View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13975_low_39 (Length: 413)

Name: NF13975_low_39
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13975_low_39
NF13975_low_39
[»] chr6 (2 HSPs)
chr6 (18-395)||(6588468-6588845)
chr6 (17-143)||(6416813-6416939)
[»] chr5 (3 HSPs)
chr5 (18-360)||(28532332-28532680)
chr5 (264-323)||(41888933-41888992)
chr5 (244-300)||(29021373-29021429)
[»] chr4 (9 HSPs)
chr4 (17-207)||(21833492-21833682)
chr4 (241-358)||(21833746-21833863)
chr4 (31-124)||(532584-532680)
chr4 (249-294)||(1601088-1601133)
chr4 (166-207)||(1601184-1601225)
chr4 (86-114)||(371390-371418)
chr4 (278-370)||(641537-641629)
chr4 (30-58)||(8186554-8186582)
chr4 (165-205)||(53761152-53761192)
[»] chr3 (4 HSPs)
chr3 (24-207)||(51763591-51763774)
chr3 (17-143)||(13469858-13469984)
chr3 (81-118)||(513927-513964)
chr3 (248-370)||(51763815-51763937)
[»] chr2 (1 HSPs)
chr2 (71-197)||(32785306-32785432)
[»] chr8 (3 HSPs)
chr8 (71-207)||(18314876-18315012)
chr8 (79-119)||(32151737-32151777)
chr8 (79-119)||(18318890-18318930)
[»] chr1 (3 HSPs)
chr1 (18-207)||(19467632-19467821)
chr1 (73-118)||(9587028-9587073)
chr1 (244-382)||(19467870-19468008)
[»] chr7 (2 HSPs)
chr7 (244-299)||(10615269-10615324)
chr7 (31-118)||(10615459-10615546)


Alignment Details
Target: chr6 (Bit Score: 350; Significance: 0; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 18 - 395
Target Start/End: Original strand, 6588468 - 6588845
Alignment:
Q  18 gctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttc 117  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||    
T  6588468 gctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaacaattgtaagcttc 6588567  T
Q  118 tccaggaagtcaacatgtttggttgtcgtgaattaaccaatgcaggcattgcttctgctcttcgtgagagaccaaaattgacgtctttattgttatcaat 217  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6588568 tccaggaagtcaacatatttggttgtcgtgaattaaccaatgcaggcattgcttctgctctccgtgagagaccaaaattgacgtctttattgttatcaat 6588667  T
Q  218 atcacttcatcatgatgaattccctgcttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgtctgctttgaatatctcc 317  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6588668 atcacttcatcatgatgaattcactgcttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgtctgctttgaatatctcc 6588767  T
Q  318 gatgagtttctctacactattgcaagtaaacgtcttcctttgacaagacttgtactcaaatattgttctggccgttat 395  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6588768 gatgagttgctctacactattgcaaggaaacgtcttcctttgacaagacttgtactcaaatattgttctggccgttat 6588845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 143
Target Start/End: Complemental strand, 6416939 - 6416813
Alignment:
Q  17 agctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagctt 116  Q
    |||||| ||||| |||||||| ||||| ||||| ||||||||||||   |||||  | ||||| ||||| |||||||| || ||| | ||||||||||||    
T  6416939 agctctatcacttgcactttttaaactccgcaaagttaatctttctagatttcctgtaaacaaccaatcccttttccagttattccacaactgtaagctt 6416840  T
Q  117 ctccaggaagtcaacatgtttggttgt 143  Q
    ||| | ||||||| ||||||| |||||    
T  6416839 ctcgaagaagtcatcatgtttagttgt 6416813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 9e-46; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 9e-46
Query Start/End: Original strand, 18 - 360
Target Start/End: Complemental strand, 28532680 - 28532332
Alignment:
Q  18 gctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttc 117  Q
    |||||||||||  |||||  |||||| ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||||||||  |||||||||||||    
T  28532680 gctctctcactttcacttcacaaactccgcaaggttaatctttcttcctttcccatcaacaaccaatcacttttccacttgttcagcaactgtaagcttc 28532581  T
Q  118 tccaggaagtcaacatgtttggttgt---cgtgaattaaccaatgcaggcattgcttctgctcttcgtgagagaccaaaattgacgtctttattgtta-- 212  Q
    |||| |||||||||||   ||||| |   |    ||||||| |||||||||||||||||||||| ||||||||||| | ||||| |||||| | ||||      
T  28532580 tccaagaagtcaacattgatggttataagcaattattaaccgatgcaggcattgcttctgctctccgtgagagaccgacattgatgtctttctcgttatc 28532481  T
Q  213 -------tcaatatcacttcatcatgatgaattccctgcttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgtctgct 305  Q
           |||||||||| || ||       ||||    |||||||| | |||||||||||||||||||| ||| ||||||||||||||||||||| |  |    
T  28532480 atcgtattcaatatcacgtcctc------cattcatgacttcacatattattgactcattggtgagtttcaagggtttgacttgtcttggtttgtattat 28532387  T
Q  306 ttgaatatctccgatgagtttctctacactattgcaagtaaacgtcttcctttga 360  Q
    || ||||| || |||||||| |||||||||||||||||   | ||||||||||||    
T  28532386 tttaatatttctgatgagttgctctacactattgcaaggggaggtcttcctttga 28532332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 323
Target Start/End: Original strand, 41888933 - 41888992
Alignment:
Q  264 ttggtgagtttgaagagtttgacttgtcttggtttgtctgctttgaatatctccgatgag 323  Q
    |||||||||||||||   ||||||||||||| ||||| | ||||||||||||||||||||    
T  41888933 ttggtgagtttgaagtacttgacttgtcttgatttgttttctttgaatatctccgatgag 41888992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 29021429 - 29021373
Alignment:
Q  244 cttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgt 300  Q
    |||||||||| |||||||  ||||||||||| ||| |||| |||||||||| |||||    
T  29021429 cttcacatttcattgacttgttggtgagtttcaagggtttaacttgtcttgatttgt 29021373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 67; Significance: 1e-29; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 17 - 207
Target Start/End: Original strand, 21833492 - 21833682
Alignment:
Q  17 agctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagctt 116  Q
    |||||| ||||| |||||| ||||||| ||||||||||||||||||  ||||||||| ||||||||||| |||||||||||| | || || |||||||||    
T  21833492 agctctttcacttgcacttatcaaactccgcaaggttaatctttctggctttcccataaacaatcaatctcttttccacttgctaaagaattgtaagctt 21833591  T
Q  117 ctccaggaagtcaacatgtttggttgtcgtgaattaaccaatgcaggcattgcttctgctcttcgtgagagaccaaaattgacgtctttat 207  Q
    ||  | || |||| |||||||| ||||  | || ||| ||  | |||||||||||| ||||| ||||||||||||| |||||  |||||||    
T  21833592 cttgaagaggtcatcatgtttgattgtgatcaaataagcagagaaggcattgcttcagctctccgtgagagaccaacattgagttctttat 21833682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 358
Target Start/End: Original strand, 21833746 - 21833863
Alignment:
Q  241 ctgcttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgtctgctttgaatatctccgatgagtttctctacactattgc 340  Q
    |||||||| |||| |||| |||||| |||||||||||| |||||||||||||| |||||  | ||||| ||||||  |||||||| |||||| |||||||    
T  21833746 ctgcttcatattttattggctcattagtgagtttgaagggtttgacttgtcttagtttgcgttctttgtatatcttggatgagttactctactctattgc 21833845  T
Q  341 aagtaaacgtcttccttt 358  Q
    |||  || ||||||||||    
T  21833846 aagggaaggtcttccttt 21833863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 124
Target Start/End: Complemental strand, 532680 - 532584
Alignment:
Q  31 cacttttcaaacttcgcaaggttaatctttcttact--ttcc--catcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttctccagga 124  Q
    ||||||||||||| |||||||||||||||||| |||  |  |  ||||||| | |||||||||||||||||||||||||| |||||||||||| ||||    
T  532680 cacttttcaaactccgcaaggttaatctttct-actcatgactacatcaacgaccaatcgcttttccacttgttcaaaaattgtaagcttctcgagga 532584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 1601133 - 1601088
Alignment:
Q  249 catttaattgactcattggtgagtttgaagagtttgacttgtcttg 294  Q
    ||||| ||| |||||||||||||||||||| |||||||||||||||    
T  1601133 catttcattcactcattggtgagtttgaagggtttgacttgtcttg 1601088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 207
Target Start/End: Complemental strand, 1601225 - 1601184
Alignment:
Q  166 ttgcttctgctcttcgtgagagaccaaaattgacgtctttat 207  Q
    ||||||||||||| ||||||||||||| ||||| ||||||||    
T  1601225 ttgcttctgctctccgtgagagaccaacattgaggtctttat 1601184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 86 - 114
Target Start/End: Complemental strand, 371418 - 371390
Alignment:
Q  86 gcttttccacttgttcaaaaactgtaagc 114  Q
    |||||||||||||||||||||||||||||    
T  371418 gcttttccacttgttcaaaaactgtaagc 371390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 370
Target Start/End: Complemental strand, 641629 - 641537
Alignment:
Q  278 gagtttgacttgtcttggtttgtctgctttgaatatctccgatgagtttctctacactattgcaagtaaacgtcttcctttgacaagacttgt 370  Q
    ||||||||||| ||| | |||| || |||  ||||| ||| |||||||||||| | |||||||||  ||| | ||||||||||| ||||||||    
T  641629 gagtttgacttctctcgatttgacttcttcaaatatatccaatgagtttctctcctctattgcaatgaaaggccttcctttgacgagacttgt 641537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 30 - 58
Target Start/End: Original strand, 8186554 - 8186582
Alignment:
Q  30 gcacttttcaaacttcgcaaggttaatct 58  Q
    |||||||||||||||||||||||||||||    
T  8186554 gcacttttcaaacttcgcaaggttaatct 8186582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Original strand, 53761152 - 53761192
Alignment:
Q  165 attgcttctgctcttcgtgagagaccaaaattgacgtcttt 205  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  53761152 attgcttctgctctccgtgaaagaccaacattgacgtcttt 53761192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 4e-23; HSPs: 4)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 24 - 207
Target Start/End: Original strand, 51763591 - 51763774
Alignment:
Q  24 tcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttctccagg 123  Q
    ||||| || ||||||||||| || ||||||||| |||||  || |||||| ||||||||||||||||||||| |  |    ||||||||||||||||| |    
T  51763591 tcacttgctcttttcaaactgcgtaaggttaatttttctggctgtcccataaacaatcaatcgcttttccaccttctatgcaactgtaagcttctccaag 51763690  T
Q  124 aagtcaacatgtttggttgtcgtgaattaaccaatgcaggcattgcttctgctcttcgtgagagaccaaaattgacgtctttat 207  Q
    | |||| ||||||||  |||  | || |||||||||||||  |  |||||||||| ||||| ||||||| ||||||||||||||    
T  51763691 atgtcatcatgtttgactgtgatcaaataaccaatgcaggagtcacttctgctctccgtgaaagaccaacattgacgtctttat 51763774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 17 - 143
Target Start/End: Original strand, 13469858 - 13469984
Alignment:
Q  17 agctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagctt 116  Q
    |||||| ||||| |||||||| ||||| ||||||||||||||||||   ||||| || ||||| | ||| ||||||||||| ||| | ||||||||||||    
T  13469858 agctctatcacttgcactttttaaactccgcaaggttaatctttctagttttcctataaacaacctatcacttttccacttattccacaactgtaagctt 13469957  T
Q  117 ctccaggaagtcaacatgtttggttgt 143  Q
    ||| | ||||||| ||||||| |||||    
T  13469958 ctcgaagaagtcatcatgtttagttgt 13469984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 81 - 118
Target Start/End: Original strand, 513927 - 513964
Alignment:
Q  81 caatcgcttttccacttgttcaaaaactgtaagcttct 118  Q
    ||||||||||||||||||||||||||||||||||||||    
T  513927 caatcgcttttccacttgttcaaaaactgtaagcttct 513964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 370
Target Start/End: Original strand, 51763815 - 51763937
Alignment:
Q  248 acatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgtctgctttgaatatctccgatgagtttctctacactattgcaagtaaa 347  Q
    |||||| ||||| || ||||||||||||||| ||||||||| ||||| ||||     |||||| ||||| |||||||| |||||| | ||||||||  ||    
T  51763815 acattttattgattcgttggtgagtttgaagggtttgacttctcttgatttgaagcgtttgaaaatctctgatgagttgctctactcgattgcaagggaa 51763914  T
Q  348 cgtcttcctttgacaagacttgt 370  Q
     |||||| ||||| ||| |||||    
T  51763915 ggtcttcttttgaaaaggcttgt 51763937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 71 - 197
Target Start/End: Original strand, 32785306 - 32785432
Alignment:
Q  71 catcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttctccaggaagtcaacatgtttggttgtcgtgaattaaccaatgcaggcattgct 170  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||| | |||| || ||| ||||  |||| | || || ||||||| || || |||    
T  32785306 catcaacaatcaatcgcttttccacttgttcaaaaacttgaagcttctcaaagaagccatcatatttgactgtcataaaatatccaatgccggtatagct 32785405  T
Q  171 tctgctcttcgtgagagaccaaaattg 197  Q
    |||||||| ||||||| ||||| ||||    
T  32785406 tctgctctccgtgagacaccaatattg 32785432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 71 - 207
Target Start/End: Original strand, 18314876 - 18315012
Alignment:
Q  71 catcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttctccaggaagtcaa-catgtttggttgtcgtgaattaaccaatgcaggcattgc 169  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||||||| | | || ||| ||| |||   |||| | || ||||||| || || |||||    
T  18314876 catcaacgatcaatcgcttttccacttgttcaagaactgtaagcttctcgaag-agacaatcatattttactgtcatcaaataaccaacgcgggtattgc 18314974  T
Q  170 ttctgctcttcgtgagagaccaaaattgacgtctttat 207  Q
    || |||||| |||||||||||||  |||| ||||||||    
T  18314975 ttttgctctccgtgagagaccaactttgaggtctttat 18315012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 79 - 119
Target Start/End: Complemental strand, 32151777 - 32151737
Alignment:
Q  79 atcaatcgcttttccacttgttcaaaaactgtaagcttctc 119  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  32151777 atcaatcgcttttccacttgttcaacaactggaagcttctc 32151737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 119
Target Start/End: Original strand, 18318890 - 18318930
Alignment:
Q  79 atcaatcgcttttccacttgttcaaaaactgtaagcttctc 119  Q
    ||||||||||| ||||||||||||| ||||| |||||||||    
T  18318890 atcaatcgcttatccacttgttcaagaactggaagcttctc 18318930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 207
Target Start/End: Original strand, 19467632 - 19467821
Alignment:
Q  18 gctctctcactcgcacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttc 117  Q
    ||||| ||||| |||||| ||||||| ||||||||||||||||||  ||||||||| | | |  ||||| |||| |||||||| || || ||||||||||    
T  19467632 gctctttcacttgcacttctcaaactccgcaaggttaatctttctggctttcccatgagcgacaaatcgatttttcacttgtttaacaattgtaagcttc 19467731  T
Q  118 tccaggaagtcaacatgtttggttgtcgtgaattaaccaatgcaggcattgcttctgctcttcgtgagagaccaaaattgacgtctttat 207  Q
    |  | || || | ||||||| | |||  | || | || | ||| || |||||||||||| | ||||||||||||| ||||| ||||||||    
T  19467732 ttgaagaggttaccatgttttggtgtgatcaaatgactattgctggaattgcttctgctatccgtgagagaccaacattgaggtctttat 19467821  T

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Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 118
Target Start/End: Complemental strand, 9587073 - 9587028
Alignment:
Q  73 tcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttct 118  Q
    ||||||| |||||||||||||||||||||||||| ||||| |||||    
T  9587073 tcaacaaccaatcgcttttccacttgttcaaaaattgtaatcttct 9587028  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 244 - 382
Target Start/End: Original strand, 19467870 - 19468008
Alignment:
Q  244 cttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttgtctgctttgaatatctccgatgagtttctctacactattgcaag 343  Q
    |||| ||||| |||||||||||| ||||||||||| ||||||||| ||||  || ||    | |||||||||| |||||  | |||||| |||||||| |    
T  19467870 cttcgcattttattgactcattgctgagtttgaagggtttgacttctcttacttggtggtttctgaatatctctgatgaaatgctctactctattgcacg 19467969  T
Q  344 taaacgtcttcctttgacaagacttgtactcaaatattg 382  Q
      || | || |||||||| || ||||| |||||||||||    
T  19467970 ggaagggctacctttgacgaggcttgtcctcaaatattg 19468008  T

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Target: chr7 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 10615324 - 10615269
Alignment:
Q  244 cttcacatttaattgactcattggtgagtttgaagagtttgacttgtcttggtttg 299  Q
    |||||||||| |||||||||||||||||||||||| | ||||||||||||| ||||    
T  10615324 cttcacattttattgactcattggtgagtttgaagggcttgacttgtcttgatttg 10615269  T

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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 118
Target Start/End: Complemental strand, 10615546 - 10615459
Alignment:
Q  31 cacttttcaaacttcgcaaggttaatctttcttactttcccatcaacaatcaatcgcttttccacttgttcaaaaactgtaagcttct 118  Q
    ||||||| ||||| ||||||||||||||||||   |||| ||| ||||||||||| ||| |||||||| || | ||||||||||||||    
T  10615546 cactttttaaactccgcaaggttaatctttctagttttctcataaacaatcaatcccttctccacttgctcgacaactgtaagcttct 10615459  T

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