7736549 - 7736451
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatata 262  Q
    |||||| ||| ||| |||||||||||||| ||||||||||| ||||||| |         |||||||||||| | ||||||||| ||||||||||||||    
T  7736549 ttaaaataaagagatatgttattttaccatattatcctaatcaactattagttcgtttttcattaaagaaaaaataatactttgaaagtagtgtatata 7736451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 21634226 - 21634177
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    |||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  21634226 cattaaagaaaa-ataatattttggaagtagtgtatataatattaattgaa 21634177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 274
Target Start/End: Complemental strand, 21642473 - 21642424
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    |||||||||||| | |||| ||||||||||||||||||| |||||||||||    
T  21642473 cattaaagaaaa-ataatattttggaagtagtgtatataatattaattgaa 21642424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 22756382 - 22756440
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||||||| |||||| ||| || |||||||||||||||||||||   ||||||||||    
T  22756382 ttacagggggtaaaaccgaaaatgacctatattacaggggggtaaaacactattaaccc 22756440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 39418951 - 39419009
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccc 164  Q
    |||||| ||| ||||||  || || ||||||||||||||||||||| ||||||||||||    
T  39418951 ttacagaggggaaaaccggaaatgacctatattacaggggggtaaagacctattaaccc 39419009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 251 - 285
Target Start/End: Complemental strand, 41645328 - 41645294
Alignment:
Q  251 gtagtgtatatagtattaattgaagggtgcaattg 285  Q
    |||||||||||||||||||||||||||| ||||||    
T  41645328 gtagtgtatatagtattaattgaagggtacaattg 41645294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 276
Target Start/End: Complemental strand, 14006008 - 14005955
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagg 276  Q
    |||||||||||| | ||||| ||||||||||||| | |||||||||||||||||    
T  14006008 cattaaagaaaaaataataccttggaagtagtgtaacatagtattaattgaagg 14005955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 16504946 - 16504999
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctatt 159  Q
    |||||| ||| |||||| ||| || ||||||||||||||||||||| |||||||    
T  16504946 ttacagtggggaaaaccgaaaatgacctatattacaggggggtaaagacctatt 16504999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 18229796 - 18229747
Alignment:
Q  117 aaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||| ||| || ||||||||||||||| ||||| ||||||||||||||    
T  18229796 aaaaccgaaaatgacctatattacaggggtgtaaagacctattaaccctt 18229747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 139
Target Start/End: Original strand, 26888457 - 26888490
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatatta 139  Q
    |||||||||||||||||||||||| |||||||||    
T  26888457 ttacagggggcaaaaccaaaagtgacctatatta 26888490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 33053071 - 33053104
Alignment:
Q  131 cctatattacaggggggtaaatacctattaaccc 164  Q
    ||||||||||||||||||||| ||||||||||||    
T  33053071 cctatattacaggggggtaaagacctattaaccc 33053104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 214
Target Start/End: Original strand, 35765888 - 35765937
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactattg 214  Q
    |||||||||| |||   ||||||||||||||||||||| |||||||||||    
T  35765888 ttaaaagaaagagaatggttattttaccaaattatccttattaactattg 35765937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 12496592 - 12496528
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||| |||| || |||||| ||||||||||||||   | ||||||||||||||    
T  12496592 ttacaggggggaaaacaaaaaatgacctatactacaggggggtaaagcaccattaacccttaaaa 12496528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 15395599 - 15395543
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||||||||||  |||||||||||| ||||| ||||| ||||||||| |||||||||||||    
T  15395599 ttacaggggg--aaaccaaaagtgacctattttaca-gggggtaaaaacctattaaccct 15395543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 142
Target Start/End: Original strand, 25453873 - 25453909
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacag 142  Q
    |||||||||||||||||||||||| | ||||||||||    
T  25453873 ttacagggggcaaaaccaaaagtgacatatattacag 25453909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 26034902 - 26034843
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| |||||||||| || |||||||| ||| ||| |||| ||||||||||||||    
T  26034902 ttacagggggaaaaaccaaaaatgacctatattgcagaggg-taaagacctattaaccctt 26034843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 29754106 - 29754042
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||  || || ||||||||| ||||||||||| | ||||||||||| ||||    
T  29754106 ttacaggggggaaaaccggaaatgacctatattataggggggtaaagatctattaaccctaaaaa 29754042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 38482375 - 38482316
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||| | ||||||| || || |||||||||||| |||||||| ||||||||||||||    
T  38482375 ttacagggaggaaaaccagaattgacctatattacag-ggggtaaagacctattaaccctt 38482316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 242 - 285
Target Start/End: Original strand, 39335259 - 39335303
Alignment:
Q  242 actttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||||||||  ||||||||||||||||||| ||||||    
T  39335259 actttggaagtagtgtaacatagtattaattgaagggtacaattg 39335303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228 (Bit Score: 83; Significance: 3e-39; HSPs: 3)
Name: scaffold0228
Description:

Target: scaffold0228; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 8241 - 8076
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnnnnn 103  Q
    |||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||               
T  8241 gccacgtaagtgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaattttttta 8142  T
Q  104 nnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
      ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  8141 ttttaca-ggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaaaaa 8076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 15823 - 15658
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnnnnn 103  Q
    |||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||               
T  15823 gccacgtaagtgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaattttttta 15724  T
Q  104 nnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
      ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  15723 ttttaca-ggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaaaaa 15658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0228; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 6 - 170
Target Start/End: Complemental strand, 25775 - 25610
Alignment:
Q  6 gccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnnnnn 103  Q
    |||| ||||||||| | ||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||               
T  25775 gccacgtaagtgccacctcagagattctgctgagtcaatgggcttagggggcaatcgtgaaaaatcttcattttacaaggacggaatcttaattttttta 25676  T
Q  104 nnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
      ||||| |||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||    
T  25675 ttttaca-ggggcaaaaccaaaagtgtcctatattacaggggggtaaagacctattaaccctaaaaa 25610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 77; Significance: 1e-35; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 16 - 170
Target Start/End: Original strand, 195 - 351
Alignment:
Q  16 tgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct--nnnnnnnnnnnttacaggg 113  Q
    |||| ||||| ||||||||||||||||| ||||| ||||||||||| |||||||||||||||||| |||||||||||||             ||||||||    
T  195 tgccacatcatagattctgctgagtcaaagggctcagggggcaatcttgaagaatcttcattttataaggacggaatctaaaaaaaaactttttacaggg 294  T
Q  114 ggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||| ||||    
T  295 ggcaaaaccaaaagtgccctatattacatgggggtaaagacctattaaccctaaaaa 351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0250
Description:

Target: scaffold0250; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 10241 - 10078
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnn 101  Q
    ||||||| ||||||||| | ||| ||||| ||||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||            
T  10241 aaagccacgtaagtgccacctcagagattttgctgagtcaatgggattagggggcaattgtgaagaatcttcattttacaaggactgaatctaatttttt 10142  T
Q  102 nnnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
        |||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||||||    
T  10141 ttttttacagggggcaaaactaaaagtgccctatattaca-gggggtaaagacctattaaccctt 10078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0250; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 165
Target Start/End: Original strand, 11488 - 11627
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct-nnnnnnnnnnnttacagggggcaaaaccaaa 125  Q
    ||||||||||||||||  ||| | ||||||||||| ||||||||||| ||||||||||||||||||||            ||||||||||||||||||||    
T  11488 agattctgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaatctaaaaaaaaaaatttacagggggcaaaaccaaa 11587  T
Q  126 agtgccctatattacaggggggtaaatacctattaaccct 165  Q
    ||| |  |||||||||||||||||||   |||||||||||    
T  11588 agtactatatattacaggggggtaaagctctattaaccct 11627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 62; Significance: 9e-27; HSPs: 2)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 3 - 92
Target Start/End: Complemental strand, 16036 - 15947
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 92  Q
    ||||||||||| ||||| ||||| ||||| || ||||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  16036 aaagccatgtaggtgccacatcatagattttgttgagtcaatgggcttagggggcaatctcgaagaatcttcattttacaaggacggaat 15947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 92
Target Start/End: Original strand, 17381 - 17440
Alignment:
Q  33 tgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 92  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17381 tgctgagtcattgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaat 17440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0804 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0804
Description:

Target: scaffold0804; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 8 - 166
Target Start/End: Complemental strand, 2890 - 2731
Alignment:
Q  8 catgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaagg-acggaatctnnnnnnnnnnnt 106  Q
    |||||| |||||  |||| ||||||||||||||||  ||||| ||||||||||| |||||||| ||||||| |||||| |||||||||           |    
T  2890 catgtaggtgccatatcatagattctgctgagtcacggggctcagggggcaatcttgaagaattttcattt-acaagggacggaatctaaaaaaaaaaat 2792  T
Q  107 t-acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    | ||||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  2791 ttacaggaggcaaaaccaaaagtgccctatattacaggggagtaaagacctattaaccctt 2731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 94
Target Start/End: Complemental strand, 20983 - 20910
Alignment:
Q  21 catcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||| | |||||||||||||||||||||||||    
T  20983 catcagagattctgctgagtcaatagacttagggggcaatcgtgaaaattcttcattttacaaggacggaatct 20910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 106 - 173
Target Start/End: Original strand, 4956 - 5024
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattaca-ggggggtaaatacctattaacccttaaaagaa 173  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| || ||||||||||||||||||    
T  4956 ttacagggggcaaaaccaaaagtgacctatattacagggggggtaaagacttattaacccttaaaagaa 5024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 3971 - 3912
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||||||||||||||||| |||| ||||||| |||||||| ||||||||||||||    
T  3971 ttacagggggcaaaaccaaaagtgtcctacattacag-ggggtaaagacctattaaccctt 3912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 163
Target Start/End: Complemental strand, 23836 - 23685
Alignment:
Q  3 aaagccatgtaagtgcctcatcaaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnn 102  Q
    ||||||| ||||||||| | ||| ||||||||||||||||||||||         ||| ||||||||||||||||||| |||||| ||||||            
T  23836 aaagccacgtaagtgccacctcagagattctgctgagtcaatgggc---------aattgtgaagaatcttcattttataaggacagaatctaaattttt 23746  T
Q  103 nnnttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacc 163  Q
       ||||||||||||||| |||||||| | ||||||||| ||||||||| |||||||||||    
T  23745 tttttacagggggcaaaatcaaaagtgtcttatattacatgggggtaaagacctattaacc 23685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 27 - 164
Target Start/End: Original strand, 24857 - 24995
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnntt-acagggggcaaaaccaaa 125  Q
    ||||| ||||||||||  ||| | ||||||||||| ||||||||||| |||||||||||||||||| |           || | ||||||||||| ||||    
T  24857 agattttgctgagtcataggggtcagggggcaatcctgaagaatctttattttacaaggacggaatgtgaaaaaaaatatttatagggggcaaaatcaaa 24956  T
Q  126 agtgccctatattacaggggggtaaatacctattaaccc 164  Q
    ||| |||||||||||| |||||||||   ||||||||||    
T  24957 agtaccctatattacaagggggtaaagctctattaaccc 24995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 284
Target Start/End: Original strand, 552 - 669
Alignment:
Q  168 aaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatagtat 266  Q
    ||||||| |||||| |||||||||||||||||| |||| |||||||||         |||||||  ||| | |||||||||||||||||||||||| |||    
T  552 aaagaaagagagatattattttaccaaattatcataatcaactattgatttctttttcattaaaacaaaaataatactttggaagtagtgtatataatat 651  T
Q  267 taattgaagggtgcaatt 284  Q
    |||||||||||| |||||    
T  652 taattgaagggtacaatt 669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 167 - 285
Target Start/End: Complemental strand, 4314 - 4195
Alignment:
Q  167 aaaagaaatagagatgttattttaccaaattatcctaattaactattgannnnnnnnc-attaaagaaaacacaatactttggaagtagtgtatatagta 265  Q
    |||||||||| |||| |||||||||||||||||||| || ||||||| |          ||||||| ||| |||||||||| ||||||||||||||| ||    
T  4314 aaaagaaatatagatattattttaccaaattatccttatcaactattaatttgttttttattaaaggaaaaacaatactttagaagtagtgtatataata 4215  T
Q  266 ttaattgaagggtgcaattg 285  Q
    ||||||||||||| ||||||    
T  4214 ttaattgaagggtacaattg 4195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 110 - 165
Target Start/End: Complemental strand, 227423 - 227368
Alignment:
Q  110 agggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||    
T  227423 agggggcaaaaccaaaagtgacctatattacagggaggtaaagacctattaaccct 227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 228586 - 228645
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattaca-ggggggtaaatacctattaaccc 164  Q
    |||||||||||||||| ||||||| ||||||||||| |||||||||| ||||||||||||    
T  228586 ttacagggggcaaaactaaaagtgacctatattacacggggggtaaagacctattaaccc 228645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 285
Target Start/End: Original strand, 675 - 785
Alignment:
Q  176 agagatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaa 274  Q
    ||||||||||||||||||||||||| |||| |||||||||         |||||||||||| ||||  |||||||| ||||||||||| |||||||| ||    
T  675 agagatgttattttaccaaattatcttaatcaactattgatatgtttttcattaaagaaaaaacaagtctttggaattagtgtatataatattaattaaa 774  T
Q  275 gggtgcaattg 285  Q
    |||| ||||||    
T  775 gggtacaattg 785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 49 - 164
Target Start/End: Original strand, 37333 - 37447
Alignment:
Q  49 ttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaagtgccctatattacaggggggt 148  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||           |||||||||||||||||||||||  ||||||| ||||||| ||    
T  37333 ttagggggcaatcctgaagaatctttattttacaaggacggaatct-aataaaaaaattacagggggcaaaaccaaaagtatcctatatgacaggggtgt 37431  T
Q  149 aaatacctattaaccc 164  Q
    |||   ||||||||||    
T  37432 aaaactctattaaccc 37447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 110467 - 110407
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||| ||||||||||||||| | |||||||||||||| ||||| |||||||||||||    
T  110467 ttacagggagcaaaaccaaaagtgacatatattacagggggataaatgcctattaaccctt 110407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 25 - 88
Target Start/End: Complemental strand, 36201 - 36138
Alignment:
Q  25 aaagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacg 88  Q
    ||||||||||||||||||  ||| ||||||||||||| |||| |||||| ||||||||||||||    
T  36201 aaagattctgctgagtcataggggttagggggcaatcctgaaaaatctttattttacaaggacg 36138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 3)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 8967 - 9034
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||| ||||||||||  ||| ||||| ||||||| ||||||||||| ||||||||||||||||||||    
T  8967 agattttgctgagtcataggggttaggaggcaatcctgaagaatctttattttacaaggacggaatct 9034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 2797 - 2741
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaa 83  Q
    ||||||||||||||||  ||| ||||||||||||| |||| |||||| |||||||||    
T  2797 agattctgctgagtcatagggattagggggcaatcctgaataatctttattttacaa 2741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 27 - 83
Target Start/End: Complemental strand, 7420 - 7364
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaa 83  Q
    ||||||||||||||||  ||| ||||||||||||| |||| |||||| |||||||||    
T  7420 agattctgctgagtcatagggattagggggcaatcctgaataatctttattttacaa 7364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 285
Target Start/End: Original strand, 9932 - 10053
Alignment:
Q  165 ttaaaagaaatagagatgttattttaccaaattatcctaattaactatt-gannnnnnnncattaaagaaaacacaatactttggaagtagtgtatatag 263  Q
    |||||||||| | ||||||||||||||||||||||| |||| ||||||| |         | |||||||||| | |||| ||| |||||| |||||||||    
T  9932 ttaaaagaaaaaaagatgttattttaccaaattatcttaatcaactattagtttgtttttccttaaagaaaaaataatatttttgaagtattgtatatag 10031  T
Q  264 tattaattgaagggtgcaattg 285  Q
    || |||||||||||| ||||||    
T  10032 tactaattgaagggtacaattg 10053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 9679 - 9740
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtat-atagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||| |||||||||||||||  ||||||||||||||||||| ||||||    
T  9679 cattaaagaaaaaataata-tttggaagtagtgtaacatagtattaattgaagggtacaattg 9740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 2059 - 2119
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||  ||||||| || || ||||||||||||||||||||| ||||||||||||||    
T  2059 ttacaggggtgaaaaccagaaatgacctatattacaggggggtaaagacctattaaccctt 2119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1571 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1571
Description:

Target: scaffold1571; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 183 - 116
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  183 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatct 116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1147 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold1147
Description:

Target: scaffold1147; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 27 - 94
Target Start/End: Complemental strand, 2598 - 2531
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||||||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  2598 agattctgctgagtcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatct 2531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 36; Significance: 0.00000000003; HSPs: 3)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 35656 - 35598
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||||||||||||||||| ||||||||  | ||||||||| |||||||||||||    
T  35656 ttacagggggcaaaaccaaaagtgacctatatttta-gggggtaaagacctattaaccct 35598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 178 - 283
Target Start/End: Complemental strand, 9707 - 9600
Alignment:
Q  178 agatgttattttaccaaattatcctaattaactattgannnnnnnn-cattaaagaaaacac-aatactttggaagtagtgtatatagtattaattgaag 275  Q
    |||||||||||||| ||||||||||||| ||||||||          |||||||||||| |  |||| |||| ||||||| |||||||||||||||||||    
T  9707 agatgttattttactaaattatcctaatcaactattggtttgtttttcattaaagaaaaaaataataatttgaaagtagtatatatagtattaattgaag 9608  T
Q  276 ggtgcaat 283  Q
    ||| ||||    
T  9607 ggtacaat 9600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 636 - 699
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaaa 170  Q
    |||||||||| ||||||| || || ||||||||||| | ||||||| ||||||||||||| ||||    
T  636 ttacaggggggaaaaccataaatgacctatattaca-gagggtaaagacctattaaccctaaaaa 699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 3541 - 3603
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | |||||||| |||||||||| | ||||||||||||||||||| ||||||    
T  3541 cattaaagaaaaaataatactttagaagtagtgtaacatagtattaattgaagggtacaattg 3603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 24777 - 24839
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgt-atatagtattaattgaagggtgcaattg 285  Q
    |||||||||||| | ||||||||||||||| ||| | ||||||||||||||||||| ||||||    
T  24777 cattaaagaaaagataatactttggaagtattgtaacatagtattaattgaagggtacaattg 24839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0497 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 27 - 145
Target Start/End: Original strand, 1469 - 1587
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatctnnnnnnnnnnnttacagggggcaaaaccaaaa 126  Q
    |||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||           |||||||||  ||||||||||    
T  1469 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatctaaaaaaaaaatttacaggggctaaaaccaaaa 1568  T
Q  127 gtgccctatattacagggg 145  Q
     ||| ||||||||||||||    
T  1569 ttgctctatattacagggg 1587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0850
Description:

Target: scaffold0850; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 26 - 94
Target Start/End: Complemental strand, 1590 - 1522
Alignment:
Q  26 aagattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    ||||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  1590 aagattctgctgactcattggggtgaggggtcaatcctgaagaatcttcatttttcaagggtggaatct 1522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0850; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 27 - 94
Target Start/End: Original strand, 4564 - 4631
Alignment:
Q  27 agattctgctgagtcaatgggcttagggggcaatcgtgaagaatcttcattttacaaggacggaatct 94  Q
    |||||||||||| ||| |||| | ||||| ||||| ||||||||||||||||| |||||  |||||||    
T  4564 agattctgctgactcattggggtgaggggccaatcctgaagaatcttcatttttcaagggtggaatct 4631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0300 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0300
Description:

Target: scaffold0300; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 285
Target Start/End: Complemental strand, 4727 - 4619
Alignment:
Q  178 agatgttattttaccaaattatcctaattaactattga-nnnnnnnncattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagg 276  Q
    |||||||||||||||||| ||||||||| |||||||||          ||||||| ||| | |||| ||||||||||||||||||| |||| |||||| |    
T  4727 agatgttattttaccaaactatcctaatcaactattgatttgttttttattaaagtaaatataatattttggaagtagtgtatataatattgattgaaag 4628  T
Q  277 gtgcaattg 285  Q
    || ||||||    
T  4627 gtacaattg 4619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 106 - 166
Target Start/End: Complemental strand, 6867 - 6808
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccctt 166  Q
    |||||||||| ||||||| || || |||||||||||||||| |||| ||||||||||||||    
T  6867 ttacaggggg-aaaaccataaatgacctatattacagggggataaagacctattaaccctt 6808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0769 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 106 - 165
Target Start/End: Complemental strand, 3971 - 3913
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaaccct 165  Q
    |||||||||| ||||||  || || ||||||||||||||||||||| |||||||||||||    
T  3971 ttacaggggg-aaaaccggaaatgacctatattacaggggggtaaagacctattaaccct 3913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1797 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold1797
Description:

Target: scaffold1797; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 678 - 723
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||  |||||||||| || |||||||||||||||||||||    
T  678 ttacaggggagaaaaccaaaaatgacctatattacaggggggtaaa 723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0430 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0430
Description:

Target: scaffold0430; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 12542 - 12497
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||||| |||| || |||||||||||||||||||||    
T  12542 ttacagggggaaaaacaaaaaatgacctatattacaggggggtaaa 12497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0192 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 14266 - 14221
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||| | |||||||||| || |||||||||||||||||||||    
T  14266 ttacagggaggaaaaccaaaaatgacctatattacaggggggtaaa 14221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 224 - 285
Target Start/End: Original strand, 18292 - 18353
Alignment:
Q  224 cattaaagaaaacacaatactttggaagtagtgtatatagtattaattgaagggtgcaattg 285  Q
    ||||||||| || | ||||||||| || ||||||||||| | ||||||||||||| ||||||    
T  18292 cattaaagataaaataatactttgaaaatagtgtatataatgttaattgaagggtacaattg 18353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 149619 - 149664
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| ||| |||||| || |||||||||||||||||||||    
T  149619 ttacaggggggaaatccaaaaatgacctatattacaggggggtaaa 149664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 145386 - 145341
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||| ||||| || |||||||||||||||||||||    
T  145386 ttacagggggaaaaatcaaaaatgacctatattacaggggggtaaa 145341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Complemental strand, 150043 - 149999
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || |||||||||||||||||||||    
T  150043 ttacaggggg-aaaaccaaaaatgacctatattacaggggggtaaa 149999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 151
Target Start/End: Original strand, 150225 - 150270
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa 151  Q
    |||||||||| |||||||||| || ||||||||||||||| |||||    
T  150225 ttacaggggggaaaaccaaaaatgacctatattacaggggtgtaaa 150270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 14885 - 14824
Alignment:
Q  108 acagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaacccttaaa 169  Q
    |||||||| ||||||||||||| |||||||| || | |||||||  |||||||||| |||||    
T  14885 acaggggggaaaaccaaaagtgacctatattgcaagagggtaaaggcctattaacctttaaa 14824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0933 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0933
Description:

Target: scaffold0933; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 2718 - 2758
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    ||||| |||||||| |||||||| |||||||||||||||||    
T  2718 ttacatggggcaaatccaaaagtaccctatattacaggggg 2758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0289 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Complemental strand, 9977 - 9937
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||  |||||||||||| |||||||||||||||||    
T  9977 ttacaggggtgaaaaccaaaagtaccctatattacaggggg 9937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 169
Target Start/End: Original strand, 34982 - 35044
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaa-tacctattaacccttaaa 169  Q
    |||||||||| ||||| |||| || ||||||||||||||||||||| |||| |||||||||||||    
T  34982 ttacaggggg-aaaacaaaaaatgacctatattacaggggggtaaagtacc-attaacccttaaa 35044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 162
Target Start/End: Complemental strand, 28128 - 28072
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggggtaaatacctattaac 162  Q
    |||||| ||| ||||| | || || ||||||||||||||||||||| ||||||||||    
T  28128 ttacagaggggaaaacaagaaatgacctatattacaggggggtaaaaacctattaac 28072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 106 - 146
Target Start/End: Original strand, 53522 - 53562
Alignment:
Q  106 ttacagggggcaaaaccaaaagtgccctatattacaggggg 146  Q
    |||||||||| |||||||||| || ||||||||||||||||    
T  53522 ttacaggggggaaaaccaaaaatgacctatattacaggggg 53562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University