View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13975_high_65 (Length: 289)
Name: NF13975_high_65
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13975_high_65 |
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Alignment Details
Target: chr4 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 11 - 253
Target Start/End: Original strand, 47654926 - 47655174
Alignment:
| Q |
11 |
tattatcatatgaagaggttaatgatataactaattaaatggcccaaggtcaaagtataaaaattaaac------tcaagtatcttgtgcctatacattg |
104 |
Q |
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| T |
47654926 |
tattatcatatgaagaggttaatgatagaactaattaaatggcccaaggtcaaagtataaaaattaaactcaaactcaagtatcttgtgcctatacattg |
47655025 |
T |
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| Q |
105 |
aagtaacatggtatgaaatccatacaaaagagtaatgctatatgaacacatatcatagacaacatgcttgttcaccttataaatgcatcattcaccgtat |
204 |
Q |
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| T |
47655026 |
aagtaacatggtatgaaatccatacaaaagagtaatgctatatgaacatatatcatagacaacatgcttgttcaccttataaatgcatcatttaccgtat |
47655125 |
T |
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| Q |
205 |
ttataagatgaacatgtatcattgcatgtttctcttaatataaatataa |
253 |
Q |
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| T |
47655126 |
ttataagatgaacatgtatcattgcatgtttctcctaatataaatataa |
47655174 |
T |
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