View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13978_high_34 (Length: 270)
Name: NF13978_high_34
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13978_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 255; Significance: 1e-142; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 2920717 - 2920971
Alignment:
| Q |
1 |
ataaaagataaagataagccccaagtgcattgcagcaaggaaactcactcaattcccagagaaagagagcaaaaataaactgatgatttctctacaaccc |
100 |
Q |
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| T |
2920717 |
ataaaagataaagataagccccaagtgcattgcagcaaggaaactcactcaattcccagagaaagagagcaaaaataaactgatgatttctctacaaccc |
2920816 |
T |
|
| Q |
101 |
tataaatcatgtcttcaaacaacatttgtattcagcccttcaaactttattacaaatcatagacacacacaaacaagcctgataggacaaaggaagataa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2920817 |
tataaatcatgtcttcaaacaacatttgtattcagcccttcaaactttattacaaatcatagacacacacaaacaagcctgataggacaaaggaagataa |
2920916 |
T |
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| Q |
201 |
aagtacatagaagaaatgtcaagtgcaatgcagaagaaaagaagagtgagaggag |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2920917 |
aagtacatagaagaaatgtcaagtgcaatgcagaagaaaagaagagtgagaggag |
2920971 |
T |
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