View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13978_high_37 (Length: 254)
Name: NF13978_high_37
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13978_high_37 |
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Alignment Details
Target: chr5 (Bit Score: 237; Significance: 1e-131; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 15142716 - 15142952
Alignment:
| Q |
1 |
tatagacgactatttcacatgtagtaacaaaatatgcttgtctgctacctatgctgtaaaggagatgcaaataagattggcattaaggttcggatttttt |
100 |
Q |
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| T |
15142716 |
tatagacgactatttcacatgtagtaacaaaatatgcttgtctgctacctatgctgtaaaggagatgcaaataagattggcattaaggttcggatttttt |
15142815 |
T |
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| Q |
101 |
atttcaattgtaataaggtttattggaggcagcatcgtcaagagtttgagttcaacttgtcttctttggggaaagcttggaaattctacgttaaatattt |
200 |
Q |
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| T |
15142816 |
atttcaattgtaataaggtttattggaggcagcatcgtcaagagtttgagttcaacttgtcttctttggggaaagcttggaaattctacgttaaatattt |
15142915 |
T |
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| Q |
201 |
ttatattatgtaagagtgttttttacaagagcttctt |
237 |
Q |
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| T |
15142916 |
ttatattatgtaagagtgttttttacaagagcttctt |
15142952 |
T |
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