View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13967_high_11 (Length: 236)
Name: NF13967_high_11
Description: NF13967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13967_high_11 |
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Alignment Details
Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 15 - 219
Target Start/End: Original strand, 2408804 - 2409008
Alignment:
| Q |
15 |
tatactacagtaggaacacttcaatgcactctatttaacaagaaattaacctaattatttcaaccatattcaaaattcaagtaaataactctaaacaacg |
114 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2408804 |
tataatacagtaggaacacttcaatgcactctatttaacaagaaattaacctaattatttcaaccatattcaaaattcaagtaaataactctaaacaacg |
2408903 |
T |
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| Q |
115 |
atgaagattaagaataacttagaaaacgataataagttgcatttcaatgaaaacaagtaatatatctaataatcatgaacaaatctttacctcaacaatg |
214 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
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| T |
2408904 |
atgaagattaagaataacttagaaaacgataataagttgcatttcaatgaaaacaagtaatatatctaataattatgaacaaatctttacctcaacattg |
2409003 |
T |
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| Q |
215 |
ataac |
219 |
Q |
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||||| |
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| T |
2409004 |
ataac |
2409008 |
T |
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