View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13975_high_69 (Length: 266)
Name: NF13975_high_69
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13975_high_69 |
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| [»] chr2 (1 HSPs) |
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Alignment Details
Target: chr2 (Bit Score: 201; Significance: 1e-110; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 18 - 266
Target Start/End: Complemental strand, 37553705 - 37553457
Alignment:
| Q |
18 |
atatatggaccaagttttaggaaacacataataagagaagtggacagtgttggttcttcattcatgaaccaatgatcaaagataataaggagaggttcta |
117 |
Q |
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| T |
37553705 |
atatatggaccaagttttaggaaacacataataagagaagtggacagtgttggttcttcattcatgaaccaatgatcaaagataataaggagaggttcta |
37553606 |
T |
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| Q |
118 |
gaccgtcagtcagtatgtcctttttcactcgtttgttcatgtgtttctcattatttatgccgacctcnnnnnnnnnnnnnnnnaaatttcctttgggcta |
217 |
Q |
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| T |
37553605 |
gaccgtcagtcagtatgtcctttttcactcgtttgttcatgtgtttctcattatttatgccgacctctttttttatttttttaaaatttcctttgggcta |
37553506 |
T |
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| Q |
218 |
taattcttaattgggcttcacttatgtttgcagactatgcctacattct |
266 |
Q |
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| T |
37553505 |
taattcttaattgggcttcacttatgtttgcagactatgcctacattct |
37553457 |
T |
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