View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13975_low_69 (Length: 292)
Name: NF13975_low_69
Description: NF13975
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13975_low_69 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 19 - 292
Target Start/End: Original strand, 46302832 - 46303105
Alignment:
| Q |
19 |
gacaccccgtcgctcttcaggttcagaatgatgtcattaacagcaatgtctatatagtttactgcaattagaattttatagtgtaattttgtttattgat |
118 |
Q |
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| T |
46302832 |
gacaccccgtcgctcttcaggttcagaatgatgtcattaacagcaatgtctatatagtttactgcaattagaattttatagtgtaattttgattattgat |
46302931 |
T |
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| Q |
119 |
ataaatagtgtaatttaaaggaaaattttcctttaatccaatattttgtcaatgtgaggtgctgcttttgacttccaatttgcacaagcatagtgattaa |
218 |
Q |
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| T |
46302932 |
ataaatagtgtaatttaaaggaaaattttcctttaatccaatattttgtcaatgtgaggtgctgcttttgacttccaatttgcacaagcatagtgattaa |
46303031 |
T |
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| Q |
219 |
ttaaactgcctattttttccaaggatgtgtatgcatggagtcaaaaaatgtgcatgtattagtaattttccttt |
292 |
Q |
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| T |
46303032 |
ttaaactgcctattttttccaaggatgtgtatgcattgagtcaaaaaatatgcatgtattagtaattttccttt |
46303105 |
T |
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