View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13975_high_18 (Length: 508)
Name: NF13975_high_18
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13975_high_18 |
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Alignment Details
Target: chr7 (Bit Score: 449; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 449; E-Value: 0
Query Start/End: Original strand, 11 - 492
Target Start/End: Complemental strand, 41105419 - 41104934
Alignment:
| Q |
11 |
cagagacattgatgatgaagagagtgaaacagaaacaactgttcctgaagggttttttgcggttattgcaatgcaaggtgaagaaacaaagagatttgtt |
110 |
Q |
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| T |
41105419 |
cagagacattgatgatgaagagagtgaaacagaaacaactgttcctgaagggttttttgcggttattgcaatgcaaggtgaagaaacaaagagatttgtt |
41105320 |
T |
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| Q |
111 |
cttgagttggattacttaacaaatcctcatttcatgaaactattggagcaagctaaggatgagtatggttatcaacaaaagggtgctattgcattgccat |
210 |
Q |
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| T |
41105319 |
cttgagttggattacttaagaaatcctcatttcatgaaactattggagcaagctaaggatgagtatggttatcaacaaaagggtgctattgcattgccat |
41105220 |
T |
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| Q |
211 |
gtaagcctcaagaacttcaaaagattatagagaatcgacatagtgatgctttataacacttcttctggattcaataatctataattagacacatttatgt |
310 |
Q |
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| T |
41105219 |
gtaagcctcaagaacttcaaaagattatagagaatcgacatagtgatgctttataacacttcttctggattcaacaatctatatttagacacatttatgt |
41105120 |
T |
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| Q |
311 |
atacagatagtgcaaaaactatcaatattctttttagtatataaacatcaatttgatttttacataggtaggcaattcaaacaagatagttctacc---- |
406 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||| |
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| T |
41105119 |
atacagatagtgcaaaaactatcaatattctttttagtatataaacatcaatttgatttttacataggtagacatttcaaacaagatagttctacctata |
41105020 |
T |
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| Q |
407 |
tattttgaatttgtatactttcgtctcaaacatgtataatgtattgtttgtgacttttgtaacgacttaaattcttccacaaatat |
492 |
Q |
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| T |
41105019 |
tattttgaatttgtatactttcgtctcaaacatgtataatgtattgtttgtgacttttgtaacgacttaaattcttccacaaatat |
41104934 |
T |
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