View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13967_high_7 (Length: 278)
Name: NF13967_high_7
Description: NF13967
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13967_high_7 |
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Alignment Details
Target: chr8 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 17 - 275
Target Start/End: Original strand, 6029744 - 6030002
Alignment:
| Q |
17 |
ataaactttacgtgatctggtgactgtgatcaaataaagatgatgtagtttgacattggattgagaattgagatctataaaggacatcaatgaggatgcc |
116 |
Q |
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| T |
6029744 |
ataaactttacgtgatctggtgactgtgatcaaataaagatgatgtagtttgacattggattgagaattgagatctataaacgacatcaatgaggatgcc |
6029843 |
T |
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| Q |
117 |
actcttaagctttcttctaagagctagagtgttgagatcaaatggacatatttcctatcatatttttccttctatttggacttgtttgaaactcaagttc |
216 |
Q |
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|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
6029844 |
acccttaagctttcttctaagagctagagtgttgagatcaaatggacatatttcctatcatatttttccttctatttggacttgtttgaaactcaagttc |
6029943 |
T |
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| Q |
217 |
tccattgtcaaggaacatgggcagtgactttattgacaagaccgtttcttttctcacgt |
275 |
Q |
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| T |
6029944 |
tccattgtcaaggaacatgggcagtgactttattgacaagaccgtttcttttctcacgt |
6030002 |
T |
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