View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13978_high_12 (Length: 403)
Name: NF13978_high_12
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13978_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 363; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 363; E-Value: 0
Query Start/End: Original strand, 14 - 388
Target Start/End: Original strand, 35267652 - 35268026
Alignment:
| Q |
14 |
gaacaataatcaccctgatgaacaagaaaggggatgtaatgttccccttcctaagtagctgcagtcattagaatcaagaccagggctctctattttacca |
113 |
Q |
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| T |
35267652 |
gaacaataatcaccctgatgaacaagaaaggggatgtaatgttccccttcctaagtagctgcagtcattagaatcaagaccagggctctctattttacca |
35267751 |
T |
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| Q |
114 |
tttcaaaatttatagctagaaatccaagtcgacacgcttatatgctttctgaaaatccaacatgaagtctaaattgcattttctcccaaactaaaatctc |
213 |
Q |
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| T |
35267752 |
tttcaaaatttatagctagaaatccaagtcgacacgcttatatgctttctgaaaatccaacatgaagtctaaattgcattttctcccaaactaaaatctc |
35267851 |
T |
|
| Q |
214 |
tcagcttgcaatgctctgtttcattcttaagaggacattagcaacgagtttgtacaagctagttgcaaaactaattgggtaatgaggataatacttagct |
313 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
35267852 |
tcagcttgcaatgctctgtttcattcttaagaggacattagcaacgagtttgtacaagctagttacaaaactaattgggtaatgaggataatacttagct |
35267951 |
T |
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| Q |
314 |
ggatttatctttctttgcaccgcagtcaatagaagtatagttaaactcctgtccctggataaaacttatccaatc |
388 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||| |
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| T |
35267952 |
ggatttatctttctttgcaccgcagtcaataaaagtatagttaaactcttgtccctggataaaacttatccaatc |
35268026 |
T |
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