View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13968_high_21 (Length: 279)
Name: NF13968_high_21
Description: NF13968
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13968_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 129; Significance: 8e-67; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 121 - 274
Target Start/End: Original strand, 3872885 - 3873038
Alignment:
| Q |
121 |
caaaccttcgtttctcgaaatctttcaagactcttaaaaattcataatacttatgcttctcatctttaaaagcatcctttatttcattgagatacatctt |
220 |
Q |
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| T |
3872885 |
caaaccttcgtttctcgaaatctttcaagactcttaaaaattcataatacttatgcttctcatctttaaaagcatcctttatttcattgagatacatctt |
3872984 |
T |
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| Q |
221 |
ggcttcatcataagttannnnnnnctttgcagctgatgatccccttgttctctg |
274 |
Q |
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|||||||| |||||||| |||||||||||||||||||||||||||||| |
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| T |
3872985 |
ggcttcatgataagttatttttttctttgcagctgatgatccccttgttctctg |
3873038 |
T |
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