View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13975_high_97 (Length: 233)
Name: NF13975_high_97
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13975_high_97 |
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Alignment Details
Target: chr1 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 68 - 185
Target Start/End: Original strand, 47560740 - 47560857
Alignment:
| Q |
68 |
aaattcaaaaagctcaaagagaactcagatttactataagaaggatattgttggagtgttgatgtaaacaaataatctactagttgtcggaagaagatgt |
167 |
Q |
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| T |
47560740 |
aaattcaaaaagctcaaagagaactcagatttgctagaagaaggatattgttggagtgctgatataaacaaataatctactagttgtcggaagaagatgt |
47560839 |
T |
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| Q |
168 |
gtttcagtgttgattttg |
185 |
Q |
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|||||||||||||||||| |
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| T |
47560840 |
gtttcagtgttgattttg |
47560857 |
T |
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