View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13978_high_53 (Length: 227)
Name: NF13978_high_53
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13978_high_53 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 12952662 - 12952436
Alignment:
| Q |
1 |
catcaccgatttcagaattcgagagagcaaatctaatttcatgggctagacaacttgctcataatggaaaactcttggatcttgttgatagttctataca |
100 |
Q |
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| T |
12952662 |
catcaccgatttcagaattcgagagagcaaatctaatttcatgggctagacaacttgctcataatggaaaactcttggatcttgttgatagttctataca |
12952563 |
T |
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| Q |
101 |
ttctttggataaagaacaagcattgctatgtatcaccattgcattgctatgtttgcagagatctcctgggaaaaggccttccatgaaggagattgtaggg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
12952562 |
ttctttggataaagaacaagcattgctatgtatcaccattgcattgctatgtttgcagagatctcctgggaaaaggccttccatgaaggagattgtaggg |
12952463 |
T |
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| Q |
201 |
atgctttctggtgaagctgacccacct |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
12952462 |
atgctttctggtgaagctgacccacct |
12952436 |
T |
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