View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13977_high_2 (Length: 528)

Name: NF13977_high_2
Description: NF13977
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13977_high_2
NF13977_high_2
[»] chr3 (30 HSPs)
chr3 (17-519)||(41659042-41659548)
chr3 (476-519)||(14182630-14182673)
chr3 (476-519)||(43429778-43429821)
chr3 (474-519)||(31416456-31416501)
chr3 (475-511)||(11884474-11884510)
chr3 (476-519)||(6230899-6230942)
chr3 (476-519)||(13330743-13330786)
chr3 (476-519)||(17320817-17320860)
chr3 (476-510)||(37919129-37919163)
chr3 (476-518)||(39653731-39653773)
chr3 (476-507)||(293777-293808)
chr3 (484-519)||(4164485-4164520)
chr3 (475-518)||(5230854-5230897)
chr3 (476-519)||(11360546-11360589)
chr3 (476-519)||(11517691-11517734)
chr3 (476-519)||(12019814-12019857)
chr3 (476-519)||(12950459-12950502)
chr3 (476-519)||(22637222-22637265)
chr3 (476-519)||(34557759-34557802)
chr3 (476-519)||(38378409-38378452)
chr3 (476-519)||(38815700-38815743)
chr3 (476-518)||(15548398-15548440)
chr3 (476-518)||(40041802-40041844)
chr3 (476-518)||(55513939-55513981)
chr3 (476-509)||(8687761-8687794)
chr3 (476-509)||(9039630-9039663)
chr3 (475-519)||(15552137-15552181)
chr3 (476-520)||(17761040-17761084)
chr3 (476-520)||(19062360-19062404)
chr3 (475-519)||(24902123-24902167)
[»] scaffold0480 (1 HSPs)
scaffold0480 (475-519)||(11240-11284)
[»] scaffold0133 (1 HSPs)
scaffold0133 (475-519)||(3922-3966)
[»] chr8 (28 HSPs)
chr8 (475-519)||(19334250-19334294)
chr8 (475-519)||(20707677-20707721)
chr8 (475-519)||(22499545-22499589)
chr8 (476-518)||(11541895-11541937)
chr8 (475-520)||(22725674-22725719)
chr8 (476-519)||(5851390-5851433)
chr8 (476-519)||(17499747-17499790)
chr8 (476-519)||(24554816-24554859)
chr8 (476-519)||(27233434-27233477)
chr8 (476-519)||(33170141-33170184)
chr8 (476-518)||(22883680-22883722)
chr8 (476-518)||(26009321-26009363)
chr8 (476-510)||(29295769-29295803)
chr8 (478-519)||(18043392-18043433)
chr8 (478-519)||(23119081-23119122)
chr8 (478-518)||(11599965-11600005)
chr8 (475-519)||(21234268-21234312)
chr8 (476-519)||(15931213-15931256)
chr8 (476-511)||(18120645-18120680)
chr8 (476-519)||(18263644-18263687)
chr8 (476-519)||(24236922-24236965)
chr8 (476-510)||(17264388-17264422)
chr8 (476-518)||(21192969-21193011)
chr8 (476-518)||(23833156-23833198)
chr8 (474-519)||(18770375-18770420)
chr8 (474-519)||(39449059-39449104)
chr8 (478-518)||(17283127-17283167)
chr8 (475-519)||(17731774-17731818)
[»] chr7 (37 HSPs)
chr7 (475-519)||(3194260-3194304)
chr7 (476-519)||(14938598-14938641)
chr7 (476-519)||(15366191-15366234)
chr7 (476-519)||(21677736-21677779)
chr7 (476-518)||(17926734-17926776)
chr7 (479-519)||(20587860-20587900)
chr7 (476-519)||(9058860-9058903)
chr7 (476-519)||(9323298-9323341)
chr7 (476-519)||(14303085-14303128)
chr7 (476-519)||(16381803-16381846)
chr7 (476-519)||(17948266-17948309)
chr7 (476-519)||(28388355-28388398)
chr7 (476-519)||(31499135-31499178)
chr7 (476-519)||(34243380-34243423)
chr7 (476-518)||(15305335-15305377)
chr7 (476-518)||(15980753-15980795)
chr7 (476-510)||(48345478-48345512)
chr7 (476-516)||(9640942-9640982)
chr7 (475-519)||(14279143-14279187)
chr7 (476-519)||(3135056-3135099)
chr7 (476-519)||(4444176-4444219)
chr7 (476-511)||(5617346-5617381)
chr7 (476-519)||(12182130-12182173)
chr7 (476-519)||(16370603-16370646)
chr7 (476-511)||(16487359-16487394)
chr7 (476-519)||(16915539-16915582)
chr7 (476-519)||(18081538-18081581)
chr7 (476-519)||(18366256-18366299)
chr7 (476-519)||(18921294-18921337)
chr7 (476-519)||(19380852-19380895)
chr7 (476-519)||(39294393-39294436)
chr7 (476-510)||(9609134-9609168)
chr7 (476-510)||(9836706-9836740)
chr7 (480-518)||(12245586-12245624)
chr7 (476-518)||(19065155-19065197)
chr7 (475-519)||(25122069-25122113)
chr7 (476-516)||(28717935-28717975)
[»] chr5 (20 HSPs)
chr5 (475-519)||(3421072-3421116)
chr5 (476-519)||(11963147-11963190)
chr5 (474-519)||(6454592-6454637)
chr5 (478-519)||(28887783-28887824)
chr5 (475-518)||(5453571-5453614)
chr5 (476-519)||(16837974-16838017)
chr5 (476-511)||(23236657-23236692)
chr5 (476-519)||(24082005-24082048)
chr5 (476-510)||(11765960-11765994)
chr5 (475-509)||(19871803-19871837)
chr5 (476-518)||(22879787-22879829)
chr5 (457-510)||(33628802-33628855)
chr5 (475-519)||(14345909-14345953)
chr5 (476-519)||(12030115-12030158)
chr5 (476-519)||(22056090-22056133)
chr5 (476-519)||(29911937-29911980)
chr5 (476-519)||(37985731-37985774)
chr5 (476-518)||(13793026-13793068)
chr5 (475-519)||(430686-430730)
chr5 (478-518)||(23411879-23411919)
[»] chr4 (29 HSPs)
chr4 (475-519)||(13449253-13449297)
chr4 (475-519)||(42706674-42706718)
chr4 (475-519)||(50224397-50224441)
chr4 (476-519)||(12370677-12370720)
chr4 (476-518)||(15216401-15216443)
chr4 (475-519)||(12729296-12729340)
chr4 (474-518)||(15853524-15853568)
chr4 (476-520)||(17378429-17378473)
chr4 (475-519)||(19557222-19557266)
chr4 (476-519)||(18241428-18241471)
chr4 (476-518)||(12136525-12136567)
chr4 (469-519)||(14867262-14867312)
chr4 (476-518)||(24236830-24236872)
chr4 (480-518)||(41168157-41168195)
chr4 (478-519)||(41919488-41919529)
chr4 (476-516)||(13596263-13596303)
chr4 (476-511)||(5407062-5407097)
chr4 (475-518)||(7966843-7966886)
chr4 (476-519)||(10239681-10239724)
chr4 (476-511)||(12338912-12338947)
chr4 (476-511)||(18274701-18274736)
chr4 (476-519)||(18496716-18496759)
chr4 (476-519)||(31113600-31113643)
chr4 (476-519)||(47470575-47470618)
chr4 (476-510)||(19624283-19624317)
chr4 (476-518)||(54366290-54366332)
chr4 (476-517)||(41258622-41258663)
chr4 (475-519)||(14503779-14503823)
chr4 (476-516)||(38762670-38762710)
[»] scaffold1068 (1 HSPs)
scaffold1068 (476-519)||(1210-1253)
[»] scaffold0409 (2 HSPs)
scaffold0409 (476-519)||(3058-3101)
scaffold0409 (476-519)||(11313-11356)
[»] scaffold0385 (1 HSPs)
scaffold0385 (476-519)||(12705-12748)
[»] scaffold0148 (1 HSPs)
scaffold0148 (476-519)||(35814-35857)
[»] scaffold0020 (1 HSPs)
scaffold0020 (476-519)||(103876-103919)
[»] scaffold0003 (1 HSPs)
scaffold0003 (476-519)||(99037-99080)
[»] chr6 (28 HSPs)
chr6 (476-519)||(6092419-6092462)
chr6 (476-519)||(15006870-15006913)
chr6 (476-519)||(17085789-17085832)
chr6 (476-519)||(19670426-19670469)
chr6 (476-519)||(34964822-34964865)
chr6 (475-519)||(16890048-16890092)
chr6 (475-519)||(17858608-17858652)
chr6 (476-519)||(12311244-12311287)
chr6 (476-519)||(16373877-16373920)
chr6 (476-519)||(22364475-22364518)
chr6 (476-519)||(22595901-22595944)
chr6 (476-519)||(22846013-22846056)
chr6 (476-519)||(23025077-23025120)
chr6 (476-519)||(31469752-31469795)
chr6 (476-518)||(21929332-21929374)
chr6 (476-518)||(29163157-29163199)
chr6 (475-519)||(941272-941316)
chr6 (475-511)||(22468323-22468359)
chr6 (476-519)||(14150468-14150511)
chr6 (475-518)||(16131146-16131189)
chr6 (476-519)||(17375952-17375995)
chr6 (479-518)||(18017713-18017752)
chr6 (476-507)||(21927493-21927524)
chr6 (476-519)||(25782599-25782642)
chr6 (476-519)||(25917579-25917622)
chr6 (476-518)||(17791403-17791445)
chr6 (475-519)||(15081093-15081137)
chr6 (475-519)||(25369680-25369724)
[»] chr2 (17 HSPs)
chr2 (476-519)||(24271938-24271981)
chr2 (478-520)||(19643763-19643805)
chr2 (475-519)||(19436160-19436204)
chr2 (476-519)||(6092343-6092386)
chr2 (476-519)||(19647975-19648018)
chr2 (476-519)||(24381661-24381704)
chr2 (476-518)||(25303476-25303518)
chr2 (476-518)||(25593128-25593170)
chr2 (476-518)||(32738356-32738398)
chr2 (476-518)||(45620681-45620723)
chr2 (476-517)||(43640240-43640281)
chr2 (476-519)||(9783106-9783149)
chr2 (476-519)||(20021763-20021806)
chr2 (476-519)||(30995221-30995264)
chr2 (476-519)||(32463805-32463848)
chr2 (476-519)||(34875919-34875962)
chr2 (475-507)||(20270819-20270851)
[»] chr1 (16 HSPs)
chr1 (476-519)||(21193051-21193094)
chr1 (476-519)||(40555265-40555308)
chr1 (476-519)||(50002186-50002229)
chr1 (475-522)||(52397549-52397596)
chr1 (476-518)||(17606816-17606858)
chr1 (473-519)||(21041679-21041725)
chr1 (476-519)||(78732-78775)
chr1 (476-519)||(18164101-18164144)
chr1 (476-519)||(20957269-20957312)
chr1 (476-518)||(25090964-25091006)
chr1 (476-518)||(27672677-27672719)
chr1 (474-519)||(46143666-46143711)
chr1 (475-519)||(21223611-21223655)
chr1 (475-519)||(37236198-37236242)
chr1 (475-510)||(20191652-20191687)
chr1 (476-519)||(29217047-29217090)
[»] scaffold0561 (1 HSPs)
scaffold0561 (476-518)||(4983-5025)
[»] scaffold0357 (1 HSPs)
scaffold0357 (478-519)||(5649-5690)
[»] scaffold0032 (3 HSPs)
scaffold0032 (474-519)||(106850-106895)
scaffold0032 (476-517)||(122190-122231)
scaffold0032 (475-519)||(102036-102080)
[»] scaffold0387 (1 HSPs)
scaffold0387 (471-519)||(3266-3314)
[»] scaffold0006 (1 HSPs)
scaffold0006 (476-516)||(199586-199626)
[»] scaffold1949 (1 HSPs)
scaffold1949 (476-519)||(1091-1134)
[»] scaffold0442 (2 HSPs)
scaffold0442 (476-519)||(2211-2254)
scaffold0442 (476-519)||(14348-14391)
[»] scaffold0175 (1 HSPs)
scaffold0175 (476-511)||(7426-7461)
[»] scaffold0107 (1 HSPs)
scaffold0107 (475-518)||(11326-11369)
[»] scaffold0090 (1 HSPs)
scaffold0090 (476-519)||(7381-7424)
[»] scaffold0086 (1 HSPs)
scaffold0086 (476-519)||(34385-34428)
[»] scaffold0031 (1 HSPs)
scaffold0031 (476-519)||(99431-99474)
[»] scaffold0028 (1 HSPs)
scaffold0028 (476-519)||(70540-70583)
[»] scaffold0009 (1 HSPs)
scaffold0009 (476-519)||(99182-99225)
[»] scaffold0004 (1 HSPs)
scaffold0004 (476-519)||(84314-84357)
[»] scaffold0001 (1 HSPs)
scaffold0001 (476-519)||(141494-141537)
[»] scaffold0725 (1 HSPs)
scaffold0725 (476-518)||(6976-7018)
[»] scaffold0503 (1 HSPs)
scaffold0503 (473-519)||(9246-9292)
[»] scaffold0047 (2 HSPs)
scaffold0047 (476-518)||(2359-2401)
scaffold0047 (476-518)||(73525-73567)
[»] scaffold0017 (1 HSPs)
scaffold0017 (476-518)||(10175-10217)
[»] scaffold0601 (1 HSPs)
scaffold0601 (476-509)||(3626-3659)
[»] scaffold0329 (1 HSPs)
scaffold0329 (476-517)||(1012-1053)
[»] scaffold0258 (1 HSPs)
scaffold0258 (478-519)||(8197-8238)
[»] scaffold0174 (2 HSPs)
scaffold0174 (474-519)||(22801-22846)
scaffold0174 (476-511)||(464-499)
[»] scaffold0219 (1 HSPs)
scaffold0219 (475-511)||(26265-26301)
[»] scaffold0013 (1 HSPs)
scaffold0013 (476-508)||(33367-33399)
[»] scaffold0557 (1 HSPs)
scaffold0557 (476-519)||(458-501)
[»] scaffold0456 (1 HSPs)
scaffold0456 (476-519)||(12895-12938)
[»] scaffold0331 (1 HSPs)
scaffold0331 (483-518)||(6175-6210)
[»] scaffold0231 (2 HSPs)
scaffold0231 (476-519)||(16094-16137)
scaffold0231 (476-518)||(15581-15623)
[»] scaffold0193 (1 HSPs)
scaffold0193 (476-519)||(2833-2876)
[»] scaffold0165 (1 HSPs)
scaffold0165 (476-519)||(20036-20079)
[»] scaffold0151 (1 HSPs)
scaffold0151 (476-519)||(31885-31928)
[»] scaffold0112 (1 HSPs)
scaffold0112 (476-519)||(4784-4827)
[»] scaffold0066 (2 HSPs)
scaffold0066 (476-519)||(43796-43839)
scaffold0066 (476-519)||(51966-52009)
[»] scaffold0057 (1 HSPs)
scaffold0057 (478-509)||(3854-3885)
[»] scaffold0216 (1 HSPs)
scaffold0216 (484-518)||(23350-23384)
[»] scaffold0092 (1 HSPs)
scaffold0092 (476-518)||(1227-1269)
[»] scaffold0025 (1 HSPs)
scaffold0025 (476-518)||(2377-2419)
[»] scaffold0010 (1 HSPs)
scaffold0010 (476-518)||(28994-29036)
[»] scaffold0236 (1 HSPs)
scaffold0236 (474-519)||(25609-25654)
[»] scaffold0161 (1 HSPs)
scaffold0161 (477-510)||(25281-25314)
[»] scaffold0095 (1 HSPs)
scaffold0095 (474-519)||(7902-7947)
[»] scaffold0121 (1 HSPs)
scaffold0121 (471-519)||(6867-6915)
[»] scaffold0042 (1 HSPs)
scaffold0042 (475-519)||(75062-75106)


Alignment Details
Target: chr3 (Bit Score: 372; Significance: 0; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 372; E-Value: 0
Query Start/End: Original strand, 17 - 519
Target Start/End: Original strand, 41659042 - 41659548
Alignment:
Q  17 agaacacactccaatacggtcataagaaccaaacaatactttttcattataatcatgacgaacaccaccgcaagtcgatatgtccccatggttagtcaat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||    
T  41659042 agaacacactccaatacggtcataagaaccaaacaatactttttcattataatcacgacgaacaccaccacaagttgatatgtccccatggttagtcaat 41659141  T
Q  117 gtaacatccccattcaacttgatctaaactaaattacaacgaatccaacatatgggagaggaattgtcgttaacatgaaatatatttgtcttgataaaca 216  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  41659142 gtaacatccccattcaacttgatctaaactaaattacaatgaacccaacatatgggagaggaattgtcgttaacatgatatatatttgtcttgataaaca 41659241  T
Q  217 tagtattcatgatgggagtcttcaaatgacttattctcaaacaagggtgt-----------------tagccaagtaaacttagccaccgagataggaaa 299  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||                 |||||||||||||||||||||||||||||||||    
T  41659242 tagtattcatgatgggaatcttcaaatgacttattctcaaacaagggtgttagccaagtttacttagtagccaagtaaacttagccaccgagataggaaa 41659341  T
Q  300 catggtcaccaaggagggaagcttaaccatgaggtttacttataagccagtaagtaaagagaagggagtttcttacccatcgaaatcactcggtcacgaa 399  Q
    |||||||||||||||||             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41659342 catggtcaccaaggagg-------------gaggtttacttataagccagtaagtaaagagaagggagtttcttacccatcgaaatcactcggtcacgaa 41659428  T
Q  400 gatgctttactcgtgaagcaaggaaacttgatcatgaagtaaagaaagataatcacatataaatataggtgatatatgtaacgccctatttctattaaag 499  Q
    ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||    
T  41659429 gatactttactcgtgaagcaaggaaacttgatcatgaagtaaagaaagataaccacatataaatatatgtgatatatataacgccctatttctattaaag 41659528  T
Q  500 cgataaaacacgagaataat 519  Q
     |||||||||||||||||||    
T  41659529 tgataaaacacgagaataat 41659548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 14182673 - 14182630
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  14182673 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 14182630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 43429821 - 43429778
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  43429821 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 43429778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 31416501 - 31416456
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  31416501 tatgtaacgccctgtttctattaaagcgataaaacacgcgaataat 31416456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 11884510 - 11884474
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||||||||||||||||||||||||||||||||    
T  11884510 atgtaacgccctatttctattaaagcgataaaacacg 11884474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 6230942 - 6230899
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  6230942 tgtaacgccctatttctattaaagcgataaaacatgcgaataat 6230899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 13330743 - 13330786
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  13330743 tgtaacgccctacttctattaaagcgataaaacacgcgaataat 13330786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 17320860 - 17320817
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||||| |||||||    
T  17320860 tgtaacgccctatttctattaaagcaataaaacacgcgaataat 17320817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 510
Target Start/End: Complemental strand, 37919163 - 37919129
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||||||||||||||||||||||||||||||||||    
T  37919163 tgtaacgccctatttctattaaagcgataaaacac 37919129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 39653731 - 39653773
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  39653731 tgtaacgccctatttctattaaagcgataaaactcgcgaataa 39653773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Original strand, 293777 - 293808
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaa 507  Q
    ||||||||||||||||||||||||||||||||    
T  293777 tgtaacgccctatttctattaaagcgataaaa 293808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 519
Target Start/End: Complemental strand, 4164520 - 4164485
Alignment:
Q  484 cctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||| |||||||    
T  4164520 cctatttctattaaagcgataaaacacgcgaataat 4164485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 5230897 - 5230854
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||| || ||||||||||| ||||||    
T  5230897 atgtaacgccctatttctattacagtgataaaacacgcgaataa 5230854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 11360546 - 11360589
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||| ||||||||||||||||||||||| |||||||    
T  11360546 tgtaacgtcctacttctattaaagcgataaaacacgcgaataat 11360589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 11517734 - 11517691
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||| ||||| |||||||    
T  11517734 tgtaacgccatatttctattaaagcgataatacacgcgaataat 11517691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 12019814 - 12019857
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||  ||||||||| |||||||    
T  12019814 tgtaacgccctatttctattaaagcagtaaaacacgcgaataat 12019857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 12950459 - 12950502
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| |||||||||||||||| |||||||||||| |||||||    
T  12950459 tgtaacaccctatttctattaaaacgataaaacacgcgaataat 12950502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 22637222 - 22637265
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| ||||||||||||||| |||||||||| |||||||    
T  22637222 tgtaacgccatatttctattaaagcaataaaacacgcgaataat 22637265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 34557759 - 34557802
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||    
T  34557759 tgtaacgtcctatttctattaaaacgataaaacacgcgaataat 34557802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 38378452 - 38378409
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||  |||||||    
T  38378452 tgtaacaccctatttctattaaagcgataaaacacacgaataat 38378409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 38815743 - 38815700
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||||||||  |||||||    
T  38815743 tgtaacgccttatttctattaaagcgataaaacacacgaataat 38815700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 15548398 - 15548440
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||    
T  15548398 tgtaacgccttatttctattaatgcgataaaacacgcgaataa 15548440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 40041844 - 40041802
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||| |||||||| ||||||||||| ||||||    
T  40041844 tgtaacgccctatttatattaaagtgataaaacacgcgaataa 40041802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 55513981 - 55513939
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| || |||||||||||||||||||||||||| ||||||    
T  55513981 tgtaacaccttatttctattaaagcgataaaacacgcgaataa 55513939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 8687761 - 8687794
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaaca 509  Q
    |||||||||||| |||||||||||||||||||||    
T  8687761 tgtaacgccctacttctattaaagcgataaaaca 8687794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 509
Target Start/End: Original strand, 9039630 - 9039663
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaaca 509  Q
    |||||||||||| |||||||||||||||||||||    
T  9039630 tgtaacgccctacttctattaaagcgataaaaca 9039663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 15552181 - 15552137
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||| |||||||||||| ||||||||  |||||||    
T  15552181 atgtaacgccctatctctattaaagcggtaaaacacacgaataat 15552137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 476 - 520
Target Start/End: Complemental strand, 17761084 - 17761040
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataatc 520  Q
    |||||||||||||  |||||||| |||||||||||| ||||||||    
T  17761084 tgtaacgccctatccctattaaatcgataaaacacgcgaataatc 17761040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 476 - 520
Target Start/End: Complemental strand, 19062404 - 19062360
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataatc 520  Q
    |||||||||||||  |||||||| |||||||||||| ||||||||    
T  19062404 tgtaacgccctatccctattaaatcgataaaacacgcgaataatc 19062360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 24902167 - 24902123
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||| |  ||||||||||||||||||||||| |||||||    
T  24902167 atgtaacgccatgcttctattaaagcgataaaacacgcgaataat 24902123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0480 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0480
Description:

Target: scaffold0480; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 11284 - 11240
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  11284 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 11240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 3966 - 3922
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  3966 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 3922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 19334294 - 19334250
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  19334294 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 19334250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 20707677 - 20707721
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  20707677 atgtaacgccctatttctattaaagcgataaaacacgtgaataat 20707721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 22499589 - 22499545
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  22499589 atgtaacgccctatttctattaaagcgataaaacacgtgaataat 22499545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 11541895 - 11541937
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  11541895 tgtaacgccctatttctattaaagcgataaaacacgcgaataa 11541937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 475 - 520
Target Start/End: Complemental strand, 22725719 - 22725674
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataatc 520  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||    
T  22725719 atgtaacgtcctatttctattaaagcgataaaacacgtgaataatc 22725674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 5851390 - 5851433
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  5851390 tgtaacaccctatttctattaaagcgataaaacacgcgaataat 5851433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 17499747 - 17499790
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  17499747 tgtaacgccctacttctattaaagcgataaaacacgcgaataat 17499790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 24554859 - 24554816
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||| |||||||||||||||||||||| |||||||    
T  24554859 tgtaacgccctatctctattaaagcgataaaacacgcgaataat 24554816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 27233477 - 27233434
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  27233477 tgtaacgccctatttctattaaagcggtaaaacacgcgaataat 27233434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 33170141 - 33170184
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  33170141 tgtaacgccctatttttattaaagcgataaaacacgcgaataat 33170184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 22883680 - 22883722
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  22883680 tgtaacgccctatttatattaaagcgataaaacacgcgaataa 22883722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 26009321 - 26009363
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||| |||||||||||||||||||| ||||||    
T  26009321 tgtaacgccctatttatattaaagcgataaaacacgcgaataa 26009363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 510
Target Start/End: Original strand, 29295769 - 29295803
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||||||||||||||||||||||||||||||||||    
T  29295769 tgtaacgccctatttctattaaagcgataaaacac 29295803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 18043433 - 18043392
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  18043433 taacgcccaatttctattaaagcgataaaacacgcgaataat 18043392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 23119122 - 23119081
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||| |||||||||||||||||||||||||||| |||||||    
T  23119122 taacgtcctatttctattaaagcgataaaacacgcgaataat 23119081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 478 - 518
Target Start/End: Original strand, 11599965 - 11600005
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||| |||||||||||| ||||||    
T  11599965 taacgccctatttctattaaaacgataaaacacgcgaataa 11600005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 21234312 - 21234268
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||    
T  21234312 atgtaacgtcctatttctattaaagtgataaaacacgcgaataat 21234268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 15931213 - 15931256
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||| ||||||||| |||||||||| |||||||    
T  15931213 tgtaacgccctatttttattaaagcaataaaacacgcgaataat 15931256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 18120680 - 18120645
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    ||||||||| ||||||||||||||||||||||||||    
T  18120680 tgtaacgccatatttctattaaagcgataaaacacg 18120645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18263687 - 18263644
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||    
T  18263687 tgtaacgccctatttctatcaaagcaataaaacacgcgaataat 18263644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 24236922 - 24236965
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||||||| | |||||||    
T  24236922 tgtaacgccttatttctattaaagcgataaaacatgcgaataat 24236965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 510
Target Start/End: Original strand, 17264388 - 17264422
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    ||||| |||||||||||||||||||||||||||||    
T  17264388 tgtaatgccctatttctattaaagcgataaaacac 17264422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 21193011 - 21192969
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| ||||||||||||||||||| ||||||||| ||||||    
T  21193011 tgtaacaccctatttctattaaagcggtaaaacacgcgaataa 21192969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 23833156 - 23833198
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||||| ||||||| || ||||||    
T  23833156 tgtaacgccctatttctattaaagcaataaaactcgcgaataa 23833198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 18770420 - 18770375
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| ||||||||||||||||| |||||||| | |||||||    
T  18770420 tatgtaacgacctatttctattaaagcaataaaacatgcgaataat 18770375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 39449104 - 39449059
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||    
T  39449104 tatgtaacaccctatttctattaaagcaataaaacatgcgaataat 39449059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 478 - 518
Target Start/End: Original strand, 17283127 - 17283167
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||| |||||||||||||||||||||||||| || ||||||    
T  17283127 taacaccctatttctattaaagcgataaaactcgcgaataa 17283167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 17731818 - 17731774
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||| |||||||| | |||||||    
T  17731818 atgtaacaccctatttctattaaagcaataaaacatgtgaataat 17731774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 37)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 3194304 - 3194260
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  3194304 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 3194260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 14938598 - 14938641
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  14938598 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 14938641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 15366191 - 15366234
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  15366191 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 15366234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 21677779 - 21677736
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  21677779 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 21677736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 17926734 - 17926776
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  17926734 tgtaacgccctatttctattaaagcgataaaacacgcgaataa 17926776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 479 - 519
Target Start/End: Complemental strand, 20587900 - 20587860
Alignment:
Q  479 aacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||| |||||||    
T  20587900 aacgccctatttctattaaagcgataaaacacgcgaataat 20587860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 9058903 - 9058860
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  9058903 tgtaacgccctatttctattaaagcgatcaaacacgcgaataat 9058860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 9323341 - 9323298
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  9323341 tgtaacgccctatttttattaaagcgataaaacacgcgaataat 9323298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 14303128 - 14303085
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  14303128 tgtaacgccctacttctattaaagcgataaaacacgcgaataat 14303085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 16381803 - 16381846
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  16381803 tgtaacaccctatttctattaaagcgataaaacacgcgaataat 16381846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 17948309 - 17948266
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||| ||||||||||||||||||||||||||| |||||||    
T  17948309 tgtaacgcactatttctattaaagcgataaaacacgcgaataat 17948266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 28388355 - 28388398
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  28388355 tgtaacgtcctatttctattaaagcgataaaacacgcgaataat 28388398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 31499135 - 31499178
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  31499135 tgtaacgccctacttctattaaagcgataaaacacgcgaataat 31499178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 34243423 - 34243380
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  34243423 tgtaacaccctatttctattaaagcgataaaacacgcgaataat 34243380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 15305335 - 15305377
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  15305335 tgtaacgccctacttctattaaagcgataaaacacgcgaataa 15305377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 15980795 - 15980753
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||| ||||| ||||||    
T  15980795 tgtaacgccctatttctattaaagcgataatacacgcgaataa 15980753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 510
Target Start/End: Original strand, 48345478 - 48345512
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||||||||||||||||||||||||||||||||||    
T  48345478 tgtaacgccctatttctattaaagcgataaaacac 48345512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 9640942 - 9640982
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaat 516  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  9640942 tgtaacgccctatttcttttaaagcgataaaacacgcgaat 9640982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 14279187 - 14279143
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||| |||||||||||||||| ||||||||||| |||||||    
T  14279187 atgtaacgtcctatttctattaaagtgataaaacacgcgaataat 14279143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 3135056 - 3135099
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| || |||||||||||||||||||| |||||||    
T  3135056 tgtaacgccctacttttattaaagcgataaaacacgcgaataat 3135099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 4444176 - 4444219
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||| ||| ||||||| |||||||    
T  4444176 tgtaacgccctatttctattaaagagattaaacacgcgaataat 4444219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 5617346 - 5617381
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||||||||||||||||||||| |||||||||    
T  5617346 tgtaacgccctatttctattaaagcggtaaaacacg 5617381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 12182130 - 12182173
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||||||||||||  |||||||    
T  12182130 tgtaacgtcctatttctattaaagcgataaaacacacgaataat 12182173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 16370646 - 16370603
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||| ||||||||||||||||| ||| |||||||    
T  16370646 tgtaacgccctattcctattaaagcgataaaatacgtgaataat 16370603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 16487359 - 16487394
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||||||||||||||||||||||||| |||||    
T  16487359 tgtaacgccctatttctattaaagcgataatacacg 16487394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 16915539 - 16915582
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||| ||||||| | |||||||    
T  16915539 tgtaacgccctatttctattaaagcggtaaaacatgcgaataat 16915582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18081581 - 18081538
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| | |||||||||||||||||||||||||| |||||||    
T  18081581 tgtaacgtcttatttctattaaagcgataaaacacgcgaataat 18081538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18366299 - 18366256
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| |||||| |||||||||||||||| |||||||    
T  18366299 tgtaacgccctacttctatcaaagcgataaaacacgcgaataat 18366256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18921337 - 18921294
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| ||||||| |||||||||||||||||||| |||||||    
T  18921337 tgtaacgtcctatttttattaaagcgataaaacacgcgaataat 18921294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 19380852 - 19380895
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||| | |||||||    
T  19380852 tgtaacgccctacttctattaaagcgataaaacatgcgaataat 19380895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 39294436 - 39294393
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||| ||||||||||||||||  |||||||    
T  39294436 tgtaacgccctatttctaataaagcgataaaacacacgaataat 39294393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 510
Target Start/End: Original strand, 9609134 - 9609168
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    ||||||| |||||||||||||||||||||||||||    
T  9609134 tgtaacgacctatttctattaaagcgataaaacac 9609168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 510
Target Start/End: Original strand, 9836706 - 9836740
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    ||||||| |||||||||||||||||||||||||||    
T  9836706 tgtaacgacctatttctattaaagcgataaaacac 9836740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 518
Target Start/End: Original strand, 12245586 - 12245624
Alignment:
Q  480 acgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||| |||||||||| ||||||    
T  12245586 acgccctatttctattaaagcaataaaacacgcgaataa 12245624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 19065155 - 19065197
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||  ||||||||||||||||||||||||||| ||||||    
T  19065155 tgtaacgtactatttctattaaagcgataaaacacgcgaataa 19065197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 25122069 - 25122113
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||| | |||||||| | |||||||    
T  25122069 atgtaacgccctatttctattaaatcaataaaacatgtgaataat 25122113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 28717935 - 28717975
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaat 516  Q
    ||||||||| ||||| |||||||||||||||||||| ||||    
T  28717935 tgtaacgccatatttttattaaagcgataaaacacgcgaat 28717975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 3421116 - 3421072
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  3421116 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 3421072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 11963147 - 11963190
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  11963147 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 11963190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 519
Target Start/End: Original strand, 6454592 - 6454637
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||| ||||||||||||||||||||||| |||||||    
T  6454592 tatgtaacgccctacttctattaaagcgataaaacacgcgaataat 6454637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 28887783 - 28887824
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  28887783 taacgccctatttctattaaagcgataaaacacgcgaataat 28887824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 5453614 - 5453571
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||| || |||||||||||||||||||||||||||||||||    
T  5453614 atgtaacaccatatttctattaaagcgataaaacacgagaataa 5453571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 16838017 - 16837974
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  16838017 tgtaacgccttatttctattaaagcgataaaacacgcgaataat 16837974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 23236692 - 23236657
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    ||||||||||||||||||||||||||||||||||||    
T  23236692 tgtaacgccctatttctattaaagcgataaaacacg 23236657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 24082005 - 24082048
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||| |||||| |||||||    
T  24082005 tgtaacgccctatttctattaaagcgatacaacacgcgaataat 24082048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 510
Target Start/End: Complemental strand, 11765994 - 11765960
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||||||||||||||||||||||||||||||||||    
T  11765994 tgtaacgccctatttctattaaagcgataaaacac 11765960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 475 - 509
Target Start/End: Original strand, 19871803 - 19871837
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaaca 509  Q
    |||||||||||||||||||||||||||||||||||    
T  19871803 atgtaacgccctatttctattaaagcgataaaaca 19871837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 22879787 - 22879829
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  22879787 tgtaacaccctatttctattaaagcgataaaacacgcgaataa 22879829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 457 - 510
Target Start/End: Complemental strand, 33628855 - 33628802
Alignment:
Q  457 tataaatataggtgatatatgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||| |||||| ||| || | |||||||||||||||||||||||||||||||||    
T  33628855 tatagatatagatgacatctataacgccctatttctattaaagcgataaaacac 33628802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 14345953 - 14345909
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| ||||||||||  |||||||    
T  14345953 atgtaacgccctatttctattaaagagataaaacacacgaataat 14345909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 12030158 - 12030115
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||| | |||||||    
T  12030158 tgtaacgccctatttctattaaagcaataaaacatgcgaataat 12030115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 22056133 - 22056090
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||| | |||||||    
T  22056133 tgtaacgccctatttctattaaagcaataaaacatgcgaataat 22056090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 29911937 - 29911980
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||  |||||||    
T  29911937 tgtaacaccctatttctattaaagcgataaaacacacgaataat 29911980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 37985731 - 37985774
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||| ||||| |||||||    
T  37985731 tgtaaccccctatttctattaaagcgataacacacgtgaataat 37985774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 13793026 - 13793068
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||||| ||||||| || ||||||    
T  13793026 tgtaacgccctatttctattaaagccataaaactcgcgaataa 13793068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 430686 - 430730
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||| |||||||| | |||||||    
T  430686 atgtaacaccctatttctattaaagcaataaaacatgcgaataat 430730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 478 - 518
Target Start/End: Original strand, 23411879 - 23411919
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||| |||||||||||||||||||||||| | ||||||    
T  23411879 taacgccttatttctattaaagcgataaaacatgcgaataa 23411919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 13449297 - 13449253
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  13449297 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 13449253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 42706674 - 42706718
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  42706674 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 42706718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 50224441 - 50224397
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||| |||||||    
T  50224441 atgtaacgccctatttctattaaagcgataaaacacgcgaataat 50224397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 12370720 - 12370677
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  12370720 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 12370677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 15216443 - 15216401
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  15216443 tgtaacgccctatttctattaaagcgataaaacacgcgaataa 15216401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 12729296 - 12729340
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||    
T  12729296 atgtaacgccctacttctattaaagcgataaaacacgcgaataat 12729340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 474 - 518
Target Start/End: Complemental strand, 15853568 - 15853524
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||||||||||||||| || ||||||    
T  15853568 tatgtaacgccctatttctattaaagcgataaaactcgcgaataa 15853524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 520
Target Start/End: Complemental strand, 17378473 - 17378429
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataatc 520  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  17378473 tgtaacgcgctatttctattaaagcgataaaacacgtgaataatc 17378429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 19557222 - 19557266
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||||||  |||||||    
T  19557222 atgtaacgccctatttctattaaagcgataaaacacatgaataat 19557266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18241471 - 18241428
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  18241471 tgtaatgccctatttctattaaagcgataaaacacgtgaataat 18241428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 12136567 - 12136525
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  12136567 tgtaacgccatatttctattaaagcgataaaacacgcgaataa 12136525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 469 - 519
Target Start/End: Original strand, 14867262 - 14867312
Alignment:
Q  469 tgatatatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||| |||||||||||||||||||||||||| |||||||| | |||||||    
T  14867262 tgataaatgtaacgccctatttctattaaagcaataaaacatgcgaataat 14867312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 24236830 - 24236872
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  24236830 tgtaacgccttatttctattaaagcgataaaacacgcgaataa 24236872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 480 - 518
Target Start/End: Complemental strand, 41168195 - 41168157
Alignment:
Q  480 acgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  41168195 acgccctatttctattaaagcgataaaacacgtgaataa 41168157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 519
Target Start/End: Complemental strand, 41919529 - 41919488
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||| ||||||||||||||||||||||||||||| |||||||    
T  41919529 taacaccctatttctattaaagcgataaaacacgcgaataat 41919488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 516
Target Start/End: Complemental strand, 13596303 - 13596263
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaat 516  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  13596303 tgtaacgccctatttcttttaaagcgataaaacacgcgaat 13596263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 5407062 - 5407097
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||||||||||||||||||| |||||||||||    
T  5407062 tgtaacgccctatttctattaaagtgataaaacacg 5407097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Complemental strand, 7966886 - 7966843
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||| | ||||||||||||||||||||||||||| ||||||    
T  7966886 atgtaacactctatttctattaaagcgataaaacacgcgaataa 7966843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 10239724 - 10239681
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||| |||||||||||||||||||| |||||||||| |||||||    
T  10239724 tgtagcgccctatttctattaaagcaataaaacacgcgaataat 10239681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 12338947 - 12338912
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||||||| |||||||||||||||||||||||    
T  12338947 tgtaacgccctacttctattaaagcgataaaacacg 12338912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 18274701 - 18274736
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||||||||||||||||||| |||||||||||    
T  18274701 tgtaacgccctatttctattaaagtgataaaacacg 18274736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 18496759 - 18496716
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| |||||||||||||||||| |||||||| |||||||||    
T  18496759 tgtaacaccctatttctattaaagcaataaaacatgagaataat 18496716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 31113600 - 31113643
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||| | |||||||    
T  31113600 tgtaacgccctatttctattaaagcaataaaacatgcgaataat 31113643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 47470618 - 47470575
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||| ||||||||||| |||||||    
T  47470618 tgtaacgccatatttctattaaagtgataaaacacgcgaataat 47470575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 510
Target Start/End: Complemental strand, 19624317 - 19624283
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||||||||||||||||||||||||||||| ||||    
T  19624317 tgtaacgccctatttctattaaagcgataatacac 19624283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 54366332 - 54366290
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||| |||||||||||||||| |||||||||| ||||||    
T  54366332 tgtaacgctctatttctattaaagcaataaaacacgcgaataa 54366290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 476 - 517
Target Start/End: Complemental strand, 41258663 - 41258622
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaata 517  Q
    ||||| ||||||||||||||||| |||||||||||| |||||    
T  41258663 tgtaatgccctatttctattaaaacgataaaacacgcgaata 41258622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 14503823 - 14503779
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||| || ||||| | |||||||    
T  14503823 atgtaacgccctatttctattaaagcaattaaacatgcgaataat 14503779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 476 - 516
Target Start/End: Original strand, 38762670 - 38762710
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaat 516  Q
    |||||||||||||||||||||||| ||||||| ||| ||||    
T  38762670 tgtaacgccctatttctattaaagtgataaaatacgcgaat 38762710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1068 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold1068
Description:

Target: scaffold1068; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 1210 - 1253
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  1210 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 1253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 3101 - 3058
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  3101 tgtaacgccctatttctattaaagcgataaaacacgtgaataat 3058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 11356 - 11313
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  11356 tgtaacgccctatttctattaaagcgataaaacacgtgaataat 11313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 12748 - 12705
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  12748 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 12705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0148 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0148
Description:

Target: scaffold0148; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 35814 - 35857
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  35814 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 35857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 103876 - 103919
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  103876 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 103919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 99037 - 99080
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  99037 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 99080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 6092419 - 6092462
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  6092419 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 6092462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 15006913 - 15006870
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  15006913 tgtaacgccctatttctattaaagcgataaaacacgggaataat 15006870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 17085832 - 17085789
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  17085832 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 17085789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 19670426 - 19670469
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  19670426 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 19670469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 34964822 - 34964865
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  34964822 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 34964865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 16890092 - 16890048
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||| |||||||||||| |||||||    
T  16890092 atgtaacgccctatttctattaaaacgataaaacacgcgaataat 16890048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 17858652 - 17858608
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||| |||||||||| |||||||    
T  17858652 atgtaacgccctatttctattaaagcaataaaacacgcgaataat 17858608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 12311287 - 12311244
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  12311287 tgtaacgccatatttctattaaagcgataaaacacgcgaataat 12311244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 16373877 - 16373920
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||||||||| |||||||    
T  16373877 tgtaacgccttatttctattaaagcgataaaacacgcgaataat 16373920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 22364518 - 22364475
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||| ||||||||| |||||||    
T  22364518 tgtaacgccctatttctattaaagcggtaaaacacgcgaataat 22364475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 22595944 - 22595901
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  22595944 tgtaacgccctacttctattaaagcgataaaacacgcgaataat 22595901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 22846013 - 22846056
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||||| || |||||||    
T  22846013 tgtaacgccctatttctattaaagcgataaaacccgcgaataat 22846056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 23025120 - 23025077
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  23025120 tgtaacaccctatttctattaaagcgataaaacacgcgaataat 23025077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 31469795 - 31469752
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  31469795 tgtaacgccctatttctattaaaacgataaaacacgcgaataat 31469752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 21929332 - 21929374
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  21929332 tgtaacaccctatttctattaaagcgataaaacacgcgaataa 21929374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 29163199 - 29163157
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||| ||||||||||||||||||||||||||| ||||||    
T  29163199 tgtaacgctctatttctattaaagcgataaaacacgtgaataa 29163157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 941316 - 941272
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||| ||||||||||||||||||||| | |||||||    
T  941316 atgtaacgccctaattctattaaagcgataaaacatgcgaataat 941272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 22468359 - 22468323
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||| ||||||||||||||||||||||||||||||    
T  22468359 atgtaatgccctatttctattaaagcgataaaacacg 22468323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 14150468 - 14150511
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||||||||| |||  |||||||    
T  14150468 tgtaacgccctatttctattaaagcgataaagcacacgaataat 14150511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 16131146 - 16131189
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||| ||||||||||||||||| ||||||||||| ||||||    
T  16131146 atgtaacaccctatttctattaaagggataaaacacgcgaataa 16131189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 17375995 - 17375952
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| |||||||||||||||||||||||||  |||||||    
T  17375995 tgtaacgccatatttctattaaagcgataaaacacacgaataat 17375952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 479 - 518
Target Start/End: Original strand, 18017713 - 18017752
Alignment:
Q  479 aacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||| ||||||||||| ||||||    
T  18017713 aacgccctatttctattaaagtgataaaacacgcgaataa 18017752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 507
Target Start/End: Complemental strand, 21927524 - 21927493
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaa 507  Q
    ||||||||||||||||||||||||||||||||    
T  21927524 tgtaacgccctatttctattaaagcgataaaa 21927493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 25782642 - 25782599
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||    
T  25782642 tgtaacgccctacttctattaaagtgataaaacacgtgaataat 25782599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 25917579 - 25917622
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||| ||||||||||| |||||||    
T  25917579 tgtaacgccctaattctattaaagtgataaaacacgcgaataat 25917622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 17791445 - 17791403
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||| |||||||||||||||||||||||||||| | ||||||    
T  17791445 tgtaatgccctatttctattaaagcgataaaacaagcgaataa 17791403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 15081137 - 15081093
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||| |||||||| | |||||||    
T  15081137 atgtaacaccctatttctattaaagcaataaaacatgcgaataat 15081093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 25369724 - 25369680
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||| |||||||| | |||||||    
T  25369724 atgtaacaccctatttctattaaagcaataaaacatgcgaataat 25369680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 24271938 - 24271981
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  24271938 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 24271981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 478 - 520
Target Start/End: Original strand, 19643763 - 19643805
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataatc 520  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  19643763 taacgccctatttctattaaagcgataaaacacgcgaataatc 19643805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 19436204 - 19436160
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| ||||||||||||||||||||||||||||| |||||||    
T  19436204 atgtaacaccctatttctattaaagcgataaaacacgcgaataat 19436160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 6092343 - 6092386
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||| |||||||||||||||||||| |||||||    
T  6092343 tgtaacgccctatttttattaaagcgataaaacacgcgaataat 6092386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 19647975 - 19648018
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||| | |||||||    
T  19647975 tgtaacgccctatttctattaaagcgataaaacaagcgaataat 19648018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 24381661 - 24381704
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||||| |||||||    
T  24381661 tgtaacgccctacttctattaaagcgataaaacacgcgaataat 24381704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 25303476 - 25303518
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||||||||||||| || ||||||    
T  25303476 tgtaacgccctatttctattaaagcgataaaactcgcgaataa 25303518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 25593128 - 25593170
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  25593128 tgtaacaccctatttctattaaagcgataaaacacgcgaataa 25593170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 32738356 - 32738398
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  32738356 tgtaacgccctatttctattaaagcggtaaaacacgcgaataa 32738398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 45620723 - 45620681
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||||| | ||||||    
T  45620723 tgtaacgccctatttctattaaagcgataaaacatgcgaataa 45620681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 517
Target Start/End: Original strand, 43640240 - 43640281
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaata 517  Q
    ||||||||||||||| |||||||||||||||||||| |||||    
T  43640240 tgtaacgccctatttatattaaagcgataaaacacgcgaata 43640281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 9783149 - 9783106
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| |||||||| |||||||||||||||||||| |||||||    
T  9783149 tgtaacaccctatttatattaaagcgataaaacacgcgaataat 9783106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 20021763 - 20021806
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| || ||||||||||||||||||||||| |||||||    
T  20021763 tgtaacgccatacttctattaaagcgataaaacacgtgaataat 20021806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 30995264 - 30995221
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||| |||||||||||||||||||  |||||||    
T  30995264 tgtaacgccctatttttattaaagcgataaaacacacgaataat 30995221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 32463805 - 32463848
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||| | |||||||    
T  32463805 tgtaacgccctatttctattaaagcaataaaacatgcgaataat 32463848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 34875919 - 34875962
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||| | |||||||    
T  34875919 tgtaacgccctacttctattaaagcgataaaacatgcgaataat 34875962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 507
Target Start/End: Original strand, 20270819 - 20270851
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaa 507  Q
    ||||||| |||||||||||||||||||||||||    
T  20270819 atgtaacaccctatttctattaaagcgataaaa 20270851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 21193051 - 21193094
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  21193051 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 21193094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 40555265 - 40555308
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  40555265 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 40555308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 50002229 - 50002186
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| |||||||    
T  50002229 tgtaacgccctatttctattaaagcgataaaacacgcgaataat 50002186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 475 - 522
Target Start/End: Original strand, 52397549 - 52397596
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataatcta 522  Q
    |||||||||| |||||||||||||||||||||||||| ||||||||||    
T  52397549 atgtaacgccttatttctattaaagcgataaaacacgcgaataatcta 52397596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 17606816 - 17606858
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  17606816 tgtaacgccctatttctattaaagcgataaaacacgcgaataa 17606858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 21041679 - 21041725
Alignment:
Q  473 atatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||    
T  21041679 atatgtaacgccctacttctattaaagcgataaaacacgcgaataat 21041725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 78775 - 78732
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||| |||||||||||||||||| |||||||    
T  78775 tgtaacgccctatttctgttaaagcgataaaacacgcgaataat 78732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 18164101 - 18164144
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||||| |||||||    
T  18164101 tgtaacgccctatttctattaaagcaataaaacacgcgaataat 18164144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 20957312 - 20957269
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||| ||||||| |||||||    
T  20957312 tgtaacgccctatttctattaaagcgattaaacacgcgaataat 20957269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 25090964 - 25091006
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||| ||||||||||||||||||||||| ||||||    
T  25090964 tgtaacgccctacttctattaaagcgataaaacacgcgaataa 25091006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 27672677 - 27672719
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||| ||||||||| ||||||    
T  27672677 tgtaacgccctatttctattaaagcggtaaaacacgcgaataa 27672719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 519
Target Start/End: Original strand, 46143666 - 46143711
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||| ||||||| |||||||||||| |||||||    
T  46143666 tatgtaacgccctatttatattaaatcgataaaacacgcgaataat 46143711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 21223611 - 21223655
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||| ||| ||||||||||||||||||||||| |||||||    
T  21223611 atgtaacgctctacttctattaaagcgataaaacacgtgaataat 21223655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 37236242 - 37236198
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| |||||||||||||| ||||||||| |||||||    
T  37236242 atgtaacgccctgtttctattaaagcggtaaaacacgcgaataat 37236198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 475 - 510
Target Start/End: Original strand, 20191652 - 20191687
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacac 510  Q
    |||||||||| |||||||||||||||||||||||||    
T  20191652 atgtaacgccttatttctattaaagcgataaaacac 20191687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 29217047 - 29217090
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| || |||||||||||||||||||||||||| |||||||    
T  29217047 tgtaacaccatatttctattaaagcgataaaacacgcgaataat 29217090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0561 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 1)
Name: scaffold0561
Description:

Target: scaffold0561; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 5025 - 4983
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  5025 tgtaacgccctatttctattaaagcgataaaacacgcgaataa 4983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 5649 - 5690
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||| |||||||    
T  5649 taacgccctatttctattaaagcgataaaacacgcgaataat 5690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 106895 - 106850
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||||||| | |||||||    
T  106895 tatgtaacgccctatttctattaaagcgataaaacaagcgaataat 106850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 476 - 517
Target Start/End: Complemental strand, 122231 - 122190
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaata 517  Q
    |||||||||||||||||||||||||||||||||||| |||||    
T  122231 tgtaacgccctatttctattaaagcgataaaacacgcgaata 122190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 519
Target Start/End: Complemental strand, 102080 - 102036
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| ||||||||| | |||||||    
T  102080 atgtaacgccctatttctattaaagggataaaacatgcgaataat 102036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0387 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0387
Description:

Target: scaffold0387; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 471 - 519
Target Start/End: Complemental strand, 3314 - 3266
Alignment:
Q  471 atatatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||| |||||||||||||||| ||||||||||||||||||| |||||||    
T  3314 atatgtgtaacgccctatttccattaaagcgataaaacacgcgaataat 3266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 476 - 516
Target Start/End: Complemental strand, 199626 - 199586
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaat 516  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  199626 tgtaacgccctatttctattaaagcgataaaacacgcgaat 199586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1949 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1949
Description:

Target: scaffold1949; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 1091 - 1134
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||| ||||||||||||||||||| |||||||    
T  1091 tgtaacgccctatttccattaaagcgataaaacacgcgaataat 1134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442 (Bit Score: 36; Significance: 0.00000000005; HSPs: 2)
Name: scaffold0442
Description:

Target: scaffold0442; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 2254 - 2211
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||||||||||||||||||||||||||| |||||||    
T  2254 tgtaacaccctatttctattaaagcgataaaacacgtgaataat 2211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0442; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 14391 - 14348
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||| | |||||||    
T  14391 tgtaacgccctaattctattaaagcgataaaacatgtgaataat 14348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 511
Target Start/End: Complemental strand, 7461 - 7426
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    ||||||||||||||||||||||||||||||||||||    
T  7461 tgtaacgccctatttctattaaagcgataaaacacg 7426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 475 - 518
Target Start/End: Original strand, 11326 - 11369
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||| ||||||||||||| ||||||    
T  11326 atgtaacgccctatttctattaaggcgataaaacacgcgaataa 11369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 7424 - 7381
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||| |||||||||||| |||||||    
T  7424 tgtaacgccctatttctattaaatcgataaaacacgcgaataat 7381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 34428 - 34385
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  34428 tgtaacgccctatttctattaaagcgataatacacgcgaataat 34385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 99474 - 99431
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||||||||||||| |||||||    
T  99474 tgtaacgtcctatttctattaaagcgataaaacacgcgaataat 99431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 70583 - 70540
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||| |||||||||||||||||||||| |||||||    
T  70583 tgtaacgccctatgtctattaaagcgataaaacacgcgaataat 70540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 99225 - 99182
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||| ||||| |||||||    
T  99225 tgtaacgccctatttctattaaagcgataatacacgtgaataat 99182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 84314 - 84357
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||||||||| ||| |||||||    
T  84314 tgtaacgccctatttctattaaagcgataaaatacgtgaataat 84357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 141537 - 141494
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||| |||||||||||||||||||||||||||||| |||||||    
T  141537 tgtaaggccctatttctattaaagcgataaaacacgtgaataat 141494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0725 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0725
Description:

Target: scaffold0725; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 6976 - 7018
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  6976 tgtaacaccctatttctattaaagcgataaaacacgcgaataa 7018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0503 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0503
Description:

Target: scaffold0503; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 473 - 519
Target Start/End: Original strand, 9246 - 9292
Alignment:
Q  473 atatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||| |||| ||||||||||||||||||||||||||||| |||||||    
T  9246 atatataacaccctatttctattaaagcgataaaacacgcgaataat 9292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 2401 - 2359
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||| ||||||||||||||||||||||||||||| ||||||    
T  2401 tgtaacaccctatttctattaaagcgataaaacacgcgaataa 2359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 73567 - 73525
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||| ||| |||||||||||||||||||||||||| ||||||    
T  73567 tgtaatgccatatttctattaaagcgataaaacacgcgaataa 73525  T

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Target: scaffold0017 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 10175 - 10217
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||| |||||||||||||||||||||||||| ||||||    
T  10175 tgtaacgccatatttctattaaagcgataaaacacgcgaataa 10217  T

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Target: scaffold0601 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0601
Description:

Target: scaffold0601; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 509
Target Start/End: Complemental strand, 3659 - 3626
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaaca 509  Q
    ||||||||||||||||||||||||||||||||||    
T  3659 tgtaacgccctatttctattaaagcgataaaaca 3626  T

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Target: scaffold0329 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0329
Description:

Target: scaffold0329; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 476 - 517
Target Start/End: Original strand, 1012 - 1053
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaata 517  Q
    |||||||||||| ||||||||||||||||||||||| |||||    
T  1012 tgtaacgccctacttctattaaagcgataaaacacgtgaata 1053  T

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Target: scaffold0258 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 478 - 519
Target Start/End: Original strand, 8197 - 8238
Alignment:
Q  478 taacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||| ||||||||||||||||||||||| |||||||    
T  8197 taacgccctacttctattaaagcgataaaacacgcgaataat 8238  T

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Target: scaffold0174 (Bit Score: 34; Significance: 0.0000000008; HSPs: 2)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 22846 - 22801
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||    
T  22846 tatgtaaagccctatttctattaaagtgataaaacacgcgaataat 22801  T

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Target: scaffold0174; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 511
Target Start/End: Original strand, 464 - 499
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacg 511  Q
    |||||||| |||||||||||||||||||||||||||    
T  464 tgtaacgcactatttctattaaagcgataaaacacg 499  T

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Target: scaffold0219 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 475 - 511
Target Start/End: Complemental strand, 26301 - 26265
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacg 511  Q
    ||||||| |||||||||||||||||||||||||||||    
T  26301 atgtaacaccctatttctattaaagcgataaaacacg 26265  T

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Target: scaffold0013 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 476 - 508
Target Start/End: Original strand, 33367 - 33399
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaac 508  Q
    |||||||||||||||||||||||||||||||||    
T  33367 tgtaacgccctatttctattaaagcgataaaac 33399  T

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Target: scaffold0557 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0557
Description:

Target: scaffold0557; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 501 - 458
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| ||||||||||||||||||||| | |||||||    
T  501 tgtaacgccctaattctattaaagcgataaaacatgtgaataat 458  T

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Target: scaffold0456 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 12938 - 12895
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||| ||||||||||||||||||||||| |||| |||||||    
T  12938 tgtaacgtcctatttctattaaagcgataaatcacgcgaataat 12895  T

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Target: scaffold0331 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0331
Description:

Target: scaffold0331; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 483 - 518
Target Start/End: Original strand, 6175 - 6210
Alignment:
Q  483 ccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6175 ccctatttctattaaagcgataaaacacgtgaataa 6210  T

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Target: scaffold0231 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 16137 - 16094
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||| ||||| ||||||||||||||||||||||| |||||||    
T  16137 tgtaacaccctacttctattaaagcgataaaacacgcgaataat 16094  T

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Target: scaffold0231; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Complemental strand, 15623 - 15581
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||| ||| ||||||||||||||||||||||| ||||||    
T  15623 tgtaacgctctacttctattaaagcgataaaacacgtgaataa 15581  T

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Target: scaffold0193 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 2833 - 2876
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||| ||||| ||||||||||||||||||| |||||||    
T  2833 tgtaacgccccatttcgattaaagcgataaaacacgcgaataat 2876  T

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Target: scaffold0165 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 20036 - 20079
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||| |||||||||||||||||||||||||| ||| |||||||    
T  20036 tgtaatgccctatttctattaaagcgataaaaaacgcgaataat 20079  T

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Target: scaffold0151 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Complemental strand, 31928 - 31885
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||| |||||||||||| |||||||||| |||||||    
T  31928 tgtaacgccctaattctattaaagcaataaaacacgcgaataat 31885  T

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Target: scaffold0112 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 4784 - 4827
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||| |||||||||||||||||||||||| ||||| |||||||    
T  4784 tgtaatgccctatttctattaaagcgataatacacgcgaataat 4827  T

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Target: scaffold0066 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 43796 - 43839
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||| | |||||||    
T  43796 tgtaacgccctatttctattaaagcaataaaacaagcgaataat 43839  T

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Target: scaffold0066; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 476 - 519
Target Start/End: Original strand, 51966 - 52009
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||||||||||||||||| |||||||| | |||||||    
T  51966 tgtaacgccctatttctattaaagcaataaaacatgcgaataat 52009  T

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Target: scaffold0057 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 478 - 509
Target Start/End: Original strand, 3854 - 3885
Alignment:
Q  478 taacgccctatttctattaaagcgataaaaca 509  Q
    ||||||||||||||||||||||||||||||||    
T  3854 taacgccctatttctattaaagcgataaaaca 3885  T

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Target: scaffold0216 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0216
Description:

Target: scaffold0216; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 518
Target Start/End: Complemental strand, 23384 - 23350
Alignment:
Q  484 cctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||||| ||||||    
T  23384 cctatttctattaaagcgataaaacacgcgaataa 23350  T

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Target: scaffold0092 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 1227 - 1269
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||||| ||||||| | ||||||    
T  1227 tgtaacgccctatttctattaaagcggtaaaacatgcgaataa 1269  T

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Target: scaffold0025 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 2377 - 2419
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    ||||||| |||||||||||||||||||||| ||||| ||||||    
T  2377 tgtaacgtcctatttctattaaagcgataatacacgcgaataa 2419  T

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Target: scaffold0010 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 476 - 518
Target Start/End: Original strand, 28994 - 29036
Alignment:
Q  476 tgtaacgccctatttctattaaagcgataaaacacgagaataa 518  Q
    |||||||||||||||||||||||| | ||||||||| ||||||    
T  28994 tgtaacgccctatttctattaaaggggtaaaacacgcgaataa 29036  T

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Target: scaffold0236 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 25654 - 25609
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    ||||||||||| |||||||||||||||| ||||||| | |||||||    
T  25654 tatgtaacgccttatttctattaaagcggtaaaacatgcgaataat 25609  T

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Target: scaffold0161 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 510
Target Start/End: Original strand, 25281 - 25314
Alignment:
Q  477 gtaacgccctatttctattaaagcgataaaacac 510  Q
    ||||||| ||||||||||||||||||||||||||    
T  25281 gtaacgctctatttctattaaagcgataaaacac 25314  T

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Target: scaffold0095 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 474 - 519
Target Start/End: Complemental strand, 7947 - 7902
Alignment:
Q  474 tatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||| |||||||||||||||||| |||||||| | |||||||    
T  7947 tatgtaacaccctatttctattaaagcaataaaacatgcgaataat 7902  T

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Target: scaffold0121 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 471 - 519
Target Start/End: Original strand, 6867 - 6915
Alignment:
Q  471 atatatgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||| |||||| |||||||||||||||||| |||||||| | |||||||    
T  6867 atatctgtaacaccctatttctattaaagcaataaaacatgtgaataat 6915  T

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Target: scaffold0042 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 475 - 519
Target Start/End: Original strand, 75062 - 75106
Alignment:
Q  475 atgtaacgccctatttctattaaagcgataaaacacgagaataat 519  Q
    |||||||||||||||||||||||||| || ||||| | |||||||    
T  75062 atgtaacgccctatttctattaaagcaattaaacatgcgaataat 75106  T

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