View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1396_low_43 (Length: 226)
Name: NF1396_low_43
Description: NF1396
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1396_low_43 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 94; Significance: 5e-46; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 113 - 226
Target Start/End: Original strand, 39793431 - 39793544
Alignment:
| Q |
113 |
ctctccctgcaacaggtttgtttctacttcccacaaaaatgggactgagcacaactaaagatcccatcatacgaagtggtaggttgccaagaaaacccta |
212 |
Q |
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| T |
39793431 |
ctctccctgcaacaggtttgtttctactttccacaaaaatgggactgagcacaactaaagataccatcatacgaagtggtaggttgccaagaaaaaccta |
39793530 |
T |
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| Q |
213 |
cgtttaccgccgct |
226 |
Q |
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| T |
39793531 |
caattaccgccgct |
39793544 |
T |
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