View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1396_low_37 (Length: 273)
Name: NF1396_low_37
Description: NF1396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1396_low_37 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 40 - 236
Target Start/End: Original strand, 34839239 - 34839435
Alignment:
| Q |
40 |
acagacaaaacccaaatcaaaatttaaataatcaaatcttcaatctacaccgtccaaaggtttccatccaaccatccacatcacttctcattacaaagcg |
139 |
Q |
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| T |
34839239 |
acagacaaaacccaaatcaaaatttaaataatcaaatcttcaatctacaccgtccaaaggtttccatccaacgatccacatcacttctcattacaaagcg |
34839338 |
T |
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| Q |
140 |
agggaaccaatatatttgtccacactttcactctatctcgctataaaaatcccgctcaaccattttcccatcctaactcgtcactctctcgctctct |
236 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34839339 |
agggaaccaatatatttgtccacactttcactctatctcgctataaaaatcccgctcaaccattttcccatcctaactcgtcactctctcgctctct |
34839435 |
T |
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