View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13976_low_1 (Length: 615)
Name: NF13976_low_1
Description: NF13976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13976_low_1 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 510; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 510; E-Value: 0
Query Start/End: Original strand, 1 - 561
Target Start/End: Complemental strand, 29157431 - 29156870
Alignment:
| Q |
1 |
ccgaaaaaacctaaagctattgcagcaccaaaagcctcctttcttcctttcctccaaccatcccacaaatgtcttgacgtgctttctaaatgatagaaac |
100 |
Q |
| |
|
||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29157431 |
ccgaagaaacctaaagctattgcagcaccaaaaagctcatttcttcctttcctccaatcatcccacaaatgtcttgacgtgctttctaaatgatagaaac |
29157332 |
T |
|
| Q |
101 |
caagctttcaacaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaattgcccgt |
200 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29157331 |
caagctttcaacaaaaaccttggcagagaaccattgtattggatcgataattctagtcctctttgctgtattatccctcaaattatatagaattgcccgt |
29157232 |
T |
|
| Q |
201 |
tgtt-ttgattattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctag |
299 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29157231 |
tgttcttgattattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtcagcaaaatcatgaaatctag |
29157132 |
T |
|
| Q |
300 |
ttcgaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatc |
399 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29157131 |
ttcgaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatgtttccatctgccatataatgaattcggttcttctataatc |
29157032 |
T |
|
| Q |
400 |
atgagaaaaacacaacgaatctttcaatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgac |
499 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
29157031 |
atgagaaaaacacaaggaatctttcaatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggagacatcaactgtgtgtatgac |
29156932 |
T |
|
| Q |
500 |
tctgtttccacatcaagtgaaacaatgacaaattccttagcctcaatatcctcccaaacatc |
561 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29156931 |
tctgtttccacatcaagtgaaacaatgacaaattccttagcctcaatatcctcccaaacatc |
29156870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 396; Significance: 0; HSPs: 6)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 396; E-Value: 0
Query Start/End: Original strand, 11 - 561
Target Start/End: Complemental strand, 2596380 - 2595829
Alignment:
| Q |
11 |
ctaaagctattgcagcaccaaaagcctcctttcttcctttcctccaaccatcccacaaatgtcttgacgtgctttctaaatgatagaaaccaagctttca |
110 |
Q |
| |
|
|||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
2596380 |
ctaaagctattgtagcaccaaaaagctcctttcttcctttcctccaaccatcccataaatgtcttgacgtgctttctaaatgtcagaaaccaaactttcg |
2596281 |
T |
|
| Q |
111 |
acaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaattgcccgttgtt-ttgat |
209 |
Q |
| |
|
||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
2596280 |
acataaaccttggcagagaaccattgtatttcatcgataattctagtccgctttgctgtattattcctcaaattatatagaattgctcgttgttcttgat |
2596181 |
T |
|
| Q |
210 |
tattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagt |
309 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| | |
|
|
| T |
2596180 |
tattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtcagcaaaatcatgaaatctagtccgaagatt |
2596081 |
T |
|
| Q |
310 |
ttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaa |
409 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||||||||||| |||||||| ||||||||||||||| |
|
|
| T |
2596080 |
ttggtaactaattttaaggagttgagtccatggctcttcaactccaataatcttcatctgccatataatgaattcagttcttctgtaatcatgagaaaaa |
2595981 |
T |
|
| Q |
410 |
cacaacgaatctttcaatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttcca |
509 |
Q |
| |
|
||||| || ||||||||||||||||||||||| ||||||||||||||||||||||||||| || |||||||||||||||| ||||| ||||| ||| ||| |
|
|
| T |
2595980 |
cacaaggagtctttcaatatacataaagatggcggcttaatagatgacatttcatcaaaaccagagggaggcatcaactgcgtgtacgactccgttccca |
2595881 |
T |
|
| Q |
510 |
catcaagtgaaacaatgacaaattccttagcctcaatatcctcccaaacatc |
561 |
Q |
| |
|
|| ||||||||||||||||||||||||||||| ||||| ||||||| |||| |
|
|
| T |
2595880 |
tataaagtgaaacaatgacaaattccttagccttaatattctcccaaccatc |
2595829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 324; E-Value: 0
Query Start/End: Original strand, 11 - 561
Target Start/End: Complemental strand, 2581691 - 2581140
Alignment:
| Q |
11 |
ctaaagctattgcagcaccaaaagcctcctttcttcctttcctccaaccatcccacaaatgtcttgacgtgctttctaaatgatagaaaccaagctttca |
110 |
Q |
| |
|
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
2581691 |
ctaaagctattgtagcaccaaaaagctcctttcttcctttcctccaaccatcccacaaatgtcttgacgtgctttctaaatgtcagaaaccaagctttca |
2581592 |
T |
|
| Q |
111 |
acaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaattgcccgttgtt-ttgat |
209 |
Q |
| |
|
||| |||||||| || ||||||||| |||| || |||| |||||||||||||||||||||||| ||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
2581591 |
acataaaccttgacaaagaaccattctatttcatggataattctagtccgctttgctgtattattcctcaaattatatagaattgctcgttgttcttgat |
2581492 |
T |
|
| Q |
210 |
tattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagt |
309 |
Q |
| |
|
|||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||| |||||| ||||| ||||| |||||||||||||| | |
|
|
| T |
2581491 |
tattagccaatattagtgtatcattgtgatcagaaaggtgcaaaggcaacaattgacaattttccaagtcatcaaaagcatgatatctagttcgaagaat |
2581392 |
T |
|
| Q |
310 |
ttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaa |
409 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||| |||||||||| || | |||||||||||||| ||||| |||||||| ||||||||||||| |
|
|
| T |
2581391 |
ttggtaactaattttaaggagttgagtccatgactcgtcaactccaatgatcttcatctgccatataaccaattcagttcttctgacatcatgagaaaaa |
2581292 |
T |
|
| Q |
410 |
cacaacgaatctttcaatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttcca |
509 |
Q |
| |
|
||||| || || |||||||||||||| ||||| ||||||| ||||||||||||||||||| |||| |||||||||||||| |||||||| | ||| ||| |
|
|
| T |
2581291 |
cacaaggagtccttcaatatacataatgatggcggcttaacagatgacatttcatcaaaaccacatggaggcatcaactgcgtgtatgattttgtcccca |
2581192 |
T |
|
| Q |
510 |
catcaagtgaaacaatgacaaattccttagcctcaatatcctcccaaacatc |
561 |
Q |
| |
|
|||||||||||||| |||||||| ||||||| ||||| ||||||| |||| |
|
|
| T |
2581191 |
gatcaagtgaaacaacaacaaattcattagccttaatattctcccaaccatc |
2581140 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 38 - 554
Target Start/End: Complemental strand, 2589278 - 2588761
Alignment:
| Q |
38 |
cctttcttcctttcctccaaccatcccacaaatgtcttgacgtgctttctaaatgatagaaaccaagctttcaacaaaaaccttggcagagaaccattgt |
137 |
Q |
| |
|
|||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| ||||||||||||| |
|
|
| T |
2589278 |
cctttctttttttcctctaaccatcccacaaatgtcttgacgtgctttctaaatatcagaaaccaaactttcaacataaaccttggtagagaaccattgt |
2589179 |
T |
|
| Q |
138 |
attggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaattgcccgttgtt-ttgattattagccaatattagtgtatcgttgt |
236 |
Q |
| |
|
||| || |||| ||||||||||||||||||| |||| ||||||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
2589178 |
atttcattgataattctagtccgctttgctgttttattcctcaaattatgtagaattgctcgttgttcttgattattagccaatattagtgtatcgttgt |
2589079 |
T |
|
| Q |
237 |
gatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagtttggtaactaattttaaggagttgagt |
336 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
| T |
2589078 |
gatcagaaaggtgcaatggcaacaattgacaattttccaagtcatcaaaatcatgaaatctagttcgaagattttggtagctaattttaaggagttgagt |
2588979 |
T |
|
| Q |
337 |
ccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaacacaacgaatctttcaatatacataaa |
436 |
Q |
| |
|
|||||||||||||||||||| || | ||||||||||| ||||||||| ||||| | | |||||||||||||||||| || |||||||||||||||||| |
|
|
| T |
2588978 |
ccatggctcttcaactccaatgatcttcatctgccatacaatgaattcagttctccagttatcatgagaaaaacacaaggagtctttcaatatacataaa |
2588879 |
T |
|
| Q |
437 |
gatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaagtgaaacaatgacaaattcct |
536 |
Q |
| |
|
|||| ||||||| | ||||||||||||||||| ||||||||||||||||||| |||||||| ||||| || |||||||||||||| |||||||| | |
|
|
| T |
2588878 |
gatgccggcttaacatatgacatttcatcaaaaccacagggaggcatcaactgcgtgtatgattctgtgccctgatcaagtgaaacaacaacaaattcat |
2588779 |
T |
|
| Q |
537 |
tagcctcaatatcctccc |
554 |
Q |
| |
|
||| || ||||| ||||| |
|
|
| T |
2588778 |
taggcttaatattctccc |
2588761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 224 - 556
Target Start/End: Complemental strand, 2577041 - 2576709
Alignment:
| Q |
224 |
agtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagtttggtaactaattt |
323 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||| |||| || ||||| ||||||||||||||| |
|
|
| T |
2577041 |
agtgtatcgctgtgatcagaaaggtgcaatggcaacaactgaaaatttttcaagtcagcaaaatcatgatatcttgtctgaagattttggtaactaattt |
2576942 |
T |
|
| Q |
324 |
taaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaacacaacgaatcttt |
423 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || | |||||||||||||| |||||| |||||||| |||||||||||||||||||| || || || |
|
|
| T |
2576941 |
taaggagttgagtccatggctcttcaactccaatgatcttcatctgccatataacgaattcagttcttctgtaatcatgagaaaaacacaaggagtcctt |
2576842 |
T |
|
| Q |
424 |
caatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaagtgaaaca |
523 |
Q |
| |
|
|||||||||| |||||| ||||||| ||||||| ||||||||||| || ||||||||||||||||||||| |||| |||| ||| ||||||||||||| |
|
|
| T |
2576841 |
gaatatacatacagatggcggcttaacagatgacgtttcatcaaaaccagagggaggcatcaactgtgtgtgcgactttgttcccatatcaagtgaaaca |
2576742 |
T |
|
| Q |
524 |
atgacaaattccttagcctcaatatcctcccaa |
556 |
Q |
| |
|
|||||||||||||||| || ||||| ||||||| |
|
|
| T |
2576741 |
atgacaaattccttagacttaatattctcccaa |
2576709 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 2584869 - 2584824
Alignment:
| Q |
95 |
agaaaccaagctttcaacaaaaaccttggcagagaaccattgtatt |
140 |
Q |
| |
|
||||||||| ||||||||| || ||||| ||||||||||||||||| |
|
|
| T |
2584869 |
agaaaccaaactttcaacataagccttgacagagaaccattgtatt |
2584824 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 14514969 - 14514925
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaat |
358 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
14514969 |
taactaattttaaggaattgagtccaagaatcttcaactccaaat |
14514925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 292; Significance: 1e-163; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 292; E-Value: 1e-163
Query Start/End: Original strand, 63 - 505
Target Start/End: Original strand, 21642431 - 21642874
Alignment:
| Q |
63 |
ccacaaatgtcttgacgtgctttctaaatgatagaaaccaagctttcaacaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgct |
162 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
| T |
21642431 |
ccacaaatgtcttgacgtgctttctaaatgtcagaaaccaaactttcaacataaaccttggcagagaaccattgtatttcatcgataattctagtccgct |
21642530 |
T |
|
| Q |
163 |
ttgctgtattatccctcaaattatatagaattgcccgttgtt-ttgattattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaa |
261 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
21642531 |
ttgctgtattattcctcaaattatatagaattgctcgttgttcttgattattagccaatattagtgtatcgttgtgatccgaaaggtgcaatggcaacaa |
21642630 |
T |
|
| Q |
262 |
ttgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatt |
361 |
Q |
| |
|
|||||| |||| |||||| |||||||||||| ||||||| |||||| ||||||| |||||||||||||||| |||||| ||||||| |||||||||| || |
|
|
| T |
21642631 |
ttgacatttttccaagtcagcaaaatcatgatatctagtccgaagattttggtagctaattttaaggagttaagtccacggctctttaactccaaatgtt |
21642730 |
T |
|
| Q |
362 |
tccatctgccatataatgaattcggttcttctataatcatgagaaaaacacaacgaatctttcaatatacataaagatggtggcttaatagatgacattt |
461 |
Q |
| |
|
| ||||| ||||||||||||||| |||||| | |||||||||||||||||||| || ||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
21642731 |
ttcatcttccatataatgaattcagttcttttgtaatcatgagaaaaacacaaggagtctttcaatatacataaagatggcagcttaatagatgacattt |
21642830 |
T |
|
| Q |
462 |
catcaaaagcacagggaggcatcaactgtgtgtatgactctgtt |
505 |
Q |
| |
|
|||| ||| || |||||||||||||||| ||||| |||||||| |
|
|
| T |
21642831 |
catccaaaccaaagggaggcatcaactgcgtgtacaactctgtt |
21642874 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 280; E-Value: 1e-156
Query Start/End: Original strand, 67 - 505
Target Start/End: Original strand, 21620765 - 21621204
Alignment:
| Q |
67 |
aaatgtcttgacgtgctttctaaatgatagaaaccaagctttcaacaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgctttgc |
166 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||| |
|
|
| T |
21620765 |
aaatgtcttgacgtgctttctaaatgtcagaaaccaaactttcaacataaaccttggcagagaaccattgtatttcatcgataattctagtccgctttgc |
21620864 |
T |
|
| Q |
167 |
tgtattatccctcaaattatatagaattgcccgttgtt-ttgattattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattga |
265 |
Q |
| |
|
|||||||| ||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
21620865 |
tgtattattcctcaaattatatagaattgctcgttgttcttgattattagccaatattagtgtatcgttgtgctccgaaaggtgcaatggcaacaattga |
21620964 |
T |
|
| Q |
266 |
caatttttcaagtctgcaaaatcatgaaatctagttcgaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttcca |
365 |
Q |
| |
|
|| |||| |||||| |||||||||||| ||||||| |||||| ||||||| |||||||||||||||| |||||| | |||||||||||||||| ||| || |
|
|
| T |
21620965 |
catttttccaagtcagcaaaatcatgatatctagtccgaagattttggtagctaattttaaggagttaagtccacgcctcttcaactccaaatgttttca |
21621064 |
T |
|
| Q |
366 |
tctgccatataatgaattcggttcttctataatcatgagaaaaacacaacgaatctttcaatatacataaagatggtggcttaatagatgacatttcatc |
465 |
Q |
| |
|
||| ||||||||||||||| |||||| | ||||||||||||||||| || || |||||||||||||||||| |||| |||||||||||||||||||||| |
|
|
| T |
21621065 |
tcttccatataatgaattcagttcttttgtaatcatgagaaaaacagaaggagtctttcaatatacataaatatggcagcttaatagatgacatttcatc |
21621164 |
T |
|
| Q |
466 |
aaaagcacagggaggcatcaactgtgtgtatgactctgtt |
505 |
Q |
| |
|
|||| || |||||||||||||||| ||||| |||||||| |
|
|
| T |
21621165 |
aaaaccagagggaggcatcaactgcgtgtacaactctgtt |
21621204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 303 - 378
Target Start/End: Complemental strand, 3625814 - 3625739
Alignment:
| Q |
303 |
gaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataat |
378 |
Q |
| |
|
||||| |||| |||||||||||||| | ||||||||| | ||||||||| |||||| | | ||| ||||||||||| |
|
|
| T |
3625814 |
gaagattttgataactaattttaagaaattgagtccaagactcttcaaccccaaatttcttcatttgccatataat |
3625739 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 291; Significance: 1e-163; HSPs: 4)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 35 - 556
Target Start/End: Complemental strand, 30399472 - 30398951
Alignment:
| Q |
35 |
cctcctttcttcctttcctccaaccatcccacaaatgtcttgacgtgctttctaaatgatagaaaccaagctttcaacaaaaaccttggcagagaaccat |
134 |
Q |
| |
|
||||| ||||||||||| || ||||| | ||||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||| |||||||||| |
|
|
| T |
30399472 |
cctccattcttcctttcatctaaccagcgcacaaatgtcttgacgtgctttctaaatgtcagaaaccaaactttcaacataaaccttggtagagaaccat |
30399373 |
T |
|
| Q |
135 |
tgtattggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaattgcccgttgtt-ttgattattagccaatattagtgtatcgt |
233 |
Q |
| |
|
|||||| ||||||| |||||| | |||| ||||||||| ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||| || |
|
|
| T |
30399372 |
tgtatttcatcgataattctagccaactttactgtattattcctcaaattatatagaattgctcgttgttcttgattattagccaatattagtgtatagt |
30399273 |
T |
|
| Q |
234 |
tgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagtttggtaactaattttaaggagttg |
333 |
Q |
| |
|
||||||| ||||||||||||||||||||||||||||||| |||||| |||||||||||| ||||||| |||||| ||||| | ||||||||||||||||| |
|
|
| T |
30399272 |
tgtgatccgaaaggtgcaatggcaacaattgacaattttccaagtcagcaaaatcatgatatctagtccgaagattttggcagctaattttaaggagttg |
30399173 |
T |
|
| Q |
334 |
agtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaacacaacgaatctttcaatatacat |
433 |
Q |
| |
|
|||||| ||||||||||||| |||| ||| ||||| |||||||||||||| |||||| | ||||||| || ||||||||| || ||||||||||||||| |
|
|
| T |
30399172 |
agtccacggctcttcaactctaaatgttttcatcttccatataatgaatttagttcttttgtaatcattag-aaaacacaaggagtctttcaatatacat |
30399074 |
T |
|
| Q |
434 |
aaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaagtgaaacaatgacaaatt |
533 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||| || |||||||||||| || |||| |||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
30399073 |
aaagatggcagcttaatagatgacatttcatcaaaaccagagggaggcatcatttgcatgtacaactctgttcccatatcaagtgaaacaatgacaaatt |
30398974 |
T |
|
| Q |
534 |
ccttagcctcaatatcctcccaa |
556 |
Q |
| |
|
||||||||| ||||| ||||||| |
|
|
| T |
30398973 |
ccttagccttaatattctcccaa |
30398951 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 6921351 - 6921395
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaat |
358 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
6921351 |
taactaattttaaggaattgagtccaagattcttcaactccaaat |
6921395 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 358
Target Start/End: Original strand, 6947881 - 6947925
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaat |
358 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||||||||||| |
|
|
| T |
6947881 |
taactaattttaaggaattgagtccaagattcttcaactccaaat |
6947925 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 20770719 - 20770675
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaat |
358 |
Q |
| |
|
|||||||||||||||| |||| |||||| |||||||| ||||||| |
|
|
| T |
20770719 |
taactaattttaaggaattgaatccatgactcttcaattccaaat |
20770675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 11)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 52 - 553
Target Start/End: Complemental strand, 46769703 - 46769204
Alignment:
| Q |
52 |
ctccaaccatcccacaaatgtcttgacgtgctttctaaatgatagaaaccaagctttcaacaaaaaccttggcagagaaccattgtattggatcgatagt |
151 |
Q |
| |
|
||||| ||||||||||||||||||||| ||||||||||||| |||||| || |||||||| ||||||||||||||||||| |||||| || |||| | |
|
|
| T |
46769703 |
ctccagccatcccacaaatgtcttgacatgctttctaaatgtaagaaacaaaactttcaacgtaaaccttggcagagaaccaatgtatttcattgataat |
46769604 |
T |
|
| Q |
152 |
tctagtccgctttgctgtattatccctcaaattatatagaattgcccgttgtt-ttgattattagccaatattagtgtatcgttgtgatcagaaaggtgc |
250 |
Q |
| |
|
| |||| | |||||||||||||||||||||||||||||||||||| || |||| |||||| || ||||||||| ||||||| | |||||| |||||||| |
|
|
| T |
46769603 |
tttagttctctttgctgtattatccctcaaattatatagaattgctcgctgttcttgattgttggccaatattcgtgtatcactttgatcataaaggtgc |
46769504 |
T |
|
| Q |
251 |
aatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagtttggtaactaattttaaggagttgagtccatggctcttcaa |
350 |
Q |
| |
|
|||||| |||| ||||||| || |||||| |||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||| |||||||||| |
|
|
| T |
46769503 |
aatggcgacaactgacaatattccaagtcagcaaaatcatgaaatctagtccgaagattttggtaactaattttaagaagttgagtccaaggctcttcaa |
46769404 |
T |
|
| Q |
351 |
ctccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaacacaacgaatctttcaatatacataaagatggtggcttaat |
450 |
Q |
| |
|
|||| ||||||| ||||||||| ||||||||||| |||||| | ||||||||||||| ||||| || | ||||||||||||| ||| ||||||| |
|
|
| T |
46769403 |
ctccgaatattttcatctgccacataatgaattcagttcttttgaaatcatgagaaaagcacaaggagcccttcaatatacatacaga---cggcttaac |
46769307 |
T |
|
| Q |
451 |
agatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaagtgaaacaatgacaaattccttagcctcaatatcc |
550 |
Q |
| |
|
| |||||||||||||||| ||| |||||||||||| | ||| |||| | ||||||| || |||||||||||| ||||||||||||||| ||||| | |
|
|
| T |
46769306 |
atttgacatttcatcaaaaccacgaggaggcatcaaccgcgtgaatgattttgtttccgtataaagtgaaacaatcgcaaattccttagccttaatattc |
46769207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 212 - 533
Target Start/End: Complemental strand, 36260424 - 36260106
Alignment:
| Q |
212 |
ttagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagttt |
311 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||| ||| | || || |||||| |||| || || | || | |||||| ||| |
|
|
| T |
36260424 |
ttagccaatattagtgtatcaccatgatcagaaaggtgcaatggcaaccatttagaaagttccaagtcaacaaagccacgatgtatactccgaagatttt |
36260325 |
T |
|
| Q |
312 |
ggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaaca |
411 |
Q |
| |
|
| || |||||||||| |||||| |||| | |||||||||||||||| |||||||| |||||||| || || ||| | | ||||||| |||||| || |
|
|
| T |
36260324 |
gatagctaattttaataagttgaatccaagactcttcaactccaaattcttccatcttccatataacaaaatcagttttcttgtaatcattagaaaagca |
36260225 |
T |
|
| Q |
412 |
caacgaatctttcaatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccaca |
511 |
Q |
| |
|
| |||| ||||||||||| ||||| || ||||| |||||||||||||||| | || ||||||||||||| |||||||| ||||||||||| | |
|
|
| T |
36260224 |
aagacaatccaacaatatacataccgatgg---ctcaataggtgacatttcatcaaaaccgcaaggaggcatcaactttgtgtatgtctctgtttccaga |
36260128 |
T |
|
| Q |
512 |
tcaagtgaaacaatgacaaatt |
533 |
Q |
| |
|
|||||||||||||| ||||||| |
|
|
| T |
36260127 |
tcaagtgaaacaatcacaaatt |
36260106 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 317 - 538
Target Start/End: Complemental strand, 36263119 - 36262901
Alignment:
| Q |
317 |
ctaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggttcttctataatcatgagaaaaacacaacg |
416 |
Q |
| |
|
|||| ||||| |||||||||||| | |||||||||||||||| |||||||| |||||||| || || ||| | |||| |||| |||||| || | |
|
|
| T |
36263119 |
ctaactttaatgagttgagtccaagactcttcaactccaaattcttccatcttccatataacaaaatcagttttcttatagtcattagaaaagcaaagac |
36263020 |
T |
|
| Q |
417 |
aatctttcaatatacataaagatggtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaag |
516 |
Q |
| |
|
| || |||||||||||| ||||| || || || |||||||||||||||| |||| |||||||| ||||||||||| ||||||| | | ||||| |
|
|
| T |
36263019 |
agtccatcaatatacatattgatgg---ctcaacaggtgacatttcatcaaaaccacacggaggcattggctgtgtgtatgtctctgttcctagatcaaa |
36262923 |
T |
|
| Q |
517 |
tgaaacaatgacaaattcctta |
538 |
Q |
| |
|
||||||||| ||||| |||||| |
|
|
| T |
36262922 |
tgaaacaatcacaaagtcctta |
36262901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 378
Target Start/End: Original strand, 19604462 - 19604528
Alignment:
| Q |
312 |
ggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataat |
378 |
Q |
| |
|
|||||||||||||||||| ||||||||| | ||||||||||||||| | ||||||||||||||| |
|
|
| T |
19604462 |
ggtaactaattttaaggaattgagtccaggagtcttcaactccaaattccttcatctgccatataat |
19604528 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 36255446 - 36255372
Alignment:
| Q |
303 |
gaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataa |
377 |
Q |
| |
|
||||| |||| || |||| ||||| |||||||||||| | |||||||||||||||| ||||||| | |||||||| |
|
|
| T |
36255446 |
gaagattttgatagctaactttaatgagttgagtccaagactcttcaactccaaatttttccattttccatataa |
36255372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 309 - 374
Target Start/End: Complemental strand, 29106888 - 29106823
Alignment:
| Q |
309 |
tttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccata |
374 |
Q |
| |
|
|||||||||||||||||| ||||||||||| | ||||||||| |||||| | | ||||||||||| |
|
|
| T |
29106888 |
tttggtaactaattttaaaaagttgagtccaagactcttcaaccccaaatttcttcatctgccata |
29106823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 458 - 538
Target Start/End: Complemental strand, 36255294 - 36255214
Alignment:
| Q |
458 |
atttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaagtgaaacaatgacaaattcctta |
538 |
Q |
| |
|
|||||||||||| ||| |||||||||| ||| ||||||| ||||||| ||| |||||| | |||||| ||||| |||||| |
|
|
| T |
36255294 |
atttcatcaaaaccacgcggaggcatcagctgcgtgtatgtctctgttcccagatcaagcgcaacaatcacaaagtcctta |
36255214 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 314 - 377
Target Start/End: Original strand, 660848 - 660911
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataa |
377 |
Q |
| |
|
|||||||||||||||| ||||||||| | ||||||||||| |||| | |||||||||||||| |
|
|
| T |
660848 |
taactaattttaaggaattgagtccaagactcttcaactcgaaattccttcatctgccatataa |
660911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 196
Target Start/End: Complemental strand, 36260578 - 36260477
Alignment:
| Q |
95 |
agaaaccaagctttcaacaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaatt |
194 |
Q |
| |
|
||||||||||||||||||| || ||||| || ||||||||| ||| |||| || ||||||| || ||| ||||||| ||||| |||||||||||| |
|
|
| T |
36260578 |
agaaaccaagctttcaacataagccttgacaaagaaccattttatcttatcggtaattctagtttgcaccgctatattatctctcaagttatatagaatt |
36260479 |
T |
|
| Q |
195 |
gc |
196 |
Q |
| |
|
|| |
|
|
| T |
36260478 |
gc |
36260477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 303 - 375
Target Start/End: Original strand, 18997588 - 18997660
Alignment:
| Q |
303 |
gaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatat |
375 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||| | || |||||||||||| | |||||||||||| |
|
|
| T |
18997588 |
gaagagttaggtaactaattttaaggaactgagtccaggacttgtcaactccaaattccttcatctgccatat |
18997660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 20352164 - 20352120
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaat |
358 |
Q |
| |
|
||||||||||||| ||||||||||||| ||||||||||||||| |
|
|
| T |
20352164 |
taactaattttaaaaagttgagtccatgaatcttcaactccaaat |
20352120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 64; Significance: 1e-27; HSPs: 8)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 95 - 377
Target Start/End: Complemental strand, 35767307 - 35767024
Alignment:
| Q |
95 |
agaaaccaagctttcaacaaaaaccttggcagagaaccattgtattggatcgatagttctagtccgctttgctgtattatccctcaaattatatagaatt |
194 |
Q |
| |
|
||||||||||||||| ||| ||||||||| ||||||||| |||||| ||| |||||||||| ||| |||| |||||| |||||||||||||||||| |
|
|
| T |
35767307 |
agaaaccaagctttcgacataaaccttggtagagaaccagtgtattctatcagtagttctagttcgcactgctccattatctctcaaattatatagaatt |
35767208 |
T |
|
| Q |
195 |
gcccgttgtt-ttgattattagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaa |
293 |
Q |
| |
|
|| ||| || || || |||||||||||||||||||| |||||||||||||| |||||||| || ||| ||||| |||||| || ||| | |
|
|
| T |
35767207 |
gcttgttcttcttccttgttagccaatattagtgtatcaccatgatcagaaaggtgtaatggcaagaactgagaatttcgcaagtcataaacgtcaaaat |
35767108 |
T |
|
| Q |
294 |
atctagttcgaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataa |
377 |
Q |
| |
|
| || | ||||| |||| || ||||||||||||||||| |||| | |||||||||||||||| |||||||| |||||||| |
|
|
| T |
35767107 |
acatactcagaagattttgatagttaattttaaggagttgaatccaagactcttcaactccaaattcttccatcttccatataa |
35767024 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 441 - 538
Target Start/End: Complemental strand, 19359082 - 19358985
Alignment:
| Q |
441 |
gtggcttaatagatgacatttcatcaaaagcacagggaggcatcaactgtgtgtatgactctgtttccacatcaagtgaaacaatgacaaattcctta |
538 |
Q |
| |
|
||||||||||| |||||| |||| |||| |||| ||||||||||||| |||||||| || |||| || ||||||||||||||| ||||||| |||| |
|
|
| T |
19359082 |
gtggcttaataagtgacatgtcataaaaaccacaaggaggcatcaactttgtgtatgtctttgttccctaatcaagtgaaacaatcacaaatttctta |
19358985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 314 - 388
Target Start/End: Original strand, 3560959 - 3561033
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggtt |
388 |
Q |
| |
|
|||||||||||||| | ||||||||| | ||||||||| |||||| ||| ||||||||| ||||| || |||||| |
|
|
| T |
3560959 |
taactaattttaagaaattgagtccaagactcttcaaccccaaattttttcatctgccaaataataaaatcggtt |
3561033 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 368
Target Start/End: Complemental strand, 19359308 - 19359152
Alignment:
| Q |
212 |
ttagccaatattagtgtatcgttgtgatcagaaaggtgcaatggcaacaattgacaatttttcaagtctgcaaaatcatgaaatctagttcgaagagttt |
311 |
Q |
| |
|
||||||||||| |||||||| |||||||||||||| ||||| ||| ||| | || ||||||||| |||| ||| || | || | ||||| ||| |
|
|
| T |
19359308 |
ttagccaatatgagtgtatcaccatgatcagaaaggtgaaatggtaaccatttagaaagtttcaagtcaacaaagtcacgatgtatactctgaagatttt |
19359209 |
T |
|
| Q |
312 |
ggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatct |
368 |
Q |
| |
|
| || |||||||||| ||||||||||| | |||||||||||||||| |||||||| |
|
|
| T |
19359208 |
gatacctaattttaataagttgagtccaagactcttcaactccaaattcttccatct |
19359152 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 314 - 358
Target Start/End: Complemental strand, 53774909 - 53774865
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaat |
358 |
Q |
| |
|
|||||||||||||||| ||||||||| | |||||||||||||||| |
|
|
| T |
53774909 |
taactaattttaaggaattgagtccaagactcttcaactccaaat |
53774865 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 314 - 388
Target Start/End: Complemental strand, 3565813 - 3565739
Alignment:
| Q |
314 |
taactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataatgaattcggtt |
388 |
Q |
| |
|
|||||||||||||| | ||||||||| | ||||||||| |||||| | ||||||||||||||| || |||||| |
|
|
| T |
3565813 |
taactaattttaagaaattgagtccaagactcttcaaccccaaattccttcatctgccatataataaaatcggtt |
3565739 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 303 - 377
Target Start/End: Complemental strand, 19361522 - 19361448
Alignment:
| Q |
303 |
gaagagtttggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataa |
377 |
Q |
| |
|
||||| |||| || |||||||||| |||||||||||| |||||||||| ||||| |||||||| |||||||| |
|
|
| T |
19361522 |
gaagattttgatacctaattttaatgagttgagtccaaaactcttcaacttcaaattattccatcttccatataa |
19361448 |
T |
|
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Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 140
Target Start/End: Complemental strand, 19359462 - 19359417
Alignment:
| Q |
95 |
agaaaccaagctttcaacaaaaaccttggcagagaaccattgtatt |
140 |
Q |
| |
|
||||||||||||||||||| || ||||| |||||||||||| |||| |
|
|
| T |
19359462 |
agaaaccaagctttcaacataagccttgacagagaaccattttatt |
19359417 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 31; Significance: 0.00000006; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 311 - 377
Target Start/End: Original strand, 4014963 - 4015029
Alignment:
| Q |
311 |
tggtaactaattttaaggagttgagtccatggctcttcaactccaaatatttccatctgccatataa |
377 |
Q |
| |
|
|||||||||| |||||||| ||||||||| | |||||||| |||||| | | |||||||||||||| |
|
|
| T |
4014963 |
tggtaactaactttaaggaattgagtccaagaatcttcaaccccaaatttcttcatctgccatataa |
4015029 |
T |
|
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