View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13971_low_2 (Length: 551)
Name: NF13971_low_2
Description: NF13971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13971_low_2 |
 |  |
|
Alignment Details
Target: chr5 (Bit Score: 173; Significance: 9e-93; HSPs: 20)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 37523028 - 37522848
Alignment:
| Q |
18 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctagtttaatacaaagatgaaataaaataagaaaatgaaagttaatgaagttaaagt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37523028 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctaatttaatacaaagatgaaataaaataagaaaatgaaagttaatgaagttaaagt |
37522929 |
T |
 |
| Q |
118 |
accagcaatgtcattgagatatgttggggaaagggacaatttaaagaggtcatatcataattctaatcatatactccctcc |
198 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
37522928 |
accagcaatgtcattgagatatgttggggaaagggacaatttaaagagatcatatcataattctaatcatatactccctcc |
37522848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 18 - 194
Target Start/End: Complemental strand, 37563200 - 37563024
Alignment:
| Q |
18 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctagtttaatacaaagatgaaataaaataagaaaatgaaagttaatgaagttaaagt |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37563200 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctaatttaatacaaagatgaaataaaataagaaaatgaaagttaatgaagttaaagt |
37563101 |
T |
 |
| Q |
118 |
accagcaatgtcattgagatatgttggggaaagggacaatttaaagaggtcatatcataattctaatcatatactcc |
194 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| |
|
|
| T |
37563100 |
accagcaatgtcattgagatatgttggggaaagggacaatttaaagagataatatcataattctaatcatatactcc |
37563024 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 23616216 - 23616392
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
23616216 |
tgaattgattacattgaagtcatgttaaaaaagtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgactcttgaactcat |
23616315 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23616316 |
ggagatggggtaaaattggaatagtagcatttattaggttgtttttactatactttttcttacatttgagaccacaa |
23616392 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 23847613 - 23847789
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
23847613 |
tgaattgattacattgaagtcatgttaaaaaagtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgactcttgaactcat |
23847712 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
23847713 |
ggagatggggtaaaattggaatagtagcatttattaggttgtttttactatactttttcttacatttgagaccacaa |
23847789 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 5712955 - 5713132
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||| ||||| ||||||||||| ||||||||||||||| ||| |
|
|
| T |
5712955 |
tgaattgattacattgaaatcatgttaaaaaatgtacaactttctaattttgcccttgtcatgttttagtaataattaataaaagtgacttttgaactca |
5713054 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5713055 |
tggagatagggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
5713132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 10862758 - 10862935
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| ||||||||||||| |||| ||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
10862758 |
tgaattgattacattgaaatcatgataaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
10862857 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| || ||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10862858 |
tggagataggataacattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
10862935 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 18 - 115
Target Start/End: Complemental strand, 37687755 - 37687658
Alignment:
| Q |
18 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctagtttaatacaaagatgaaataaaataagaaaatgaaagttaatgaagttaaa |
115 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
37687755 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctaatttaatacaaagatgaaataaaataagaaaatgaaagttaatgaagttaaa |
37687658 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 449 - 525
Target Start/End: Complemental strand, 37522581 - 37522505
Alignment:
| Q |
449 |
cggagggagtacatataaagccacccattcttctacttgccttcaaacttgcacgtggaactcaaaaatataaaaga |
525 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
37522581 |
cggagggagtacatataaagccacccattcttctacttgccttaaaacttgcacgtggaactcaaaaatataaaaga |
37522505 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 449 - 523
Target Start/End: Complemental strand, 37562728 - 37562654
Alignment:
| Q |
449 |
cggagggagtacatataaagccacccattcttctacttgccttcaaacttgcacgtggaactcaaaaatataaaa |
523 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
37562728 |
cggagggagtacatataaagccacccattcttctacttgccttaaaacttgcacgtggaactcaaaaatataaaa |
37562654 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 10831261 - 10831192
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10831261 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
10831192 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 10833280 - 10833349
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10833280 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
10833349 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 242 - 330
Target Start/End: Original strand, 35467663 - 35467753
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgactt |
330 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| |
|
|
| T |
35467663 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgactt |
35467753 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 35467822 - 35467891
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
35467822 |
gggtaaaattggaatagtagcatttaataggttgcttttactatactttttcttacatttgagaccacaa |
35467891 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 10831726 - 10831645
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
10831726 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatga |
10831645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 10830951 - 10831032
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
10830951 |
tgaattgattacattgaagttatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatga |
10831032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 10832815 - 10832896
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||| ||||||||| ||||| ||||||||||||| |
|
|
| T |
10832815 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgtccttgtcatgttttagtaataattaatga |
10832896 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 18 - 83
Target Start/End: Complemental strand, 37785073 - 37785008
Alignment:
| Q |
18 |
cctccaacacaacaacttttgcacgtaaagatgcaatctcctcctagtttaatacaaagatgaaat |
83 |
Q |
| |
|
|||||||| |||||| ||||| |||||||||||| |||||||||| ||||||| || |||||||| |
|
|
| T |
37785073 |
cctccaacgcaacaatttttgtgcgtaaagatgcattctcctcctaatttaataaaaggatgaaat |
37785008 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 30 - 78
Target Start/End: Complemental strand, 37792745 - 37792697
Alignment:
| Q |
30 |
caacttttgcacgtaaagatgcaatctcctcctagtttaatacaaagat |
78 |
Q |
| |
|
||||||||| ||||| ||||||||||||| |||| |||||||||||||| |
|
|
| T |
37792745 |
caacttttgtacgtagagatgcaatctccccctaatttaatacaaagat |
37792697 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 36836816 - 36836749
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
||||||| ||| ||| || ||||||| |||||| ||||||||||| |||||||| |||||||||||| |
|
|
| T |
36836816 |
gggtaaacttggaattgtggcatttaataggttcattttactatacattttcttatatttgagaccac |
36836749 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 462
Target Start/End: Complemental strand, 5712925 - 5712897
Alignment:
| Q |
434 |
ccctacatttgagaccggagggagtacat |
462 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
5712925 |
ccctacatttgagaccggagggagtacat |
5712897 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 142; Significance: 3e-74; HSPs: 11)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 15666534 - 15666711
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
15666534 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
15666633 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15666634 |
tggagatagggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
15666711 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 46109245 - 46109068
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
46109245 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
46109146 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
46109145 |
tggagatagggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
46109068 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 52772527 - 52772350
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||| |||||||| ||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
52772527 |
tgaattgattacattgaagtcatgttaaaaaatgtacaacttttcaattttgtccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
52772428 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
52772427 |
tagagatagggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
52772350 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 247 - 417
Target Start/End: Original strand, 52606008 - 52606179
Alignment:
| Q |
247 |
tgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcatggaga |
345 |
Q |
| |
|
|||||||||||||| |||||||||||||||||| ||| ||||||||||||||||| ||||| ||||||||||||||||| ||| ||||| ||||||||| |
|
|
| T |
52606008 |
tgattacattgaagtcatgttaaaaaagtacaattttttaattttgcccttgtcatgttttagtaataattaatgaaagtaactcttgaactcatggaga |
52606107 |
T |
 |
| Q |
346 |
tggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
52606108 |
tggggtaaaattggaatagtagcatttattaggttgtttttactatactttttcttacatttgagaccacaa |
52606179 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 242 - 414
Target Start/End: Complemental strand, 50391006 - 50390832
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| ||| |||||||||||||||||||||| || ||||| ||||||||||| ||||||||||||||| ||| |
|
|
| T |
50391006 |
tgaattgattacattgaaatcatgttaaaaaatgtataactttccaattttgcccttgttatgttttagtaataattaataaaagtgacttttgaactca |
50390907 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50390906 |
tggagatagggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
50390832 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 1717411 - 1717235
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||||||||| |
|
|
| T |
1717411 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaa-gtgacttttgaattca |
1717313 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||| | || ||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
1717312 |
tggaggtaggataacattggaatagtagcatttattaggttgattttactatactttttcttacatttgagaccacaa |
1717235 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 325 - 417
Target Start/End: Complemental strand, 46632629 - 46632537
Alignment:
| Q |
325 |
tgacttttgaattcatggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||| | |||||| |||| |||||||||||||||||||||| |||||||||| ||||| |||||||||| ||||||| |
|
|
| T |
46632629 |
tgacttttgaactcatggaggtagggtaacattggaatagtagcatttattaggttgtttttactatatttttttttacatttgaaaccacaa |
46632537 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 348 - 415
Target Start/End: Complemental strand, 49228292 - 49228225
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
||||||||||| ||| || ||||||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
49228292 |
gggtaaaattggaattgtggcatttaataggttcattttactatactttttcttatatttgagaccac |
49228225 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 415
Target Start/End: Original strand, 13938871 - 13938938
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
||||||| ||| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
13938871 |
gggtaaacttgggatagtggcatttaataggttcattttactatactttttcttatatttgagaccac |
13938938 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 415
Target Start/End: Complemental strand, 34413271 - 34413223
Alignment:
| Q |
367 |
gcatttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
||||||| |||||| |||||||||| ||||||||| |||||||||||| |
|
|
| T |
34413271 |
gcatttaataggttcattttactatattttttcttatatttgagaccac |
34413223 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 367 - 411
Target Start/End: Original strand, 53189571 - 53189615
Alignment:
| Q |
367 |
gcatttattaggttgcttttactatactttttcttacatttgaga |
411 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||| |||||||| |
|
|
| T |
53189571 |
gcatttaataggttcattttactatactttttcttatatttgaga |
53189615 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 141; Significance: 1e-73; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 45110793 - 45110969
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
45110793 |
tgaattgattacattgaagtcatgttaaaaaagtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgactcttgaactcat |
45110892 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45110893 |
ggagatggggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
45110969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 262 - 417
Target Start/End: Complemental strand, 29713019 - 29712863
Alignment:
| Q |
262 |
catgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcatggagatggggtaaaattgaa |
360 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||| | |
|
|
| T |
29713019 |
catgttaaaaaagtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactcatggagatgggataaaattgga |
29712920 |
T |
 |
| Q |
361 |
atagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29712919 |
atagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
29712863 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 47879955 - 47880132
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
47879955 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaatcttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
47880054 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
47880055 |
tggagataaggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
47880132 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 250 - 417
Target Start/End: Original strand, 48384864 - 48385033
Alignment:
| Q |
250 |
ttacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcatggagatg |
347 |
Q |
| |
|
||||||||||| |||| ||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
48384864 |
ttacattgaagtcatgataaaaaatgtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactcatggagata |
48384963 |
T |
 |
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48384964 |
gggtaacattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
48385033 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 34593121 - 34592944
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaag-tacaactttccaattttgcccttgtcatt-tttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||| ||||||||||||||| |||||||||| ||| |
|
|
| T |
34593121 |
tgaattgattacattgaagtcatgttaaaaaatatacaactttccaattttgcccttgtcatgatttagtaataattaatgaaaatgacttttgacctca |
34593022 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||| | |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34593021 |
tggaggtagggtaacattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
34592944 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 45487188 - 45487266
Alignment:
| Q |
245 |
aatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||||||||||||||| |||||||||||| |||||||||| ||||||||||||| |||| ||||| ||||||||||||| |
|
|
| T |
45487188 |
aatgattacattgaagtcatgttaaaaaatgtacaacttttcaattttgcccttctcatgttttagtaataattaatga |
45487266 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 348 - 415
Target Start/End: Original strand, 28164914 - 28164981
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
|||||||| || ||| || ||||||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
28164914 |
gggtaaaactggaattgtggcatttaataggttcattttactatactttttcttatatttgagaccac |
28164981 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 6568169 - 6568232
Alignment:
| Q |
351 |
taaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
|||||||| ||||||| |||||| |||| || |||| ||||||||| |||||||||||||||| |
|
|
| T |
6568169 |
taaaattggaatagtaacatttaataggatgatttttgtatacttttgcttacatttgagacca |
6568232 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 29670478 - 29670446
Alignment:
| Q |
383 |
ttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
29670478 |
ttttactatactttttcttatatttgagaccac |
29670446 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 383 - 415
Target Start/End: Complemental strand, 29670527 - 29670495
Alignment:
| Q |
383 |
ttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
|||||||||||||||||||| |||||||||||| |
|
|
| T |
29670527 |
ttttactatactttttcttatatttgagaccac |
29670495 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 47880149 - 47880177
Alignment:
| Q |
434 |
ccctacatttgagaccggagggagtacat |
462 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
47880149 |
ccctacatttgagaccggagggagtacat |
47880177 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 133; Significance: 7e-69; HSPs: 5)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 13854040 - 13853864
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcatt-tttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||||||||||||| |||| |||||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
13854040 |
tgaaatgattacatcgaagtcatgttaaaaaagtacaacttttcaattttgcccttgtcatgctttagtaataattaatgaaagtgacttttgaactcat |
13853941 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
13853940 |
agagatggggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatctgagaccacaa |
13853864 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 242 - 394
Target Start/End: Original strand, 5384694 - 5384848
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
5384694 |
tgaattgattacattgaagtcatgttaaaaaatgtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
5384793 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatact |
394 |
Q |
| |
|
| || || || |||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
5384794 |
ttgatattggttaaaattggaatagtagcatttattaggttgcttttactatact |
5384848 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 242 - 353
Target Start/End: Original strand, 1251764 - 1251877
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
1251764 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
1251863 |
T |
 |
| Q |
340 |
tggagatggggtaa |
353 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
1251864 |
tggagatagggtaa |
1251877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 1251934 - 1252003
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1251934 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
1252003 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 360 - 414
Target Start/End: Original strand, 647912 - 647966
Alignment:
| Q |
360 |
aatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
|||||| ||||||| |||||| |||||||||||||||||||| ||||||||||| |
|
|
| T |
647912 |
aatagtggcatttaataggttcattttactatactttttcttatatttgagacca |
647966 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 133; Significance: 7e-69; HSPs: 14)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 38929272 - 38929097
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| |||||||||| ||||||| ||||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
38929272 |
tgaattgattacattgaagtcatgttaaaaaagtacaacttttcaattttgcc-ttgtcatgttttagtaataattaatgaaagtgactcttgaactcat |
38929174 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
38929173 |
ggagatggggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
38929097 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 9614743 - 9614566
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
9614743 |
tgaattgattacattgaagtcatgttaaaaaatgtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
9614644 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9614643 |
tggagataggataaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
9614566 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 51562176 - 51561999
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
51562176 |
tgaattgattacattgaagtcatgttaaaaaatgtacaacttttcaattttgcccttgtcatgttttaataataattaatgaaagtgacttttgaactca |
51562077 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
51562076 |
tggagatagggtaaaattggaatagtagcatttattaggttgcttatactatactttttcttacatttgagaccacaa |
51561999 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 247 - 417
Target Start/End: Complemental strand, 3800558 - 3800386
Alignment:
| Q |
247 |
tgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcatggag |
344 |
Q |
| |
|
||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| |||||||| |
|
|
| T |
3800558 |
tgattacattgaaatcatattaaaaaatgtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactcatggag |
3800459 |
T |
 |
| Q |
345 |
atggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|| ||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
3800458 |
atagggtaaaattggaatagtagcatttattaggttgcttttactatattttttcttacatttgagaccacaa |
3800386 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 242 - 353
Target Start/End: Original strand, 23860638 - 23860751
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
23860638 |
tgaattgattacattgaagacatgttaaaaaatgtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
23860737 |
T |
 |
| Q |
340 |
tggagatggggtaa |
353 |
Q |
| |
|
||||||| |||||| |
|
|
| T |
23860738 |
tggagatagggtaa |
23860751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 23860808 - 23860877
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
23860808 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
23860877 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 36834711 - 36834645
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36834711 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
36834645 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 26246219 - 26246150
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
26246219 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagatcacaa |
26246150 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 7860963 - 7861032
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
7860963 |
gggtaaaattggaataatagtatttattaggttgcttttactatactttttcttacatttgagaccacaa |
7861032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 47779043 - 47779112
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
47779043 |
gggtaaaattggaatagtagcatttattaggttatttttactatactttttcttacatttgagaccacaa |
47779112 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 7860722 - 7860803
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
7860722 |
tgaattgattacattgaagtcatgttaaaaaatgtacaacttttcaattttgcccttgtcatgttttagtaataattaatga |
7860803 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 47778828 - 47778909
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||| ||||| ||||||||||||| |
|
|
| T |
47778828 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcctttgtcatgttttagtaataattaatga |
47778909 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 26246435 - 26246353
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaac-tttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||| |||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
26246435 |
tgaattgattacattgaagtcatgttaaaaaatgtacaacttttccaattttgcccttgtcatgttttagtaataattaatga |
26246353 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 36834926 - 36834845
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaag-tacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
36834926 |
tgaattgattacattgaagtcatgttaaaaaatatacaactttccaattttacccttgtcatgttttagtaataattaatga |
36834845 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 4e-67; HSPs: 10)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 242 - 417
Target Start/End: Original strand, 41331810 - 41331987
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||| ||| |
|
|
| T |
41331810 |
tgaattgattacattgaaatcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtggcttttgaactca |
41331909 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41331910 |
tggagatagggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
41331987 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 49615972 - 49615796
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| |||||||| | ||||||| ||||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
49615972 |
tgaattgattacattgaagtcatgttaaaaaagtacaacttttcaattttgtcattgtcatgttttagtaataattaatgaaagtgactcttgaactcat |
49615873 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
49615872 |
ggagatggggtaaaattggaatagtagcatttattaggttgcttttactatattttttcttacatttgagaccacaa |
49615796 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 34022393 - 34022217
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcat |
340 |
Q |
| |
|
|||| |||||||||||||| |||||||||||||||||||||| |||||||||||||||||| ||||| ||||||||||||||||||||| ||||| |||| |
|
|
| T |
34022393 |
tgaattgattacattgaagtcatgttaaaaaagtacaacttttcaattttgcccttgtcatgttttagtaataattaatgaaagtgactcttgaactcat |
34022294 |
T |
 |
| Q |
341 |
ggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
|||||||||||||||||| ||||||| ||||||||||||| |||||||||||||||||||||||||||||| |||| |
|
|
| T |
34022293 |
ggagatggggtaaaattggaatagtaacatttattaggttatttttactatactttttcttacatttgagactacaa |
34022217 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 303 - 411
Target Start/End: Complemental strand, 41994029 - 41993921
Alignment:
| Q |
303 |
ttttactaataattaatgaaagtgacttttgaattcatggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttctta |
402 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||||| || | |||||| |||| |||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
41994029 |
ttttaataataattaatgaaagtgacttttgaactcatgaaggtagggtaacattggaatagtagcatttattaggttgtttttactatactttttctta |
41993930 |
T |
 |
| Q |
403 |
catttgaga |
411 |
Q |
| |
|
||||||||| |
|
|
| T |
41993929 |
catttgaga |
41993921 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 51058103 - 51058172
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51058103 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
51058172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 348 - 417
Target Start/End: Original strand, 43020708 - 43020777
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
43020708 |
gggtaaaattggaatagtagcatttattaggttacttttactatactttttcttacatttgagaccacaa |
43020777 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 51057888 - 51057969
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaag-tacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
51057888 |
tgaattgattacattgaagtcatgttaaaaaatatacaactttccaattttgcccttgtcatgttttagtaataattaatga |
51057969 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 43020493 - 43020574
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||| |||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
43020493 |
tgaattgattacattgaagtcatgttaaaaaatatacaacttttcaattttgcccttgtcatgttttagtaataattaatga |
43020574 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 415
Target Start/End: Original strand, 43424117 - 43424184
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
||||||||||| ||| || |||||| |||||| |||||||||| |||||||||||||||| ||||| |
|
|
| T |
43424117 |
gggtaaaattggaattgtgtcatttaataggttcattttactatattttttcttacatttgataccac |
43424184 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 434 - 462
Target Start/End: Original strand, 41332004 - 41332032
Alignment:
| Q |
434 |
ccctacatttgagaccggagggagtacat |
462 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
41332004 |
ccctacatttgagaccggagggagtacat |
41332032 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 122; Significance: 2e-62; HSPs: 9)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 242 - 417
Target Start/End: Complemental strand, 16848030 - 16847853
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattca |
339 |
Q |
| |
|
|||| |||||||||||||| |||| ||||||| || |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||| ||| |
|
|
| T |
16848030 |
tgaattgattacattgaagtcatgataaaaaatgttcaactttccaattttgcccttgtcatgttttagtaataattaatgaaagtgacttttgaactca |
16847931 |
T |
 |
| Q |
340 |
tggagatggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||| |||||| |||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
16847930 |
tggagatagggtaacattggaatagtagcatttattaggttgtttttactatactttttcttacatttgagaccacaa |
16847853 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 249 - 417
Target Start/End: Complemental strand, 29411151 - 29410982
Alignment:
| Q |
249 |
attacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttgaattcatggagat |
346 |
Q |
| |
|
||||||||||| |||||||||||| |||||||||| ||||||||||||||| || ||||| ||||||||||||||||||| ||||||| |||||||||| |
|
|
| T |
29411151 |
attacattgaaatcatgttaaaaaatgtacaacttttcaattttgcccttgttatgttttagtaataattaatgaaagtga-ttttgaactcatggagat |
29411053 |
T |
 |
| Q |
347 |
ggggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29411052 |
agggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
29410982 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 27594181 - 27594100
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaa-gtacaactttccaattttgcccttgtcat-ttttactaataattaatga |
321 |
Q |
| |
|
|||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||| |
|
|
| T |
27594181 |
tgaattgattacattgaagtcatgttaaaaaatgtacaactttccaattttgcccttgtcatgttttagtaataattaatga |
27594100 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 27592635 - 27592566
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| |||||| ||||||||||| || ||||||||||||||||||| |||||||||||||||| |
|
|
| T |
27592635 |
gggtaaaattggaatagtggcatttattagtttacttttactatactttttctaacatttgagaccacaa |
27592566 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 348 - 414
Target Start/End: Complemental strand, 21356123 - 21356057
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
||||||| ||||||| || ||||||| ||| || |||||||||||||||||||| ||||||||||| |
|
|
| T |
21356123 |
gggtaaatttgaaattgtggcatttaatagatttattttactatactttttcttatatttgagacca |
21356057 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 414
Target Start/End: Complemental strand, 111835 - 111772
Alignment:
| Q |
351 |
taaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
|||||||| ||||||| |||||| |||| || |||| ||||||||| |||||||||||||||| |
|
|
| T |
111835 |
taaaattggaatagtaacatttaataggatgatttttgtatacttttgcttacatttgagacca |
111772 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 415
Target Start/End: Original strand, 1236279 - 1236326
Alignment:
| Q |
368 |
catttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
1236279 |
catttaataggttcattttactatactttttcttatatttgagaccac |
1236326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 348 - 411
Target Start/End: Complemental strand, 15552389 - 15552326
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgaga |
411 |
Q |
| |
|
||||||| ||| ||| || ||||||| |||||| |||||||||||||||||||| |||||||| |
|
|
| T |
15552389 |
gggtaaacttggaattgttgcatttaataggttcattttactatactttttcttatatttgaga |
15552326 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 415
Target Start/End: Original strand, 31498610 - 31498657
Alignment:
| Q |
368 |
catttattaggttgcttttactatactttttcttacatttgagaccac |
415 |
Q |
| |
|
|||||| |||||| |||||||||||||||||||| |||||||||||| |
|
|
| T |
31498610 |
catttaataggttcattttactatactttttcttatatttgagaccac |
31498657 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 70; Significance: 3e-31; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 242 - 334
Target Start/End: Complemental strand, 8740950 - 8740857
Alignment:
| Q |
242 |
tgaaatgattacattgaagacatgttaaaaaagtacaactttccaattttgcccttgtcat-ttttactaataattaatgaaagtgacttttga |
334 |
Q |
| |
|
|||| |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| |
|
|
| T |
8740950 |
tgaattgattacattgaagtcatgttaaaaatgtacaactttccaattttgcccttgtcatattttagtaataattaatgaaagtgacttttga |
8740857 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 348 - 417
Target Start/End: Complemental strand, 8740792 - 8740723
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttcttacatttgagaccacaa |
417 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
8740792 |
gggtaaaattggaatagtagcatttattaggttgcttttactatactttttcttatatttgagaccacaa |
8740723 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 348 - 401
Target Start/End: Original strand, 32742210 - 32742263
Alignment:
| Q |
348 |
gggtaaaattgaaatagtagcatttattaggttgcttttactatactttttctt |
401 |
Q |
| |
|
||||||| |||||||||| ||||||| |||||| ||||||||||||||||||| |
|
|
| T |
32742210 |
gggtaaacttgaaatagtggcatttaataggttcattttactatactttttctt |
32742263 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 351 - 414
Target Start/End: Original strand, 13789226 - 13789289
Alignment:
| Q |
351 |
taaaattgaaatagtagcatttattaggttg-cttttactatactttttcttacatttgagacca |
414 |
Q |
| |
|
|||||||| ||||||| |||||| |||| || |||||| ||||||||| |||||||||||||||| |
|
|
| T |
13789226 |
taaaattggaatagtaacatttaataggatgactttta-tatacttttgcttacatttgagacca |
13789289 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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