View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13967_high_6 (Length: 304)
Name: NF13967_high_6
Description: NF13967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13967_high_6 |
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Alignment Details
Target: chr7 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 392217 - 391934
Alignment:
| Q |
1 |
tttatttaatacaggacaaaatgaaataaaatgaaaagtagtgaaaactttcaccaagtcaaagatcaacgaaagtattgagcaacaaacaataacaacc |
100 |
Q |
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| T |
392217 |
tttatttaatacaggacaaaatgaaataaaatgaaaagtagtgaaaactttcaccaagtcaaagatcaacgaaagtattgagcaacaaacaataacaacc |
392118 |
T |
|
| Q |
101 |
aagtcttatctcacaaggtgaagtcgcttacatttcatgaatctaattgtgtcttaaagtcctactattcatcaactttaaagagaaaccatttatctat |
200 |
Q |
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|||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
392117 |
aagtcttatctcacaaggtgaagtcgcttacattacatgaatctaattgtgtcgtaaagtcctactattcatcaactttaaagataaaccatttatcta- |
392019 |
T |
|
| Q |
201 |
aaatcttgcttaatgatttgaccaacaacttttcttggtctcctgctacctttagctattaaactatactccgtccgatcaattctcttc |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
392018 |
-----ttgcttaatgatttgaccaacaacttttcttggtctcctgctacctttagctattaaactatactccatccgatcaattctcttc |
391934 |
T |
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