View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13974_low_1 (Length: 823)

Name: NF13974_low_1
Description: NF13974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13974_low_1
NF13974_low_1
[»] chr4 (14 HSPs)
chr4 (460-810)||(3987085-3987434)
chr4 (630-808)||(3817676-3817854)
chr4 (630-808)||(3932834-3933012)
chr4 (634-809)||(4218734-4218909)
chr4 (634-809)||(3801677-3801852)
chr4 (604-810)||(4010086-4010292)
chr4 (629-808)||(3810108-3810287)
chr4 (674-808)||(3919654-3919788)
chr4 (551-810)||(4002389-4002645)
chr4 (631-810)||(4025316-4025495)
chr4 (551-810)||(3954202-3954458)
chr4 (629-767)||(3963129-3963267)
chr4 (200-409)||(3987489-3987703)
chr4 (635-748)||(4018860-4018973)
[»] scaffold1360 (1 HSPs)
scaffold1360 (630-767)||(1829-1966)
[»] chr5 (3 HSPs)
chr5 (559-810)||(13398040-13398288)
chr5 (292-345)||(13398582-13398635)
chr5 (102-155)||(13398761-13398814)
[»] chr8 (6 HSPs)
chr8 (636-767)||(7069135-7069266)
chr8 (695-772)||(7036249-7036326)
chr8 (629-765)||(7081692-7081828)
chr8 (625-772)||(7075636-7075783)
chr8 (629-734)||(7098594-7098699)
chr8 (695-772)||(7030540-7030617)


Alignment Details
Target: chr4 (Bit Score: 148; Significance: 1e-77; HSPs: 14)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 148; E-Value: 1e-77
Query Start/End: Original strand, 460 - 810
Target Start/End: Complemental strand, 3987434 - 3987085
Alignment:
Q  460 aaataatgttccattatgggtgttgaacatctcaatacaaattttaaaccaaataagatgttagtagtgccattcatttttacttctttaatttgatgta 559  Q
    |||||||||||||| |||||| |||||| |||||||| ||| ||||||||||||||  |||||||||||||| ||||||||  |||||  ||||          
T  3987434 aaataatgttccatcatgggttttgaacctctcaataaaaaatttaaaccaaataaagtgttagtagtgccactcatttttctttcttcgattt------ 3987341  T
Q  560 taggaatgatgctgagctgattgaagaaattatcaccaaagttgtgttgaagagattgaggaagt---------accaagttaactcaaaaggacttatt 650  Q
     |||||||||||||||||| ||||||||||   |||||| |||||||||| ||| |||| || ||         ||| ||||||||||||||||||||||    
T  3987340 -aggaatgatgctgagctgcttgaagaaat---caccaatgttgtgttgatgaggttgaagatgttgagtaagcacccagttaactcaaaaggacttatt 3987245  T
Q  651 ggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagt 750  Q
    |||||||||||| |||||| |||||| |||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||  ||| |||||||||     
T  3987244 ggaattgacaaatcaattgcacatttaaattcattgttaaagaaagagtcacaaaaggtccgtgtgattggaatttggggtatgcctggcattggcaaga 3987145  T
Q  751 caactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttttt 810  Q
    |||||||||| |||||| | || | ||||||||| |||||||||||||||||||||||||    
T  3987144 caactattgcagaagaaatttttaaccaaaatcgctctgaatatgatggttgttgttttt 3987085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 630 - 808
Target Start/End: Complemental strand, 3817854 - 3817676
Alignment:
Q  630 gttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggg 729  Q
    ||||||||||||| |||| |||||||||||||||||||||   |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  3817854 gttaactcaaaagaacttgttggaattgacaaaccaattgcggatttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggg 3817755  T
Q  730 gtatgggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttt 808  Q
    | ||||| |||||||||||| |||||||||| |||||| |||| |||||||||||||| || |||||||||||||||||    
T  3817754 gcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgttt 3817676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 630 - 808
Target Start/End: Original strand, 3932834 - 3933012
Alignment:
Q  630 gttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggg 729  Q
    ||||| |||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  3932834 gttaaatcaaaaagacttgttggaattgacaaaccaattgcagatttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggg 3932933  T
Q  730 gtatgggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttt 808  Q
    | ||||| |||||||||||| |||||||||| |||||| |||| |||||||||||||| || |||||||||||||||||    
T  3932934 gcatgggcggtattggcaagacaactattgcagaagaaatatttagccaaaatcgttccgattatgatggttgttgttt 3933012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 634 - 809
Target Start/End: Complemental strand, 4218909 - 4218734
Alignment:
Q  634 actcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtat 733  Q
    |||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||    
T  4218909 actcaaaaggacttattggaatggacaaaccaattgcacatttgaattcattgttaaacaaagagtcgggaaaggtccgtgttattggaatttggggtat 4218810  T
Q  734 gggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgtttt 809  Q
    ||| |||||||||||| ||||||||||  ||||||||||   ||||| | ||||||||||||||||||||||||||    
T  4218809 gggcggtattggcaagacaactattgcaaaagaattatttgaccaaatttgttctgaatatgatggttgttgtttt 4218734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 634 - 809
Target Start/End: Complemental strand, 3801852 - 3801677
Alignment:
Q  634 actcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtat 733  Q
    ||||| |||||||||||||||| |||| |||||||| ||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||||||||    
T  3801852 actcagaaggacttattggaatggacagaccaattgcacatttgaattcattgttaaacaaagagtcgggaaaggtccgtgttattggaatttggggtat 3801753  T
Q  734 gggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgtttt 809  Q
    ||| |||||||||||| |||||||||| |||||| |||| | ||||||||| | ||||||||||||||||||||||    
T  3801752 gggcggtattggcaagacaactattgcagaagaaatatttaaccaaaatcgctttgaatatgatggttgttgtttt 3801677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 604 - 810
Target Start/End: Complemental strand, 4010292 - 4010086
Alignment:
Q  604 tgttgaagagattgaggaagtaccaagttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcaga 703  Q
    |||||||||| ||||| ||| ||| |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||| | |||||||||||    
T  4010292 tgttgaagaggttgagtaagcacccagttaactcaaaaggacttattggaattgacaaatcaattgcacatttgaattcattgttacaaaaagagtcaga 4010193  T
Q  704 aaatgtccgtgttattggaatttggggtatgggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgt 803  Q
    ||| ||| |||| |||||||||||||| |||||  ||||||||||| |||||||||| | |||| | || | ||||||| | ||||||||||| ||||||    
T  4010192 aaaggtcagtgtcattggaatttggggcatgggaagtattggcaagacaactattgcaggagaaatttttaaccaaaattgctctgaatatgaaggttgt 4010093  T
Q  804 tgttttt 810  Q
    |||||||    
T  4010092 tgttttt 4010086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 629 - 808
Target Start/End: Complemental strand, 3810287 - 3810108
Alignment:
Q  629 agttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttgg 728  Q
    |||||| ||||||| |||| |||||||||||||| | |||  ||||||||| ||||||||||||||||||||| |||| | || |||||| |||||||||    
T  3810287 agttaaatcaaaagaacttgttggaattgacaaatctatttcacatttgaaatcattgttaaagaaagagtcacaaaaggcccctgttatcggaatttgg 3810188  T
Q  729 ggtatgggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttt 808  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||   ||||| | |||||||||||||||||||||||||    
T  3810187 ggtatgggtggtattggcaagacaactattgcaaaagaattatttgaccaaatttgttctgaatatgatggttgttgttt 3810108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 674 - 808
Target Start/End: Original strand, 3919654 - 3919788
Alignment:
Q  674 tttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagtcaactattgccgaagaattatta 773  Q
    ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||| ||||     
T  3919654 tttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggggcatgggcggtattggcaagacaactattgcagaagaaatattt 3919753  T
Q  774 agccaaaatcgttctgaatatgatggttgttgttt 808  Q
    |||||||||||||| || |||||||||||||||||    
T  3919754 agccaaaatcgttccgattatgatggttgttgttt 3919788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 551 - 810
Target Start/End: Complemental strand, 4002645 - 4002389
Alignment:
Q  551 tttgatgtataggaatgatgctgagctgattgaagaaattatcaccaaagttgtgttgaagagattgaggaagtaccaagttaactcaaaaggacttatt 650  Q
    |||| ||||||||||||||||||||||  |||||||||| ||||   |  ||||||||||||| ||||| ||| |||   ||||  ||||||||||||||    
T  4002645 tttgttgtataggaatgatgctgagctacttgaagaaatcatca---atcttgtgttgaagaggttgagtaagcaccctattaatacaaaaggacttatt 4002549  T
Q  651 ggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagt 750  Q
    ||||||| ||||||| ||| ||||||  | |||||||||    || ||| |||||| |||||||| |||||||||||||||||||| ||||||||||||     
T  4002548 ggaattggcaaaccagttgcacatttagaatcattgttacgtcaacagttagaaaaggtccgtgtcattggaatttggggtatgggaggtattggcaaga 4002449  T
Q  751 caactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttttt 810  Q
    |||||||||| |||||| | || | || || | | ||||||||||| |||| ||||||||    
T  4002448 caactattgctgaagaagtttttaaccgaagttgctctgaatatgaaggtttttgttttt 4002389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 631 - 810
Target Start/End: Complemental strand, 4025495 - 4025316
Alignment:
Q  631 ttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttgggg 730  Q
    ||||| ||||||||||||||||||||| ||||||||| |  |||||  | || ||||||    ||||||||||||| || ||||||||||||||||||||    
T  4025495 ttaacacaaaaggacttattggaattggcaaaccaatggctcatttagaatcgttgttacgtcaagagtcagaaaaggttcgtgttattggaatttgggg 4025396  T
Q  731 tatgggtggtattggcaagtcaactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttttt 810  Q
    |||||| |||||||||||| ||||||||||||||||| | || |  |||||| | ||||||||||| |||||||||||||    
T  4025395 tatgggaggtattggcaagacaactattgccgaagaaatttttaaacaaaattgctctgaatatgaaggttgttgttttt 4025316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 551 - 810
Target Start/End: Original strand, 3954202 - 3954458
Alignment:
Q  551 tttgatgtataggaatgatgctgagctgattgaagaaattatcaccaaagttgtgttgaagagattgaggaagtaccaagttaactcaaaaggacttatt 650  Q
    |||| ||||||||||||||| |||| |  |||||||||| ||||   |  ||||||||||||| ||||| ||||| |   ||||| || |||||  ||||    
T  3954202 tttgttgtataggaatgatgttgagatacttgaagaaatcatca---atcttgtgttgaagaggttgagtaagtatcctattaacacagaaggatatatt 3954298  T
Q  651 ggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagt 750  Q
    ||||||| ||||||| ||| ||||||  | |||||||||    || |||||||||| ||  |||| |||||||||||||||||||| ||||||||||||     
T  3954299 ggaattgccaaaccagttggacatttagaatcattgttacgtcaaaagtcagaaaaggtttgtgtcattggaatttggggtatgggaggtattggcaaga 3954398  T
Q  751 caactattgccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttttt 810  Q
    |||||||||| |||||| | |  | || || | | ||||||||||| |||||||||||||    
T  3954399 caactattgctgaagaagtttataaccgaagttgctctgaatatgaaggttgttgttttt 3954458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 629 - 767
Target Start/End: Original strand, 3963129 - 3963267
Alignment:
Q  629 agttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttgg 728  Q
    ||||| |||||||||||| ||||||||||  |||| || || |||| | || ||||| ||||   ||||||||||| |||| |||||| |||| ||||||    
T  3963129 agttagctcaaaaggactcattggaattggaaaacaaactgcacatctaaagtcattattaagccaagagtcagaagatgttcgtgttgttgggatttgg 3963228  T
Q  729 ggtatgggtggtattggcaagtcaactattgccgaagaa 767  Q
    ||||||||||||||||||||| ||||  |||| ||||||    
T  3963229 ggtatgggtggtattggcaagacaacccttgcagaagaa 3963267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 200 - 409
Target Start/End: Complemental strand, 3987703 - 3987489
Alignment:
Q  200 tagttaatgctacaactttttagtgccgggatttatatgaatcttagtacttcgaggaattagtctccgactctcatttggagatatcaggggttcaccg 299  Q
    |||||||  |||||||||||  | ||||||||| |||||||||| | ||  |||| | ||| |||||  | ||||  ||||||||| || |||||| ||     
T  3987703 tagttaacactacaacttttctgagccgggattaatatgaatctgaatatctcgaaggattggtctctaattctcgattggagata-cacgggttcgcca 3987605  T
Q  300 aaacaaaaatagttcggttgtgattattgtggttttaatttaggcccatatggtcta------taatagtggtttgttggcagattctatagccgtaaca 393  Q
    ||||||||||||||  |||||||||||||| |||||||||||| || || | || ||      ||||| |  ||||||||| ||||||||||||| ||||    
T  3987604 aaacaaaaatagtttagttgtgattattgttgttttaatttagaccaatgtagtatataatattaataataatttgttggcggattctatagccgaaaca 3987505  T
Q  394 tgtatgtcacatcaca 409  Q
    | || |||||||||||    
T  3987504 tataggtcacatcaca 3987489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 635 - 748
Target Start/End: Complemental strand, 4018973 - 4018860
Alignment:
Q  635 ctcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatg 734  Q
    |||||||||||| |||||||||| ||||| ||||| |||| | |  ||||||||||    ||| ||| || |||||||| || |||| |||||||| |||    
T  4018973 ctcaaaaggactcattggaattggcaaacaaattgcacatctaatatcattgttaagcctagactcacaagatgtccgtattgttgggatttggggcatg 4018874  T
Q  735 ggtggtattggcaa 748  Q
    || |||||||||||    
T  4018873 ggcggtattggcaa 4018860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1360 (Bit Score: 94; Significance: 2e-45; HSPs: 1)
Name: scaffold1360
Description:

Target: scaffold1360; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 630 - 767
Target Start/End: Original strand, 1829 - 1966
Alignment:
Q  630 gttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggg 729  Q
    ||||| |||||| ||||| ||||||||||||||||||||| | |||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  1829 gttaaatcaaaaagacttgttggaattgacaaaccaattgcagatttgaattcattgttaaagaaagagtcagaacaggtccgtgttattggaatttggg 1928  T
Q  730 gtatgggtggtattggcaagtcaactattgccgaagaa 767  Q
    | ||||| |||||||||||| |||||||||| ||||||    
T  1929 gcatgggcggtattggcaagacaactattgcagaagaa 1966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 7e-36; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 559 - 810
Target Start/End: Complemental strand, 13398288 - 13398040
Alignment:
Q  559 ataggaatgatgctgagctgattgaagaaattatcaccaaagttgtgttgaagagattgaggaagtaccaagttaactcaaaaggacttattggaattga 658  Q
    |||||||||||||||||||  |||||||||| ||||   |  ||||||||||||| ||||  ||| |||  |||||  ||||||||||||||||||||||    
T  13398288 ataggaatgatgctgagctacttgaagaaatcatca---agcttgtgttgaagaggttgaataagcaccctgttaaaacaaaaggacttattggaattga 13398192  T
Q  659 caaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagtcaactatt 758  Q
     ||| |||||| ||||||  |  |||||||| |  ||||||||||||| || || || ||||| |||||||||||||| |||||||| ||| ||||||||    
T  13398191 gaaagcaattgcacatttagaaccattgttacatcaagagtcagaaaaggttcgcgtaattggtatttggggtatgggaggtattggaaagacaactatt 13398092  T
Q  759 gccgaagaattattaagccaaaatcgttctgaatatgatggttgttgttttt 810  Q
    ||||||||| | || |  |||| | ||||||||||||| || ||||||||||    
T  13398091 gccgaagaaatttttaatcaaatttgttctgaatatgaaggatgttgttttt 13398040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 292 - 345
Target Start/End: Complemental strand, 13398635 - 13398582
Alignment:
Q  292 gttcaccgaaacaaaaatagttcggttgtgattattgtggttttaatttaggcc 345  Q
    |||||||||||||||||| | | | |||||||||||||||||||||||| ||||    
T  13398635 gttcaccgaaacaaaaatggcttgattgtgattattgtggttttaatttgggcc 13398582  T

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Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 102 - 155
Target Start/End: Complemental strand, 13398814 - 13398761
Alignment:
Q  102 gcttaaatagcaaaaagacatgatctttattttctctgtttaactagagtgcat 155  Q
    |||||||||||||||||   | ||||||||||||||| ||| ||||||||||||    
T  13398814 gcttaaatagcaaaaagttgtaatctttattttctctattttactagagtgcat 13398761  T

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Target: chr8 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 636 - 767
Target Start/End: Complemental strand, 7069266 - 7069135
Alignment:
Q  636 tcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttggggtatgg 735  Q
    |||||||||||||||||||||| ||||| ||||  || | |  | ||||||||| |   ||||||  || |||| |||| |||||||||||||||||||     
T  7069266 tcaaaaggacttattggaattggcaaacaaatttcacgtgtagaatcattgttacaagtagagtcgcaagatgttcgtgctattggaatttggggtatga 7069167  T
Q  736 gtggtattggcaagtcaactattgccgaagaa 767  Q
    |||||||||| ||| |||||||||| ||||||    
T  7069166 gtggtattggaaagacaactattgcagaagaa 7069135  T

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Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 695 - 772
Target Start/End: Original strand, 7036249 - 7036326
Alignment:
Q  695 agagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagtcaactattgccgaagaattatt 772  Q
    |||||||||| |||| |||||| |||||||||||||||||  ||||||||| ||  |||||||||| |||||| ||||    
T  7036249 agagtcagaagatgttcgtgttcttggaatttggggtatgcctggtattggtaaaacaactattgctgaagaagtatt 7036326  T

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Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 629 - 765
Target Start/End: Complemental strand, 7081828 - 7081692
Alignment:
Q  629 agttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttgg 728  Q
    |||||| ||||||||| ||||||||||||| |||| |||   | || || | ||||||||| |   ||||||| || |||| |||| |||||||||||||    
T  7081828 agttaattcaaaaggagttattggaattgaaaaacaaatatcatatgtggaatcattgttacaagtagagtcacaagatgttcgtgctattggaatttgg 7081729  T
Q  729 ggtatgggtggtattggcaagtcaactattgccgaag 765  Q
    || ||| |||||||||| ||| ||| ||||| |||||    
T  7081728 gggatgagtggtattggaaagacaattattgtcgaag 7081692  T

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Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 625 - 772
Target Start/End: Complemental strand, 7075783 - 7075636
Alignment:
Q  625 accaagttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaat 724  Q
    |||||| ||| |||||||||||||| |||||||| |||| ||||  || | |  | ||| ||||| |   |||||| ||| ||||||||||| |||||||    
T  7075783 accaaggtaagtcaaaaggacttataggaattgagaaacaaatttcacctatagaatcaatgttacatttagagtcggaagatgtccgtgttcttggaat 7075684  T
Q  725 ttggggtatgggtggtattggcaagtcaactattgccgaagaattatt 772  Q
    ||||||||||   |||||||| ||  |||||||||| |||||| ||||    
T  7075683 ttggggtatgccaggtattggtaaaacaactattgctgaagaagtatt 7075636  T

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Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 629 - 734
Target Start/End: Complemental strand, 7098699 - 7098594
Alignment:
Q  629 agttaactcaaaaggacttattggaattgacaaaccaattgtacatttgaattcattgttaaagaaagagtcagaaaatgtccgtgttattggaatttgg 728  Q
    |||||| ||||||||||||  ||||||||| |||| ||||| |||| |  | ||||||||| |   ||||||| || |||| |||| |||||||||||||    
T  7098699 agttaattcaaaaggacttgatggaattgaaaaacaaattgcacatgtagaatcattgttacaagtagagtcacaagatgttcgtgctattggaatttgg 7098600  T
Q  729 ggtatg 734  Q
    ||||||    
T  7098599 ggtatg 7098594  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 695 - 772
Target Start/End: Original strand, 7030540 - 7030617
Alignment:
Q  695 agagtcagaaaatgtccgtgttattggaatttggggtatgggtggtattggcaagtcaactattgccgaagaattatt 772  Q
    |||||||||| |||| |||||  |||||||||||||||||  ||| ||||| ||  |||||||||| |||||| ||||    
T  7030540 agagtcagaagatgttcgtgtccttggaatttggggtatgcctgggattggtaaaacaactattgctgaagaagtatt 7030617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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