View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13978_high_46 (Length: 237)
Name: NF13978_high_46
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13978_high_46 |
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Alignment Details
Target: chr3 (Bit Score: 210; Significance: 1e-115; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 210; E-Value: 1e-115
Query Start/End: Original strand, 16 - 229
Target Start/End: Complemental strand, 38919968 - 38919755
Alignment:
| Q |
16 |
aattcttaaaattcaaagcagttgaaccaacccaaataggtttcccccaaccaaaatcagcatcatacaaaggaaacctacacaaactggtaaaattaaa |
115 |
Q |
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| T |
38919968 |
aattcttaaaattcaaagcagttgaaccaacccaaataggtttcccccaaccaaaatcagcatcatacaaaggaaacctacacaaactggtaaaattaaa |
38919869 |
T |
|
| Q |
116 |
cacaaccaattcctccttcacaatcactctatcaaaactttccttaagaaattccaaatgctccttaccttcttgaaccttcttcacatattctttatca |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38919868 |
cacaaccaattcctccttcacaatcactctatcaaaactttccttaagaaattccaaatgctccttaccttcttgaaccttcttcacatattctttatca |
38919769 |
T |
|
| Q |
216 |
atcttcttcatctc |
229 |
Q |
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|||||||| ||||| |
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| T |
38919768 |
atcttctttatctc |
38919755 |
T |
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