View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1396_low_21 (Length: 350)
Name: NF1396_low_21
Description: NF1396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1396_low_21 |
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Alignment Details
Target: chr4 (Bit Score: 154; Significance: 1e-81; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 78 - 255
Target Start/End: Original strand, 47319883 - 47320060
Alignment:
| Q |
78 |
tgaaatataatcctaacatgttttccttcacacaataatgctaacatgttgaagtgcacaatataagttttgttcaagaaaatataagttcgatttttgg |
177 |
Q |
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| T |
47319883 |
tgaaatataatcctaacatgttttccttcacacaataatgctaacatgttgaagtgcacaatataagttttgttcaagaaaatataagtttgatttttgg |
47319982 |
T |
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| Q |
178 |
ataaacaattttttgctaggtcttatttattttttgactaaactctaaattaccagagccattttctcttgagaataa |
255 |
Q |
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| T |
47319983 |
ataaacaattttttgctagactttatttattttttgactaaactttaaattaccagagccgttttctcttgagaataa |
47320060 |
T |
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