View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1396_low_10 (Length: 474)

Name: NF1396_low_10
Description: NF1396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1396_low_10
NF1396_low_10
[»] chr4 (48 HSPs)
chr4 (1-286)||(35461951-35462237)
chr4 (380-457)||(19242693-19242770)
chr4 (380-451)||(12398-12469)
chr4 (380-451)||(1837600-1837671)
chr4 (380-451)||(8574914-8574985)
chr4 (380-451)||(15118443-15118514)
chr4 (380-447)||(15355416-15355483)
chr4 (380-451)||(18215365-18215436)
chr4 (380-451)||(44615288-44615359)
chr4 (380-451)||(44773178-44773249)
chr4 (380-451)||(52312510-52312581)
chr4 (380-453)||(19618263-19618336)
chr4 (380-451)||(3515007-3515078)
chr4 (380-451)||(14280316-14280387)
chr4 (380-451)||(18239510-18239581)
chr4 (380-451)||(23803356-23803427)
chr4 (380-451)||(50222430-50222501)
chr4 (380-451)||(51463959-51464030)
chr4 (401-454)||(39706356-39706409)
chr4 (391-451)||(7641284-7641344)
chr4 (391-451)||(12610950-12611010)
chr4 (391-451)||(44928982-44929042)
chr4 (401-451)||(44102214-44102264)
chr4 (397-454)||(6899891-6899948)
chr4 (401-454)||(7088877-7088930)
chr4 (401-454)||(7798774-7798827)
chr4 (397-454)||(7893703-7893760)
chr4 (401-454)||(52873435-52873488)
chr4 (380-448)||(20149832-20149900)
chr4 (391-451)||(54798812-54798872)
chr4 (401-452)||(22636437-22636488)
chr4 (380-449)||(14038653-14038723)
chr4 (380-454)||(15367690-15367764)
chr4 (380-454)||(15370018-15370092)
chr4 (380-454)||(15371202-15371276)
chr4 (380-454)||(15373483-15373557)
chr4 (380-454)||(15402703-15402777)
chr4 (380-454)||(16223532-16223606)
chr4 (401-454)||(3096293-3096346)
chr4 (401-454)||(12902757-12902810)
chr4 (401-454)||(15551817-15551870)
chr4 (397-454)||(16270299-16270356)
chr4 (401-451)||(16377589-16377639)
chr4 (401-450)||(12774011-12774060)
chr4 (380-453)||(14970798-14970871)
chr4 (397-454)||(16240033-16240090)
chr4 (401-454)||(17046487-17046540)
chr4 (401-454)||(44052829-44052882)
[»] chr8 (49 HSPs)
chr8 (44-221)||(34401672-34401849)
chr8 (380-457)||(19937097-19937174)
chr8 (380-451)||(1484402-1484473)
chr8 (380-451)||(5853383-5853454)
chr8 (380-451)||(14409535-14409606)
chr8 (380-451)||(20046286-20046357)
chr8 (380-451)||(20403227-20403298)
chr8 (380-451)||(22001753-22001824)
chr8 (380-451)||(26219717-26219788)
chr8 (380-451)||(26225338-26225409)
chr8 (380-447)||(45290786-45290853)
chr8 (380-451)||(4483281-4483351)
chr8 (380-451)||(15203322-15203393)
chr8 (380-447)||(16413407-16413474)
chr8 (380-451)||(19896265-19896336)
chr8 (391-457)||(6759255-6759321)
chr8 (401-454)||(6520368-6520421)
chr8 (401-454)||(38855319-38855372)
chr8 (391-451)||(4542475-4542535)
chr8 (391-454)||(16092400-16092463)
chr8 (380-451)||(41598188-41598259)
chr8 (401-454)||(7372778-7372831)
chr8 (401-454)||(18818477-18818530)
chr8 (401-454)||(18879299-18879352)
chr8 (401-454)||(20536208-20536261)
chr8 (401-450)||(21285601-21285650)
chr8 (401-454)||(21923996-21924049)
chr8 (401-454)||(22626736-22626789)
chr8 (401-454)||(23406379-23406432)
chr8 (397-453)||(23648554-23648610)
chr8 (401-453)||(28649112-28649164)
chr8 (380-438)||(15070571-15070629)
chr8 (401-454)||(17140916-17140969)
chr8 (401-454)||(21490995-21491048)
chr8 (401-454)||(21919068-21919121)
chr8 (401-454)||(31971257-31971310)
chr8 (397-452)||(18678166-18678221)
chr8 (380-431)||(19801472-19801523)
chr8 (408-454)||(21249384-21249430)
chr8 (408-454)||(21255222-21255268)
chr8 (408-454)||(22875065-22875111)
chr8 (401-451)||(25484380-25484430)
chr8 (401-454)||(5866342-5866395)
chr8 (401-454)||(16199712-16199765)
chr8 (401-454)||(21389518-21389571)
chr8 (401-454)||(21396048-21396101)
chr8 (401-454)||(21778844-21778897)
chr8 (401-454)||(21790541-21790594)
chr8 (401-454)||(45131064-45131117)
[»] chr1 (28 HSPs)
chr1 (380-457)||(15860100-15860177)
chr1 (380-454)||(13212953-13213027)
chr1 (380-451)||(13988866-13988937)
chr1 (380-451)||(21923382-21923453)
chr1 (380-451)||(23593826-23593897)
chr1 (380-451)||(29298137-29298208)
chr1 (380-451)||(29776688-29776759)
chr1 (380-457)||(21342090-21342167)
chr1 (380-452)||(21840766-21840838)
chr1 (380-451)||(21346961-21347032)
chr1 (380-451)||(21475178-21475249)
chr1 (380-451)||(31612313-31612384)
chr1 (380-448)||(40389157-40389225)
chr1 (380-451)||(21707167-21707238)
chr1 (380-451)||(21711709-21711780)
chr1 (383-453)||(16361915-16361985)
chr1 (397-450)||(21714546-21714599)
chr1 (397-454)||(27250793-27250850)
chr1 (403-451)||(433012-433060)
chr1 (401-453)||(20454621-20454673)
chr1 (401-453)||(50210281-50210333)
chr1 (380-451)||(16275455-16275526)
chr1 (401-451)||(34509783-34509833)
chr1 (401-454)||(20847222-20847275)
chr1 (380-451)||(22123158-22123230)
chr1 (397-453)||(22468760-22468816)
chr1 (401-454)||(21026680-21026733)
chr1 (397-453)||(20135188-20135244)
[»] chr3 (55 HSPs)
chr3 (380-451)||(12119816-12119887)
chr3 (380-451)||(10556985-10557056)
chr3 (380-451)||(36166598-36166669)
chr3 (380-451)||(6469225-6469296)
chr3 (380-451)||(7781438-7781509)
chr3 (380-451)||(8499518-8499589)
chr3 (380-451)||(9707698-9707769)
chr3 (380-451)||(15412429-15412500)
chr3 (380-451)||(17463178-17463249)
chr3 (380-451)||(28848702-28848773)
chr3 (380-451)||(29172674-29172745)
chr3 (380-451)||(34159326-34159397)
chr3 (380-451)||(44494809-44494880)
chr3 (380-451)||(45606998-45607069)
chr3 (380-451)||(55476491-55476562)
chr3 (380-451)||(55500942-55501013)
chr3 (380-449)||(16282902-16282971)
chr3 (380-451)||(13151881-13151953)
chr3 (380-451)||(13154346-13154418)
chr3 (380-451)||(8899094-8899165)
chr3 (380-451)||(15977515-15977586)
chr3 (380-451)||(16454372-16454443)
chr3 (380-451)||(21618449-21618520)
chr3 (380-451)||(38961982-38962053)
chr3 (382-451)||(17737236-17737305)
chr3 (397-454)||(23083425-23083482)
chr3 (380-452)||(13544024-13544096)
chr3 (380-451)||(10247814-10247885)
chr3 (380-447)||(12567564-12567631)
chr3 (391-454)||(14972854-14972917)
chr3 (380-451)||(17446746-17446816)
chr3 (380-451)||(17672626-17672697)
chr3 (380-451)||(50242822-50242893)
chr3 (397-451)||(24153272-24153326)
chr3 (401-451)||(27165250-27165300)
chr3 (401-451)||(28194693-28194743)
chr3 (381-451)||(40213768-40213838)
chr3 (401-451)||(45577950-45578000)
chr3 (401-454)||(13442274-13442327)
chr3 (401-454)||(17487856-17487909)
chr3 (401-454)||(17499338-17499391)
chr3 (401-454)||(20698503-20698556)
chr3 (401-449)||(41123892-41123940)
chr3 (401-454)||(11424827-11424880)
chr3 (401-454)||(12399209-12399262)
chr3 (401-454)||(13210395-13210448)
chr3 (401-454)||(14234487-14234540)
chr3 (401-454)||(18438534-18438587)
chr3 (401-454)||(26686887-26686940)
chr3 (391-454)||(25476443-25476506)
chr3 (397-452)||(46822267-46822322)
chr3 (401-451)||(53301619-53301669)
chr3 (401-450)||(12174327-12174376)
chr3 (401-450)||(16097332-16097381)
chr3 (401-454)||(43840932-43840985)
[»] scaffold0022 (1 HSPs)
scaffold0022 (380-451)||(116430-116501)
[»] chr5 (45 HSPs)
chr5 (380-451)||(2154705-2154776)
chr5 (380-451)||(264859-264930)
chr5 (380-451)||(10733031-10733102)
chr5 (380-451)||(11581290-11581361)
chr5 (380-451)||(20909012-20909083)
chr5 (380-451)||(20918039-20918110)
chr5 (380-451)||(29329934-29330005)
chr5 (380-451)||(39245136-39245207)
chr5 (380-451)||(39363384-39363455)
chr5 (383-451)||(10775770-10775838)
chr5 (380-448)||(18319125-18319193)
chr5 (380-451)||(38619434-38619505)
chr5 (380-451)||(42245456-42245527)
chr5 (380-450)||(23064512-23064582)
chr5 (401-454)||(21329565-21329618)
chr5 (401-454)||(21502224-21502277)
chr5 (397-454)||(24493569-24493626)
chr5 (380-451)||(20902100-20902172)
chr5 (380-448)||(24067110-24067178)
chr5 (380-451)||(29345980-29346051)
chr5 (401-451)||(36154892-36154942)
chr5 (401-454)||(8286911-8286964)
chr5 (397-454)||(13025311-13025368)
chr5 (397-454)||(13095495-13095552)
chr5 (401-454)||(21997602-21997655)
chr5 (401-454)||(23390564-23390617)
chr5 (401-454)||(25421532-25421585)
chr5 (391-454)||(1096467-1096530)
chr5 (392-451)||(20806845-20806904)
chr5 (380-451)||(29348453-29348524)
chr5 (380-451)||(29350926-29350997)
chr5 (380-451)||(31061068-31061139)
chr5 (380-451)||(32027393-32027464)
chr5 (401-451)||(24529223-24529273)
chr5 (401-454)||(19660903-19660956)
chr5 (401-454)||(21729132-21729185)
chr5 (401-454)||(21808457-21808510)
chr5 (397-450)||(26704075-26704128)
chr5 (397-450)||(26973808-26973861)
chr5 (403-451)||(22412187-22412235)
chr5 (401-454)||(26012103-26012154)
chr5 (401-454)||(9077952-9078005)
chr5 (401-450)||(21565546-21565595)
chr5 (401-450)||(22959600-22959649)
chr5 (401-454)||(36314577-36314630)
[»] scaffold0145 (3 HSPs)
scaffold0145 (380-456)||(9744-9820)
scaffold0145 (397-454)||(32942-32999)
scaffold0145 (397-454)||(38761-38818)
[»] chr2 (41 HSPs)
chr2 (380-448)||(24643041-24643109)
chr2 (380-451)||(571397-571468)
chr2 (380-451)||(6725995-6726066)
chr2 (380-451)||(18808943-18809014)
chr2 (380-451)||(23130862-23130933)
chr2 (380-451)||(23133329-23133400)
chr2 (380-451)||(23135590-23135661)
chr2 (380-451)||(23709623-23709694)
chr2 (380-451)||(23712104-23712175)
chr2 (380-451)||(26505379-26505450)
chr2 (380-451)||(26507857-26507928)
chr2 (380-451)||(34402613-34402684)
chr2 (380-451)||(39682313-39682384)
chr2 (380-448)||(21155151-21155219)
chr2 (380-451)||(24898286-24898358)
chr2 (380-451)||(24900769-24900841)
chr2 (380-451)||(24903246-24903318)
chr2 (380-451)||(24905723-24905795)
chr2 (380-451)||(24908198-24908270)
chr2 (380-451)||(24367774-24367845)
chr2 (380-451)||(24529620-24529691)
chr2 (380-451)||(28577099-28577170)
chr2 (380-451)||(38967374-38967445)
chr2 (380-453)||(32215012-32215085)
chr2 (391-454)||(22337115-22337178)
chr2 (380-451)||(32039589-32039660)
chr2 (380-451)||(45029945-45030016)
chr2 (401-451)||(298883-298933)
chr2 (401-451)||(22105412-22105462)
chr2 (391-449)||(43137301-43137359)
chr2 (397-454)||(8946657-8946714)
chr2 (401-454)||(22738247-22738300)
chr2 (401-454)||(23040257-23040310)
chr2 (401-454)||(23060513-23060566)
chr2 (401-454)||(23285865-23285918)
chr2 (401-454)||(38182-38235)
chr2 (401-450)||(7679589-7679638)
chr2 (401-454)||(22731302-22731355)
chr2 (401-454)||(23076442-23076495)
chr2 (401-454)||(23654454-23654507)
chr2 (401-454)||(20309108-20309161)
[»] scaffold0444 (1 HSPs)
scaffold0444 (380-451)||(13392-13463)
[»] scaffold0254 (1 HSPs)
scaffold0254 (380-451)||(20747-20818)
[»] scaffold0231 (1 HSPs)
scaffold0231 (380-451)||(22886-22957)
[»] scaffold0134 (1 HSPs)
scaffold0134 (380-451)||(37821-37892)
[»] scaffold0028 (5 HSPs)
scaffold0028 (380-451)||(136680-136751)
scaffold0028 (380-451)||(139149-139220)
scaffold0028 (380-451)||(144087-144158)
scaffold0028 (380-451)||(134211-134282)
scaffold0028 (380-451)||(141618-141689)
[»] scaffold0023 (5 HSPs)
scaffold0023 (380-447)||(17531-17598)
scaffold0023 (380-451)||(44454-44525)
scaffold0023 (380-451)||(94411-94482)
scaffold0023 (401-454)||(119875-119928)
scaffold0023 (401-450)||(100378-100427)
[»] scaffold0003 (2 HSPs)
scaffold0003 (380-451)||(158541-158612)
scaffold0003 (402-451)||(340016-340065)
[»] scaffold0001 (3 HSPs)
scaffold0001 (380-451)||(85671-85742)
scaffold0001 (380-447)||(501088-501155)
scaffold0001 (400-450)||(160688-160738)
[»] chr7 (49 HSPs)
chr7 (380-451)||(456321-456392)
chr7 (380-451)||(11972496-11972567)
chr7 (380-451)||(13869346-13869417)
chr7 (380-451)||(14949213-14949284)
chr7 (380-451)||(15376804-15376875)
chr7 (380-451)||(16213684-16213755)
chr7 (380-451)||(16232520-16232591)
chr7 (380-451)||(16410059-16410130)
chr7 (383-454)||(18430709-18430780)
chr7 (380-451)||(18640272-18640343)
chr7 (380-451)||(20385214-20385285)
chr7 (380-451)||(21189686-21189757)
chr7 (380-451)||(24702238-24702309)
chr7 (380-451)||(24704688-24704759)
chr7 (380-451)||(32125491-32125562)
chr7 (380-451)||(41522917-41522988)
chr7 (380-451)||(41525379-41525450)
chr7 (380-451)||(44116509-44116580)
chr7 (380-450)||(11393378-11393448)
chr7 (380-451)||(3386333-3386404)
chr7 (380-447)||(24275175-24275242)
chr7 (380-451)||(27216860-27216931)
chr7 (401-454)||(67745-67798)
chr7 (401-454)||(47831807-47831860)
chr7 (380-451)||(17062005-17062077)
chr7 (397-451)||(18456476-18456530)
chr7 (401-451)||(20110556-20110606)
chr7 (401-454)||(9509189-9509242)
chr7 (401-454)||(12698831-12698884)
chr7 (397-454)||(38227481-38227538)
chr7 (383-447)||(38898471-38898535)
chr7 (391-451)||(48273392-48273452)
chr7 (401-451)||(3564432-3564482)
chr7 (401-451)||(13831373-13831423)
chr7 (401-454)||(11996095-11996148)
chr7 (401-454)||(16386316-16386369)
chr7 (401-454)||(22072913-22072966)
chr7 (401-454)||(28505366-28505419)
chr7 (401-454)||(34200786-34200839)
chr7 (397-448)||(18154905-18154956)
chr7 (401-454)||(2280187-2280238)
chr7 (401-450)||(811199-811248)
chr7 (401-454)||(15754955-15755008)
chr7 (401-454)||(16495402-16495455)
chr7 (401-450)||(18005650-18005699)
chr7 (401-450)||(44014182-44014231)
chr7 (398-450)||(14932799-14932851)
chr7 (398-450)||(15356234-15356286)
chr7 (398-450)||(15360348-15360400)
[»] chr6 (50 HSPs)
chr6 (380-451)||(2291271-2291342)
chr6 (380-451)||(12742317-12742388)
chr6 (380-451)||(18334683-18334754)
chr6 (380-451)||(19005046-19005117)
chr6 (380-451)||(19859010-19859081)
chr6 (380-451)||(22782227-22782298)
chr6 (380-451)||(24422547-24422618)
chr6 (380-451)||(33861794-33861865)
chr6 (380-451)||(33864278-33864349)
chr6 (380-453)||(30676801-30676874)
chr6 (380-448)||(16448618-16448686)
chr6 (380-451)||(1541002-1541073)
chr6 (380-451)||(8055029-8055100)
chr6 (380-451)||(20556983-20557054)
chr6 (380-451)||(25656629-25656700)
chr6 (380-451)||(25754809-25754880)
chr6 (380-451)||(26924731-26924802)
chr6 (401-454)||(17287864-17287917)
chr6 (401-454)||(25714417-25714470)
chr6 (401-454)||(27333286-27333339)
chr6 (401-454)||(27394026-27394079)
chr6 (380-453)||(34963371-34963444)
chr6 (380-451)||(1595549-1595620)
chr6 (380-451)||(3852108-3852179)
chr6 (401-454)||(20076700-20076753)
chr6 (414-457)||(19008799-19008842)
chr6 (380-451)||(25688502-25688573)
chr6 (391-453)||(18409885-18409947)
chr6 (408-454)||(22080800-22080846)
chr6 (408-454)||(25629430-25629476)
chr6 (401-454)||(16496244-16496297)
chr6 (401-454)||(19303608-19303661)
chr6 (401-454)||(20638351-20638404)
chr6 (401-454)||(22780295-22780348)
chr6 (401-454)||(29060540-29060593)
chr6 (401-454)||(35245586-35245639)
chr6 (380-431)||(18821891-18821942)
chr6 (397-452)||(19848059-19848114)
chr6 (404-454)||(8227582-8227632)
chr6 (401-439)||(19668386-19668424)
chr6 (401-454)||(20109140-20109191)
chr6 (400-454)||(28496538-28496592)
chr6 (400-454)||(29808949-29809003)
chr6 (401-454)||(1561303-1561356)
chr6 (401-454)||(16920698-16920751)
chr6 (397-450)||(18907111-18907164)
chr6 (401-454)||(20361028-20361081)
chr6 (382-454)||(20593773-20593846)
chr6 (397-450)||(22432249-22432302)
chr6 (397-450)||(22438799-22438852)
[»] scaffold0454 (1 HSPs)
scaffold0454 (380-452)||(10772-10844)
[»] scaffold0819 (1 HSPs)
scaffold0819 (380-451)||(4214-4285)
[»] scaffold0716 (1 HSPs)
scaffold0716 (380-451)||(4694-4765)
[»] scaffold0247 (1 HSPs)
scaffold0247 (380-451)||(2220-2291)
[»] scaffold0230 (1 HSPs)
scaffold0230 (380-451)||(13947-14018)
[»] scaffold0142 (1 HSPs)
scaffold0142 (380-451)||(16784-16855)
[»] scaffold0120 (4 HSPs)
scaffold0120 (391-454)||(33014-33077)
scaffold0120 (391-454)||(45928-45991)
scaffold0120 (401-454)||(16113-16166)
scaffold0120 (392-454)||(17388-17450)
[»] scaffold0044 (1 HSPs)
scaffold0044 (380-451)||(40400-40471)
[»] scaffold0007 (1 HSPs)
scaffold0007 (380-451)||(161181-161252)
[»] scaffold0639 (1 HSPs)
scaffold0639 (397-454)||(8479-8536)
[»] scaffold0530 (1 HSPs)
scaffold0530 (401-454)||(1102-1155)
[»] scaffold0363 (1 HSPs)
scaffold0363 (383-452)||(9241-9310)
[»] scaffold0333 (2 HSPs)
scaffold0333 (401-454)||(6611-6664)
scaffold0333 (401-454)||(13991-14044)
[»] scaffold0243 (1 HSPs)
scaffold0243 (401-454)||(6191-6244)
[»] scaffold0020 (2 HSPs)
scaffold0020 (401-454)||(15845-15898)
scaffold0020 (397-450)||(178898-178951)
[»] scaffold0761 (1 HSPs)
scaffold0761 (380-448)||(4300-4368)
[»] scaffold1439 (1 HSPs)
scaffold1439 (380-451)||(106-177)
[»] scaffold0037 (1 HSPs)
scaffold0037 (380-451)||(82072-82143)
[»] scaffold0106 (3 HSPs)
scaffold0106 (397-451)||(15302-15356)
scaffold0106 (401-454)||(1289-1342)
scaffold0106 (401-454)||(7266-7319)
[»] scaffold0647 (1 HSPs)
scaffold0647 (401-454)||(6192-6245)
[»] scaffold0540 (1 HSPs)
scaffold0540 (401-454)||(3218-3271)
[»] scaffold0494 (1 HSPs)
scaffold0494 (380-453)||(12340-12413)
[»] scaffold0490 (1 HSPs)
scaffold0490 (393-454)||(1952-2013)
[»] scaffold0198 (1 HSPs)
scaffold0198 (397-450)||(23843-23896)
[»] scaffold0046 (4 HSPs)
scaffold0046 (401-454)||(28414-28467)
scaffold0046 (401-454)||(1997-2050)
scaffold0046 (401-454)||(4552-4605)
scaffold0046 (401-454)||(11292-11345)
[»] scaffold0029 (1 HSPs)
scaffold0029 (380-453)||(11286-11359)
[»] scaffold0021 (1 HSPs)
scaffold0021 (401-454)||(121766-121819)
[»] scaffold0016 (1 HSPs)
scaffold0016 (401-454)||(1851-1904)
[»] scaffold0011 (2 HSPs)
scaffold0011 (401-454)||(51913-51966)
scaffold0011 (401-454)||(168046-168099)
[»] scaffold0908 (1 HSPs)
scaffold0908 (401-453)||(3254-3306)
[»] scaffold0149 (1 HSPs)
scaffold0149 (380-451)||(29931-30003)
[»] scaffold0131 (1 HSPs)
scaffold0131 (398-450)||(36454-36506)
[»] scaffold0122 (2 HSPs)
scaffold0122 (391-451)||(44765-44825)
scaffold0122 (401-447)||(26133-26179)
[»] scaffold0121 (1 HSPs)
scaffold0121 (402-454)||(8598-8650)
[»] scaffold0101 (1 HSPs)
scaffold0101 (380-448)||(1372-1440)
[»] scaffold0056 (1 HSPs)
scaffold0056 (401-453)||(17285-17337)
[»] scaffold0394 (1 HSPs)
scaffold0394 (408-451)||(12064-12107)
[»] scaffold0217 (1 HSPs)
scaffold0217 (391-454)||(16658-16721)
[»] scaffold0031 (2 HSPs)
scaffold0031 (380-431)||(20469-20520)
scaffold0031 (401-454)||(128751-128804)
[»] scaffold0261 (1 HSPs)
scaffold0261 (401-451)||(15664-15714)
[»] scaffold1842 (1 HSPs)
scaffold1842 (401-454)||(1116-1169)
[»] scaffold1765 (1 HSPs)
scaffold1765 (401-450)||(1086-1135)
[»] scaffold0621 (1 HSPs)
scaffold0621 (401-454)||(6535-6588)
[»] scaffold0456 (1 HSPs)
scaffold0456 (401-454)||(10491-10544)
[»] scaffold0358 (1 HSPs)
scaffold0358 (401-454)||(4712-4765)
[»] scaffold0292 (2 HSPs)
scaffold0292 (401-454)||(343-396)
scaffold0292 (403-454)||(3470-3521)
[»] scaffold0193 (1 HSPs)
scaffold0193 (401-454)||(13211-13264)
[»] scaffold0113 (1 HSPs)
scaffold0113 (401-454)||(32067-32120)
[»] scaffold0080 (1 HSPs)
scaffold0080 (397-454)||(39913-39970)
[»] scaffold0026 (2 HSPs)
scaffold0026 (397-454)||(25896-25953)
scaffold0026 (397-454)||(39858-39915)
[»] scaffold0141 (1 HSPs)
scaffold0141 (401-452)||(39479-39530)
[»] scaffold0049 (1 HSPs)
scaffold0049 (401-452)||(75282-75333)
[»] scaffold0598 (1 HSPs)
scaffold0598 (404-454)||(1120-1170)
[»] scaffold0074 (1 HSPs)
scaffold0074 (401-451)||(38770-38820)
[»] scaffold0034 (1 HSPs)
scaffold0034 (401-454)||(32538-32589)
[»] scaffold0503 (1 HSPs)
scaffold0503 (382-431)||(11986-12035)
[»] scaffold0427 (1 HSPs)
scaffold0427 (401-454)||(13497-13550)
[»] scaffold0403 (1 HSPs)
scaffold0403 (401-454)||(4849-4902)
[»] scaffold0395 (1 HSPs)
scaffold0395 (401-454)||(4901-4954)
[»] scaffold0207 (1 HSPs)
scaffold0207 (401-450)||(2713-2762)
[»] scaffold0184 (1 HSPs)
scaffold0184 (401-454)||(1137-1190)
[»] scaffold0175 (2 HSPs)
scaffold0175 (401-454)||(273-326)
scaffold0175 (401-454)||(34123-34176)
[»] scaffold0125 (1 HSPs)
scaffold0125 (401-450)||(45860-45909)
[»] scaffold0114 (1 HSPs)
scaffold0114 (401-454)||(15531-15584)
[»] scaffold0102 (1 HSPs)
scaffold0102 (401-450)||(19268-19317)
[»] scaffold0008 (1 HSPs)
scaffold0008 (401-450)||(14765-14814)


Alignment Details
Target: chr4 (Bit Score: 195; Significance: 1e-106; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 286
Target Start/End: Original strand, 35461951 - 35462237
Alignment:
Q  1 ttataaacagcttgtagtttgttctannnnnnnn-aatgttttcttttctagaaatattgatttcacgtaggaaagcaatgatggactagcatagatccc 99  Q
    ||||||||||||||||||||||||||         |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  35461951 ttataaacagcttgtagtttgttctattctgttttaatgttttcttttctagaaacattgatttcacgtaggaaagtaatgatggactagcatagatccc 35462050  T
Q  100 ttaatatgattcaaacaatagattagagaaagctctaaattgggaatttaaacaaaaatgataccttcttaaaaacgtaaatgggttactagcaatgggt 199  Q
    ||||| ||| ||||||||||||||||||||| || |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  35462051 ttaatgtgactcaaacaatagattagagaaaactataaattgggaattttaacaaaaatgatactttcttaaaaacgtaaatgggttactagcattgggt 35462150  T
Q  200 aaagatgttttctttagttctcttcctattctaatttataattctcaccgatgtggcctctgtgcatcaaattatttgttaatttaa 286  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||| || ||| ||||||||    
T  35462151 aaagacgttttctttagttctcttcctattctaatttataattctcaccgatgcagcctctgtgcatcaaactacttgctaatttaa 35462237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 19242770 - 19242693
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgtcca 457  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  19242770 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgaagtcca 19242693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 12398 - 12469
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  12398 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 12469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 1837600 - 1837671
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  1837600 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 1837671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 8574914 - 8574985
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| ||||| |||||||||||||    
T  8574914 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttaattaagatgatga 8574985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 15118443 - 15118514
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  15118443 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15118514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 15355416 - 15355483
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||    
T  15355416 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 15355483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 18215365 - 18215436
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  18215365 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18215436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 44615359 - 44615288
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  44615359 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44615288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 44773178 - 44773249
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  44773178 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44773249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 52312581 - 52312510
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  52312581 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 52312510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 19618263 - 19618336
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  19618263 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 19618336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 3515078 - 3515007
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||  ||||| |||||||||||||||||| |||||||||||||||||||    
T  3515078 ttgtatactgctgtgttgctgttgttttttaactaagctgcatgagtcggtctaagttgattaagatgatga 3515007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 14280387 - 14280316
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||||||  |||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  14280387 ttgtatactgccgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 14280316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 18239510 - 18239581
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||  ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  18239510 ttgtatactgttgtgctgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18239581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 23803356 - 23803427
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23803356 ttgtatactactgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23803427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 50222430 - 50222501
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||| || ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  50222430 ttgtataatgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 50222501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 51463959 - 51464030
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  51463959 ttgtatactactgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 51464030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 39706356 - 39706409
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  39706356 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 39706409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 7641284 - 7641344
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  7641284 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 7641344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 12611010 - 12610950
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  12611010 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 12610950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 44928982 - 44929042
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  44928982 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44929042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 44102264 - 44102214
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  44102264 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44102214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 6899948 - 6899891
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| ||| |||||||||||||| |||||||| |||||||||||||    
T  6899948 gctattgttatttaactaagatgcatgagtcggtctaagttgatgaagatgatgatgt 6899891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 7088930 - 7088877
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  7088930 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 7088877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 7798827 - 7798774
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  7798827 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 7798774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 7893760 - 7893703
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| ||||||||||| |||||| |||||||| |||||||||||||    
T  7893760 gctattgttatttaactaagctgcatgaatcggtctaagttgatgaagatgatgatgt 7893703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 52873435 - 52873488
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  52873435 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 52873488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 20149900 - 20149832
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||||||||||||| |||||| || |  ||| |||||||||| ||| ||||||||||||||||    
T  20149900 ttgtatactgatgtgtcgctgttgttattttatcaagttgcatgagtcagtctaagttgattaagatga 20149832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 54798812 - 54798872
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| | ||| |||||||||||||||||| |||||||||||||||||||    
T  54798812 tgtgttgctgttgttattcaactaagctgcatgagtcggtctaagttgattaagatgatga 54798872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 22636488 - 22636437
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||    
T  22636488 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgat 22636437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 449
Target Start/End: Complemental strand, 14038723 - 14038653
Alignment:
Q  380 ttgtatactg-atgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgat 449  Q
    |||||||||| |||||| ||| |||||| ||||| |||||||||||||| ||| |||||||| ||||||||    
T  14038723 ttgtatactgcatgtgttgctgttgttatttaactaagctgcatgagtcagtctaagttgatgaagatgat 14038653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 15367764 - 15367690
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| ||| |||| | | |||||| ||||||    
T  15367764 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15367690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 15370092 - 15370018
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| ||| |||| | | |||||| ||||||    
T  15370092 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15370018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 15371276 - 15371202
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| ||| |||| | | |||||| ||||||    
T  15371276 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15371202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 15373557 - 15373483
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| ||| |||| | | |||||| ||||||    
T  15373557 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15373483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 15402777 - 15402703
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| ||| |||| | | |||||| ||||||    
T  15402777 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 15402703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 454
Target Start/End: Complemental strand, 16223606 - 16223532
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||| ||| |||| | | |||||| ||||||    
T  16223606 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcagtctaagtcgttgaagatgttgatgt 16223532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 3096346 - 3096293
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  3096346 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 3096293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 12902810 - 12902757
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  12902810 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 12902757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 15551870 - 15551817
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  15551870 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 15551817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 16270299 - 16270356
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||  |||||||||||||||||| || ||||| |||||||||||||    
T  16270299 gctattgttatttaattaagctgcatgagtcggtctaacttgatgaagatgatgatgt 16270356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 16377589 - 16377639
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||| ||||    
T  16377589 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagataatga 16377639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 12774060 - 12774011
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  12774060 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 12774011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 14970798 - 14970871
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    ||||||| || ||| | ||| |||||| ||||| ||||||||||||| |||| ||||||||||| ||| |||||    
T  14970798 ttgtatattgctgttttgctgttgttatttaactaagctgcatgagttggtctaagttgattaaaatgttgatg 14970871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 16240033 - 16240090
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||  ||| ||||||||| |||| |||||||| |||||||||||||    
T  16240033 gctattgttatttaattaagttgcatgagttggtctaagttgatgaagatgatgatgt 16240090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 17046540 - 17046487
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  17046540 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 17046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 44052882 - 44052829
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| |||||  ||||||||||||||| | |||||||| |||||||||||||    
T  44052882 ttgttatttaactgagctgcatgagtcggcctaagttgatgaagatgatgatgt 44052829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 6e-41; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 44 - 221
Target Start/End: Original strand, 34401672 - 34401849
Alignment:
Q  44 ttttctagaaatattgatttcacgtaggaaagcaatgatggactagcatagatcccttaatatgattcaaacaatagattagagaaagctctaaattggg 143  Q
    ||||||||||| ||||||||||| ||||||||||||||||| |  |||||||| ||||||| ||| |||||| ||||||||||||| |||| |||| |      
T  34401672 ttttctagaaacattgatttcacataggaaagcaatgatgggccggcatagattccttaatgtgactcaaaccatagattagagaatgctcaaaatagaa 34401771  T
Q  144 aatttaaacaaaaatgataccttcttaaaaacgtaaatgggttactagcaatgggtaaagatgttttctttagttctc 221  Q
    ||||  |||||||| || || |||||| |||| |||||||||| |||||||||||||||||||||| |||||||||||    
T  34401772 aattctaacaaaaacgacactttcttagaaacataaatgggtttctagcaatgggtaaagatgtttgctttagttctc 34401849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 19937097 - 19937174
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgtcca 457  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  19937097 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtccaagttgattaagatgatgaagtcca 19937174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 1484473 - 1484402
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  1484473 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 1484402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 5853383 - 5853454
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  5853383 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 5853454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 14409535 - 14409606
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  14409535 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 14409606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 20046286 - 20046357
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20046286 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20046357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 20403298 - 20403227
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20403298 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20403227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 22001824 - 22001753
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  22001824 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22001753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 26219788 - 26219717
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||| ||||||||    
T  26219788 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattatgatgatga 26219717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 26225338 - 26225409
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||| || ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  26225338 ttgtatattgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26225409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 45290786 - 45290853
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||    
T  45290786 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 45290853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 4483351 - 4483281
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  4483351 ttgtatactgttgtgttgctgttgtta-ttaactaagctgcatgagtcggtctaagttgattaagatgatga 4483281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 15203322 - 15203393
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||| || |||||||||||||||||||    
T  15203322 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcgctctaagttgattaagatgatga 15203393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 16413407 - 16413474
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||    
T  16413407 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 16413474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 19896336 - 19896265
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||| | ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  19896336 ttgtataccgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 19896265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 391 - 457
Target Start/End: Complemental strand, 6759321 - 6759255
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgtcca 457  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||| ||||||||||||||||    
T  6759321 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgtcca 6759255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 6520421 - 6520368
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6520421 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6520368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 38855319 - 38855372
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  38855319 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 38855372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 4542475 - 4542535
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  4542475 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 4542535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 16092400 - 16092463
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  16092400 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 16092463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 41598259 - 41598188
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| | ||| |||||||||||||||||| |||||||||||||||||||    
T  41598259 ttgtatactactgtgttgctgttgttattcaactaagctgcatgagtcggtctaagttgattaagatgatga 41598188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 7372831 - 7372778
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  7372831 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 7372778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 18818477 - 18818530
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  18818477 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 18818530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 18879299 - 18879352
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  18879299 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 18879352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 20536261 - 20536208
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  20536261 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 20536208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 21285650 - 21285601
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| |||||||||||||||||||||||| ||||||||||||| ||||    
T  21285650 ttgttatttaacaaagctgcatgagtcggtctaagttgattaagaagatg 21285601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21923996 - 21924049
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  21923996 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 21924049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 22626789 - 22626736
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  22626789 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 22626736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 23406432 - 23406379
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23406432 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23406379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 23648610 - 23648554
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||||||||| ||| |||||||||| ||| ||||||||||||||| |||||    
T  23648610 gctattgttaattaactaagttgcatgagtcagtctaagttgattaagatgttgatg 23648554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 28649112 - 28649164
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||||    
T  28649112 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 28649164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 380 - 438
Target Start/End: Complemental strand, 15070629 - 15070571
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttg 438  Q
    |||||||||  ||||||||| |||||| ||||| |||||||||||||||||| ||||||    
T  15070629 ttgtatactactgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttg 15070571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 17140969 - 17140916
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  17140969 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 17140916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 21491048 - 21490995
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  21491048 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21490995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21919068 - 21919121
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  21919068 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21919121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 31971310 - 31971257
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  31971310 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 31971257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 18678166 - 18678221
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||||||| ||||| ||| |||||||||| ||| ||||||||||||||| ||||    
T  18678166 gctattgttatttaactaagttgcatgagtcagtctaagttgattaagatgttgat 18678221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 19801472 - 19801523
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtc 431  Q
    |||||||||| ||||| |||||||||| ||||| |||||||||||| |||||    
T  19801472 ttgtatactgttgtgttgctattgttatttaactaagctgcatgagccggtc 19801523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 454
Target Start/End: Complemental strand, 21249430 - 21249384
Alignment:
Q  408 ttaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  21249430 ttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21249384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 454
Target Start/End: Complemental strand, 21255268 - 21255222
Alignment:
Q  408 ttaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  21255268 ttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21255222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 408 - 454
Target Start/End: Complemental strand, 22875111 - 22875065
Alignment:
Q  408 ttaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||||||||||||||| || ||||| |||||||||||||    
T  22875111 ttaactaagctgcatgagtcggtctaaattgatgaagatgatgatgt 22875065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 25484380 - 25484430
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||| |||| |||| |||||||||||||||||||    
T  25484380 ttgttatttaactaagctgcacgagttggtctaagttgattaagatgatga 25484430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 5866342 - 5866395
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  5866342 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 5866395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 16199712 - 16199765
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  16199712 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 16199765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21389518 - 21389571
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  21389518 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21389571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21396048 - 21396101
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  21396048 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21396101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21778844 - 21778897
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  21778844 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21778897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21790541 - 21790594
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  21790541 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 21790594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 45131064 - 45131117
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  45131064 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 45131117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 3e-24; HSPs: 28)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 380 - 457
Target Start/End: Original strand, 15860100 - 15860177
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgtcca 457  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  15860100 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcggtccaagttgattaagatgatgaagtcca 15860177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 380 - 454
Target Start/End: Original strand, 13212953 - 13213027
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| || |||||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  13212953 ttgtatactgttgcgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 13213027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 13988937 - 13988866
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  13988937 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 13988866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 21923382 - 21923453
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  21923382 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21923453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 23593826 - 23593897
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23593826 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23593897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 29298208 - 29298137
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  29298208 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29298137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 29776759 - 29776688
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  29776759 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29776688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 457
Target Start/End: Complemental strand, 21342167 - 21342090
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgtcca 457  Q
    |||||||||| ||||||  | |||||| ||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  21342167 ttgtatactgctgtgtctttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgaagtcca 21342090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 21840838 - 21840766
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  21840838 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 21840766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 21347032 - 21346961
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||  | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  21347032 ttgtatactgctgtgtctttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21346961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 21475178 - 21475249
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||| |||| |||||||||||||||||||    
T  21475178 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagttggtctaagttgattaagatgatga 21475249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 31612384 - 31612313
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  31612384 ttgtatactattgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 31612313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 40389225 - 40389157
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||||||||||||| |||||| ||||| ||| |||||||||| ||| | ||||||||||||||    
T  40389225 ttgtatactgatgtgtcgctgttgttatttaaccaagttgcatgagtcagtctaggttgattaagatga 40389157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 21707238 - 21707167
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| | | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  21707238 ttgtatactattgtgttgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21707167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 21711780 - 21711709
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| | | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  21711780 ttgtatactattgtgttgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21711709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 383 - 453
Target Start/End: Complemental strand, 16361985 - 16361915
Alignment:
Q  383 tatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    ||||||| ||||| ||| | |||| ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  16361985 tatactgttgtgttgctgtcgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 16361915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 21714599 - 21714546
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| |||||||||    
T  21714599 gctattgttatttaaccaagctgcatgagtcggtctaagttgatcaagatgatg 21714546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 27250793 - 27250850
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  27250793 gctattgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 27250850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 403 - 451
Target Start/End: Complemental strand, 433060 - 433012
Alignment:
Q  403 gttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  433060 gttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 433012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 20454621 - 20454673
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  20454621 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 20454673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 50210281 - 50210333
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||||    
T  50210281 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 50210333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 16275455 - 16275526
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| | ||||| | |||||| ||||| ||| || ||||||||||| |||||||||||||||||||    
T  16275455 ttgtatactgctatgtcgttgttgttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 16275526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 34509833 - 34509783
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||    
T  34509833 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatga 34509783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 20847222 - 20847275
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  20847222 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 20847275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 22123158 - 22123230
Alignment:
Q  380 ttgtatactgatgtgtcgctatt-gttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| || | || ||||| |||||||||||||||||| |||| ||||||||||||||    
T  22123158 ttgtatactgttgtgttgctgtttgctatttaactaagctgcatgagtcggtctaagtagattaagatgatga 22123230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 397 - 453
Target Start/End: Original strand, 22468760 - 22468816
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||| ||||| ||| |||||||||| ||| ||||||||||||||| |||||    
T  22468760 gctattgttatttaactaagttgcatgagtcagtctaagttgattaagatgttgatg 22468816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 21026733 - 21026680
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | | |||||||||||    
T  21026733 ttgttatttaactaagctgcatgagtcggtctaagttgttgacgatgatgatgt 21026680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 397 - 453
Target Start/End: Complemental strand, 20135244 - 20135188
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||  ||||| ||| |||||||||| ||| ||||||||||||||| |||||    
T  20135244 gctattgttgtttaactaagttgcatgagtcagtctaagttgattaagatgttgatg 20135188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 5e-23; HSPs: 55)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 12119816 - 12119887
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||    
T  12119816 ttgtatactgctgtgtcgctgttgttatttaacaaagctgcatgagtcggtctaagttgattaagatgatga 12119887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 10557056 - 10556985
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  10557056 ttgtatgctgatgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 10556985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 36166669 - 36166598
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  36166669 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 36166598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 6469225 - 6469296
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  6469225 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 6469296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 7781438 - 7781509
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  7781438 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 7781509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 8499589 - 8499518
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  8499589 ttgtatactactgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 8499518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 9707698 - 9707769
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  9707698 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 9707769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 15412500 - 15412429
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  15412500 ttgtatactactgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15412429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 17463249 - 17463178
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  17463249 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17463178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 28848702 - 28848773
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  28848702 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28848773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 29172674 - 29172745
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  29172674 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29172745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 34159397 - 34159326
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  34159397 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 34159326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 44494880 - 44494809
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| ||||||||||||||| || |||||||||||||||||||    
T  44494880 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcgatctaagttgattaagatgatga 44494809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 45606998 - 45607069
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  45606998 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 45607069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 55476562 - 55476491
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  55476562 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 55476491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 55501013 - 55500942
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  55501013 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 55500942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 449
Target Start/End: Original strand, 16282902 - 16282971
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgat 449  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  16282902 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgat 16282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 13151881 - 13151953
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  13151881 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 13151953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 13154346 - 13154418
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  13154346 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 13154418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 8899165 - 8899094
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| || ||||||||||||||||    
T  8899165 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaaattgattaagatgatga 8899094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 15977586 - 15977515
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  15977586 ttgtatactattgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15977515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 16454372 - 16454443
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||| |||||||||||||| |||||||||||||||||||    
T  16454372 ttgtatactgttgtgttgctgttgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 16454443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 21618520 - 21618449
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| ||||||||| ||| |||||    
T  21618520 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattgagaagatga 21618449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 38961982 - 38962053
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||| |||||||    
T  38961982 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaaaatgatga 38962053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 382 - 451
Target Start/End: Complemental strand, 17737305 - 17737236
Alignment:
Q  382 gtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| || ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  17737305 gtatattgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17737236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 454
Target Start/End: Original strand, 23083425 - 23083482
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23083425 gctattgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23083482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 13544096 - 13544024
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    ||||||| || ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  13544096 ttgtatattgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 13544024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 10247814 - 10247885
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||  ||| |||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  10247814 ttgtatactgttgtgctgctgttgttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 10247885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 447
Target Start/End: Complemental strand, 12567631 - 12567564
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    ||||||| || ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||    
T  12567631 ttgtatattgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 12567564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 14972917 - 14972854
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  14972917 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 14972854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 17446746 - 17446816
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||| ||| |||||||||||||||||||    
T  17446746 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtc-gtctaagttgattaagatgatga 17446816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 17672697 - 17672626
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| | ||| | | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  17672697 ttgtatactgctatgttgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17672626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 50242893 - 50242822
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||| |||||||    
T  50242893 ttgtatactactgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaaaatgatga 50242822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 24153272 - 24153326
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  24153272 gctatcgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24153326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 27165300 - 27165250
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  27165300 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 27165250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 28194743 - 28194693
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  28194743 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28194693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 381 - 451
Target Start/End: Original strand, 40213768 - 40213838
Alignment:
Q  381 tgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||||| ||||| | | |||||| ||||| ||||| |||||||||||| |||||||||||||||||||    
T  40213768 tgtatactgctgtgttgatgttgttatttaactaagctacatgagtcggtctaagttgattaagatgatga 40213838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 45577950 - 45578000
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  45577950 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 45578000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 13442327 - 13442274
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  13442327 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 13442274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 17487909 - 17487856
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  17487909 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 17487856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 17499391 - 17499338
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  17499391 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 17499338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 20698503 - 20698556
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  20698503 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 20698556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 449
Target Start/End: Complemental strand, 41123940 - 41123892
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgat 449  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  41123940 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgat 41123892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 11424827 - 11424880
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  11424827 ttgttatttaactaagctgcatgagtcagtctaagttgatgaagatgatgatgt 11424880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 12399262 - 12399209
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  12399262 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 12399209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 13210395 - 13210448
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  13210395 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 13210448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 14234540 - 14234487
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||||||||||| || ||| ||||||||||||||||||||||    
T  14234540 ttgttatttaactaagctgcatgaatcagtctaagttgattaagatgatgatgt 14234487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 18438587 - 18438534
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||||| |||||||||||| |||||||| |||||||||||||    
T  18438587 ttgttatttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 18438534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 26686940 - 26686887
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||  |||||||||||||    
T  26686940 ttgttatttaactaagctgcatgagtcggtctaagttgaagaagatgatgatgt 26686887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 25476443 - 25476506
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||  ||||| ||||| |||||||||||| |||||||| |||||||||||||    
T  25476443 tgtgttgctgttgttttttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 25476506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 452
Target Start/End: Complemental strand, 46822322 - 46822267
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||||||| ||||| ||| |||||||||| ||| ||||||||||||||| ||||    
T  46822322 gctattgttatttaactaagttgcatgagtcagtctaagttgattaagatgttgat 46822267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 53301619 - 53301669
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| ||| || ||||||||||| |||||||||||||||||||    
T  53301619 ttgttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 53301669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 12174327 - 12174376
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  12174327 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 12174376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 16097381 - 16097332
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  16097381 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 16097332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 43840985 - 43840932
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||  |||||||| ||||| |||||||    
T  43840985 ttgttatttaactaagctgcatgagtcggtttaagttgatgaagataatgatgt 43840932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 116501 - 116430
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  116501 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 116430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 1e-20; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 2154705 - 2154776
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  2154705 ttgtatactgttgtgttgctattgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 2154776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 264859 - 264930
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  264859 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 264930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 10733031 - 10733102
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  10733031 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 10733102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 11581290 - 11581361
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  11581290 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 11581361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 20909083 - 20909012
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20909083 ttgtatactgttgtgttgcttttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20909012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 20918039 - 20918110
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20918039 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20918110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 29330005 - 29329934
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  29330005 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 29329934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 39245207 - 39245136
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  39245207 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 39245136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 39363455 - 39363384
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  39363455 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 39363384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 383 - 451
Target Start/End: Original strand, 10775770 - 10775838
Alignment:
Q  383 tatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||| ||||||||| | |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  10775770 tatactgctgtgtcgctgtcgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 10775838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 18319125 - 18319193
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||  ||||||||||||||||    
T  18319125 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcggtttaagttgattaagatga 18319193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 38619505 - 38619434
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||||| | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  38619505 ttgtatactactgtgtcgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 38619434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 42245456 - 42245527
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||| |||||||||||||| |||||||||||||||||||    
T  42245456 ttgtatactgttgtgttgctgttgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 42245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 380 - 450
Target Start/End: Complemental strand, 23064582 - 23064512
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||  ||||||| | |||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  23064582 ttgtatactactgtgtcgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatg 23064512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21329565 - 21329618
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  21329565 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 21329618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21502224 - 21502277
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||| |||||||||||||||||| ||||||||||||||||||||||    
T  21502224 ttgtttattaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 21502277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 24493626 - 24493569
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  24493626 gctattgttacttaaccaagctgcatgagtcggtctaagttgatgaagatgatgatgt 24493569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 20902100 - 20902172
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttg-attaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||| |||||||||||||    
T  20902100 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgaattaagatgatga 20902172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 24067178 - 24067110
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||  ||||||| ||||||||||||||||    
T  24067178 ttgtatactgttgtgtcgctgttgttatttaaccaagctgcattggtcggtctaagttgattaagatga 24067110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 29346051 - 29345980
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||  ||| |||||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  29346051 ttgtatactgttgtgatgctgttgttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 29345980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 36154892 - 36154942
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  36154892 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 36154942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 8286911 - 8286964
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  8286911 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8286964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 13025368 - 13025311
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| | |||||||||||||||| |||||||| |||||||||||||    
T  13025368 gctattgttatttaactatgctgcatgagtcggtctaagttgatgaagatgatgatgt 13025311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 13095552 - 13095495
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| | |||||||||||||||| |||||||| |||||||||||||    
T  13095552 gctattgttatttaactatgctgcatgagtcggtctaagttgatgaagatgatgatgt 13095495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21997602 - 21997655
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  21997602 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 21997655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 23390564 - 23390617
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23390564 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23390617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 25421585 - 25421532
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  25421585 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 25421532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 1096530 - 1096467
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||| |||||| ||||||    
T  1096530 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgttgatgt 1096467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 392 - 451
Target Start/End: Original strand, 20806845 - 20806904
Alignment:
Q  392 gtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||| |||||| ||||  |||||||||||||||||| | |||||||||||||||||    
T  20806845 gtgtcgctgttgttatttaattaagctgcatgagtcggtctatgttgattaagatgatga 20806904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 29348524 - 29348453
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||  ||| || ||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  29348524 ttgtatactgttgtgatgctgttcttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 29348453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 29350997 - 29350926
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||  ||| || ||| ||||| |||||| ||||||||||| |||||||||||||||||||    
T  29350997 ttgtatactgttgtgatgctgttcttatttaactaagctgtatgagtcggtctaagttgattaagatgatga 29350926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 31061139 - 31061068
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||| | ||| |||||| ||||| ||| |||||||||||||| |||||||||||||||||||    
T  31061139 ttgtatactactgttttgctgttgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 31061068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 32027464 - 32027393
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| | | |||||| ||||| ||| || ||||||||||| |||||||||||||||||||    
T  32027464 ttgtatactgttgtgttgttgttgttatttaactaagttgtatgagtcggtctaagttgattaagatgatga 32027393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 24529273 - 24529223
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||    
T  24529273 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatga 24529223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 19660903 - 19660956
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  19660903 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 19660956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21729132 - 21729185
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  21729132 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21729185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 21808457 - 21808510
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  21808457 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 21808510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 26704128 - 26704075
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| |||||||||||||||||| |||| ||| |||||||||    
T  26704128 gctattgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatgatg 26704075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 26973861 - 26973808
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| |||||||||||||||||| |||| ||| |||||||||    
T  26973861 gctattgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatgatg 26973808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 403 - 451
Target Start/End: Complemental strand, 22412235 - 22412187
Alignment:
Q  403 gttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||| ||||| ||||| |||||||||||| |||||||||||||||||||    
T  22412235 gttatttaactaagctacatgagtcggtctaagttgattaagatgatga 22412187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 26012103 - 26012154
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||| |||||||||||||||||| |||||||  |||||||||||||    
T  26012103 ttgtttattaactaagctgcatgagtcggtctaagttga--aagatgatgatgt 26012154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 9078005 - 9077952
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||| ||| ||| |||||||| |||||||||||||    
T  9078005 ttgttatttaactaagctgcatgggtcagtctaagttgatgaagatgatgatgt 9077952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 21565595 - 21565546
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  21565595 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 21565546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 22959600 - 22959649
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  22959600 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 22959649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 36314630 - 36314577
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  36314630 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 36314577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145 (Bit Score: 49; Significance: 8e-19; HSPs: 3)
Name: scaffold0145
Description:

Target: scaffold0145; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 456
Target Start/End: Complemental strand, 9820 - 9744
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgtcc 456  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||| ||||    
T  9820 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgaagtcc 9744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 32999 - 32942
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||  |||||||||||||||||| || ||||| |||||||||||||    
T  32999 gctattgttatttaattaagctgcatgagtcggtctaacttgatgaagatgatgatgt 32942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0145; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 38818 - 38761
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||  ||||||||||| |||||| |||||||| |||||||||||||    
T  38818 gctattgttatttaattaagctgcatgactcggtctaagttgatgaagatgatgatgt 38761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 8e-19; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 24643041 - 24643109
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||||||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  24643041 ttgtatactgatgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatga 24643109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 571468 - 571397
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  571468 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 571397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 6726066 - 6725995
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  6726066 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 6725995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 18809014 - 18808943
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  18809014 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18808943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 23130933 - 23130862
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23130933 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23130862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 23133400 - 23133329
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23133400 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23133329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 23135661 - 23135590
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23135661 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23135590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 23709623 - 23709694
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23709623 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23709694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 23712104 - 23712175
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  23712104 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 23712175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 26505450 - 26505379
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  26505450 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26505379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 26507928 - 26507857
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  26507928 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26507857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 34402613 - 34402684
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  34402613 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 34402684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 39682384 - 39682313
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  39682384 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 39682313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 21155151 - 21155219
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  21155151 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatga 21155219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 24898286 - 24898358
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  24898286 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24898358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 24900769 - 24900841
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  24900769 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24900841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 24903246 - 24903318
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  24903246 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24903318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 24905723 - 24905795
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  24905723 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24905795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 24908198 - 24908270
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaac-aaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  24908198 ttgtatactgttgtgttgctgttgttatttaactaaagctgcatgagtcggtctaagttgattaagatgatga 24908270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 24367845 - 24367774
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||| |||||||    
T  24367845 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaaaatgatga 24367774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 24529620 - 24529691
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||||||||| | | |||||| ||||| | |||||||||||||||| |||||||||||||||||||    
T  24529620 ttgtatactgatgtgttgttgttgttatttaactatgctgcatgagtcggtctaagttgattaagatgatga 24529691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 28577170 - 28577099
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| || || ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  28577170 ttgtatactgttgcgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 28577099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 38967445 - 38967374
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||| || ||||||| | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  38967445 ttgtatattgttgtgtcgatgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 38967374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 32215012 - 32215085
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||| ||||| | | |||||| ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  32215012 ttgtatactgctgtgttgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 32215085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 22337178 - 22337115
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  22337178 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 22337115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 32039589 - 32039660
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| |||||  || |||||| ||||| |||||||||||| ||||| |||||||||||||||||||    
T  32039589 ttgtatactgttgtgttactgttgttatttaactaagctgcatgagccggtctaagttgattaagatgatga 32039660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 45029945 - 45030016
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||||| || ||||| | | |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  45029945 ttgtatattgttgtgttgttgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 45030016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 298883 - 298933
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  298883 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 298933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 22105462 - 22105412
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  22105462 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22105412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 391 - 449
Target Start/End: Complemental strand, 43137359 - 43137301
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgat 449  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||    
T  43137359 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgat 43137301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 8946714 - 8946657
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||||||||  |||| |||||||||||||||||| |||||||| |||||||||||||    
T  8946714 gctattgttatctaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8946657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 22738247 - 22738300
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  22738247 ttgttatttaactaagctgcatgagtcggtctaagttgatcaagatgatgatgt 22738300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 23040257 - 23040310
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23040257 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23040310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 23060566 - 23060513
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23060566 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23060513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 23285918 - 23285865
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  23285918 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 23285865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 38182 - 38235
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  38182 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 38235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 7679638 - 7679589
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||| ||| ||||||||||||||||||    
T  7679638 ttgttatttaactaagctgcatgagtcagtctaagttgattaagatgatg 7679589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 22731302 - 22731355
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| || ||||| |||||||||||||    
T  22731302 ttgttatttaactaagctgcatgagtcggtctaacttgatgaagatgatgatgt 22731355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 23076495 - 23076442
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||| ||| |||||||||||||    
T  23076495 ttgttatttaactaagctgcatgagtcggtctaagtggatgaagatgatgatgt 23076442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 23654454 - 23654507
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  23654454 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 23654507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 20309161 - 20309108
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  20309161 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 20309108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0444 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0444
Description:

Target: scaffold0444; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 13463 - 13392
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  13463 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 13392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0254 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 20818 - 20747
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20818 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 22957 - 22886
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  22957 ttgtatactggtgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0134 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 37892 - 37821
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  37892 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 37821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 48; Significance: 3e-18; HSPs: 5)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 136751 - 136680
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  136751 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 136680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 139220 - 139149
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  139220 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 139149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 144158 - 144087
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  144158 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 144087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 134282 - 134211
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| | |||||||||||||||||    
T  134282 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctatgttgattaagatgatga 134211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 141689 - 141618
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||| |||||||||||| |||||||||||||||||||    
T  141689 ttgtatactgttgtgttgctgttgttatttaactaagctacatgagtcggtctaagttgattaagatgatga 141618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 48; Significance: 3e-18; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 447
Target Start/End: Original strand, 17531 - 17598
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    |||||||||| ||||| |||||||||| ||||| |||||||||||||||||| |||||||||||||||    
T  17531 ttgtatactgctgtgttgctattgttatttaactaagctgcatgagtcggtctaagttgattaagatg 17598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 44525 - 44454
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  44525 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 44454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 94482 - 94411
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  94482 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 94411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 119928 - 119875
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  119928 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 119875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 100427 - 100378
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  100427 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 100378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 158541 - 158612
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  158541 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 158612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 451
Target Start/End: Original strand, 340016 - 340065
Alignment:
Q  402 tgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||||| |||||||||||||||||| |||||||  ||||||||||    
T  340016 tgttatttaactaagctgcatgagtcggtctaagttgacgaagatgatga 340065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 48; Significance: 3e-18; HSPs: 3)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 85671 - 85742
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||| ||| |||||||||||||||    
T  85671 ttgtatactgttgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagatgattaagatgatga 85742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 447
Target Start/End: Complemental strand, 501155 - 501088
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    ||||||| || ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||    
T  501155 ttgtatattgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 501088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 160738 - 160688
Alignment:
Q  400 attgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    ||||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  160738 attgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 160688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 456392 - 456321
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  456392 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 456321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 11972567 - 11972496
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  11972567 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 11972496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 13869417 - 13869346
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||||||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  13869417 ttgtatactactgtgtcgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 13869346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 14949213 - 14949284
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  14949213 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 14949284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 15376804 - 15376875
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  15376804 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 15376875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 16213755 - 16213684
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  16213755 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16213684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 16232591 - 16232520
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  16232591 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16232520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 16410130 - 16410059
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  16410130 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16410059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 383 - 454
Target Start/End: Complemental strand, 18430780 - 18430709
Alignment:
Q  383 tatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  18430780 tatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 18430709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 18640343 - 18640272
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  18640343 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18640272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 20385214 - 20385285
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20385214 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20385285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 21189686 - 21189757
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  21189686 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 21189757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 24702309 - 24702238
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  24702309 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24702238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 24704759 - 24704688
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  24704759 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24704688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 32125562 - 32125491
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  32125562 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 32125491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 41522988 - 41522917
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  41522988 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 41522917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 41525450 - 41525379
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  41525450 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 41525379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 44116580 - 44116509
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  44116580 ttgtatactgctgtgttgctgttgttatttaaccaagctgcatgagtcggtctaagttgattaagatgatga 44116509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 380 - 450
Target Start/End: Original strand, 11393378 - 11393448
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||||    
T  11393378 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatg 11393448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 3386404 - 3386333
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  3386404 ttgtatactattgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 3386333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 447
Target Start/End: Complemental strand, 24275242 - 24275175
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||    
T  24275242 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatg 24275175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 27216931 - 27216860
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||| |||| |||||||||||||||||||    
T  27216931 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagttggtctaagttgattaagatgatga 27216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 67798 - 67745
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  67798 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 67745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 47831860 - 47831807
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  47831860 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 47831807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 17062005 - 17062077
Alignment:
Q  380 ttgtatactgatgtgtcgct-attgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| || || ||| ||||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  17062005 ttgtatactgctgagttgctgattgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 17062077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 18456476 - 18456530
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  18456476 gctatcgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18456530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 20110606 - 20110556
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  20110606 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 20110556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 9509242 - 9509189
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  9509242 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 9509189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 12698884 - 12698831
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  12698884 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 12698831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 38227538 - 38227481
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| |||||||||||||||||| |||| ||| |||||||||||||    
T  38227538 gctattgttatttaactaagctgcatgagtcggtctaagtagatgaagatgatgatgt 38227481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 383 - 447
Target Start/End: Original strand, 38898471 - 38898535
Alignment:
Q  383 tatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    ||||||| ||||||| | |||||| ||||| |||||||||||||||||  |||||||||||||||    
T  38898471 tatactgctgtgtcgttgttgttatttaactaagctgcatgagtcggtttaagttgattaagatg 38898535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Complemental strand, 48273452 - 48273392
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  48273452 tgtgttgctgttgttatttaactaagctgcataagtcggtctaagttgattaagatgatga 48273392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 3564432 - 3564482
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||    
T  3564432 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatga 3564482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 13831423 - 13831373
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||||||||||||| || ||||||||||||||||    
T  13831423 ttgttatttaactaagctgcatgagtcggtctaaattgattaagatgatga 13831373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 11996095 - 11996148
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||||| ||| |||||||||||||| |||||| | |||||||||||||    
T  11996095 ttgttaattaactaagatgcatgagtcggtctaagttgttgaagatgatgatgt 11996148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 16386316 - 16386369
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  16386316 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 16386369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 22072966 - 22072913
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||| ||| ||| ||||||||||||||||||||||    
T  22072966 ttgttatttaactaagctgcatgggtcagtctaagttgattaagatgatgatgt 22072913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 28505366 - 28505419
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| |||| |||||||||||||    
T  28505366 ttgttatttaactaagctgcatgagtcggtctaagatgatgaagatgatgatgt 28505419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 34200839 - 34200786
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  34200839 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 34200786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 18154905 - 18154956
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||| ||||| |||||||||||||||||| |||| ||| |||||||    
T  18154905 gctattgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatga 18154956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 2280187 - 2280238
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||| |||||||||||||||||| |||||||  |||||||||||||    
T  2280187 ttgtttattaactaagctgcatgagtcggtctaagttga--aagatgatgatgt 2280238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 811199 - 811248
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  811199 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 811248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 15754955 - 15755008
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||| ||| |||||| | |||||||||||||    
T  15754955 ttgttatttaactaagctgcatgagtcagtctaagttgttgaagatgatgatgt 15755008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 16495455 - 16495402
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  16495455 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 16495402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 18005699 - 18005650
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  18005699 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 18005650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 44014231 - 44014182
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  44014231 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 44014182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 14932799 - 14932851
Alignment:
Q  398 ctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    ||||||||| ||||| |||  ||||||||| ||| ||||||||||||||||||    
T  14932799 ctattgttatttaactaagtcgcatgagtcagtctaagttgattaagatgatg 14932851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 15356234 - 15356286
Alignment:
Q  398 ctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    ||||||||| ||||| |||  ||||||||| ||| ||||||||||||||||||    
T  15356234 ctattgttatttaactaagtcgcatgagtcagtctaagttgattaagatgatg 15356286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 15360348 - 15360400
Alignment:
Q  398 ctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    ||||||||| ||||| |||  ||||||||| ||| ||||||||||||||||||    
T  15360348 ctattgttatttaactaagtcgcatgagtcagtctaagttgattaagatgatg 15360400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 3e-18; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 2291271 - 2291342
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  2291271 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 2291342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 12742388 - 12742317
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  12742388 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 12742317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 18334683 - 18334754
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  18334683 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 18334754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 19005117 - 19005046
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  19005117 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 19005046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 19859010 - 19859081
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  19859010 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 19859081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 22782298 - 22782227
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  22782298 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 22782227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 24422618 - 24422547
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  24422618 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 24422547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 33861865 - 33861794
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  33861865 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 33861794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 33864349 - 33864278
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  33864349 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 33864278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 30676801 - 30676874
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||| |||||    
T  30676801 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgatg 30676874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 16448618 - 16448686
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||| ||||||||| |||||| ||||| |||||||||||||||||  ||||||||||||||||    
T  16448618 ttgtatactgctgtgtcgctgttgttatttaactaagctgcatgagtcggtttaagttgattaagatga 16448686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 1541002 - 1541073
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||| || |||||||||||||||||||    
T  1541002 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcgatctaagttgattaagatgatga 1541073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 8055100 - 8055029
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  8055100 ttgtatacttttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 8055029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 20556983 - 20557054
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||| |||| |||||||||||||||||||    
T  20556983 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagttggtctaagttgattaagatgatga 20557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 25656700 - 25656629
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| | ||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  25656700 ttgtatactgctatgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 25656629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 25754880 - 25754809
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  25754880 ttgtatactactgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 25754809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 26924731 - 26924802
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  26924731 ttgtatactattgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 26924802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 17287864 - 17287917
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  17287864 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 17287917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 25714470 - 25714417
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  25714470 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 25714417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 27333286 - 27333339
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  27333286 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 27333339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 27394026 - 27394079
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  27394026 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 27394079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 34963444 - 34963371
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||| ||||| ||| |||||| ||||| ||| |||||||||||||| ||||||||||||||| |||||    
T  34963444 ttgtatactgttgtgttgctgttgttatttaactaagttgcatgagtcggtctaagttgattaagatgttgatg 34963371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 1595620 - 1595549
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| | ||| ||| |||||| ||||| |||||||||||||| ||| |||||||||||||||||||    
T  1595620 ttgtatactgttatgttgctgttgttatttaactaagctgcatgagtcagtctaagttgattaagatgatga 1595549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 3852108 - 3852179
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| | ||| |||||||||||||||||| |||||||||||||||||||    
T  3852108 ttgtatactattgtgttgctgttgttattaaactaagctgcatgagtcggtctaagttgattaagatgatga 3852179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 20076753 - 20076700
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  20076753 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 20076700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 414 - 457
Target Start/End: Complemental strand, 19008842 - 19008799
Alignment:
Q  414 aagctgcatgagtcggtccaagttgattaagatgatgatgtcca 457  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  19008842 aagctgcatgagttggtccaagttgattaagatgatgaagtcca 19008799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 25688573 - 25688502
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| | ||| ||| |||||| ||||| ||||||||||||||| || |||||||||||||| ||||    
T  25688573 ttgtatactgttatgttgctgttgttatttaactaagctgcatgagtcgatctaagttgattaagataatga 25688502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 391 - 453
Target Start/End: Original strand, 18409885 - 18409947
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    ||||| ||| |||||| |||||  ||||||||||||||||| |||||||| ||||||||||||    
T  18409885 tgtgttgctgttgttatttaactgagctgcatgagtcggtctaagttgatgaagatgatgatg 18409947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 454
Target Start/End: Original strand, 22080800 - 22080846
Alignment:
Q  408 ttaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||||||||||||||| ||| ||||||||||||||||||    
T  22080800 ttaactaagctgcatgagtcggtctaagatgattaagatgatgatgt 22080846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 408 - 454
Target Start/End: Original strand, 25629430 - 25629476
Alignment:
Q  408 ttaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  25629430 ttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 25629476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 16496297 - 16496244
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  16496297 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 16496244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 19303608 - 19303661
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| |||| |||||||||||||    
T  19303608 ttgttatttaactaagctgcatgagtcggtctaagatgatgaagatgatgatgt 19303661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 20638351 - 20638404
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||||||||||||| |||| |||||||| |||||||||||||    
T  20638351 ttgttatttaactaagctgcatgagttggtctaagttgatgaagatgatgatgt 20638404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 22780295 - 22780348
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  22780295 ttgttatttaactaagctgcatgagtcagtctaagttgatgaagatgatgatgt 22780348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 29060593 - 29060540
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| |||| |||||||||||||    
T  29060593 ttgttatttaactaagctgcatgagtcggtctaagctgatgaagatgatgatgt 29060540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 35245639 - 35245586
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||||| |||||||||||||||||| ||| || | |||||||||||||    
T  35245639 ttgttaattaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 35245586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 18821891 - 18821942
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtc 431  Q
    |||||||||| ||||| ||| |||||| ||||| ||||||||||||||||||    
T  18821891 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtc 18821942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 452
Target Start/End: Original strand, 19848059 - 19848114
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||||||| ||||| ||| |||||||||| ||| ||||||||||||||| ||||    
T  19848059 gctattgttatttaactaagttgcatgagtcagtctaagttgattaagatgttgat 19848114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 8227582 - 8227632
Alignment:
Q  404 ttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||| |||| ||||||||||||||||||||||||| | |||||| ||||||    
T  8227582 ttaactaactaagctgcatgagtcggtccaagttgttgaagatgttgatgt 8227632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 439
Target Start/End: Complemental strand, 19668424 - 19668386
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttga 439  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  19668424 ttgttaattaactaagctgcatgagtcggtctaagttga 19668386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 20109191 - 20109140
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||| |||||||||||||||||| |||||||  |||||||||||||    
T  20109191 ttgtttattaactaagctgcatgagtcggtctaagttga--aagatgatgatgt 20109140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 28496538 - 28496592
Alignment:
Q  400 attgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||||| ||||| |||||||||||||||||| |||||  | |||||||||||||    
T  28496538 attgttatttaactaagctgcatgagtcggtctaagtttttgaagatgatgatgt 28496592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 400 - 454
Target Start/End: Original strand, 29808949 - 29809003
Alignment:
Q  400 attgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||||| ||||| |||||||||||||||||| |||||  | |||||||||||||    
T  29808949 attgttatttaactaagctgcatgagtcggtctaagtttttgaagatgatgatgt 29809003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 1561356 - 1561303
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||| ||| |||||| | |||||||||||||    
T  1561356 ttgttatttaactaagctgcatgagtcagtctaagttgttgaagatgatgatgt 1561303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 16920698 - 16920751
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  16920698 ttgttatttaactaagctgcatgagtcggtcaaagatgttgaagatgatgatgt 16920751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 18907164 - 18907111
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| ||||||||||||||  | |||| ||||||||||||||    
T  18907164 gctattgttatttaactaagctgcatgagtctatacaagatgattaagatgatg 18907111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 20361028 - 20361081
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||||||||||||||| || |||||||| || ||||||||||    
T  20361028 ttgttatttaactaagctgcatgagtcgatctaagttgatgaaaatgatgatgt 20361081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 454
Target Start/End: Complemental strand, 20593846 - 20593773
Alignment:
Q  382 gtatactg-atgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||| |||||| ||| || ||| |||||  |||||||||| |||||| |||||||| |||||||||||||    
T  20593846 gtatactgcatgtgttgctgtttttatttaactgagctgcatgattcggtctaagttgatgaagatgatgatgt 20593773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 22432302 - 22432249
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||||||||| ||| |||||||||||||  ||| |||| |||||||||    
T  22432302 gctattgttaattaaccaagttgcatgagtcggtataagatgatcaagatgatg 22432249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 22438852 - 22438799
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||||||||| ||| |||||||||||||  ||| |||| |||||||||    
T  22438852 gctattgttaattaaccaagttgcatgagtcggtataagatgatcaagatgatg 22438799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0454 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0454
Description:

Target: scaffold0454; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 380 - 452
Target Start/End: Complemental strand, 10844 - 10772
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  10844 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 10772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0819 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0819
Description:

Target: scaffold0819; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 4285 - 4214
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| | |||| ||||| ||| |||||||||||||| |||||||||||||||||||    
T  4285 ttgtatactgctgtgtcgctgtcgttatttaactaagttgcatgagtcggtctaagttgattaagatgatga 4214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0716 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 4765 - 4694
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||| ||||||||    
T  4765 ttgtatactgctgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaggatgatga 4694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 2220 - 2291
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| |||||| ||||| |||||||| ||||||||| ||||||||||| |||||||    
T  2220 ttgtatactgttgtgtcgctgttgttatttaactaagctgcaagagtcggtctaagttgattaaaatgatga 2291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0230 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0230
Description:

Target: scaffold0230; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 14018 - 13947
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||| | |||||||||||||||||| |||||||||||||||||||    
T  14018 ttgtatactgttgtgttgctgttgttatttatctaagctgcatgagtcggtctaagttgattaagatgatga 13947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0142 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0142
Description:

Target: scaffold0142; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 16855 - 16784
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  16855 ttgtatactactgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatga 16784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 44; Significance: 7e-16; HSPs: 4)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 33014 - 33077
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  33014 tgtgttgctgttgttaattaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 33077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 391 - 454
Target Start/End: Complemental strand, 45991 - 45928
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||    
T  45991 tgtgttgctgttgttaattaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 45928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 16166 - 16113
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  16166 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 16113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 392 - 454
Target Start/End: Original strand, 17388 - 17450
Alignment:
Q  392 gtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||| ||| |||||| ||||| ||||| |||||||||||| |||||||| |||||||||||||    
T  17388 gtgttgctgttgttatttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 17450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 40471 - 40400
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||| ||||||||| |||||||||||||||||||    
T  40471 ttgtatactgttgtgttgctgttgttatttaactaagctgcacgagtcggtctaagttgattaagatgatga 40400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 380 - 451
Target Start/End: Original strand, 161181 - 161252
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||||||| ||| || ||||| |||||||||||||||||| |||||| ||||||||||||    
T  161181 ttgtatactgctgtgtcgctgttgatatttaactaagctgcatgagtcggtctaagttggttaagatgatga 161252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0639 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0639
Description:

Target: scaffold0639; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 8536 - 8479
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  8536 gctattgttatttaaccaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 1102 - 1155
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  1102 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 1155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0363 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0363
Description:

Target: scaffold0363; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 383 - 452
Target Start/End: Complemental strand, 9310 - 9241
Alignment:
Q  383 tatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    ||||||| ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||| ||||    
T  9310 tatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatgttgat 9241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 6664 - 6611
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6664 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 14044 - 13991
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  14044 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 13991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 6191 - 6244
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  6191 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 6244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 15845 - 15898
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||||||||||||    
T  15845 ttgttatttaactaagctgcatgagtcggtctaagttgattaagatgatgatgt 15898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 178951 - 178898
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| |||||||||||||||||| |||| ||| |||||||||    
T  178951 gctattgttatttaaccaagctgcatgagtcggtctaagtcgatcaagatgatg 178898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 380 - 448
Target Start/End: Complemental strand, 4368 - 4300
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    |||||||||  ||||| ||| |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  4368 ttgtatactactgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttgattaagatga 4300  T

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Target: scaffold1439 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1439
Description:

Target: scaffold1439; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 177 - 106
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| ||||||||| |||||||| |||||||||||||||||||    
T  177 ttgtatactattgtgttgctgttgttatttaactaagctgcataagtcggtctaagttgattaagatgatga 106  T

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Target: scaffold0037 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 82143 - 82072
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||  ||||| ||| |||||| ||||| ||||| |||||||||||| |||||||||||||||||||    
T  82143 ttgtatactactgtgttgctgttgttatttaactaagcttcatgagtcggtctaagttgattaagatgatga 82072  T

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Target: scaffold0106 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 3)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 397 - 451
Target Start/End: Original strand, 15302 - 15356
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||||||| ||||| |||||||||||||||||| | |||||||||||||||||    
T  15302 gctattgttatttaactaagctgcatgagtcggtctacgttgattaagatgatga 15356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 1342 - 1289
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  1342 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 7319 - 7266
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  7319 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 7266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0647 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 6192 - 6245
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  6192 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 6245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 3218 - 3271
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  3218 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 3271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Original strand, 12340 - 12413
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||| ||| ||||| ||| |||||| ||||| ||||||||| |||||||| ||||||||||||||| |||||    
T  12340 ttgtattctgctgtgttgctgttgttatttaactaagctgcataagtcggtctaagttgattaagatgttgatg 12413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0490 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 393 - 454
Target Start/End: Complemental strand, 2013 - 1952
Alignment:
Q  393 tgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||||| |||||||||||| |||||||||||||||||| ||| || | |||||||||||||    
T  2013 tgtcgctgttgttaattaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 23896 - 23843
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||||||| ||||| |||||||||||||||||| |||||||| |||||||||    
T  23896 gctattgttatttaaccaagctgcatgagtcggtctaagttgatcaagatgatg 23843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 38; Significance: 0.000000000003; HSPs: 4)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 28467 - 28414
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  28467 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 28414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 2050 - 1997
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  2050 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 1997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 4605 - 4552
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  4605 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 4552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 11345 - 11292
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  11345 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 11292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 380 - 453
Target Start/End: Complemental strand, 11359 - 11286
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||||||| ||||| ||| |||||| ||||| ||| |||||||||||||| || |||||||||||| |||||    
T  11359 ttgtatactgctgtgttgctgttgttatttaactaagttgcatgagtcggtctaatttgattaagatgttgatg 11286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 121819 - 121766
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  121819 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 121766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 1904 - 1851
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  1904 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 1851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 51966 - 51913
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  51966 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 51913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 168046 - 168099
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  168046 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 168099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0908 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 3254 - 3306
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||||    
T  3254 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 3306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0149 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0149
Description:

Target: scaffold0149; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 451
Target Start/End: Complemental strand, 30003 - 29931
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagtt-gattaagatgatga 451  Q
    |||||||||| ||||| ||| |||||| ||||| |||||||||||||||||| |||||  |||||||||||||    
T  30003 ttgtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtctaagttcaattaagatgatga 29931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 398 - 450
Target Start/End: Complemental strand, 36506 - 36454
Alignment:
Q  398 ctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    ||||||||| ||||| |||||||||||||||||| |||||||| |||||||||    
T  36506 ctattgttatttaaccaagctgcatgagtcggtctaagttgatcaagatgatg 36454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 391 - 451
Target Start/End: Original strand, 44765 - 44825
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| ||| |||||| ||||| |||||||||||||| ||| |||||||||||||||||||    
T  44765 tgtgttgctgttgttatttaactaagctgcatgagtcagtctaagttgattaagatgatga 44825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 447
Target Start/End: Original strand, 26133 - 26179
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatg 447  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||    
T  26133 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatg 26179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 402 - 454
Target Start/End: Original strand, 8598 - 8650
Alignment:
Q  402 tgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||||| |||||||||||||||||| |||||||| |||||||||||||    
T  8598 tgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatgt 8650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0101 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 380 - 448
Target Start/End: Original strand, 1372 - 1440
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatga 448  Q
    ||||||||| ||||||   | |||||| ||||| |||||||||||||||||| ||||||||||||||||    
T  1372 ttgtatactcatgtgttattgttgttatttaaccaagctgcatgagtcggtctaagttgattaagatga 1440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 401 - 453
Target Start/End: Original strand, 17285 - 17337
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatg 453  Q
    |||||| ||||| |||||||||||||||||| |||||||| ||||||||||||    
T  17285 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagatgatgatg 17337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 408 - 451
Target Start/End: Complemental strand, 12107 - 12064
Alignment:
Q  408 ttaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    ||||| |||||||||||||||||| |||||||||||||||||||    
T  12107 ttaactaagctgcatgagtcggtctaagttgattaagatgatga 12064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 391 - 454
Target Start/End: Original strand, 16658 - 16721
Alignment:
Q  391 tgtgtcgctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| ||| |||||| ||||| |||||||||||||||||| || ||||| |||||||||||||    
T  16658 tgtgttgctgttgttatttaactaagctgcatgagtcggtctaaattgatgaagatgatgatgt 16721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000004; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 380 - 431
Target Start/End: Original strand, 20469 - 20520
Alignment:
Q  380 ttgtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtc 431  Q
    |||||||||||||||| ||| |||||| ||||| ||||||||||||||||||    
T  20469 ttgtatactgatgtgttgctgttgttatttaactaagctgcatgagtcggtc 20520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 128804 - 128751
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||| ||||||||| |||| || |||||||||||||||||||    
T  128804 ttgttatttaactaagttgcatgagttggtctaatttgattaagatgatgatgt 128751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 401 - 451
Target Start/End: Complemental strand, 15714 - 15664
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| |||||||| ||||||||| |||||||||||||||||||    
T  15714 ttgttatttaactaagctgcacgagtcggtctaagttgattaagatgatga 15664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 1116 - 1169
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  1116 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 1169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 1135 - 1086
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| ||||||||||||| ||||    
T  1135 ttgttatttaactaagctgcatgagtcggtctaagttgattaagaagatg 1086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 6588 - 6535
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||||||    
T  6588 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatgatgt 6535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 10491 - 10544
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||||| | |||||||||||||||| |||||| | |||||||||||||    
T  10491 ttgttaattaactatgctgcatgagtcggtctaagttgttgaagatgatgatgt 10544  T

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Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 4765 - 4712
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  4765 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 4712  T

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Target: scaffold0292 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 396 - 343
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||| ||| |||||||||||||    
T  396 ttgttatttaactaagctgcatgagtcggtctaagtcgataaagatgatgatgt 343  T

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Target: scaffold0292; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 403 - 454
Target Start/End: Complemental strand, 3521 - 3470
Alignment:
Q  403 gttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||| ||||| ||||| |||||||||||| |||||||| |||||||||||||    
T  3521 gttatttaactaagctacatgagtcggtctaagttgatgaagatgatgatgt 3470  T

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Target: scaffold0193 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 13264 - 13211
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||| ||| |||||||| |||||||||||||    
T  13264 ttgttatttaactaagctgcatgagtcagtctaagttgatgaagatgatgatgt 13211  T

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Target: scaffold0113 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 32120 - 32067
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | |||||||||||||    
T  32120 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagatgatgatgt 32067  T

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Target: scaffold0080 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 39970 - 39913
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||  ||||||||||||| |||| |||||||| |||||||||||||    
T  39970 gctattgttatttaattaagctgcatgagttggtctaagttgatgaagatgatgatgt 39913  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 25953 - 25896
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| ||||| |||||||||||| |||||||| ||||| |||||||    
T  25953 gctattgttatttaactaagcttcatgagtcggtctaagttgatgaagataatgatgt 25896  T

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Target: scaffold0026; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 397 - 454
Target Start/End: Complemental strand, 39915 - 39858
Alignment:
Q  397 gctattgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||||||| ||||| ||||| ||||||| |||| |||||||| |||||||||||||    
T  39915 gctattgttatttaactaagcttcatgagttggtctaagttgatgaagatgatgatgt 39858  T

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Target: scaffold0141 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Complemental strand, 39530 - 39479
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||| ||||||    
T  39530 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagacgatgat 39479  T

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Target: scaffold0049 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 401 - 452
Target Start/End: Original strand, 75282 - 75333
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgat 452  Q
    |||||| ||||| |||||||||||||||||| |||||||| |||| ||||||    
T  75282 ttgttatttaactaagctgcatgagtcggtctaagttgatgaagacgatgat 75333  T

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Target: scaffold0598 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 404 - 454
Target Start/End: Original strand, 1120 - 1170
Alignment:
Q  404 ttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||||||| |||||||||||||||||| ||| || | |||||||||||||    
T  1120 ttaattaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1170  T

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Target: scaffold0074 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 451
Target Start/End: Original strand, 38770 - 38820
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatga 451  Q
    |||||| ||||| ||| ||||||||| |||| |||||||||||||||||||    
T  38770 ttgttatttaactaaggtgcatgagtaggtctaagttgattaagatgatga 38820  T

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Target: scaffold0034 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 32589 - 32538
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    ||||| |||||| |||||||||||||||||| |||||||  |||||||||||||    
T  32589 ttgtttattaactaagctgcatgagtcggtctaagttga--aagatgatgatgt 32538  T

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Target: scaffold0503 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 382 - 431
Target Start/End: Complemental strand, 12035 - 11986
Alignment:
Q  382 gtatactgatgtgtcgctattgttaattaacaaagctgcatgagtcggtc 431  Q
    |||||||| ||||| ||| |||||| ||||| ||||||||||||||||||    
T  12035 gtatactgttgtgttgctgttgttatttaactaagctgcatgagtcggtc 11986  T

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Target: scaffold0427 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 13550 - 13497
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| |||||| | ||| |||||||||    
T  13550 ttgttatttaactaagctgcatgagtcggtctaagttgttgaagttgatgatgt 13497  T

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Target: scaffold0403 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0403
Description:

Target: scaffold0403; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 4902 - 4849
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| || ||||||||||||||| |||||| | |||||||||||||    
T  4902 ttgttatttaactaatctgcatgagtcggtctaagttgttgaagatgatgatgt 4849  T

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Target: scaffold0395 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0395
Description:

Target: scaffold0395; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 4901 - 4954
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||| ||||||||| |||| |||||||| |||||||||||||    
T  4901 ttgttatttaactaagttgcatgagttggtctaagttgatgaagatgatgatgt 4954  T

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Target: scaffold0207 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 2713 - 2762
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  2713 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 2762  T

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Target: scaffold0184 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 1137 - 1190
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||||||| ||| || | |||||||||||||    
T  1137 ttgttatttaactaagctgcatgagtcggtctaagatgttgaagatgatgatgt 1190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 326 - 273
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| ||||||||||| |||||| |||||||| ||||| |||||||    
T  326 ttgttatttaactaagctgcatgaatcggtctaagttgatgaagataatgatgt 273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Complemental strand, 34176 - 34123
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||| ||||||||||| |||||| | |||||||||||||    
T  34176 ttgttatttaactaagctgtatgagtcggtctaagttgttgaagatgatgatgt 34123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 45860 - 45909
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  45860 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 45909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0114 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0114
Description:

Target: scaffold0114; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 454
Target Start/End: Original strand, 15531 - 15584
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatgatgt 454  Q
    |||||| ||||| |||||||||||||| ||| |||||| | |||||||||||||    
T  15531 ttgttatttaactaagctgcatgagtcagtctaagttgttgaagatgatgatgt 15584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Complemental strand, 19317 - 19268
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  19317 ttgttatttaactaagctgcatgagtcggtctaagttgatgatgatgatg 19268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 401 - 450
Target Start/End: Original strand, 14765 - 14814
Alignment:
Q  401 ttgttaattaacaaagctgcatgagtcggtccaagttgattaagatgatg 450  Q
    |||||| ||||| |||||||||||||||||| |||||||| | |||||||    
T  14765 ttgttagttaactaagctgcatgagtcggtctaagttgatgatgatgatg 14814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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