View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13975_low_16 (Length: 509)

Name: NF13975_low_16
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13975_low_16
NF13975_low_16
[»] chr3 (24 HSPs)
chr3 (12-493)||(38683568-38684061)
chr3 (8-62)||(39841650-39841704)
chr3 (8-62)||(10661133-10661187)
chr3 (8-62)||(10728221-10728275)
chr3 (8-62)||(17947164-17947218)
chr3 (8-62)||(18750579-18750633)
chr3 (8-62)||(23752598-23752652)
chr3 (8-62)||(27239425-27239479)
chr3 (8-62)||(31645458-31645512)
chr3 (8-62)||(34483299-34483353)
chr3 (8-62)||(37455784-37455838)
chr3 (8-62)||(45254649-45254703)
chr3 (8-62)||(50902555-50902609)
chr3 (9-62)||(11432494-11432547)
chr3 (14-62)||(51736962-51737010)
chr3 (14-62)||(54629802-54629850)
chr3 (8-62)||(36673354-36673408)
chr3 (8-62)||(48380086-48380140)
chr3 (8-62)||(52023093-52023147)
chr3 (8-62)||(52617181-52617235)
chr3 (8-68)||(20833843-20833904)
chr3 (52-115)||(20833927-20833991)
chr3 (14-62)||(39039028-39039076)
chr3 (14-62)||(44905051-44905099)
[»] chr8 (14 HSPs)
chr8 (8-72)||(40012379-40012443)
chr8 (8-62)||(18957928-18957982)
chr8 (8-62)||(4030538-4030592)
chr8 (8-62)||(14781342-14781396)
chr8 (8-62)||(18305171-18305225)
chr8 (8-62)||(19717075-19717129)
chr8 (8-62)||(31626246-31626300)
chr8 (8-62)||(44724991-44725045)
chr8 (8-62)||(16365223-16365277)
chr8 (8-62)||(20831174-20831228)
chr8 (8-62)||(32498837-32498891)
chr8 (8-62)||(37857824-37857878)
chr8 (8-62)||(39466728-39466782)
chr8 (8-60)||(7467353-7467405)
[»] chr2 (10 HSPs)
chr2 (403-459)||(7895119-7895175)
chr2 (8-62)||(13832763-13832817)
chr2 (8-62)||(18178218-18178272)
chr2 (8-62)||(25289101-25289155)
chr2 (8-62)||(26789731-26789785)
chr2 (8-62)||(28845524-28845578)
chr2 (8-62)||(33136540-33136594)
chr2 (8-62)||(379875-379929)
chr2 (8-62)||(28739226-28739280)
chr2 (13-62)||(2373918-2373967)
[»] chr7 (21 HSPs)
chr7 (8-62)||(39028999-39029053)
chr7 (8-68)||(7994102-7994162)
chr7 (8-62)||(510592-510646)
chr7 (8-62)||(3023871-3023925)
chr7 (8-62)||(9881494-9881548)
chr7 (8-62)||(18839240-18839294)
chr7 (8-62)||(23102237-23102291)
chr7 (8-62)||(28343256-28343310)
chr7 (14-72)||(29893908-29893966)
chr7 (8-62)||(39785042-39785096)
chr7 (8-62)||(47067646-47067700)
chr7 (14-62)||(33383593-33383641)
chr7 (8-72)||(44121144-44121208)
chr7 (52-114)||(28343339-28343402)
chr7 (8-62)||(12741319-12741373)
chr7 (8-62)||(21068302-21068356)
chr7 (8-62)||(33891441-33891495)
chr7 (75-114)||(510700-510740)
chr7 (14-62)||(37328727-37328775)
chr7 (14-62)||(37328779-37328826)
chr7 (14-62)||(48136456-48136504)
[»] chr5 (10 HSPs)
chr5 (8-72)||(40012902-40012966)
chr5 (8-62)||(1459390-1459444)
chr5 (8-62)||(13999309-13999363)
chr5 (8-62)||(37014802-37014856)
chr5 (8-62)||(39853298-39853352)
chr5 (14-62)||(7947228-7947276)
chr5 (8-62)||(4239675-4239729)
chr5 (14-72)||(13717047-13717105)
chr5 (8-62)||(13926878-13926932)
chr5 (14-62)||(5950070-5950118)
[»] chr4 (16 HSPs)
chr4 (8-72)||(5442339-5442403)
chr4 (8-62)||(5801651-5801705)
chr4 (8-62)||(27769010-27769064)
chr4 (14-72)||(28484824-28484882)
chr4 (8-62)||(29649224-29649278)
chr4 (8-62)||(30966279-30966333)
chr4 (8-62)||(32323015-32323069)
chr4 (8-62)||(41726052-41726106)
chr4 (8-62)||(48262021-48262075)
chr4 (8-62)||(50019137-50019191)
chr4 (8-62)||(51321802-51321856)
chr4 (8-72)||(37916737-37916802)
chr4 (8-62)||(32683229-32683283)
chr4 (8-62)||(49500734-49500788)
chr4 (8-62)||(54342093-54342147)
chr4 (50-114)||(23988224-23988289)
[»] chr1 (12 HSPs)
chr1 (8-72)||(28386643-28386707)
chr1 (8-62)||(6313522-6313576)
chr1 (8-62)||(9321714-9321768)
chr1 (8-62)||(20111776-20111830)
chr1 (8-62)||(25613038-25613092)
chr1 (8-62)||(51702540-51702594)
chr1 (14-62)||(5494352-5494400)
chr1 (14-62)||(46328918-46328966)
chr1 (8-62)||(29220058-29220112)
chr1 (8-62)||(29395632-29395686)
chr1 (8-62)||(49231930-49231984)
chr1 (52-115)||(45273590-45273654)
[»] scaffold0383 (1 HSPs)
scaffold0383 (8-62)||(16242-16296)
[»] scaffold0152 (2 HSPs)
scaffold0152 (8-62)||(20469-20523)
scaffold0152 (8-62)||(29278-29332)
[»] scaffold0054 (1 HSPs)
scaffold0054 (8-62)||(36495-36549)
[»] chr6 (6 HSPs)
chr6 (8-62)||(4199682-4199736)
chr6 (8-62)||(30384266-30384320)
chr6 (8-62)||(31896583-31896637)
chr6 (8-62)||(34774331-34774385)
chr6 (8-62)||(7498036-7498090)
chr6 (8-62)||(14261645-14261699)
[»] scaffold1521 (1 HSPs)
scaffold1521 (8-62)||(1387-1441)
[»] scaffold0940 (1 HSPs)
scaffold0940 (8-62)||(3668-3722)
[»] scaffold0839 (1 HSPs)
scaffold0839 (8-62)||(3208-3262)
[»] scaffold0110 (1 HSPs)
scaffold0110 (8-62)||(38847-38901)
[»] scaffold0042 (1 HSPs)
scaffold0042 (8-62)||(57264-57318)


Alignment Details
Target: chr3 (Bit Score: 370; Significance: 0; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 12 - 493
Target Start/End: Original strand, 38683568 - 38684061
Alignment:
Q  12 cattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaattgttttattaaaagagtctttaaaatcccaatccaatac 111  Q
    |||||||||||||| |||||||| |||||||||||||| || ||||||||| ||| ||| || |||||||| || | |||||||||||| |||||||||     
T  38683568 cattaaaatcttgagtatataaaatcttttacataaaagttattttaaaatctta-aaacttattttattagaaaaatctttaaaatcctaatccaataa 38683666  T
Q  112 acctta-----aacttaaatcataagtccaattcatcaaacacctagggtgctaaatttaagcgcgccttttgttttcagaacttgaatcacacgcacac 206  Q
    ||| ||     |||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38683667 accctaccctaaacttaaatcataagtccaattcatcaaacaccttgagtgctaaatttaagcgcgccttttgttttcagaacttgaatcacacgcacac 38683766  T
Q  207 aaa--------ttctcaatctcatcgtcgcacaccaccatgttcggcggtcaatcttcatcttccctcttcggaactccatcttcagcattcggcactcc 298  Q
    |||        |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38683767 aaattctcaaattctcaatctcatcgtcgcacaccaccatgttcggcggtcaatcttcatcttccctcttcggaactccatcttcagcattcggcactcc 38683866  T
Q  299 aaccttcggtactccatcttccacaccagctttcagcaccccaggtttcggtaccccttcttcaactcctgcttttggtgcttcttctacacccgctttc 398  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38683867 aaccttcggtactccatcttccacaccagctttcagcaccccaggtttcggtaccccttcttcaactcctgcttttggtgcttcttctacacccgctttc 38683966  T
Q  399 ggtggtggttcttccctcttctcaacacctttctctgctcaactacaaccccaacaacagcagcagcaacagcagaattcactctttcaactatc 493  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38683967 ggtggtggttcttccctcttctcaacaccgttctctgctcaacaacaaccccaacaacagcagcagcaacagcagaattcactctttcaactatc 38684061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 39841704 - 39841650
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  39841704 aatccattaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 39841650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 10661133 - 10661187
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  10661133 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 10661187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 10728275 - 10728221
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  10728275 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 10728221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 17947164 - 17947218
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  17947164 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 17947218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 18750579 - 18750633
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  18750579 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 18750633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 23752652 - 23752598
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  23752652 aatcctttaaaatcttgagtttataaagtcttttacataaaaagtcttttaaaat 23752598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 27239479 - 27239425
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  27239479 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 27239425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 31645512 - 31645458
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  31645512 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 31645458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 34483353 - 34483299
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  34483353 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 34483299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 37455784 - 37455838
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  37455784 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 37455838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 45254703 - 45254649
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  45254703 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 45254649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 50902609 - 50902555
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  50902609 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 50902555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 9 - 62
Target Start/End: Original strand, 11432494 - 11432547
Alignment:
Q  9 atccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  11432494 atcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 11432547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 51737010 - 51736962
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  51737010 ttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 51736962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 54629802 - 54629850
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  54629802 ttaaaatcttgaatgtataaagtcttttacataaaaagtcttttaaaat 54629850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 36673408 - 36673354
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| ||||||| |||| | |||||| ||||||||||||||| |||||||||||    
T  36673408 aatcctttaaaattttgagtgtataaagtcttttacataaaaagtcttttaaaat 36673354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 48380086 - 48380140
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| | |||||||||    
T  48380086 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagttttttaaaat 48380140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 52023147 - 52023093
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||| ||||||||||| | | |||||| |||||||||||||||||||| ||||||    
T  52023147 aatctattaaaatcttaaatgtataaaatcttttacataaaaattcttataaaat 52023093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 52617235 - 52617181
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  52617235 aatcctttaaaatcttgagtgtataaagttttttacataaaaagtcttttaaaat 52617181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20833843 - 20833904
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacat-aaaaattcttttaaaatgttaca 68  Q
    ||||| |||||||||||| | |||||| |||||||||| ||||| ||||||||||| |||||    
T  20833843 aatcctttaaaatcttgagtgtataaagtcttttacataaaaaaatcttttaaaatcttaca 20833904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 20833927 - 20833991
Alignment:
Q  52 tcttttaaaatgttacaaaattgttttattaaaagagtcttt-aaaatcccaatccaatacacct 115  Q
    ||||||||||| ||| | | || ||||||||||| ||||||| ||||||| ||||||||||||||    
T  20833927 tcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcctaatccaatacacct 20833991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 39039028 - 39039076
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  39039028 ttaaaatcttgagtgtataaagttttttacataaaaagtcttttaaaat 39039076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 44905099 - 44905051
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||| ||||| | |||||| ||||||||||||||| |||||||||||    
T  44905099 ttaaaaccttgagtgtataaagtcttttacataaaaagtcttttaaaat 44905051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 40012443 - 40012379
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    |||||||||||||||||| | |||||| ||||||||||||||||||||||||||| | |||||||    
T  40012443 aatccattaaaatcttgagtgtataaaatcttttacataaaaattcttttaaaatctcacaaaat 40012379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 18957982 - 18957928
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| |||||||||||||||||||||||||||    
T  18957982 aatcctttaaaatcttgagtgtataaagtcttttacataaaaattcttttaaaat 18957928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 4030592 - 4030538
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  4030592 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 4030538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 14781396 - 14781342
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  14781396 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 14781342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 18305225 - 18305171
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  18305225 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 18305171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 19717129 - 19717075
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  19717129 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 19717075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 31626246 - 31626300
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  31626246 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 31626300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 44725045 - 44724991
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  44725045 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 44724991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 16365223 - 16365277
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  16365223 aatcctttaaaatcttgagtgtataaagttttttacataaaaagtcttttaaaat 16365277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 20831228 - 20831174
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||| ||||||||| |||||||||||    
T  20831228 aatcctttaaaatcttgagtgtataaagtctttcacataaaaaatcttttaaaat 20831174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 32498837 - 32498891
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| ||||||||||||   |||||| ||||||||||||||| |||||||||||    
T  32498837 aatcctttaaaatcttgagcgtataaagtcttttacataaaaagtcttttaaaat 32498891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 37857824 - 37857878
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| || ||||||||| | |||||| ||||||||||||||| |||||||||||    
T  37857824 aatcctttgaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 37857878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 39466782 - 39466728
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||| ||||||| |||||||||||    
T  39466782 aatcctttaaaatcttgagtgtataaagtcttttaaataaaaagtcttttaaaat 39466728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 8 - 60
Target Start/End: Original strand, 7467353 - 7467405
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaa 60  Q
    ||||| |||||||||||| | |||||| | ||||||||||||| |||||||||    
T  7467353 aatcctttaaaatcttgagtgtataaagttttttacataaaaagtcttttaaa 7467405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 403 - 459
Target Start/End: Complemental strand, 7895175 - 7895119
Alignment:
Q  403 gtggttcttccctcttctcaacacctttctctgctcaactacaaccccaacaacagc 459  Q
    |||||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||    
T  7895175 gtggttcttccctcttctcagcaccgttctctgctcaacaacaaccgcaacaacagc 7895119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 13832817 - 13832763
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  13832817 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 13832763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 18178218 - 18178272
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  18178218 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 18178272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 25289101 - 25289155
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  25289101 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 25289155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 26789731 - 26789785
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  26789731 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 26789785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 28845524 - 28845578
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  28845524 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 28845578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 33136540 - 33136594
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  33136540 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 33136594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 379875 - 379929
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||| ||||||| | |||||| ||||||||||||||| |||||||||||    
T  379875 aatcctttaagatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 379929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 28739280 - 28739226
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| |||||||| |||||| |||||||||||    
T  28739280 aatcctttaaaatcttgagtgtataaagtcttttacctaaaaagtcttttaaaat 28739226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 13 - 62
Target Start/End: Original strand, 2373918 - 2373967
Alignment:
Q  13 attaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||||||||||| | |||||| ||||||||||||||| ||||| |||||    
T  2373918 attaaaatcttgaatgtataaagtcttttacataaaaagtctttcaaaat 2373967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 39028999 - 39029053
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||||||||||||||||||| |||||||||||    
T  39028999 aatcctttaaaatcttgagtgtataaattcttttacataaaaagtcttttaaaat 39029053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 7994102 - 7994162
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttaca 68  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| ||||||||||| |||||    
T  7994102 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaatcttaca 7994162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 510592 - 510646
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  510592 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 510646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 3023871 - 3023925
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  3023871 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 3023925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 9881548 - 9881494
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  9881548 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 9881494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 18839240 - 18839294
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  18839240 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 18839294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 23102237 - 23102291
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  23102237 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 23102291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 28343256 - 28343310
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  28343256 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 28343310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 29893908 - 29893966
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  29893908 ttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaat 29893966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 39785042 - 39785096
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  39785042 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 39785096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 47067646 - 47067700
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  47067646 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 47067700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 33383593 - 33383641
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| |||||||| |||||||||| |||| |||||||||||    
T  33383593 ttaaaatcttgagtatataaagtcttttacatcaaaagtcttttaaaat 33383641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 44121208 - 44121144
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    ||||| ||||||| |||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  44121208 aatcctttaaaatattgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaat 44121144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 52 - 114
Target Start/End: Original strand, 28343339 - 28343402
Alignment:
Q  52 tcttttaaaatgttacaaaattgttttattaaaagagtcttt-aaaatcccaatccaatacacc 114  Q
    ||||||||||| ||| | | || ||||||||||| ||||||| |||||||||||||||||||||    
T  28343339 tcttttaaaatcttaaagactttttttattaaaatagtcttttaaaatcccaatccaatacacc 28343402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 12741319 - 12741373
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  12741319 aatcctttaaaatcttgagtgtataaagttttttacataaaaagtcttttaaaat 12741373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 21068302 - 21068356
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| | |||||||||    
T  21068302 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagttttttaaaat 21068356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 33891495 - 33891441
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | || ||| ||||||||||||||| |||||||||||    
T  33891495 aatcctttaaaatcttgagtgtaaaaagtcttttacataaaaagtcttttaaaat 33891441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 75 - 114
Target Start/End: Original strand, 510700 - 510740
Alignment:
Q  75 ttttattaaaagagtcttt-aaaatcccaatccaatacacc 114  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  510700 ttttattaaaatagtcttttaaaatcccaatccaatacacc 510740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 37328727 - 37328775
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| |||||||||| |||| |||||||||||    
T  37328727 ttaaaatcttgagtgtataaagtcttttacatgaaaagtcttttaaaat 37328775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 37328779 - 37328826
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  37328779 ttaaaatcttgagt-tataaaatcttttacataaaaagtcttttaaaat 37328826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 48136504 - 48136456
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | ||| || ||||||||||||||| |||||||||||    
T  48136504 ttaaaatcttgagtgtatgaagtcttttacataaaaagtcttttaaaat 48136456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 40012966 - 40012902
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  40012966 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaat 40012902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 1459444 - 1459390
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  1459444 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 1459390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 13999363 - 13999309
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  13999363 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 13999309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 37014802 - 37014856
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  37014802 aatcctttaaaatcttgagtgtataaaatcttttacataaaaaatcttttaaaat 37014856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 39853298 - 39853352
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  39853298 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 39853352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 7947276 - 7947228
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  7947276 ttaaaatcttgagtgtataaagtcttttacataaaaaatcttttaaaat 7947228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 4239729 - 4239675
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | | |||| ||||||||||||||| |||||||||||    
T  4239729 aatcctttaaaatcttgagtgtttaaagtcttttacataaaaagtcttttaaaat 4239675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 13717047 - 13717105
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    |||| ||||||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  13717047 ttaatatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaat 13717105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 13926878 - 13926932
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| ||||||||||||   |||||| ||||||||||||||| |||||||||||    
T  13926878 aatcctttaaaatcttgagagtataaagtcttttacataaaaagtcttttaaaat 13926932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 5950070 - 5950118
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| ||||||||||||||| || ||||||||    
T  5950070 ttaaaatcttgagtgtataaagtcttttacataaaaagtcatttaaaat 5950118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 16)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 5442339 - 5442403
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  5442339 aatcctttaaaatcttgagtttataaagtcttttacataaaaagtcttttaaaatctcacaaaat 5442403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 5801651 - 5801705
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  5801651 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 5801705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 27769010 - 27769064
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  27769010 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 27769064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 14 - 72
Target Start/End: Original strand, 28484824 - 28484882
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    |||||||||||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  28484824 ttaaaatcttgagtgtataaaatcttttacataaaaaatcttttaaaatctcacaaaat 28484882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 29649278 - 29649224
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  29649278 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 29649224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 30966333 - 30966279
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  30966333 aatcctttaaaatcttgagtttataaagtcttttacataaaaagtcttttaaaat 30966279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 32323015 - 32323069
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  32323015 aatcctttaaaatcttgaatgtataaagtcttttacataaaaagtcttttaaaat 32323069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 41726052 - 41726106
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  41726052 aatcctttaaaatcttgaatgtataaagtcttttacataaaaagtcttttaaaat 41726106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 48262021 - 48262075
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  48262021 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 48262075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 50019137 - 50019191
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  50019137 aatcctttaaaatcttgagtgtataaaatcttttacataaaaagtcttttaaaat 50019191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 51321802 - 51321856
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  51321802 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 51321856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 8 - 72
Target Start/End: Original strand, 37916737 - 37916802
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacat-aaaaattcttttaaaatgttacaaaat 72  Q
    ||||| |||||||||||||| |||||| |||||||||| ||||| ||||||||||| | |||||||    
T  37916737 aatcctttaaaatcttgactgtataaagtcttttacataaaaaagtcttttaaaatctcacaaaat 37916802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 32683283 - 32683229
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| || |||||||||||| |||||||||||    
T  32683283 aatcctttaaaatcttgagtgtataaagtcgtttacataaaaaatcttttaaaat 32683229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 49500788 - 49500734
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||  ||||||||||||||| |||||||||||    
T  49500788 aatcctttaaaatcttgagtgtataacgtcttttacataaaaagtcttttaaaat 49500734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 54342093 - 54342147
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| |||||| |||||||| |||||||||||    
T  54342093 aatcctttaaaatcttgagtgtataaagtcttttgcataaaaagtcttttaaaat 54342147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 23988224 - 23988289
Alignment:
Q  50 attcttttaaaatgttacaaaattgttttattaaaagagtc-tttaaaatcccaatccaatacacc 114  Q
    ||||||||||||| ||| | | || ||||||||||| |||| |||||||||| |||||||||||||    
T  23988224 attcttttaaaatcttaaagattttttttattaaaatagtcttttaaaatcctaatccaatacacc 23988289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 72
Target Start/End: Complemental strand, 28386707 - 28386643
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaatgttacaaaat 72  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| ||||||||||| | |||||||    
T  28386707 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaatctcacaaaat 28386643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 6313522 - 6313576
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  6313522 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 6313576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 9321768 - 9321714
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  9321768 aatcctttaaaatcttgagtgtataaaatcttttacataaaaagtcttttaaaat 9321714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 20111830 - 20111776
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||| ||||||||||||| | |||||||||||||| ||||||| |||||||||||    
T  20111830 aatctattaaaatcttgagtgtataaattcttttatataaaaagtcttttaaaat 20111776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 25613038 - 25613092
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  25613038 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 25613092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 51702540 - 51702594
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  51702540 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 51702594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Complemental strand, 5494400 - 5494352
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| |||||||| ||||||||||||||| | |||||||||    
T  5494400 ttaaaatcttgattatataaagtcttttacataaaaagtgttttaaaat 5494352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 14 - 62
Target Start/End: Original strand, 46328918 - 46328966
Alignment:
Q  14 ttaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  46328918 ttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 46328966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 29220058 - 29220112
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| ||||||| |||| | |||||| ||||||||||||||| |||||||||||    
T  29220058 aatcctttaaaattttgagtgtataaagtcttttacataaaaagtcttttaaaat 29220112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 29395686 - 29395632
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| |||||| |||||||| |||||||||||    
T  29395686 aatcctttaaaatcttgagtgtataaagtcttttgcataaaaagtcttttaaaat 29395632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 49231930 - 49231984
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| | |||||||||    
T  49231930 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtattttaaaat 49231984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 52 - 115
Target Start/End: Original strand, 45273590 - 45273654
Alignment:
Q  52 tcttttaaaatgttacaaaattgttttattaaaagagtcttt-aaaatcccaatccaatacacct 115  Q
    ||||||||||| ||| ||| || ||||||||||| | ||||| ||||||| ||||||||||||||    
T  45273590 tcttttaaaatcttaaaaactttttttattaaaataatcttttaaaatcctaatccaatacacct 45273654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 16296 - 16242
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  16296 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 16242  T

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Target: scaffold0152 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 20523 - 20469
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  20523 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 20469  T

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Target: scaffold0152; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 29278 - 29332
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  29278 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 29332  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 36549 - 36495
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  36549 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 36495  T

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Target: chr6 (Bit Score: 35; Significance: 0.0000000002; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 4199736 - 4199682
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  4199736 aatcctttaaaatcttgagtgtataaaatcttttacataaaaagtcttttaaaat 4199682  T

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Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 30384320 - 30384266
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  30384320 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 30384266  T

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Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 31896583 - 31896637
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  31896583 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 31896637  T

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Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 34774331 - 34774385
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| |||||||||||    
T  34774331 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtcttttaaaat 34774385  T

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Target: chr6; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Original strand, 7498036 - 7498090
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||  | |||||| ||||||||||||||| |||||||||||    
T  7498036 aatcctttaaaatcttgggtgtataaagtcttttacataaaaagtcttttaaaat 7498090  T

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Target: chr6; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 14261699 - 14261645
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| | ||||||||||||| |||||||||||    
T  14261699 aatcctttaaaatcttgagtgtataaagttttttacataaaaagtcttttaaaat 14261645  T

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Target: scaffold1521 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 1441 - 1387
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| |||||||| |||||| |||||||||||    
T  1441 aatcctttaaaatcttgagtgtataaagtcttttacttaaaaagtcttttaaaat 1387  T

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Target: scaffold0940 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0940
Description:

Target: scaffold0940; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 3722 - 3668
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| | |||||||||    
T  3722 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagttttttaaaat 3668  T

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Target: scaffold0839 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0839
Description:

Target: scaffold0839; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 3262 - 3208
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||||| ||||||||||||||| ||| |||||||    
T  3262 aatcctttaaaatcttgagtgtataaagtcttttacataaaaagtctcttaaaat 3208  T

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Target: scaffold0110 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 38901 - 38847
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| ||||||| |||| | |||||| ||||||||||||||| |||||||||||    
T  38901 aatcctttaaaatattgagtgtataaagtcttttacataaaaaatcttttaaaat 38847  T

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Target: scaffold0042 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 62
Target Start/End: Complemental strand, 57318 - 57264
Alignment:
Q  8 aatccattaaaatcttgactatataaattcttttacataaaaattcttttaaaat 62  Q
    ||||| |||||||||||| | |||| | ||||||||||||||| |||||||||||    
T  57318 aatcctttaaaatcttgagtgtatagagtcttttacataaaaagtcttttaaaat 57264  T

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