View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13978_low_31 (Length: 287)

Name: NF13978_low_31
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13978_low_31
NF13978_low_31
[»] chr2 (32 HSPs)
chr2 (1-277)||(32079338-32079614)
chr2 (21-209)||(9189731-9189918)
chr2 (21-209)||(9180652-9180839)
chr2 (4-257)||(19094374-19094627)
chr2 (23-209)||(29677363-29677548)
chr2 (21-198)||(19892405-19892581)
chr2 (21-209)||(1934921-1935108)
chr2 (21-198)||(10160664-10160839)
chr2 (21-198)||(18344411-18344587)
chr2 (21-209)||(31326719-31326905)
chr2 (22-209)||(12796906-12797092)
chr2 (37-208)||(25497255-25497424)
chr2 (21-207)||(25478228-25478412)
chr2 (17-198)||(7737790-7737970)
chr2 (21-198)||(30650909-30651085)
chr2 (21-198)||(30658243-30658419)
chr2 (21-170)||(42926726-42926876)
chr2 (23-209)||(29677749-29677934)
chr2 (21-198)||(19578353-19578529)
chr2 (21-198)||(28603278-28603459)
chr2 (37-209)||(21523653-21523818)
chr2 (21-197)||(35601902-35602077)
chr2 (21-170)||(35638964-35639112)
chr2 (104-208)||(17545227-17545331)
chr2 (30-137)||(5089268-5089373)
chr2 (96-252)||(27414969-27415124)
chr2 (21-139)||(30631559-30631676)
chr2 (96-169)||(13291508-13291581)
chr2 (96-137)||(40392373-40392414)
chr2 (96-137)||(42914696-42914737)
chr2 (4-44)||(3239099-3239139)
chr2 (21-165)||(40847567-40847710)
[»] chr7 (34 HSPs)
chr7 (1-216)||(4579468-4579682)
chr7 (1-257)||(23246813-23247068)
chr7 (21-198)||(26341179-26341355)
chr7 (96-257)||(6590863-6591024)
chr7 (37-209)||(44423065-44423236)
chr7 (21-198)||(44510616-44510792)
chr7 (38-198)||(23866065-23866224)
chr7 (24-165)||(8076033-8076173)
chr7 (21-209)||(4930213-4930400)
chr7 (37-198)||(13314175-13314335)
chr7 (24-208)||(27238225-27238408)
chr7 (37-198)||(12254075-12254235)
chr7 (37-198)||(9008159-9008319)
chr7 (21-197)||(9650904-9651082)
chr7 (96-209)||(12799464-12799577)
chr7 (39-170)||(8268291-8268421)
chr7 (23-198)||(25543301-25543475)
chr7 (21-177)||(29150914-29151069)
chr7 (125-209)||(42626519-42626603)
chr7 (39-208)||(3879995-3880161)
chr7 (106-209)||(30258164-30258267)
chr7 (104-198)||(26287084-26287178)
chr7 (125-209)||(13142829-13142913)
chr7 (21-206)||(10388298-10388480)
chr7 (4-69)||(1265333-1265398)
chr7 (21-209)||(3357559-3357747)
chr7 (104-209)||(3284789-3284895)
chr7 (123-257)||(16372475-16372608)
chr7 (124-190)||(21671277-21671343)
chr7 (87-197)||(48064075-48064185)
chr7 (96-137)||(24528408-24528449)
chr7 (96-137)||(32212654-32212695)
chr7 (93-137)||(33226465-33226509)
chr7 (132-184)||(45748595-45748647)
[»] chr3 (44 HSPs)
chr3 (24-209)||(55431296-55431480)
chr3 (21-198)||(7571157-7571333)
chr3 (21-209)||(23666051-23666238)
chr3 (21-209)||(24038299-24038486)
chr3 (37-198)||(39775667-39775827)
chr3 (21-209)||(49971352-49971539)
chr3 (21-198)||(8069658-8069833)
chr3 (21-198)||(3672564-3672740)
chr3 (21-198)||(3692596-3692772)
chr3 (21-209)||(758296-758483)
chr3 (21-197)||(18467203-18467378)
chr3 (21-198)||(3033622-3033798)
chr3 (21-198)||(8883148-8883324)
chr3 (21-198)||(18471986-18472161)
chr3 (21-209)||(3657168-3657355)
chr3 (21-209)||(14438623-14438810)
chr3 (21-170)||(29715622-29715770)
chr3 (21-209)||(3418973-3419160)
chr3 (93-209)||(27708985-27709101)
chr3 (21-209)||(32474608-32474793)
chr3 (21-198)||(8887908-8888084)
chr3 (96-209)||(23661392-23661505)
chr3 (23-207)||(20520034-20520217)
chr3 (21-209)||(29350218-29350405)
chr3 (1-191)||(28940107-28940296)
chr3 (23-198)||(12971572-12971746)
chr3 (21-198)||(12965812-12965988)
chr3 (106-198)||(6596296-6596388)
chr3 (127-209)||(46964098-46964180)
chr3 (21-150)||(12112628-12112756)
chr3 (30-137)||(26962049-26962154)
chr3 (36-137)||(38436991-38437090)
chr3 (58-155)||(16013724-16013821)
chr3 (114-206)||(55325846-55325938)
chr3 (37-157)||(17026085-17026204)
chr3 (37-157)||(28125111-28125231)
chr3 (36-137)||(53119523-53119622)
chr3 (96-137)||(4117600-4117641)
chr3 (96-137)||(13022081-13022122)
chr3 (1-256)||(20507614-20507865)
chr3 (96-137)||(20810426-20810467)
chr3 (133-198)||(25726727-25726792)
chr3 (129-209)||(2207677-2207757)
chr3 (21-93)||(27708856-27708928)
[»] scaffold0002 (2 HSPs)
scaffold0002 (21-198)||(4054-4230)
scaffold0002 (96-209)||(443874-443985)
[»] chr5 (38 HSPs)
chr5 (21-209)||(12103005-12103192)
chr5 (21-198)||(7451738-7451914)
chr5 (21-198)||(26667252-26667428)
chr5 (21-198)||(26938849-26939025)
chr5 (21-198)||(556675-556851)
chr5 (21-198)||(561447-561623)
chr5 (21-198)||(29167912-29168088)
chr5 (21-198)||(36937450-36937626)
chr5 (21-209)||(41587090-41587275)
chr5 (37-198)||(6155358-6155518)
chr5 (21-198)||(36942204-36942380)
chr5 (51-209)||(35679804-35679960)
chr5 (37-209)||(6514529-6514700)
chr5 (38-198)||(32461488-32461647)
chr5 (21-209)||(37248724-37248910)
chr5 (23-198)||(36428691-36428865)
chr5 (23-198)||(39518392-39518566)
chr5 (23-198)||(39523031-39523205)
chr5 (40-198)||(12041871-12042028)
chr5 (24-198)||(12501838-12502011)
chr5 (21-198)||(36423617-36423793)
chr5 (23-198)||(40147877-40148051)
chr5 (21-139)||(37652828-37652945)
chr5 (21-198)||(3665912-3666088)
chr5 (21-198)||(12045078-12045254)
chr5 (21-198)||(41996645-41996816)
chr5 (21-198)||(42001414-42001585)
chr5 (31-208)||(20180992-20181168)
chr5 (21-209)||(10759749-10759934)
chr5 (16-165)||(12102803-12102951)
chr5 (109-198)||(11981219-11981308)
chr5 (37-197)||(16116189-16116348)
chr5 (40-137)||(24435869-24435964)
chr5 (12-196)||(15468490-15468673)
chr5 (40-137)||(13582690-13582785)
chr5 (108-194)||(4871988-4872074)
chr5 (36-137)||(7805067-7805166)
chr5 (1-49)||(15148538-15148586)
[»] scaffold0352 (1 HSPs)
scaffold0352 (21-207)||(7084-7269)
[»] chr4 (39 HSPs)
chr4 (23-209)||(37264492-37264677)
chr4 (21-209)||(31269014-31269201)
chr4 (21-209)||(31273501-31273688)
chr4 (21-198)||(5271358-5271534)
chr4 (21-209)||(37259805-37259992)
chr4 (23-198)||(8693693-8693867)
chr4 (42-209)||(31729315-31729481)
chr4 (23-218)||(42758674-42758868)
chr4 (5-208)||(2819808-2820010)
chr4 (21-198)||(16421009-16421185)
chr4 (21-209)||(51697897-51698083)
chr4 (23-198)||(33463295-33463469)
chr4 (23-209)||(47244230-47244415)
chr4 (21-198)||(8030415-8030591)
chr4 (24-155)||(12878222-12878352)
chr4 (37-198)||(5928158-5928318)
chr4 (21-198)||(47574605-47574781)
chr4 (24-165)||(12874522-12874662)
chr4 (21-197)||(13521929-13522107)
chr4 (104-209)||(19102039-19102144)
chr4 (21-154)||(31765866-31765998)
chr4 (37-198)||(48276588-48276743)
chr4 (24-209)||(55251703-55251886)
chr4 (37-198)||(19541100-19541260)
chr4 (21-154)||(19906231-19906363)
chr4 (21-198)||(32082030-32082205)
chr4 (21-209)||(13059390-13059576)
chr4 (21-140)||(12823892-12824010)
chr4 (104-216)||(9362393-9362505)
chr4 (1-196)||(32545054-32545249)
chr4 (104-209)||(16948063-16948168)
chr4 (37-135)||(10120811-10120907)
chr4 (40-137)||(653043-653138)
chr4 (24-170)||(33468940-33469085)
chr4 (178-265)||(16954437-16954525)
chr4 (1-93)||(52691098-52691190)
chr4 (131-198)||(40840417-40840483)
chr4 (104-209)||(4551059-4551164)
chr4 (36-69)||(41816780-41816813)
[»] chr8 (39 HSPs)
chr8 (4-209)||(19166597-19166801)
chr8 (37-209)||(36683575-36683746)
chr8 (1-216)||(15875589-15875803)
chr8 (1-216)||(17953793-17954008)
chr8 (21-209)||(44925852-44926038)
chr8 (23-198)||(31449805-31449979)
chr8 (21-209)||(1807452-1807640)
chr8 (21-198)||(17025915-17026091)
chr8 (21-198)||(17556407-17556583)
chr8 (22-198)||(40125824-40125999)
chr8 (21-208)||(18876296-18876481)
chr8 (21-206)||(33416527-33416710)
chr8 (21-208)||(23548561-23548747)
chr8 (23-197)||(1910909-1911082)
chr8 (21-198)||(28559593-28559769)
chr8 (37-209)||(38182165-38182336)
chr8 (106-253)||(18259898-18260044)
chr8 (21-168)||(24090607-24090753)
chr8 (30-137)||(31030518-31030623)
chr8 (24-139)||(43302716-43302831)
chr8 (24-170)||(34118449-34118594)
chr8 (106-170)||(12820403-12820467)
chr8 (37-198)||(28564758-28564920)
chr8 (37-198)||(28572381-28572543)
chr8 (123-198)||(43302630-43302705)
chr8 (40-209)||(2965629-2965797)
chr8 (4-61)||(5883962-5884019)
chr8 (4-165)||(7902527-7902686)
chr8 (122-269)||(17793533-17793686)
chr8 (142-198)||(4238280-4238336)
chr8 (142-198)||(4243019-4243075)
chr8 (1-49)||(27415468-27415515)
chr8 (30-137)||(33616727-33616832)
chr8 (21-93)||(40130729-40130801)
chr8 (1-55)||(12820308-12820362)
chr8 (145-198)||(10933534-10933587)
chr8 (96-137)||(13584412-13584453)
chr8 (96-137)||(29220318-29220359)
chr8 (21-113)||(4238339-4238430)
[»] chr6 (32 HSPs)
chr6 (38-198)||(24589103-24589262)
chr6 (17-209)||(12688947-12689138)
chr6 (21-209)||(33687531-33687718)
chr6 (23-209)||(29892189-29892374)
chr6 (21-198)||(6407800-6407975)
chr6 (21-209)||(11570677-11570864)
chr6 (21-198)||(2700046-2700221)
chr6 (61-209)||(17964487-17964634)
chr6 (24-198)||(8747765-8747938)
chr6 (48-198)||(14508991-14509140)
chr6 (37-209)||(20748213-20748383)
chr6 (61-200)||(16836093-16836231)
chr6 (23-170)||(21309013-21309159)
chr6 (123-209)||(11534639-11534725)
chr6 (123-209)||(11560149-11560235)
chr6 (110-209)||(4157297-4157396)
chr6 (121-207)||(25316494-25316579)
chr6 (121-207)||(26203988-26204073)
chr6 (21-170)||(12406320-12406468)
chr6 (21-198)||(13736617-13736793)
chr6 (37-177)||(22695231-22695370)
chr6 (23-170)||(11614059-11614205)
chr6 (1-198)||(9751747-9751944)
chr6 (36-137)||(13605092-13605191)
chr6 (21-102)||(11428023-11428104)
chr6 (97-216)||(15991661-15991780)
chr6 (97-216)||(15999323-15999442)
chr6 (30-69)||(31476081-31476120)
chr6 (35-69)||(6113039-6113073)
chr6 (106-163)||(22609632-22609689)
chr6 (30-67)||(31495909-31495946)
chr6 (30-67)||(31501295-31501332)
[»] scaffold0182 (1 HSPs)
scaffold0182 (21-198)||(9826-10002)
[»] chr1 (30 HSPs)
chr1 (23-210)||(19798940-19799126)
chr1 (21-209)||(16649541-16649727)
chr1 (17-173)||(47455350-47455505)
chr1 (21-269)||(38620673-38620915)
chr1 (21-198)||(23192757-23192932)
chr1 (17-198)||(39588306-39588486)
chr1 (17-198)||(47451164-47451344)
chr1 (39-209)||(33301108-33301277)
chr1 (21-210)||(10135436-10135624)
chr1 (123-209)||(8138020-8138106)
chr1 (21-191)||(51041409-51041576)
chr1 (21-198)||(26927661-26927837)
chr1 (105-209)||(25843819-25843923)
chr1 (21-197)||(40165960-40166135)
chr1 (23-146)||(18784540-18784661)
chr1 (21-170)||(10140069-10140217)
chr1 (124-198)||(16833566-16833640)
chr1 (24-177)||(12259979-12260131)
chr1 (37-170)||(16035604-16035736)
chr1 (30-137)||(39747165-39747270)
chr1 (36-138)||(10106099-10106199)
chr1 (104-162)||(5346725-5346783)
chr1 (104-198)||(28434513-28434607)
chr1 (21-113)||(3094094-3094185)
chr1 (142-198)||(3094188-3094244)
chr1 (30-137)||(14582089-14582194)
chr1 (21-93)||(25855151-25855223)
chr1 (30-137)||(38734265-38734370)
chr1 (21-147)||(8900234-8900359)
chr1 (96-137)||(26651166-26651207)
[»] scaffold0045 (1 HSPs)
scaffold0045 (21-198)||(83046-83222)
[»] scaffold0057 (1 HSPs)
scaffold0057 (57-190)||(35650-35782)
[»] scaffold0015 (1 HSPs)
scaffold0015 (1-265)||(8852-9114)
[»] scaffold1050 (1 HSPs)
scaffold1050 (93-198)||(1191-1296)
[»] scaffold0184 (1 HSPs)
scaffold0184 (5-265)||(2273-2531)
[»] scaffold0012 (1 HSPs)
scaffold0012 (37-198)||(166025-166185)
[»] scaffold0008 (1 HSPs)
scaffold0008 (123-216)||(255898-255991)
[»] scaffold0054 (2 HSPs)
scaffold0054 (106-198)||(29219-29311)
scaffold0054 (23-209)||(25381-25566)
[»] scaffold0132 (2 HSPs)
scaffold0132 (36-137)||(2772-2871)
scaffold0132 (36-137)||(10732-10831)
[»] scaffold0011 (3 HSPs)
scaffold0011 (127-165)||(155490-155528)
scaffold0011 (30-137)||(1555-1660)
scaffold0011 (96-137)||(7100-7141)
[»] scaffold0128 (1 HSPs)
scaffold0128 (61-165)||(13292-13395)
[»] scaffold2020 (1 HSPs)
scaffold2020 (106-157)||(435-486)
[»] scaffold0009 (1 HSPs)
scaffold0009 (106-157)||(165009-165060)


Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 1 - 277
Target Start/End: Original strand, 32079338 - 32079614
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  32079338 ttgaaaaagaattttcatccaccgaagttattattgggctgagtcacgatcaggttgctctctttaagaaattttgtgacgctgtccaaaatttatgtaa 32079437  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccct 200  Q
    |||||||||||||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  32079438 ggtagactatcaatcacgttgtctccaggataaaaaaggttcagctacaactgtgcgattaactattgcattatagctaatcgttcgagaattacaccct 32079537  T
Q  201 taaatatggctattaaagtcattcgaatttaacattgaaatcattttaatatggtaccgtgaccactctctattata 277  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||    
T  32079538 taaatatggctattaaggtaattcgaatttaacattgaaatcattttaatatggtattgtgaccactctctgttata 32079614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 9189918 - 9189731
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| |||||||||||||||||||  ||||||| | ||||||||||||  ||||||| |||||||||| |||||     
T  9189918 accgaagttgttactaggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgtccaaaattg-tgcaaggcagactatcaaccacgcc 9189820  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  |||||||||||||  ||||||||| |||| | |||| |||||||||||||||||||||| ||||||||    
T  9189819 gcctccaggataaaacaagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatgg 9189731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 9180839 - 9180652
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||||||||||||  ||||||| |||||||||| |||||     
T  9180839 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattg-tgcaaggcagactatcaaccacgcc 9180741  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  |||||||||||||  ||||||||| |||| | |||| |||||||||||||||||||||| ||||||||    
T  9180740 gcctccaggataaaacaagcccagctacaactgtttgattaactactgcactgtagaaaatcgttcgagaattacaccctcaaatatgg 9180652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 4 - 257
Target Start/End: Complemental strand, 19094627 - 19094374
Alignment:
Q  4 aaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggt 103  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||||| |||||| |||| |  |||  ||   ||| ||||||||  |||||||     
T  19094627 aaaaataattttcatctaccgaagttgttattaggttgagtcacgatcaggtcgctctccttaaaacgttttttggtactgcccaaaattg-tgcaaggc 19094529  T
Q  104 agactatcaatcacgctgtctccaggataaaa-caagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccctta 202  Q
    | | |||||| ||| | | ||||||||||||| |||| |||||||||||||||||||||| || |||| | |||| || ||||||||||||||||||| |    
T  19094528 aaaatatcaaccacaccgcctccaggataaaaacaagctcagctacaactgtgcgattaattactgcactgtagaaaaccgttcgagaattacaccctca 19094429  T
Q  203 aatatggctattaaagtcattcgaatttaacattgaaatcattttaatatggtac 257  Q
    |||||||||||||| | || || ||||||| | ||||| |||| | |||||||||    
T  19094428 aatatggctattaaggccactccaatttaatactgaaaccattattatatggtac 19094374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 29677363 - 29677548
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | |||||||||||||||| || |||||||||||||  ||||||| | ||| ||||||||  ||||| | |||||||||| ||||| |     
T  29677363 cgaagttgttactaggttgagtcacgatcatgtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaagcagactatcaaccacgccgc 29677461  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||| |||| |||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  29677462 ctccaggataaaataagtccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 29677548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 19892581 - 19892405
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||||||||||||  |||||   |||||||||| |||||     
T  19892581 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcctggcactgtccaaaattg-tgcaacacagactatcaaccacgcc 19892483  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||||||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  19892482 gcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacc 19892405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 1935108 - 1934921
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| |||||     
T  1935108 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 1935010  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  1935009 gcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 1934921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 10160839 - 10160664
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  10160839 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 10160741  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||| |||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  10160740 gcctccaggataaaacaagctcagctgcaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacacc 10160664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 18344411 - 18344587
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | | ||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| ||||||| || |||||     
T  18344411 accgaagttgttactagattgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactattaaccacgcc 18344509  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  18344510 ggctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacc 18344587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 31326719 - 31326905
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| ||||||||  ||||||| |||||||||| |||||     
T  31326719 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatgccactgcccaaaattg-tgcaaggcagactatcaaccacgcc 31326817  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
      |||||||||||||||||  || ||||||||||||||||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  31326818 acctccaggataaaacaagcccaactacaactgtgcgattaactactgcact-tagaaaaccgttcgagaattacaccctcaaatatgg 31326905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 22 - 209
Target Start/End: Original strand, 12796906 - 12797092
Alignment:
Q  22 ccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctg 121  Q
    |||||||| ||||| ||||||||||||| ||| | |||||||||||||  ||| ||| | ||| ||||||||  | ||||  |||||||||| ||||| |    
T  12796906 ccgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactgcccaaaattgtt-caagacagactatcaaccacgccg 12797004  T
Q  122 tctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||||| | |||||||||||||| ||||||| ||||   |||| || ||||||||||||||||||| ||||||||    
T  12797005 tctccaggataaaacaagtccggctacaactgtgcggttaactactgcaccgtagaaaaccgttcgagaattacaccctcaaatatgg 12797092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 208
Target Start/End: Complemental strand, 25497424 - 25497255
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||| |||||||||||||  |||||| || ||| ||||| ||| ||||||  |||||||||| ||||| | ||||||||||||||    
T  25497424 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtaacactgcccaaa-tttgtgcaagtcagactatcaaccacgccgcctccaggataaaac 25497326  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatg 208  Q
    |||  |||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| |||||||    
T  25497325 aagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatg 25497255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 21 - 207
Target Start/End: Complemental strand, 25478412 - 25478228
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||| | ||||| |||||||||||||  ||||||||| ||| ||||||||  ||||||| |||||||||| |||||     
T  25478412 accgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtgacactgcccaaaattg-tgcaaggcagactatcaaccacgcc 25478314  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatat 207  Q
    | |||||| ||||||||||  ||||||||||||||||| |||||| |||| | |||| || ||||| ||||||||||||| ||||||    
T  25478313 gcctccagaataaaacaagcccagctacaactgtgcgaataacta-tgcactgtagaaaaccgttcaagaattacaccctcaaatat 25478228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 7737970 - 7737790
Alignment:
Q  17 atccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatca 116  Q
    ||||||||||||| ||| | ||||||||||||| || || |||||||||||||| ||| ||| | ||| ||||||||  ||||||  |||||||||| ||    
T  7737970 atccaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagaagttttgtggcactgcccaaaattg-tgcaagacagactatcaacca 7737872  T
Q  117 cgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| | |||||||||||||||||  || |||||| ||| ||||||||||||||| | |||| || |||||||||||||||||    
T  7737871 cgccgcctccaggataaaacaagcccaactacaattgttcgattaactattgcactgtagaaaaccgttcgagaattacacc 7737790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 30650909 - 30651085
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| | |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  30650909 accgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 30651007  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||| |||||||||||  ||||||||||||| |||||||||| ||||   |||| ||||||||||||||||||||    
T  30651008 gcctccaagataaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattacacc 30651085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 30658243 - 30658419
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| |  |||||||||||| ||||| |||||||||||||  ||||||| | ||   |||||||  ||||||| |||||||||| |||||     
T  30658243 accgaagttgttactatgttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactactcaaaattg-tgcaaggcagactatcaaccacgcc 30658341  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  30658342 gcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 30658419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 42926876 - 42926726
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaa--tttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacg 118  Q
    ||||||||| ||| | ||||||||||||||||||  ||||||||||||| |  ||||||| | ||| ||||||||  |||||||||||||||||| ||||    
T  42926876 accgaagttgttactaggttgagtcacgatcaggccgctctctttaagacacgtttcgtggcactgcccaaaattg-tgcaaggtagactatcaaccacg 42926778  T
Q  119 ctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    | | ||||||||||| ||||| ||| ||||||||||||| ||||||| ||||    
T  42926777 ccgcctccaggataatacaagctcaactacaactgtgcggttaactactgca 42926726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 29677749 - 29677934
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||| |||||| |||| ||| | ||| |||||| || ||||||| | |||||||| || || |     
T  29677749 cgaagttgttactaggttgagtcacgaccaggtcgctctcattaagacatttagtggcactg-ccaaaaattgtgcaaggcaaactatcaaccaagccgc 29677847  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    || |||||||||| |||  |||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||  ||||||||    
T  29677848 ctacaggataaaaaaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacccacaaatatgg 29677934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 19578529 - 19578353
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||||| ||||||||||||| ||| | |||||||||||||  ||| ||| | ||  | ||||||  ||||||| |||||||||| || |||    
T  19578529 accgaagttgttattaggttgagtcacgaccagatcgctctctttaagacgttttgtggcactacctaaaattg-tgcaaggaagactatcaaccatgct 19578431  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||| |||||||||| || |||||| || ||| |||||||||||| | |||| |||||||||||| |||||||    
T  19578430 gcctccagggtaaaacaagtccaactacaattgggcggttaactattgcactgtagaaaatcgttcgagatttacacc 19578353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 28603278 - 28603459
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacg-- 118  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||||||||| |  ||||||||| |||||||||| || ||||||  |||||||||| ||||      
T  28603278 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgtttcgtgacactgtccaaaa-ttgtgcaagacagactatcaaccacgct 28603376  T
Q  119 --ctgtctccaggat-aaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
      ||  ||||||||| ||||||||||||||||||||||| |||||||||| |||| | || | || ||||| |||||||||||    
T  28603377 acctacctccaggataaaaacaagttcagctacaactgttcgattaactactgcactgtaaaaaaccgttcaagaattacacc 28603459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 21523818 - 21523653
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||||||| ||||||| |  ||||||| | ||| ||||||||  ||||||| |||||||||| ||||| |  || ||| ||||||    
T  21523818 ggttgagtcacgaccaggttgctatctttaa-acgtttcgtggcactgcccaaaattg-tgcaagggagactatcaaccacgccgcttctaggttaaaac 21523721  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||||||| ||||||| ||     |||| |||||||||||| ||||||||| ||||||||    
T  21523720 aagttcagctacaactgtgcggttaactactg-----tagaaaatcgttcgagatttacaccctcaaatatgg 21523653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 35601902 - 35602077
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||| |||||| ||||| ||||| |||||||  ||||||| | ||||||||||||  ||||||  ||| |||||| |||||     
T  35601902 accgaagttgttactaggttgaatcacgaccaggtcgctctttttaagacgtttcgtggcactgtccaaaattg-tgcaagacagagtatcaaccacgcc 35602000  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    | ||||||||||||||||   ||||||||| ||| |||||||||| |||| | |||| || ||||||||||||||||    
T  35602001 gcctccaggataaaacaaacccagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacac 35602077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 35639112 - 35638964
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| |  ||||| |||||||||||| ||||| |||||||  ||||||| | ||| ||||||||  ||||||  ||  |||||| |||||     
T  35639112 accgaagttgttactaagttgaatcacgatcaggtcgctctttttaagacgtttcgtggcactgcccaaaattg-tgcaagacagcgtatcaaccacgcc 35639014  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    | ||||||||||||||||| |||||||||||||| |||||||||| ||||    
T  35639013 gcctccaggataaaacaagctcagctacaactgttcgattaactactgca 35638964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 104 - 208
Target Start/End: Complemental strand, 17545331 - 17545227
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaa 203  Q
    |||||||||| |||||   ||| |||||||||||||  || ||||||| ||||| |||||||  ||||| |||| |||| ||||||| ||||||||| ||    
T  17545331 agactatcaaccacgccacctcgaggataaaacaagcacatctacaacagtgcggttaactaacgcattgtagaaaatcattcgagatttacaccctcaa 17545232  T
Q  204 atatg 208  Q
    |||||    
T  17545231 atatg 17545227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 5089268 - 5089373
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| || |||||||| || ||||| |||||||||||||  ||||| | | || |||||   || |||||||||||||| ||| ||||| |||||||||    
T  5089268 attatcggattgagtcatgaccaggtcgctctctttaagacgtttcgcggcactatccaag--ttgtgcaaggtagactaacaaccacgccgtctccagg 5089365  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  5089366 ataaaaca 5089373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 96 - 252
Target Start/End: Complemental strand, 27415124 - 27414969
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattac 195  Q
    ||||||| ||||||| ||| |||  || ||| |||| ||||||||| ||| |||||||||||||| |||| ||  || ||| ||| |||| | |||||||    
T  27415124 tgcaaggcagactatgaataacgtcgtttcctggatgaaacaagtttagcgacaactgtgcgatttactactg-tttgtagttaaccgtttgtgaattac 27415026  T
Q  196 acccttaaatatggctattaaagtcattcgaatttaacattgaaatcattttaatat 252  Q
    ||| | ||||||| ||||||| | || || ||||||| | |||||||| | ||||||    
T  27415025 accatcaaatatgactattaaggccactcaaatttaatactgaaatcactctaatat 27414969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 139
Target Start/End: Original strand, 30631559 - 30631676
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||||||||||| ||||  |||||||||| |  ||||||| |  || |||||| || ||||||  |||||||||| |||||     
T  30631559 accgaagttgttactaggttgagtcacgattaggtcactctctttaaaacttttcgtggcattg-ccaaaaattgtgcaagaaagactatcaaccacgcc 30631657  T
Q  121 gtctccaggataaaacaag 139  Q
      |||||||||||||||||    
T  30631658 acctccaggataaaacaag 30631676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 169
Target Start/End: Complemental strand, 13291581 - 13291508
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgc 169  Q
    |||||| || |||||||| ||||| | | | | |||| || |||||||||||||||| ||||||||||||||||    
T  13291581 tgcaagataaactatcaaccacgccgccactatgatagaataagttcagctacaactatgcgattaactattgc 13291508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 40392373 - 40392414
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  40392373 tgcaaggtagactagcaaccacgccgtctccaggataaaaca 40392414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 42914696 - 42914737
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  42914696 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 42914737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 44
Target Start/End: Complemental strand, 3239139 - 3239099
Alignment:
Q  4 aaaaagaattttcatccaccgaagttattattgggttgagt 44  Q
    |||| ||||||||| ||| ||||||||||||||||||||||    
T  3239139 aaaacgaattttcagccatcgaagttattattgggttgagt 3239099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 165
Target Start/End: Complemental strand, 40847710 - 40847567
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | | ||||||||||| || || | |||||||||||  ||| ||| | |||| |||| ||  ||||||| | |||||||| |||||     
T  40847710 accgaagttgttactagattgagtcacgaccatgtcgttctctttaagacgttttgtggcactgttcaaagttg-tgcaaggcaaactatcaaccacgcc 40847612  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaacta 165  Q
      |||| ||||||||||||| || ||||||||||| | |||||||    
T  40847611 acctcctggataaaacaagtccaactacaactgtgtggttaacta 40847567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 7e-52; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 4579468 - 4579682
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    |||||||| |||||||||| | ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  |||||    
T  4579468 ttgaaaaataattttcatctatcgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaa 4579566  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccct 200  Q
    || |||||||||| ||||| | |||||||||||||||||| |||||||||||||||||||||||| |||| | |||| || ||||| |||||||||||||    
T  4579567 ggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgcgattaactactgcactgtagaaaaccgttcaagaattacaccct 4579666  T
Q  201 taaatatggctattaa 216  Q
     |||||||||||||||    
T  4579667 caaatatggctattaa 4579682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 257
Target Start/End: Complemental strand, 23247068 - 23246813
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    |||||||| |||||||||| ||||||||| ||| | | ||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  |||||    
T  23247068 ttgaaaaataattttcatctaccgaagttgttactagattgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattg-tgcaa 23246970  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccct 200  Q
    || |||||||||| ||||| | ||||||||||||||||| ||| ||||||||||||||||||||| ||  ||||||| || ||||| | |||||||||||    
T  23246969 ggcagactatcaaccacgccgcctccaggataaaacaagctcacctacaactgtgcgattaactactgttttatagaaaaccgttccaaaattacaccct 23246870  T
Q  201 taaatatggctattaaagtcattcgaatttaacattgaaatcattttaatatggtac 257  Q
     |||||||||||| || | || ||| |||||| ||||||| || | | |||||||||    
T  23246869 caaatatggctataaaggccactcggatttaatattgaaaccactattatatggtac 23246813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 26341179 - 26341355
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||||||||||| |||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  26341179 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 26341277  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||| ||||||||||||| |||||||||| | || | |||| |||| ||| |||||||||||    
T  26341278 gcctccaggataaaacaagtccagctacaactgttcgattaactactacactgtagaaaatcattcaagaattacacc 26341355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 96 - 257
Target Start/End: Complemental strand, 6591024 - 6590863
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattac 195  Q
    ||||||| |||||||||| ||||| | || ||||||||||||||||||| || ||||||| ||||||||| | |||| |||| ||||||| |||||||||    
T  6591024 tgcaaggcagactatcaaccacgccgccttcaggataaaacaagttcagttataactgtgtgattaactactacattgtagaaaatcgtttgagaattac 6590925  T
Q  196 acccttaaatatggctattaaagtcattcgaatttaacattgaaatcattttaatatggtac 257  Q
    ||||| ||||||||||||||| | || |||||||||| | ||||| |||| | |||||||||    
T  6590924 accctcaaatatggctattaaggccactcgaatttaatactgaaaccattattatatggtac 6590863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 44423236 - 44423065
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||||||| | |||||||||||||  ||||||| | ||| ||||||||  | ||||| ||||||||||  |||| | ||||||||||||||    
T  44423236 ggttgagtcacgatcagatcgctctctttaagacgtttcgtggcactgaccaaaattgtt-caaggcagactatcaactacgccgcctccaggataaaac 44423138  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||| || ||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  44423137 aagtccatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 44423065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 44510792 - 44510616
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| |||||||||||||||  ||| ||| | ||||||||||||  ||||||  |||||||||| |||||     
T  44510792 accgaagttgttactaggttgagtcacgaccagattgctctctttaagacgttttgtggcactgtccaaaattg-tgcaagacagactatcaaccacgcc 44510694  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||| |||||||||| ||||||  |||| | |||| || |||||||||||||||||    
T  44510693 gcctccaggataaaacaagctcagctgcaactgtgcggttaacttctgcactgtagaaaaccgttcgagaattacacc 44510616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 198
Target Start/End: Original strand, 23866065 - 23866224
Alignment:
Q  38 gttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| ||||| | |||||||||||||||    
T  23866065 gttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgccgcctccaggataaaaca 23866163  T
Q  138 agttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    || |||||| |||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  23866164 agctcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 23866224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 8076033 - 8076173
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| ||||||||||||||| ||||| |||||||||||||  ||||||| | ||| | ||||||  ||||||  |||||||||| ||||||| |    
T  8076033 gaagttgttactgggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattg-tgcaagacagactatcaaccacgctgcc 8076131  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaacta 165  Q
    |||||||||||||||| |||||| ||||||||||||||||||    
T  8076132 tccaggataaaacaagctcagctgcaactgtgcgattaacta 8076173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 4930213 - 4930400
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  || |||  | |||||||| |||||     
T  4930213 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgtaagtcatactatcaaccacgcc 4930311  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  || ||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| | ||||||    
T  4930312 gcctccaggataaaacaagcccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcatatatgg 4930400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 13314335 - 13314175
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||| | |||||||||||||  |||||||   ||| ||||||||  |||||||||||||||||  ||||  | ||||||||||||||    
T  13314335 ggttgagtcacgaccagatcgctctctttaagacgtttcgtggtactgcccaaaattg-tgcaaggtagactatcagccacgtcgcctccaggataaaac 13314237  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| |||||||||||||| | |||||||| |||| | |||| || |||||||||||||||||    
T  13314236 aagctcagctacaactgttcaattaactactgcactgtagaaaaccgttcgagaattacacc 13314175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 208
Target Start/End: Original strand, 27238225 - 27238408
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | ||||||||||||| ||||| |||||||||||||  ||| ||| | |||  |||||||  || |||| |||||||||||||||| | |    
T  27238225 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgctcaaaattg-tgtaaggcagactatcaatcacgccgcc 27238323  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatg 208  Q
    | || |||||||||||| |||||||||||| | | ||||||| |||| | |||| |||||||||||| ||||||||| |||||||    
T  27238324 tgcaagataaaacaagtccagctacaactgcgtgcttaactactgcactgtagaaaatcgttcgagatttacaccctcaaatatg 27238408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 12254075 - 12254235
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||| ||| ||||| |||||||||||||  ||| ||| | ||| || ||| || ||||||| |||||||||||||||| | || |||||||||||    
T  12254075 ggttgagtcgcgaccaggtcgctctctttaagatgttttgtggcactg-cctaaagttgtgcaaggcagactatcaatcacgccgcctacaggataaaac 12254173  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||||||||||| ||||||| |||  | |||| || |||| |||| |||||||    
T  12254174 aagttcagctacaactgtgcggttaactaatgctgtgtagaaaaccgtttgagatttacacc 12254235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 198
Target Start/End: Original strand, 9008159 - 9008319
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| || ||  ||||||||||||  ||| ||||| ||   |||||||  ||||||| || |||||||||| |  | ||||||||||||||    
T  9008159 ggttgagtcacgaccatgtccctctctttaagacgtttagtgacactactcaaaattg-tgcaaggcaggctatcaatcatgaagcctccaggataaaac 9008257  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||| || ||||||||||| ||||||||| |||| | |||| ||||||||||||||||||||    
T  9008258 aagtccaactacaactgtgtgattaactactgcactgtagaaaatcgttcgagaattacacc 9008319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 9651082 - 9650904
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| |||||| || ||||||  |||||||||| |||||     
T  9651082 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaa-ttgtgcaagacagactatcaaccacgcc 9650984  T
Q  121 gtctccaggataaaacaagttca---gctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    | |||||||||||||||||| ||   ||| ||||||| || || |||| |||| | |||| || ||||||||||||||||    
T  9650983 gcctccaggataaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattacac 9650904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 96 - 209
Target Start/End: Original strand, 12799464 - 12799577
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattac 195  Q
    ||||||| |||||||||| |||||    |||||||||||| |||| |||||||||||||||| ||||||| ||||||  ||| || ||||||||||||||    
T  12799464 tgcaaggcagactatcaaccacgccacatccaggataaaataagtccagctacaactgtgcggttaactactgcattgcagaaaaccgttcgagaattac 12799563  T
Q  196 acccttaaatatgg 209  Q
    ||||| ||||||||    
T  12799564 accctcaaatatgg 12799577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 39 - 170
Target Start/End: Original strand, 8268291 - 8268421
Alignment:
Q  39 ttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaa 138  Q
    ||||||||||| ||||| |||||||||||||  ||| ||| | ||||||||||||  ||||||  |||||||||| |||||   ||||| ||||||||||    
T  8268291 ttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgtccaaaattg-tgcaagacagactatcaaccacgccacctccatgataaaacaa 8268389  T
Q  139 gttcagctacaactgtgcgattaactattgca 170  Q
    || ||||||||||||| |||||||||| ||||    
T  8268390 gtccagctacaactgttcgattaactactgca 8268421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 25543475 - 25543301
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||| ||||||| || ||||||||||  |||||||   ||| | ||||||  |||||| || |||||||| |||   |     
T  25543475 cgaagttgttactaggttgagtcacaatcaggtcgcactctttaagacgtttcgtggtactgcctaaaattg-tgcaagataaactatcaaccacatcgc 25543377  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||||||||  ||||||||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  25543376 ctccaggataaaacaagtctagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 25543301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 177
Target Start/End: Original strand, 29150914 - 29151069
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| | ||||| |||||||  ||||||||| |||  |||||||  ||||||| | |||||||| ||||      
T  29150914 accgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgctcaaaattg-tgcaaggcaaactatcaaccacgtc 29151012  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattataga 177  Q
    | ||||| ||||||| ||||||||||||||||  ||| |||||| ||||||||||||    
T  29151013 gcctccaagataaaataagttcagctacaactacgcgcttaacttttgcattataga 29151069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 42626603 - 42626519
Alignment:
Q  125 ccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||| |||| |||||||||||||||| |||| || |||| | |||| |||||||||||||||||||||| ||||||||    
T  42626603 ccaggataaaataagtccagctacaactgtgcggttaattactgcactgtagaaaatcgttcgagaattacaccctcaaatatgg 42626519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 39 - 208
Target Start/End: Original strand, 3879995 - 3880161
Alignment:
Q  39 ttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaa 138  Q
    |||||||||||||||||  || |||||||||  ||| ||||| |||| |||||||| || |||| |||||||||| ||||| | |||||||||||   ||    
T  3879995 ttgagtcacgatcaggtcactttctttaagacgttttgtgacactgttcaaaatttgtgtaaggaagactatcaaccacgccgcctccaggataa---aa 3880091  T
Q  139 gttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatg 208  Q
    |  |  |||||||| || | ||||||| |||| | |||| ||||||||||||||||||| || |||||||    
T  3880092 gccccactacaactatgtggttaactactgcactgtagaaaatcgttcgagaattacactctcaaatatg 3880161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 106 - 209
Target Start/End: Original strand, 30258164 - 30258267
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaat 205  Q
    |||||||||||||| | |||||||||||||||||| |||||||||| ||||| ||||||| |||| | |||| ||| |||||| | ||||||| | ||||    
T  30258164 actatcaatcacgccgcctccaggataaaacaagtccagctacaacagtgcggttaactactgcactgtagaaaattgttcgaaatttacaccttcaaat 30258263  T
Q  206 atgg 209  Q
    ||||    
T  30258264 atgg 30258267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 26287178 - 26287084
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||| ||||| | |||||||||||||||| | |||||||||||||||  ||||||| |||| |||||| |||||||||||  |||||||    
T  26287178 agactatcaaccacgccgcctccaggataaaacaaatccagctacaactgtgcagttaactactgcactatagaaaatcgttcgagctttacacc 26287084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 13142913 - 13142829
Alignment:
Q  125 ccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||||||||||||||||  |  ||||||||||| |||||| ||  |||||||| ||||||| ||||||||||    
T  13142913 ccaggataaaacaagttcagctacaactgtaaggctaactattgcactatagaaaactgttcgagatttacaccgttaaatatgg 13142829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 206
Target Start/End: Complemental strand, 10388480 - 10388298
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||| ||| |  || ||||   || |||| | ||||| |||||  ||||     
T  10388480 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcattgcccaag--ttgtgcatgatagac-atcaacaacgcc 10388384  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaata 206  Q
    | ||||||||||||||||  ||| ||||||||||||||||||||| |||| | || | ||| |||||||| ||||||||| |||||    
T  10388383 gcctccaggataaaacaaactcaactacaactgtgcgattaactactgcactctaaaaaattgttcgagatttacaccctcaaata 10388298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 4 - 69
Target Start/End: Complemental strand, 1265398 - 1265333
Alignment:
Q  4 aaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaaga 69  Q
    ||||||||||||||||||||||| |||||  |||||||||| |||||||||||| ||| |||||||    
T  1265398 aaaaagaattttcatccaccgaatttattgatgggttgagttacgatcaggttgttctatttaaga 1265333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 3357747 - 3357559
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||| |   | | || ||| || ||||||| |||||||||| |||||     
T  3357747 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgcggtacag-cccaaagttgtgcaaggcagactatcaaccacgcc 3357649  T
Q  121 gtctccaggat-aaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||| ||| |||||||   || |||||| |||| | ||||| |||||| | |||| |||||||| ||| ||||||||| ||||||||    
T  3357648 gtctccatgataaaaacaaacacaactacaattgtgtggttaaccattgcactgtagaaaatcgttcaagatttacaccctaaaatatgg 3357559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 3284789 - 3284895
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaa-caagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccctta 202  Q
    |||||||||| ||| | |||| || ||||||| |||  ||||||||||| ||||| |||||||  |||  ||||| || ||||||||||||||||||| |    
T  3284789 agactatcaaccacaccgtcttcatgataaaaacaaactcagctacaaccgtgcggttaactaccgcacaatagaaaaccgttcgagaattacaccctca 3284888  T
Q  203 aatatgg 209  Q
    |||||||    
T  3284889 aatatgg 3284895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 123 - 257
Target Start/End: Original strand, 16372475 - 16372608
Alignment:
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatggctattaaagtcat 222  Q
    ||||| |||||||||||| |  ||||| || |||||||||||| | || | |||| ||||||| |||||||| ||| | ||||||||||||||| | ||     
T  16372475 ctccaagataaaacaagtgcgactaca-ctatgcgattaactacttcactgtagaaaatcgtttgagaattaaaccatcaaatatggctattaaggccac 16372573  T
Q  223 tcgaatttaacattgaaatcattttaatatggtac 257  Q
    |||||||||| | ||||| || | | |||||||||    
T  16372574 tcgaatttaatactgaaaccactattatatggtac 16372608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 190
Target Start/End: Original strand, 21671277 - 21671343
Alignment:
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgaga 190  Q
    ||||| |||||||||| ||| ||||||||||||| ||||||| |||| | |||| ||||||||||||    
T  21671277 tccagaataaaacaagctcacctacaactgtgcggttaactactgcagtgtagaaaatcgttcgaga 21671343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 87 - 197
Target Start/End: Complemental strand, 48064185 - 48064075
Alignment:
Q  87 caaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttc 186  Q
    |||||||| ||||||  ||||||||||||| |  |||||||  |||||||||||| | |||||||| | ||| |||||  ||||   ||| ||||| |||    
T  48064185 caaaatttgtgcaagacagactatcaatcatgtcgtctccacaataaaacaagtttatctacaactatacgactaacttctgcaccgtagctaatctttc 48064086  T
Q  187 gagaattacac 197  Q
    |||||||||||    
T  48064085 gagaattacac 48064075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 24528408 - 24528449
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  24528408 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 24528449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 32212695 - 32212654
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  32212695 tgcaaggtagactagcaaccgcgctgtctccaggataaaaca 32212654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 33226465 - 33226509
Alignment:
Q  93 ttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    ||||||||||||||||| ||| ||||| ||| |||||||||||||    
T  33226465 ttatgcaaggtagactaacaaccacgccgtcaccaggataaaaca 33226509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 45748647 - 45748595
Alignment:
Q  132 aaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgt 184  Q
    |||||||||||| |||||||| |||||||||||| |||| | |||| ||||||    
T  45748647 aaaacaagttcaactacaactatgcgattaactactgcactgtagaaaatcgt 45748595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 94; Significance: 6e-46; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 55431296 - 55431480
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||||| ||||||||||||||||||| |||||||||||||  ||||||||| ||||| |||||| |||||||| |||||||||| ||||| | |    
T  55431296 gaagttgttattaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacactgtcaaaaatt-atgcaaggcagactatcaaccacgccgcc 55431394  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||| |||||||||||||||| ||||||| |||| | |||| ||  ||||||||||| |||||| ||||||||    
T  55431395 tccaggataaaacaagtccagctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattgcaccctcaaatatgg 55431480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 7571333 - 7571157
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  ||||||||||||||||     
T  7571333 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaatcacgcc 7571235  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| ||||||||||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  7571234 gcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 7571157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 23666238 - 23666051
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  23666238 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 23666140  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  23666139 gcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 23666051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 24038486 - 24038299
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  24038486 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 24038388  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  24038387 gcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 24038299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 39775827 - 39775667
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| ||||| | ||||||||||||||    
T  39775827 ggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgccgcctccaggataaaac 39775729  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| |||||||||||||| |||||||||| |||| | |||| |||||||||| |||||||||    
T  39775728 aagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgaaaattacacc 39775667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 49971539 - 49971352
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| | |||||||||||  ||||||| | || |||||||||  ||||||| ||||||||||||||||     
T  49971539 accgaagttgttactaggttgagtcacgaccaggtcgatctctttaagacgtttcgtggcactatccaaaattg-tgcaaggcagactatcaatcacgcc 49971441  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||| ||||| |||||||||  ||||||| | || | |||| || ||||||||||||||||||| ||||||||    
T  49971440 gcctccaggataaaacaagtccagctgcaactgtgcagttaactacttcactgtagaaaaccgttcgagaattacaccctcaaatatgg 49971352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 8069658 - 8069833
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | |||||||||  || ||||||  |||||||||| |||||     
T  8069658 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaa--ttgtgcaagacagactatcaaccacgcc 8069755  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | ||||||| |||||||||||||||||    
T  8069756 gcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagataaccgttcgagaattacacc 8069833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 3672564 - 3672740
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| ||||||||  ||||||| |||||||||| |||||     
T  3672564 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 3672662  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  3672663 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 3672740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 3692596 - 3692772
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| ||||||||  ||||||| |||||||||| |||||     
T  3692596 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 3692694  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  3692695 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 3692772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 758483 - 758296
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| | |||||||||||||  ||||||| | ||  ||||||||  ||||||| |||||||||| |||||     
T  758483 accgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactacccaaaattg-tgcaaggcagactatcaaccacgcc 758385  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  758384 gcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 758296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 18467203 - 18467378
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| ||||||| || |||||     
T  18467203 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactattaaccacgcc 18467301  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    | |||||||||||||||||| || |||||| ||| |||||||||| |||| | |||| |||||||||||||||||||    
T  18467302 gcctccaggataaaacaagtccaactacaattgttcgattaactactgcactgtagaaaatcgttcgagaattacac 18467378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 3033622 - 3033798
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| ||||||||  ||||||| |||||||||| ||| |     
T  3033622 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattg-tgcaaggcagactatcaaccacacc 3033720  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||| ||||||||||||| |||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  3033721 gcctcaaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 3033798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 8883148 - 8883324
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||| ||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| ||||||    
T  8883148 accgaagttgttactaggtcgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgct 8883246  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  8883247 gcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 8883324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 18471986 - 18472161
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||| ||  || |||| | ||| | ||||||  ||||||| |||||||||| |||||     
T  18471986 accgaagttgttactaggttgagtcacgaccaggtcgctctctttacgatgtt-cgtggcactgcctaaaattg-tgcaaggcagactatcaaccacgcc 18472083  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||||| |||| ||||||||||||||||||||    
T  18472084 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcattgtagaaaatcgttcgagaattacacc 18472161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 3657355 - 3657168
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| |  ||||||||||||| || | |||||||||||||  ||||||| | |||| |||||||  ||||||  |||||||||| || ||     
T  3657355 accgaagttgttactatgttgagtcacgattagatcgctctctttaagacgtttcgtggcactgttcaaaattg-tgcaagacagactatcaaccatgcc 3657257  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
      ||||| |||||||||||| |||||||||||||  ||||||||| |||| | |||| |||||||||||||||||||||||||||||||    
T  3657256 acctccaagataaaacaagtccagctacaactgttagattaactactgcactgtagaaaatcgttcgagaattacacccttaaatatgg 3657168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 14438810 - 14438623
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| || ||||||||||  ||||||| | ||  ||||||||  ||||||| |||| ||||| |||||     
T  14438810 accgaagttgttactaggttgagtcacgaccaggtcgccctctttaagacgtttcgtggcactacccaaaattg-tgcaaggcagacaatcaaccacgcc 14438712  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  14438711 gcctccaggataaaacaagcccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 14438623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 29715622 - 29715770
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||||| ||||||||||||| ||| | ||||| |||||||  ||||||||| ||||||||||||  ||| ||| |||||||||| |||||     
T  29715622 accgaagttgttattaggttgagtcacgaccagatcgctctttttaagacgtttcgtgacactgtccaaaattg-tgctaggaagactatcaaccacgcc 29715720  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    | ||| |||||||||||||| |||||||| ||||||| ||||||||||||    
T  29715721 gcctctaggataaaacaagtccagctacagctgtgcggttaactattgca 29715770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 3418973 - 3419160
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| || || |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  3418973 accgaagttgttactaggttgagtcacgaccaagtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 3419071  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
      || |||||||||||||| ||| || |||||||||| |||||||||||||  |||| || |||| |||| ||||||||| ||||||||    
T  3419072 accttcaggataaaacaagctcaactgcaactgtgcggttaactattgcatcgtagaaaaccgtttgagatttacaccctcaaatatgg 3419160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 93 - 209
Target Start/End: Original strand, 27708985 - 27709101
Alignment:
Q  93 ttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaat 192  Q
    ||||||||||||||||||||| ||||| | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || |||||||||||    
T  27708985 ttatgcaaggtagactatcaaccacgccgcctccaggataaaacaagcccagcttcaactgtgcggttaactactgcactgtagaaaaccgttcgagaat 27709084  T
Q  193 tacacccttaaatatgg 209  Q
    |||||||| ||||||||    
T  27709085 tacaccctcaaatatgg 27709101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 32474793 - 32474608
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | | ||||| ||||| ||||| |||||||  ||||  ||||||| | ||| ||||||||  ||||||  |||||||||| |||||     
T  32474793 accgaagttgttactagattgagccacgaccaggtcgctctct--aagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 32474697  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| |||||||||||||||| |||  |||||||||    
T  32474696 gtctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattatacctctaaatatgg 32474608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 8887908 - 8888084
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||| ||  | ||||||||||||  ||||||  ||| |||||| |||||     
T  8887908 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgttgcactgtccaaaattg-tgcaagacagattatcaaccacgcc 8888006  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||| | ||||| |||||||||| ||||||| | || | |||| || |||||||||||||||||    
T  8888007 gcctccaggataaaacaaatccagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacacc 8888084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 23661505 - 23661392
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattac 195  Q
    ||||||| |||||||||| ||||| | |||||||||||||||||  ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||    
T  23661505 tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggttaactaatgcactgtagaaaaccgttcgagaattac 23661406  T
Q  196 acccttaaatatgg 209  Q
    ||||| ||||||||    
T  23661405 accctcaaatatgg 23661392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 23 - 207
Target Start/End: Original strand, 20520034 - 20520217
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| |||||  ||||||||||||  ||||||| | ||| |||| |||  ||||||| |||||||||| ||||| |     
T  20520034 cgaagttgttactaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcactgcccaagattg-tgcaagggagactatcaaccacgccgc 20520132  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatat 207  Q
    ||||| |||||||||||| |||||||||||||||| ||||||| || | | |||| ||  |||||||| ||||||| | ||||||    
T  20520133 ctccaagataaaacaagtccagctacaactgtgcggttaactactgtactgtagaaaactgttcgagatttacaccttcaaatat 20520217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 29350218 - 29350405
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| || || ||| |||||||||  ||||||| | ||| ||||||||  ||||||| |||| ||| | || ||     
T  29350218 accgaagttgttactaggttgagtcacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagaccatctaccatgcc 29350316  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||||||||||||||||| ||| ||||||||||| | |||| || |||| | |||| || ||||||||||||||||||| ||||||||    
T  29350317 gcctccaggataaaacaagctcaactacaactgtgtggttaattactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 29350405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 191
Target Start/End: Complemental strand, 28940296 - 28940107
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    ||||||||||||||||||||| ||||||||||||||| |||| ||||| | | || | ||| |||||||  || || | | || ||||||| |||| |||    
T  28940296 ttgaaaaagaattttcatccatcgaagttattattggattgaatcacgttgaagtcgttctttttaagatgttccgcggcactatccaaaa-ttatacaa 28940198  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaa 191  Q
    | ||||||||||| |||||  |||  | |||||||||| |||| |||||||| || ||||||||| |||||||||  ||||||||| ||||    
T  28940197 gatagactatcaaccacgccatctatatgataaaacaaattcaactacaactatgtgattaactactgcattataactaatcgttcaagaa 28940107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 12971746 - 12971572
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | |||||| |||||| |||||  ||||||||||||  ||||||| |  || ||||||||  ||||||  ||| |||||||||||| |     
T  12971746 cgaagttgttactaggttgactcacgaccaggtctctctctttaagacgtttcgtggcattgcccaaaattg-tgcaagacagattatcaatcacgccgc 12971648  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| |||||||||||||  || |||||||||| | |||||||| |||||| |||| || |||||||||||||||||    
T  12971647 ctctaggataaaacaagcccaactacaactgttcaattaactactgcattgtagaaaaccgttcgagaattacacc 12971572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 12965988 - 12965812
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | | ||||||||| | ||||| |||||||||||||  |||  || | ||| ||||||||  ||||||  |||||||||| |||||     
T  12965988 accgaagttgttactagattgagtcacaaccaggtcgctctctttaagacgttttatggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 12965890  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||| || |||||| ||| |||||||||| |||| | |||| ||  |||| |||||||||||    
T  12965889 gcctccaggataaaacaagtccaactacaattgttcgattaactaatgcactgtagaaaactgttcaagaattacacc 12965812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 106 - 198
Target Start/End: Complemental strand, 6596388 - 6596296
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||| ||||| | ||||||||||||||||| |||||||||| | || | ||||||| |||||| |||| || |||||||||||||||||    
T  6596388 actatcaaccacgccgcctccaggataaaacaagctcagctacaattatgtggttaactactgcattgtagaaaaccgttcgagaattacacc 6596296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 46964098 - 46964180
Alignment:
Q  127 aggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||  |||| ||||||| || | |||||||||||| |||||| || ||||||||| ||||||||| ||||||||    
T  46964098 aggataaaacaaactcagatacaactatgtggttaactattgcactatagaaaaccgttcgagatttacaccctcaaatatgg 46964180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 150
Target Start/End: Complemental strand, 12112756 - 12112628
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||| ||||||  |||| |||||||||||||  ||||||| | |||||| ||| || ||||||  |||||||||| ||| |     
T  12112756 accgaagttgttactaggttgaatcacgactaggtcgctctctttaagacgtttcgtggcactgtcc-aaagttgtgcaagacagactatcaaccacacc 12112658  T
Q  121 gtctccaggataaaacaagttcagctacaa 150  Q
    | ||||||||||||||||| ||| ||||||    
T  12112657 gcctccaggataaaacaagctcaactacaa 12112628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 26962049 - 26962154
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    |||| ||||||||||||||| ||| | |||||||||||||  ||||||| | ||   || || || |||||||||||||| ||| ||||| |||||||||    
T  26962049 attactgggttgagtcacgaccagatcgctctctttaagacgtttcgtggcacta--cacaagttgtgcaaggtagactaacaaacacgccgtctccagg 26962146  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  26962147 ataaaaca 26962154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 38437090 - 38436991
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    ||||||||||||||||||||  || |||||||||  ||||||| | || |||||   || || ||||||||||| ||| ||||| |||||||||||||||    
T  38437090 gggttgagtcacgatcaggtcactttctttaagacgtttcgtggcactatccaag--ttgtgaaaggtagactaacaaccacgccgtctccaggataaaa 38436993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 58 - 155
Target Start/End: Original strand, 16013724 - 16013821
Alignment:
Q  58 ctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtg 155  Q
    ||||||||||||  ||||||||| || || |||| || |||||| ||||||||| | ||||| | ||||||||||||| ||| ||| |||||| ||||    
T  16013724 ctctctttaagacgtttcgtgacactatctaaaaattgtgcaagatagactatccaccacgccgcctccaggataaaataagctcatctacaattgtg 16013821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 206
Target Start/End: Original strand, 55325846 - 55325938
Alignment:
Q  114 tcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataa-tcgttcgagaattacacccttaaata 206  Q
    |||||| | |||||||||||||||||  ||| |||||||||||| ||||||| |||| | |||| ||  || ||||||||||||||||||||||    
T  55325846 tcacgccgcctccaggataaaacaagcccagttacaactgtgcggttaacta-tgcactgtagaaaacccgatcgagaattacacccttaaata 55325938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 157
Target Start/End: Complemental strand, 17026204 - 17026085
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    |||| |||||||||||  | |||||||||||||  |||  |||| | || | |||||| ||||||  ||||||||||  ||| |||||  ||||||||||    
T  17026204 ggttaagtcacgatcaattcgctctctttaagacgttttctgacaccgt-ctaaatttgtgcaagacagactatcaacaacgttgtctttaggataaaac 17026106  T
Q  137 aagttcagctacaactgtgcg 157  Q
    |||||||||||||| ||||||    
T  17026105 aagttcagctacaattgtgcg 17026085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 37 - 157
Target Start/End: Original strand, 28125111 - 28125231
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggat--aaa 134  Q
    ||||||||||||| ||||||||||| ||||||| |||||||| | ||| |  ||| || ||||||  ||||||| || ||| ||| |||||||||  |||    
T  28125111 ggttgagtcacgaccaggttgctct-tttaagacatttcgtggcactg-cttaaaattgtgcaagacagactattaaccacactgcctccaggattaaaa 28125208  T
Q  135 acaagttcagctacaactgtgcg 157  Q
    ||||||||| |||||| ||||||    
T  28125209 acaagttcaactacaattgtgcg 28125231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 53119523 - 53119622
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    |||||||||||||||||||| |||||||||||||  ||||| |  ||  | |  || || |||||||||||||| ||| ||||| ||||| |||||||||    
T  53119523 gggttgagtcacgatcaggtcgctctctttaagacgtttcgcg--gcactactcaagttgtgcaaggtagactaacaaccacgccgtctctaggataaaa 53119620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 4117641 - 4117600
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| | |||||||||||||||||||||    
T  4117641 tgcaaggtagactagcaaccgcgctgtctccaggataaaaca 4117600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 13022081 - 13022122
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  13022081 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 13022122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 20507614 - 20507865
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    ||||||||||||||||||| || |||||||||| | |||| || || |  |||||  ||||||||| |   ||| ||| | |||  |||||||  |||||    
T  20507614 ttgaaaaagaattttcatctactgaagttattacttggtttaggcatggccaggtcactctctttacg---tttggtggcactgctcaaaattg-tgcaa 20507709  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccct 200  Q
    || |||||||||| ||| |   ||| |||||||||||||  || | | |  |||||||||||||| |||| | |||  || || | |||| ||||||||     
T  20507710 ggcagactatcaaccacaccacctctaggataaaacaagaccaacaatagttgtgcgattaactactgcactctagccaaccggttgagacttacacccg 20507809  T
Q  201 taaatatggctattaaagtcattcgaatttaacattgaaatcattttaatatggta 256  Q
     ||||||||||||||| |||| || ||||||| | ||||| || | ||||||||||    
T  20507810 caaatatggctattaaggtcactcaaatttaataatgaaaccactctaatatggta 20507865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 20810426 - 20810467
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  20810426 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 20810467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 25726792 - 25726727
Alignment:
Q  133 aaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||| ||| |||||||||||| ||||||| |||| | |||| || ||||||||| |||||||    
T  25726792 aaacaagtgcagttacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacacc 25726727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 2207757 - 2207677
Alignment:
Q  129 gataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||||||||||  || |||||| |||||| ||||||| || | | |||| || | ||||||||||||||||| ||||||||    
T  2207757 gataaaacaagcccatctacaattgtgcggttaactactgtactgtagaaaacccttcgagaattacaccctcaaatatgg 2207677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 27708856 - 27708928
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatt 93  Q
    ||||||||| ||| | ||||||||||||| ||||| | |||||||||||  ||||||| | ||| ||||||||    
T  27708856 accgaagttgttactaggttgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaatt 27708928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 86; Significance: 4e-41; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 4054 - 4230
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||||||||||| |||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  4054 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 4152  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  4153 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacc 4230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 96 - 209
Target Start/End: Complemental strand, 443985 - 443874
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattac 195  Q
    ||||||| |||||||||| ||||| ||||| |||||||||||||  |||||||||||||||| ||||||| |||| |||||| || ||||||||||||||    
T  443985 tgcaaggcagactatcaaccacgccgtctc-aggataaaacaagcccagctacaactgtgcggttaacta-tgcactatagaaaaccgttcgagaattac 443888  T
Q  196 acccttaaatatgg 209  Q
    ||||| ||||||||    
T  443887 accctcaaatatgg 443874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 85; Significance: 1e-40; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 12103005 - 12103192
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||||| |||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  12103005 accgaagttgttactaggttgagttacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 12103103  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  || |||||| |||||||||||||| |||| | |||| |||||||||||||||||||||||||||||||    
T  12103104 gcctccaggataaaacaagcccaactacaaatgtgcgattaactactgcactgtagaaaatcgttcgagaattacacccttaaatatgg 12103192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 7451738 - 7451914
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||||||||||||  ||||||| |||||||||| ||||||    
T  7451738 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaaattg-tgcaaggcagactatcaaccacgct 7451836  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||| |||||||||| ||||||| | || | |||| || |||||||||||||||||    
T  7451837 gcctccaggataaaacaagctcagctgcaactgtgcggttaactactacactgtagaaaaccgttcgagaattacacc 7451914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 26667252 - 26667428
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  26667252 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 26667350  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||| ||||| ||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  26667351 gcctccaggataaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattacacc 26667428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 26938849 - 26939025
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  26938849 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 26938947  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||| ||||| ||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  26938948 gcctccaggataaaacaagtccagctgcaactgttcgattaactactgcactctagaaaatcgttcgagaattacacc 26939025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 556675 - 556851
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||| ||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  556675 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 556773  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  556774 gcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 556851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 561447 - 561623
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||| ||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  561447 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 561545  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  561546 gcctccaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 561623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 29168088 - 29167912
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  29168088 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 29167990  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  || |||||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  29167989 gcctccaggataaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacc 29167912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 36937626 - 36937450
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||||| ||||||||||||| ||||| |||||||||||||  |||| || | ||| ||||||||  ||||||| |||||||||| |||||     
T  36937626 accgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 36937528  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  36937527 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 36937450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 41587275 - 41587090
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | | ||||||||||| |||||||||||||||||||  ||||||||| |||| |||||||  ||||||  |||||||||| |||||     
T  41587275 accgaagttgttactagtttgagtcacgaccaggttgctctctttaagacgtttcgtgacactgttcaaaattg-tgcaagacagactatcaaccacgcc 41587177  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||||||||||||||||| ||||||||||||||||| ||||||| |||| | |||| || |||||  |||||||||||| ||||||||    
T  41587176 gcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttc--gaattacaccctcaaatatgg 41587090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 6155518 - 6155358
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||||||||| |||||||||||||  ||||||| | ||||||||||||| | ||||  |||||||||| ||| | | ||||||||||||||    
T  6155518 ggttgagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaattt-tacaagacagactatcaaccacaccgcctccaggataaaac 6155420  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||  ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  6155419 aagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 6155358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 36942380 - 36942204
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| ||||||||  ||||||| |||||||||| |||||     
T  36942380 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 36942282  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  36942281 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 36942204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 51 - 209
Target Start/End: Complemental strand, 35679960 - 35679804
Alignment:
Q  51 caggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaa 150  Q
    ||||| |||||||||||||  ||||||| | ||||| ||||||  ||||||| |||||||||| ||||| | ||||||||||||||||| ||| ||||||    
T  35679960 caggtcgctctctttaagacgtttcgtggcactgtcaaaaattg-tgcaaggcagactatcaaccacgccgcctccaggataaaacaagctcaactacaa 35679862  T
Q  151 ctgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||  ||||||| |||||| |||| |||||||||||||||||||||| ||||||||    
T  35679861 ctgtgcagttaacta-tgcattgtagaaaatcgttcgagaattacaccctcaaatatgg 35679804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 6514700 - 6514529
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| || ||  ||||||||||||  ||||||| | ||| ||||||||| ||||||| |||||||||| ||||| | ||||||||||||||    
T  6514700 ggttgagtcacgaccaagtcactctctttaagacgtttcgtggcactgcccaaaattt-tgcaaggcagactatcaaccacgccgcctccaggataaaac 6514602  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||| | ||||||||||||| | ||||||| |||||| |||| |||| ||||||| ||||||| | ||||||||    
T  6514601 aagcttagctacaactgtgtggttaactactgcattgtagaaaatcattcgagatttacaccttcaaatatgg 6514529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 32461647 - 32461488
Alignment:
Q  38 gttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||| ||||| |||||||||||||  ||| ||| | ||| ||||||||  ||||||  |||||||||| ||||| | |||||||||||||||    
T  32461647 gttgagtcacgaccaggtcgctctctttaagacgttttgtggcactgcccaaaattg-tgcaagacagactatcaaccacgccgcctccaggataaaaca 32461549  T
Q  138 agttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||| |||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  32461548 agttcagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 32461488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 37248910 - 37248724
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||||||||||| |||||||| | ||  | ||||||  ||||||| |||||||||| |||||     
T  37248910 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacatttcgtggcactacctaaaattg-tgcaaggcagactatcaaccacgcc 37248812  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||||| |||||||||| |||| || || | |||||| || ||||||||||||||||||| ||||||||    
T  37248811 gcctccaggataaaacaagcccagctgcaactgtgcggttaa-tactgtactatagaaaaccgttcgagaattacaccctcaaatatgg 37248724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 36428691 - 36428865
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||| | |   ||| ||||||||  ||||||| |||||||||| ||||| |     
T  36428691 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttttgcggaactgcccaaaattg-tgcaaggcagactatcaaccacgccgc 36428789  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| ||||| ||||||||||||||    
T  36428790 ctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaatcgctcgagaattacacc 36428865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 39518392 - 39518566
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | | | ||||||||  |||| || |||||||||| ||||| |     
T  39518392 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattg-tgcatggcagactatcaaccacgccgc 39518490  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||| | |||| || ||||| |||||||||||    
T  39518491 ctccaggataaaacaagtccagctgcaactgtgcggttaactactgcagtgtagaaaaccgttcaagaattacacc 39518566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 39523031 - 39523205
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | | | ||||||||  ||||||  |||||||||| ||||| |     
T  39523031 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaccgcccaaaattg-tgcaagacagactatcaaccacgccgc 39523129  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||| | |||| || ||||| |||||||||||    
T  39523130 ctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacacc 39523205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 40 - 198
Target Start/End: Complemental strand, 12042028 - 12041871
Alignment:
Q  40 tgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaag 139  Q
    |||||||||| ||||| | |||||||||||  ||||||| | ||| |||||| | |||||||| | |||||||| ||||| | |||||||||||||||||    
T  12042028 tgagtcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaaat-atgcaaggcaaactatcaaccacgccgcctccaggataaaacaag 12041930  T
Q  140 ttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||| |||||||||| |||| |||| | ||  ||||||||||||||||    
T  12041929 tccagctacaactgttcgattaactactgcactataaaaaactgttcgagaattacacc 12041871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 24 - 198
Target Start/End: Complemental strand, 12502011 - 12501838
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | |||||||||| || ||||| |||||||||||||  ||||||| | ||| ||||||||  |||||   |||||||||| ||||| | |    
T  12502011 gaagttgttactaggttgagtcatgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaaacagactatcaaccacgccgcc 12501913  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||||||  ||||||||||||| || ||||||| |||| | |||| ||||||||||||||||||||    
T  12501912 tccaggataaaacaagcccagctacaactgttcggttaactactgcactgtagaaaatcgttcgagaattacacc 12501838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 36423617 - 36423793
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||| ||| ||||| |||||||||||||  ||||| | | ||| ||||||||  ||||||| |||||||||| |||||     
T  36423617 accgaagttgttactaggttgagtcgcgaccaggtcgctctctttaagacgtttcgcggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 36423715  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||| ||||||||||  ||||||| |||||  ||||||||| |||| | |||| ||||||||||||||||||||    
T  36423716 gcctccagaataaaacaagcccagctactactgtttgattaactaatgcactgtagaaaatcgttcgagaattacacc 36423793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 40147877 - 40148051
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||||| |||||||||| |||||||| |||||||||||||  ||||||| | ||| |||||| || ||||||  |||||||||| ||||| |     
T  40147877 cgaagttgttattaggttgagtcatgatcaggtcgctctctttaagatgtttcgtggcactgcccaaaa-ttgtgcaagacagactatcaaccacgccgc 40147975  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||| ||| |||||| ||| ||| | |||||||| | || | |||| || |||||||||||||||||    
T  40147976 ctccaggataaaataagctcagcttcaattgttcaattaactactacactgtagaaaaccgttcgagaattacacc 40148051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 21 - 139
Target Start/End: Complemental strand, 37652945 - 37652828
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||||| ||||||||||||||||||| |||||||||||||  |||||||||  ||||||||| || ||||||| |||||||||| |||||     
T  37652945 accgaagttgttattaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacattgtccaaaa-ttgtgcaaggcagactatcaaccacgcc 37652847  T
Q  121 gtctccaggataaaacaag 139  Q
      |||||||||||||||||    
T  37652846 acctccaggataaaacaag 37652828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 3665912 - 3666088
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||||||||||  |||| |||||||| ||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  3665912 accgaagttgttactaggttgagtcacgactaggtcgctctcttcaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 3666010  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
      ||| |||||||||||||| || ||||||||||||| ||||||| |||| | |||| || |||||| ||||||||||    
T  3666011 acctctaggataaaacaagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgggaattacacc 3666088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 12045254 - 12045078
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| || ||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||| | |||||     
T  12045254 accgaagttgttactaggttgagtcacgaccaggtcgccctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcgaccacgcc 12045156  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||   ||||||||||||||| ||||||| |||| | ||||  | |||||||||||||||||    
T  12045155 gcctccaggataaaacaagcatagctacaactgtgcggttaactactgcactgtagactaccgttcgagaattacacc 12045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 41996645 - 41996816
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| |||||||||||||||||||  ||||||| | ||| |||||| || || |||  |||||||||| |||||     
T  41996645 accgaagttgttactaggttgagtcacgaccaggttgctctctttaagacgtttcgtggcactgcccaaaa-ttgtgtaagacagactatcaaccacgcc 41996743  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  || ||||||||||||| ||||||| ||     |||| || |||||||||||||||||    
T  41996744 gcctccaggataaaacaagcccaactacaactgtgcggttaactactg-----tagaaaaccgttcgagaattacacc 41996816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 42001414 - 42001585
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  || |||  |||||||||| |||||     
T  42001414 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgtaagacagactatcaaccacgcc 42001512  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  |||||||||||||||| ||||||| ||     |||| || |||||||||||||||||    
T  42001513 gcctccaggataaaacaagcccagctacaactgtgcggttaactactg-----tagaaaaccgttcgagaattacacc 42001585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 31 - 208
Target Start/End: Complemental strand, 20181168 - 20180992
Alignment:
Q  31 ttattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagga 130  Q
    ||||| ||||||||||||| |||||  ||||||||||||  ||||||| |  ||||||||||| |||||||  ||||||| || |||||   ||||| ||    
T  20181168 ttattaggttgagtcacgaccaggtcactctctttaagacgtttcgtggcattgtccaaaatt-atgcaagacagactattaaccacgccacctccatga 20181070  T
Q  131 taaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatg 208  Q
    ||||||||| ||| |||||| |||||| ||||||| |||| | |||| ||  |||||||| ||||||||| |||||||    
T  20181069 taaaacaagctcaactacaattgtgcggttaactactgcactgtagaaaactgttcgagatttacaccctcaaatatg 20180992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 10759934 - 10759749
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||| |||||||  ||| ||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  10759934 accgaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgttttgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 10759837  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  ||  |||||||||||| ||||||| ||||   |||| || ||||||||||||| ||||| ||||||||    
T  10759836 gcctccaggataaaacaagcccatttacaactgtgcggttaacta-tgcacggtagaaaaccgttcgagaattataccctcaaatatgg 10759749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 12102951 - 12102803
Alignment:
Q  16 catccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatc 115  Q
    |||| ||||||||| ||| | |||||||||||||  |||| |||||||||||||  ||| ||| | ||| ||||||||  ||||||| |||||||||| |    
T  12102951 catctaccgaagttgttactaggttgagtcacgactaggtcgctctctttaagactttttgtggcactggccaaaattg-tgcaaggaagactatcaacc 12102853  T
Q  116 acgctgtctccaggataaaacaagttcagctacaactgtgcgattaacta 165  Q
    || | ||| |||||||||||||||  || ||||||||||||| |||||||    
T  12102852 acaccgtcaccaggataaaacaagaccaactacaactgtgcggttaacta 12102803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 109 - 198
Target Start/End: Complemental strand, 11981308 - 11981219
Alignment:
Q  109 atcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||| ||||| | |||||| ||||||||||  || |||||||||| ||||||||||||||| | |||| || |||||||||||||||||    
T  11981308 atcaaccacgccgcctccagaataaaacaagcacatctacaactgttcgattaactattgcactgtagaaaaccgttcgagaattacacc 11981219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 197
Target Start/End: Complemental strand, 16116348 - 16116189
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    |||| ||||||||  ||||||||||| |||| |  ||||||||| ||| ||||||||  ||||||  | |||||||| |||||   ||||  ||||||||    
T  16116348 ggttaagtcacgactaggttgctctccttaaaacgtttcgtgacactgcccaaaattg-tgcaagacaaactatcaaccacgccacctcctagataaaac 16116250  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    ||||||| ||||||| || |  ||||||| |||| |||||| || ||||||||||||||||    
T  16116249 aagttcaactacaacagtactgttaactactgcactatagaaaaccgttcgagaattacac 16116189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 24435964 - 24435869
Alignment:
Q  40 tgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||| ||||| |||||||||||||  ||||| | | || |||||   || |||||||||||||||||| ||||| |||||||||||||||||    
T  24435964 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactatccaag--ttgtgcaaggtagactatcaaccacgccgtctccaggataaaaca 24435869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 196
Target Start/End: Original strand, 15468490 - 15468673
Alignment:
Q  12 ttttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatc 111  Q
    |||||||||| |||||||||||||| ||||||||| ||||| ||   ||||||||| |  ||||| | |  |||| |||| |||||||||  | ||||||    
T  15468490 ttttcatccatcgaagttattattgagttgagtcatgatcaagtcattctctttaatatgtttcgaggcaatgtctaaaa-ttatgcaagacatactatc 15468588  T
Q  112 aatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattaca 196  Q
    ||  | | |||||||| ||||||||||  |||| |||||  |||||||||| | ||| | | | | |||||||||||||||||||    
T  15468589 aactatgttgtctccaagataaaacaaactcagttacaatagtgcgattaattgttgtacttttgctaatcgttcgagaattaca 15468673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 137
Target Start/End: Complemental strand, 13582785 - 13582690
Alignment:
Q  40 tgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||| ||||| |||||||||||||  ||||| | | ||  ||||  ||| |||||||||||||| ||| ||||| |||||||||||||||||    
T  13582785 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa--tttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 13582690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 4871988 - 4872074
Alignment:
Q  108 tatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaatta 194  Q
    |||||| ||||| | ||||| ||||||||||| ||| |||||||||| |||||||||| || | | |||| || |||| ||||||||    
T  4871988 tatcaaccacgccgcctccatgataaaacaagctcaactacaactgttcgattaactactgtactgtagaaaaccgtttgagaatta 4872074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 36 - 137
Target Start/End: Original strand, 7805067 - 7805166
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    |||||||||||||| |||||  ||||||||||||  ||||| | | ||  ||||   || |||||||||||||| ||| ||||| |||||||||||||||    
T  7805067 gggttgagtcacgaccaggtccctctctttaagacgtttcgcggcactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 7805164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15148538 - 15148586
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacga 49  Q
    ||||||| ||||||||||  ||| ||||||||||||||||||| |||||    
T  15148538 ttgaaaatgaattttcatttaccaaagttattattgggttgagacacga 15148586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 21 - 207
Target Start/End: Original strand, 7084 - 7269
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  7084 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 7182  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatat 207  Q
    | ||||||||||||||||| ||||||||||||||||| ||||||| |||| | |||| || |||||||||||||| |||| ||||||    
T  7183 gcctccaggataaaacaagctcagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacgccctcaaatat 7269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 83; Significance: 2e-39; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 37264677 - 37264492
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| |||||||| |||||||| |||||||||| ||||| |     
T  37264677 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaatt-atgcaaggcagactatcaaccacgccgc 37264579  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||||||||||||||||  ||||||||| |||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  37264578 ctccaggataaaacaagcccagctacaattgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 37264492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 31269014 - 31269201
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| | ||||||  ||||||| |||||||||| |||||     
T  31269014 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcctaaaattg-tgcaaggcagactatcaaccacgcc 31269112  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||| |||||||||| ||| | ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  31269113 gcctccaggataaaacaagtccagctacaaccgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 31269201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 31273501 - 31273688
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| |||||     
T  31273501 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 31273599  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  |||||||||||||| | ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  31273600 gcctccaggataaaacaagcccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 31273688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 5271534 - 5271358
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| |||||     
T  5271534 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 5271436  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||| || ||||||||||  |||| ||||||||| | |||| ||||||||||||||||||||    
T  5271435 gcctccaggataaaacaagtccaactacaactgtttgattcactattgcactgtagaaaatcgttcgagaattacacc 5271358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 37259992 - 37259805
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||| |||||||||  ||||||| | ||   |||||||  ||||||| |||||||||| |||||     
T  37259992 accgaagttgttactaggttgagtcacgaccaggtcgctttctttaagacgtttcgtggcactactcaaaattg-tgcaaggcagactatcaaccacgcc 37259894  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||||||||||||||||  |||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  37259893 gcctccaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 37259805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 198
Target Start/End: Original strand, 8693693 - 8693867
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| ||||  ||||||||  ||||||  | |||||||| ||||| |     
T  8693693 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcgctacccaaaattg-tgcaagacatactatcaaccacgccgc 8693791  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| ||||||||||||| |||||||||||||| |||||||||| |||| | |||| ||||||||||||||||||||    
T  8693792 ctcaaggataaaacaagctcagctacaactgttcgattaactactgcactgtagaaaatcgttcgagaattacacc 8693867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 42 - 209
Target Start/End: Complemental strand, 31729481 - 31729315
Alignment:
Q  42 agtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagtt 141  Q
    ||||| |||||||| |||||||||||||  ||||||| | ||  ||||||||  ||||||| |||| ||||||||||| | ||||||||||||||||||     
T  31729481 agtcatgatcaggtcgctctctttaagacgtttcgtggcactacccaaaattg-tgcaaggcagacaatcaatcacgccgcctccaggataaaacaagtc 31729383  T
Q  142 cagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||| |||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  31729382 cagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 31729315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 218
Target Start/End: Complemental strand, 42758868 - 42758674
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| ||||  |     
T  42758868 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagatgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgtcgc 42758770  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatggctattaaag 218  Q
    |||||| ||||||| ||| ||   ||||||||||||||||||| |||| | |||| || ||||||||||||||||||| |||||||||||||||||    
T  42758769 ctccagaataaaactagtccaaaaacaactgtgcgattaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatggctattaaag 42758674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 5 - 208
Target Start/End: Original strand, 2819808 - 2820010
Alignment:
Q  5 aaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggta 104  Q
    |||| |||||| ||| | ||||||| ||| | | ||||||||||| ||||| | | |||||||||  |||||||   ||||||||||||  |||||||||    
T  2819808 aaaataatttttatctatcgaagttgttactagattgagtcacgaccaggtcgttttctttaagatgtttcgtggtactgtccaaaattg-tgcaaggta 2819906  T
Q  105 gactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaa 204  Q
    ||||||| | || || |  |||||||||||||||||| |||||||||| ||| ||||||| ||||| |||||| |||||||||||| ||||||||| |||    
T  2819907 gactatctaccatgccgcgtccaggataaaacaagtttagctacaactatgcaattaactgttgcactatagaaaatcgttcgagatttacaccctcaaa 2820006  T
Q  205 tatg 208  Q
    ||||    
T  2820007 tatg 2820010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 16421009 - 16421185
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||| |||||| |||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  16421009 accgaagttgttactaggttgagtcacgaccaggtcgctctcattaagacatttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 16421107  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | || ||||||||||||||  |||||||||||||||| ||||||| |||| | |||| || ||| ||||| |||||||    
T  16421108 gcctacaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgtccgagatttacacc 16421185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 51697897 - 51698083
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| | ||||| |||||||  |||| |||| |||  |||||||  ||||||| |||||||||| |||||     
T  51697897 accgaagttgttactaggttgagtcacgaccagatcgctctttttaagacgtttcatgacactgctcaaaattg-tgcaaggcagactatcaaccacgcc 51697995  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||||||||||||||||| ||| |||||| |||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  51697996 gcctccaggataaaacaagctcaactacaattgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 51698083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 33463469 - 33463295
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||||||||| ||  ||||||| ||| | |||| | ||| |     
T  33463469 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgtccaaagttg-tgcaaggcagattgtcaaccccgccgc 33463371  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||  || |||||||||| |||||||||| |||||| |||| || |||||||||||||||||    
T  33463370 ctccaggataaaacaagcacaactacaactgttcgattaactactgcattgtagaaaaccgttcgagaattacacc 33463295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 47244230 - 47244415
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||||||||| || ||||||||||  ||||||| | |||| |||||||  || |||  |||||||||| ||||| |     
T  47244230 cgaagttgttagtaggttgagtcacgatcaggtcgccctctttaagacgtttcgtggcactgttcaaaattattg-aagaaagactatcaaccacgccgc 47244328  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||||||||||||||||  || ||||||||||||| ||||||| |||| | |||| || ||||||||||||| ||||  ||||||||    
T  47244329 ctccaggataaaacaagcacaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattaaacccccaaatatgg 47244415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 8030591 - 8030415
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||| |||| ||||||| |||||||||||||  ||| ||| | ||| ||||||||  |||||| |||||||||||  |||||    
T  8030591 accgaagttgttactaggttgaatcacaatcaggtcgctctctttaagacgttttgtggcactgcccaaaattg-tgcaagatagactatcaacaacgct 8030493  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||| ||| |||||||||| |||| | |||| || ||||||| |||||||||    
T  8030492 gcctccaggataaaacaagcccagctacaaatgttcgattaactactgcactgtagaaaaccgttcgaaaattacacc 8030415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 24 - 155
Target Start/End: Original strand, 12878222 - 12878352
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | ||||||||||||||||||| |||||||||||||  ||||||||| || | |||||||  ||||| | ||||||||||||||||   |    
T  12878222 gaagttgttactaggttgagtcacgatcaggtcgctctctttaagacgtttcgtgacacttttcaaaattg-tgcaaagcagactatcaatcacgccacc 12878320  T
Q  124 tccaggataaaacaagttcagctacaactgtg 155  Q
    ||||| ||||||||||||||||||||||||||    
T  12878321 tccagaataaaacaagttcagctacaactgtg 12878352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 5928318 - 5928158
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||| |||||||||||||  ||| ||| | |||  |||||||  ||||||| |||||||||| ||| | | ||||||||||||||    
T  5928318 ggttgagtcacgaccaggtcgctctctttaagatgtttagtggcactgctcaaaattg-tgcaaggcagactatcaaccacaccgcctccaggataaaac 5928220  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||  ||||| ||||||| |||||||||| |||| | |||| |||||||| |||||||||||    
T  5928219 aagcccagctgcaactgttcgattaactactgcactgtagaaaatcgttcaagaattacacc 5928158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 47574605 - 47574781
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    |||||| || ||||| ||||||||||| ||||||| |||||||||||||  |||| |||| ||  ||||||||  ||||||  | | ||||||||||||     
T  47574605 accgaatttgttattaggttgagtcacaatcaggtcgctctctttaagacgtttcttgacactacccaaaattg-tgcaagacaaaatatcaatcacgcc 47574703  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |  ||||||||||||||||| |||||||||||||||| ||||||| |||  | |||| ||  ||||||||||||||||    
T  47574704 gcatccaggataaaacaagtccagctacaactgtgcggttaactactgccatgtagaaaactgttcgagaattacacc 47574781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 12874522 - 12874662
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||||| ||||||||||| ||||| | ||||||||||||| | |||||| | ||||| ||||||  ||||| | |||| ||||||||||| | |    
T  12874522 gaagttgttattaggttgagtcacaatcagatcgctctctttaagacaattcgtggcactgtctaaaattg-tgcaaagcagaccatcaatcacgccgcc 12874620  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaacta 165  Q
    |||||||||||||||| ||||||| || |||||| |||||||    
T  12874621 tccaggataaaacaagctcagctaaaattgtgcggttaacta 12874662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 197
Target Start/End: Complemental strand, 13522107 - 13521929
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| |||||| || ||||||  |||||||||| |||||     
T  13522107 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaa-ttgtgcaagacagactatcaaccacgcc 13522009  T
Q  121 gtctccaggataaaacaagttca---gctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    | |||||||||||||||||| ||   ||| ||||||| || || |||| |||| | |||| || ||||||||||||||||    
T  13522008 gcctccaggataaaacaagtccagctgctgcaactgtacggttgactactgcactgtagaaaaccgttcgagaattacac 13521929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 19102039 - 19102144
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaa 203  Q
    |||||||||| ||||  | |||||||||||||||||| || ||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||    
T  19102039 agactatcaaccacgtcgcctccaggataaaacaagtccaactacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaa 19102138  T
Q  204 atatgg 209  Q
    ||||||    
T  19102139 atatgg 19102144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 31765866 - 31765998
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||| | |||||  ||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  31765866 accgaagttgttactaggttgagtcacaaccaggtcactctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 31765964  T
Q  121 gtctccaggataaaacaagttcagctacaactgt 154  Q
    | |||||||||||||||||| |||||||||||||    
T  31765965 gcctccaggataaaacaagtccagctacaactgt 31765998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 48276743 - 48276588
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    |||||| |||||||||||| |||||||||||||  ||| ||  | |||| |||||||  |||||     |||||||| ||||| | ||||||||||||||    
T  48276743 ggttgaatcacgatcaggtcgctctctttaagacgttttgttgcactgttcaaaattg-tgcaa-----actatcaaccacgccgcctccaggataaaac 48276650  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||| |||||||||| |||| | |||| || | |||||||||||||||    
T  48276649 aagttcagctacaactgttcgattaactactgcactgtagaaaaccattcgagaattacacc 48276588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 24 - 209
Target Start/End: Original strand, 55251703 - 55251886
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | ||||||||||||| ||||| ||||| |||||||  ||||||| | ||||||||||||  ||||||  |||||||||| |||||   |    
T  55251703 gaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgtccaaaattg-tgcaagacagactatcaaccacgccacc 55251800  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||  || |||||||||| || ||||||| |||| | |||| || ||||||||| ||||||| || |||||||    
T  55251801 tccaggataaaacaagcccaactacaactgtacggttaactactgcactgtagaaaaccgttcgagatttacacctttgaatatgg 55251886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 19541260 - 19541100
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||||||| | | ||| ||||||| |||||||| |  |||  ||||||  | ||||  |||||||||| ||||| | ||  ||||||||||    
T  19541260 ggttgagtcacgatcagatcgttctttttaagatatttcgtggcattgtttaaaattg-tacaagacagactatcaaccacgccgcctataggataaaac 19541162  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||| |||||||||| || |||||||||| |||||| |||| || |||||||||||||||||    
T  19541161 aagtccagctacaacagttcgattaactactgcattgtagaaaaccgttcgagaattacacc 19541100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 154
Target Start/End: Original strand, 19906231 - 19906363
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||||||||| ||||||||||||||||||| ||||| |||||||  ||  ||||| ||||| |||| || ||||||  ||||||||||   |||     
T  19906231 accgaagttattattaggttgagtcacgatcaggtcgctctttttaagacgttcagtgacactgtctaaaa-ttgtgcaagacagactatcaactccgcc 19906329  T
Q  121 gtctccaggataaaacaagttcagctacaactgt 154  Q
    | ||||||||||||||||| ||| ||||||||||    
T  19906330 gcctccaggataaaacaagctcaactacaactgt 19906363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 32082205 - 32082030
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| |  |||| ||||||| ||||| || | ||||||||||||  ||||||| | |||||||| |||||     
T  32082205 accgaagttgttactaggttgagtcacgaccagatcactctttttaagacatttcatggcactgtccaaaattg-tgcaaggca-actatcaaccacgcc 32082108  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||| ||||| |||||| ||||||| |||| | |||| || | ||||||| |||||||    
T  32082107 gcctccaggataaaacaagctcagttacaattgtgcggttaactactgcagtgtagaaaaccattcgagatttacacc 32082030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 13059390 - 13059576
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||||||| | |||||||||| || ||| | |||||||||||||  ||||||| | |||   ||||||  ||||||  |||||||||| ||| |     
T  13059390 accgaagttattactaggttgagtcatgaccagatcgctctctttaagacgtttcgtggcactgcataaaattg-tgcaagacagactatcaaccactcc 13059488  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||| || |||||||||| ||||||||||||||| | ||||||| |||||| |||| || |||||||| |||||||| | ||||||||    
T  13059489 gcctctagaataaaacaagctcagctacaactgtgtggttaactactgcattgtagaaaaccgttcgag-attacaccttcaaatatgg 13059576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 21 - 140
Target Start/End: Complemental strand, 12824010 - 12823892
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||||| |||||||||| || ||||| ||||||||||||| |||||||| | ||| |||||| || ||||||  | |||||||| |||||     
T  12824010 accgaagttgttattaggttgagtcatgaccaggtcgctctctttaagacatttcgtggcactgcccaaaa-ttgtgcaagacaaactatcaaccacgcc 12823912  T
Q  121 gtctccaggataaaacaagt 140  Q
    | ||||||||||||||||||    
T  12823911 gcctccaggataaaacaagt 12823892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 9362393 - 9362505
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaa 203  Q
    |||||||||||||  ||  ||| ||||||||| |||| |||||| ||||||||||||||||| |||| ||||| ||| | ||| ||| ||||||  ||||    
T  9362393 agactatcaatcaaactaactctaggataaaataagtccagctaaaactgtgcgattaactactgcactatagctaaccattcaagacttacacatttaa 9362492  T
Q  204 atatggctattaa 216  Q
    |||||||||||||    
T  9362493 atatggctattaa 9362505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 196
Target Start/End: Original strand, 32545054 - 32545249
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatg-ca 99  Q
    ||||||| ||||||| ||| || |||||| ||| | |||||||||||||||||||   ||| |||||||  ||||||| | | | | |||| || || ||    
T  32545054 ttgaaaatgaatttttatctactgaagttgttactaggttgagtcacgatcaggtcaatct-tttaagatgtttcgtggcaccgcctaaaaattgtgtca 32545152  T
Q  100 aggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattaca 196  Q
    ||  |||||||||| |||| ||| |||| ||||||||||| ||| |||||| ||||||| |||||| |||| | ||  |||||||||||||||||||    
T  32545153 agacagactatcaaccacgttgtatccatgataaaacaagctcaactacaattgtgcgactaactactgcactgtaattaatcgttcgagaattaca 32545249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 16948063 - 16948168
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaa 203  Q
    ||||||||||  |||| | |||||||||||||||||||||   ||||||||||||||||||| | || | ||| ||||| ||| |||||||||||||  |    
T  16948063 agactatcaactacgccgcctccaggataaaacaagttcattgacaactgtgcgattaactactacactgtagctaatcattctagaattacaccctcga 16948162  T
Q  204 atatgg 209  Q
    ||||||    
T  16948163 atatgg 16948168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 135
Target Start/End: Complemental strand, 10120907 - 10120811
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    ||||||||||||||||||| |||||||||||||  ||||| | | ||  ||  || || |||||||||||||| ||| ||||| |||||||||||||||    
T  10120907 ggttgagtcacgatcaggtcgctctctttaagacgtttcgcggcactaccc--aagttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 10120811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 40 - 137
Target Start/End: Original strand, 653043 - 653138
Alignment:
Q  40 tgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||| ||||| |||||||||||||  ||||| | | ||  ||||  ||| |||||||||||||| ||| ||||| |||||||||||||||||    
T  653043 tgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaa--tttgtgcaaggtagactaacaaccacgccgtctccaggataaaaca 653138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 24 - 170
Target Start/End: Complemental strand, 33469085 - 33468940
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | |||||||||||||  |||| | |||||||||||  ||| ||| | ||| ||||| ||  ||||||| ||||| |||| |||||   |    
T  33469085 gaagttgttactaggttgagtcacgactaggtcgttctctttaagacgttttgtggcactgcccaaagttg-tgcaaggcagactgtcaaccacgccacc 33468987  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    |||| ||||||||||| |||||||||| ||| |||||||||| ||||    
T  33468986 tccatgataaaacaagctcagctacaattgttcgattaactactgca 33468940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 178 - 265
Target Start/End: Original strand, 16954437 - 16954525
Alignment:
Q  178 taatcgttcgagaattacacccttaaatatggc-tattaaagtcattcgaatttaacattgaaatcattttaatatggtaccgtgacca 265  Q
    ||||| || |||||||||||||| ||||||||| |||| ||| || || ||||||| |||||||  | | |||||||||||||||||||    
T  16954437 taatcatttgagaattacaccctcaaatatggcttattgaagccactcaaatttaatattgaaacaactataatatggtaccgtgacca 16954525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 52691190 - 52691098
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatt 93  Q
    ||||||| ||||||||||||| | || |||| | | ||||||||||||||||  | |||||||||||||  ||| ||||| ||| ||||||||    
T  52691190 ttgaaaatgaattttcatccatcaaaattataactaggttgagtcacgatcatatcgctctctttaagacgttttgtgactctgcccaaaatt 52691098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 40840417 - 40840483
Alignment:
Q  131 taaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||| || | ||||||||||||||||||| | |||| || ||| ||||||||||||||||||||    
T  40840417 taaaacaaatttaactacaactgtgcgattaaccactgcacta-agaaaatcgttcgagaattacacc 40840483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 104 - 209
Target Start/End: Original strand, 4551059 - 4551164
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaa 203  Q
    ||||||||||  |||| | ||||||||||||||||  |||  ||||||| |||||||||||| |||| | |||| || ||||  ||| ||||||| | ||    
T  4551059 agactatcaactacgccgcctccaggataaaacaaactcaattacaactctgcgattaactactgcactgtagaaaaccgtttaagatttacaccatcaa 4551158  T
Q  204 atatgg 209  Q
    ||||||    
T  4551159 atatgg 4551164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 41816780 - 41816813
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaaga 69  Q
    |||||||||||||||||||||||| |||||||||    
T  41816780 gggttgagtcacgatcaggttgctttctttaaga 41816813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 82; Significance: 9e-39; HSPs: 39)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 4 - 209
Target Start/End: Original strand, 19166597 - 19166801
Alignment:
Q  4 aaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggt 103  Q
    ||||| |||||| ||| ||||||||| ||| | ||||||||||||| || || |||||||||||||  ||||||| | ||| ||||||||  |||| ||     
T  19166597 aaaaataatttttatctaccgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcacggc 19166695  T
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaa 203  Q
    |||||||||| ||||| | ||||||||||||||||| ||| ||||||||||||  ||||||| |||| |||||| || ||||||||||||||||||| ||    
T  19166696 agactatcaaccacgccgcctccaggataaaacaagctcaactacaactgtgctgttaactactgcactatagaaaaccgttcgagaattacaccctcaa 19166795  T
Q  204 atatgg 209  Q
    ||||||    
T  19166796 atatgg 19166801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 37 - 209
Target Start/End: Original strand, 36683575 - 36683746
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    |||||||||| ||  |||| |||||||||||||  ||||||| | ||| ||||||||  || |||| |||||||||| ||||||| ||||||||||||||    
T  36683575 ggttgagtcatgactaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgtaaggcagactatcaaccacgctgcctccaggataaaac 36683673  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||| ||||||||| ||||||||||||||| |||| | |||| ||||||| |||||||||||||| ||||||||    
T  36683674 aaggtcagctacatctgtgcgattaactactgcactgtagaaaatcgtttgagaattacaccctcaaatatgg 36683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 15875803 - 15875589
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    |||||||  |||||||||| | ||||||| ||| |   |||||| |||| ||||| |||||||||| ||  ||||||| | ||| ||||||||  |||||    
T  15875803 ttgaaaagtaattttcatctatcgaagttgttactaaattgagttacgaccaggtcgctctctttaggacgtttcgtggcactgcccaaaattg-tgcaa 15875705  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccct 200  Q
    || |||||||||| ||||| | ||||||||||||||||| |||||||||| ||| |||||||||| |||| |||||| || ||||| |||||||||| ||    
T  15875704 ggcagactatcaaccacgccgcctccaggataaaacaagctcagctacaattgtacgattaactactgcactatagaaaaccgttcaagaattacactct 15875605  T
Q  201 taaatatggctattaa 216  Q
     |||||||||||||||    
T  15875604 caaatatggctattaa 15875589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 216
Target Start/End: Complemental strand, 17954008 - 17953793
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    ||||||||  ||||||||| ||||||||| ||| | |||||||| |||| || || ||| |||||||||  ||||||| | ||| ||||||||  |||||    
T  17954008 ttgaaaaatgattttcatctaccgaagttgttactaggttgagtaacgaccatgtcgctttctttaagacgtttcgtggcactgcccaaaattg-tgcaa 17953910  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaa-ctgtgcgattaactattgcattatagataatcgttcgagaattacaccc 199  Q
    |  ||| |||||| ||||| | ||||| ||||||||||| ||| |||||| ||||| ||||||||| |||| | |||| |||||||||||||||||||||    
T  17953909 gacagaatatcaaccacgccgcctccaagataaaacaagctcacctacaaactgtgtgattaactactgcactgtagaaaatcgttcgagaattacaccc 17953810  T
Q  200 ttaaatatggctattaa 216  Q
    | |||||||||||||||    
T  17953809 tcaaatatggctattaa 17953793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 44926038 - 44925852
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||||||||| |  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  44926038 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 44925940  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||||||||||||||||| ||| |||||||| |||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  44925939 gcctccaggataaaacaaggtcatctacaactatgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaatatgg 44925852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 198
Target Start/End: Complemental strand, 31449979 - 31449805
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| ||||| |     
T  31449979 cgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgccgc 31449881  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||| ||||| |||||||||| ||||||| |||| | |||| || |||||||||||||||||    
T  31449880 ctccaggataaaacaagtccagctgcaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacacc 31449805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 209
Target Start/End: Original strand, 1807452 - 1807640
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||||||||||  |||| |||||||||||||  ||||||||| ||| ||||||||  ||||||| |||||||||| |||||     
T  1807452 accgaagttgttactaggttgagtcacgactaggtcgctctctttaagacgtttcgtgacactgcccaaaattg-tgcaaggcagactatcaaccacgcc 1807550  T
Q  121 gtctccaggataaaa-caagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||| ||||||||| ||||| |||||||||||||||| ||||||| |||| | |||| || ||||||||| ||||||| | ||||||||    
T  1807551 gcctctaggataaaaacaagtccagctacaactgtgcggttaactagtgcactgtagaaaaccgttcgagatttacaccttcaaatatgg 1807640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 17025915 - 17026091
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| |||| |||  ||||||  |||||||||||||||      
T  17025915 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattg-tgcaagacagactatcaatcacgtc 17026013  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||||  |||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  17026014 gcctccaggataaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 17026091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 17556407 - 17556583
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| |||| |||  ||||||  |||||||||||||||      
T  17556407 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaacattg-tgcaagacagactatcaatcacgtc 17556505  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||||  |||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  17556506 gcctccaggataaaacaagtctagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 17556583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 22 - 198
Target Start/End: Complemental strand, 40125999 - 40125824
Alignment:
Q  22 ccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctg 121  Q
    |||||||| ||| | ||||||||||||| ||| | |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| ||||| |    
T  40125999 ccgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgccg 40125901  T
Q  122 tctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
     ||||| |||||||||||  ||||||||||||| |||||||||| ||||   |||| ||||||||||||||||||||    
T  40125900 cctccaagataaaacaagcccagctacaactgttcgattaactactgcaccgtagaaaatcgttcgagaattacacc 40125824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 18876481 - 18876296
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||| |||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| |||||     
T  18876481 accgaagttgttactaggttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 18876384  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatg 208  Q
    | ||||||||||||||||  ||| ||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| |||||||    
T  18876383 gcctccaggataaaacaaactcatctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcaaatatg 18876296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 21 - 206
Target Start/End: Original strand, 33416527 - 33416710
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| | |||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| |||||     
T  33416527 accgaagttgttactaggttgagtcacgaccaggtcggtctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgcc 33416625  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaata 206  Q
    | ||||| |||||||||||  |||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| |||||    
T  33416626 gcctccaagataaaacaagcccagctacaactgtgcggttaacta-tgcactgtagaaaaccgttcgagaattacaccctcaaata 33416710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 21 - 208
Target Start/End: Complemental strand, 23548747 - 23548561
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| | ||| ||||||| |||||  ||||||| | ||||  ||||||  |||||||  ||||||||| ||||      
T  23548747 accgaagttgttactaggttgagtcacgacctggtcgctctctataagacgtttcgtggcactgtgtaaaattg-tgcaaggcggactatcaaccacgtc 23548649  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatg 208  Q
    | ||| ||||||||||||||||||||||||||| ||| ||||||| |||||| |||| || ||||| ||| || ||||||||||||||    
T  23548648 gcctctaggataaaacaagttcagctacaactgcgcggttaactactgcattgtagaaaaccgttcaagattttcacccttaaatatg 23548561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 23 - 197
Target Start/End: Complemental strand, 1911082 - 1910909
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||||| |||| |||||||||||||| |||||||||||||  ||||||| | ||   |||||||  ||||| | |||||||||| |||||||     
T  1911082 cgaagttgttattaggttaagtcacgatcaggtcgctctctttaagacgtttcgtggcactagtcaaaattg-tgcaaagcagactatcaaccacgctgc 1910984  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    |||||| |||||||||| ||| ||||||||||||| ||||||| |||| | |||| || | ||||||| ||||||    
T  1910983 ctccagtataaaacaagctcaactacaactgtgcggttaactactgcactgtagaaaaccattcgagatttacac 1910909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 28559769 - 28559593
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||||||||||  | || ||||||| |||||  ||||||| | ||||||||||||  ||||||| | |||||||| |||||     
T  28559769 accgaagttgttactaggttgagtcacgacaatgtcgctctctataagacgtttcgtggcactgtccaaaattg-tgcaaggcaaactatcaaccacgcc 28559671  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||| |||||||||| |||  ||| || |||||| ||||||||||||||| | || | || |||||||||||||||||    
T  28559670 gtctgcaggataaaataagcccagttagaactgttcgattaactattgcactgtaaaaaaccgttcgagaattacacc 28559593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 38182336 - 38182165
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||| ||||||||||| |  ||||||| | ||  |||| |||  ||||||| ||| |||||| ||||| | ||||||||||||||    
T  38182336 ggttgagtcacgaccaggtcgctctctttaaaacgtttcgtggcacttcccaagattg-tgcaaggcagattatcaaccacgccgcctccaggataaaac 38182238  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||  |||||||||||||||  ||||||| |||| |||| | || ||||||||| ||||||| | ||||||||    
T  38182237 aagcacagctacaactgtgctgttaactactgcactataaaaaaccgttcgagatttacaccttcaaatatgg 38182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 106 - 253
Target Start/End: Original strand, 18259898 - 18260044
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaat 205  Q
    |||||||| ||||  ||||  ||||||||||||||||| |||||| |||| |||||  |||||  |||||| ||||||||||||||||||||||| ||||    
T  18259898 actatcaaccacgtcgtctttaggataaaacaagttcaactacaa-tgtgtgattagttattgtgttatagctaatcgttcgagaattacaccctcaaat 18259996  T
Q  206 atggctattaaagtcattcgaatttaacattgaaatcattttaatatg 253  Q
    ||| ||||||| | || |||||||||| | | |||||| | |||||||    
T  18259997 atgcctattaaggccactcgaatttaatacttaaatcactctaatatg 18260044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 168
Target Start/End: Original strand, 24090607 - 24090753
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||| ||  ||||||| ||| |||||||||||      
T  24090607 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaagttg-tgcaaggcagaatatcaatcacgtc 24090705  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattg 168  Q
    | ||||| ||||||||||| | | ||||||||||||| ||||||||||    
T  24090706 gcctccaagataaaacaagcttatctacaactgtgcggttaactattg 24090753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 31030518 - 31030623
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| |||||||||||||| ||||| |||||||||||||  ||||| ||| ||  |||||  ||||||||||||||||| ||| ||||| |||||||||    
T  31030518 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcgacactacccaaa--ttatgcaaggtagactaacaaccacgccgtctccagg 31030615  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  31030616 ataaaaca 31030623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 24 - 139
Target Start/End: Complemental strand, 43302831 - 43302716
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||||| || ||||| |||| | ||| | |||||||||||  ||||||| | |||||||||| || |||||||||||||||||| ||||| | |    
T  43302831 gaagttgttattaggctgagttacgacccggtcgttctctttaagacgtttcgtggcactgtccaaaaattgtgcaaggtagactatcaaccacgccgcc 43302732  T
Q  124 tccaggataaaacaag 139  Q
    ||||||||||||||||    
T  43302731 tccaggataaaacaag 43302716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 24 - 170
Target Start/End: Original strand, 34118449 - 34118594
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| |||||| || ||||||| |||||||||| ||||  | |    
T  34118449 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaa-ttgtgcaaggcagactatcaaccacgtcgcc 34118547  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    |  |||||||||||||  |||||||||||||||  ||||||| ||||    
T  34118548 tttaggataaaacaagcccagctacaactgtgctgttaactactgca 34118594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 12820403 - 12820467
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    |||||||||||| | | |||||||||||||||||||||| ||||||||||||| |||||| ||||    
T  12820403 actatcaatcacaccgcctccaggataaaacaagttcaggtacaactgtgcgactaactactgca 12820467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 28564920 - 28564758
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggata--aa 134  Q
    ||||||||||||||||||| ||||||| ||| | ||||| |||| |||  |||||||  | ||||  ||||||| || ||||| |||| |||||||  ||    
T  28564920 ggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgtt-caagacagactattaaccacgccgtctgcaggatataaa 28564822  T
Q  135 acaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||  | | || |||||| ||||||||||||||| | |||| || |||||||||||||||||    
T  28564821 acaagcccggttagaactgttcgattaactattgcagtgtagaaaaccgttcgagaattacacc 28564758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 28572543 - 28572381
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggata--aa 134  Q
    ||||||||||||||||||| ||||||| ||| | ||||| |||| |||  |||||||  | ||||  ||||||| || ||||| |||| |||||||  ||    
T  28572543 ggttgagtcacgatcaggtcgctctctataaaacatttcatgacactgctcaaaattgtt-caagacagactattaaccacgccgtctgcaggatataaa 28572445  T
Q  135 acaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||  | | || |||||| ||||||||||||||| | |||| || |||||||||||||||||    
T  28572444 acaagcccggttagaactgttcgattaactattgcagtgtagaaaaccgttcgagaattacacc 28572381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 198
Target Start/End: Complemental strand, 43302705 - 43302630
Alignment:
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||||  ||||| || ||||||| ||||||| |||| | |||| ||||||||||||||||||||    
T  43302705 ctccaggataaaacaagcccagctgcacctgtgcggttaactactgcactgtagaaaatcgttcgagaattacacc 43302630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 209
Target Start/End: Original strand, 2965629 - 2965797
Alignment:
Q  40 tgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaag 139  Q
    |||||||||| ||||| ||||||||||| |  ||||||| | ||| | ||||||  ||||||  | |||||||| ||| | | ||| |||||||||||||    
T  2965629 tgagtcacgaccaggtcgctctctttaaaacgtttcgtggcactgcctaaaattg-tgcaagacacactatcaaccacaccgcctctaggataaaacaag 2965727  T
Q  140 ttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||||||||||| |||  ||||||| |||| | |||| || | || |||| ||||||||| ||||||||    
T  2965728 tccagctacaactatgcagttaactactgcactgtagaaaaccatttgagatttacaccctcaaatatgg 2965797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 5883962 - 5884019
Alignment:
Q  4 aaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctct 61  Q
    ||||||||||||||| |||| ||||||||| ||||||||||||||| ||||| |||||    
T  5883962 aaaaagaattttcattcaccaaagttattactgggttgagtcacgaccaggtagctct 5884019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 165
Target Start/End: Original strand, 7902527 - 7902686
Alignment:
Q  4 aaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatt-tatgcaagg 102  Q
    ||||||||||||||||  || ||||||||||||  ||||||||||| || || ||||||||||| |  |||||||||  |  |||||||| |||  |||     
T  7902527 aaaaagaattttcatctgccaaagttattattga-ttgagtcacgaccaagtcgctctctttaaaatgtttcgtgacattacccaaaattgtat--aaga 7902623  T
Q  103 tagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaacta 165  Q
     | | |||||| ||||| ||||| |||||||||||||| || | |||| ||||||||||||||    
T  7902624 catattatcaaccacgccgtctctaggataaaacaagtccatcaacaattgtgcgattaacta 7902686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 122 - 269
Target Start/End: Original strand, 17793533 - 17793686
Alignment:
Q  122 tctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagata------atcgttcgagaattacacccttaaatatggctatta 215  Q
    |||||| ||||||||||||  | |||||||| ||| |||||||  ||||||||| |||      ||| || ||||||||||  |||| |||| |||||||    
T  17793533 tctccacgataaaacaagtctaactacaactttgctattaacttctgcattatatatatagttaatcctttgagaattacattcttagatatcgctatta 17793632  T
Q  216 aagtcattcgaatttaacattgaaatcattttaatatggtaccgtgaccactct 269  Q
    | ||||||||||||||| |  ||||  ||| ||||||||||  |||||||||||    
T  17793633 aggtcattcgaatttaataccgaaactattataatatggtattgtgaccactct 17793686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 4238336 - 4238280
Alignment:
Q  142 cagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  4238336 cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 4238280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Complemental strand, 4243075 - 4243019
Alignment:
Q  142 cagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  4243075 cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 4243019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27415468 - 27415515
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacga 49  Q
    |||||||||||||||  |||||||||||||||||| |||||||||||||    
T  27415468 ttgaaaaagaatttttgtccaccgaagttattatt-ggttgagtcacga 27415515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 33616832 - 33616727
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| || ||||||||||| ||||| |||||||||||||  ||||| | | ||  ||||   || |||||||||||||| ||| ||||| |||||||||    
T  33616832 attatcggattgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccagg 33616735  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  33616734 ataaaaca 33616727  T

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Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Complemental strand, 40130801 - 40130729
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatt 93  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||    
T  40130801 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaatt 40130729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 12820308 - 12820362
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggt 55  Q
    ||||||| ||||||||||| ||||| ||| ||| | |||||||||||||||||||    
T  12820308 ttgaaaaggaattttcatctaccgaggttgttactaggttgagtcacgatcaggt 12820362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 145 - 198
Target Start/End: Original strand, 10933534 - 10933587
Alignment:
Q  145 ctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||| ||||||||| |||| | |||| ||| ||||||||||||||||    
T  10933534 ctacaactgtgtgattaactactgcactgtagagaattgttcgagaattacacc 10933587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 13584412 - 13584453
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  13584412 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 13584453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 29220318 - 29220359
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||||||| ||||||| ||| |||||||||||    
T  29220318 tgcaaggtagactatcaaccacgctgcctcaaggataaaaca 29220359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 113
Target Start/End: Complemental strand, 4238430 - 4238339
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaa 113  Q
    ||||||||| ||| | ||||||||||||| ||||| ||||||||||| |  |||| || | ||| |||||| || ||||||| ||||||||||    
T  4238430 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaacacgtttcatggcactgcccaaaa-ttgtgcaaggcagactatcaa 4238339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 81; Significance: 4e-38; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 38 - 198
Target Start/End: Complemental strand, 24589262 - 24589103
Alignment:
Q  38 gttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||||| | ||||||||||| |  ||||||||| || |||||||||  |||||| ||||||||||| ||||| |||||||||||||||||    
T  24589262 gttgagtcacgatcagatcgctctctttaaaacgtttcgtgacactttccaaaattg-tgcaagatagactatcaaccacgccgtctccaggataaaaca 24589164  T
Q  138 agttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| || ||||||||||||| ||||||| |||||| |||| || |||||||||||||||||    
T  24589163 agtccaactacaactgtgcggttaactactgcattgtagaaaaccgttcgagaattacacc 24589103  T

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Target: chr6; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 209
Target Start/End: Original strand, 12688947 - 12689138
Alignment:
Q  17 atccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatca 116  Q
    ||||||||||||| ||| | |||||||||| || |||||  ||||||||||||  ||| ||||  ||| ||||||||  ||||||| |||||||||| ||    
T  12688947 atccaccgaagttgttactaggttgagtcatgaccaggtcactctctttaagacgttttgtgatactgcccaaaattg-tgcaaggcagactatcaacca 12689045  T
Q  117 cgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||| ||||||||||||||||||| ||||||||||||||||| ||||||| | || | |||| || ||||||| ||||||||||| || |||||    
T  12689046 cgccgtctccaggataaaacaagctcagctacaactgtgcggttaactactacactgtagaaaaccgttcgacaattacaccctcaattatgg 12689138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 33687718 - 33687531
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    |||||| || ||||| |||||||| || | ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| || ||     
T  33687718 accgaaattgttattaggttgagttaccaccaggtcgctctctttaagacgtttcgtggcactggccaaaattg-tgcaagacagactatcaaccatgcc 33687620  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||||  ||| ||||||||||||| ||||||| |||||| |||| |||| ||||||| ||||||||| ||||||||    
T  33687619 gtctccaggataaaacaaactcaactacaactgtgcggttaactactgcattgtagaaaatccttcgagatttacaccctcaaatatgg 33687531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 209
Target Start/End: Complemental strand, 29892374 - 29892189
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | |||||||||||| |||||| |||||||||||||| ||| ||| | ||| ||||||||  ||||||  | |||||||| ||| |       
T  29892374 cgaagttgttactaggttgagtcacggtcaggtcgctctctttaagaagtttggtggcactgcccaaaattg-tgcaagacaaactatcaaccacacctc 29892276  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||||||||||||||||| |||||||||||||| | |||||||||||||| |||| || | ||||| | ||||||||| ||||||||    
T  29892275 ctccaggataaaacaagtccagctacaactgtgtggttaactattgcattgtagaaaacctttcgatatttacaccctcaaatatgg 29892189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 6407975 - 6407800
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||||||||| |||||||| ||||  ||||||| | ||| ||||||||  | ||| | |||||||||| |||||     
T  6407975 accgaagttgttactaggttgagtcacgatcaggtcgctctcttgaagacgtttcgtggcactgcccaaaattg-tacaaagcagactatcaaccacgcc 6407877  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| ||||||||||||||||| ||||||| | || | |||| || ||||| |||||||||||    
T  6407876 gcctccaggataaaacaagctcagctacaactgtgcggttaactact-cactgtagaaaaccgttcaagaattacacc 6407800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 11570864 - 11570677
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||| | ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||| ||||| |||||     
T  11570864 accgaagttgttactaggttgagtcacaaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagacaatcaaccacgcc 11570766  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | ||||||||||||||||| ||||||||||||||||| | ||||| | |  | |||| || ||||| ||||||| ||||| ||||||||    
T  11570765 gcctccaggataaaacaagctcagctacaactgtgcggtgaactactccgctgtagaaaaccgttccagaattataccctcaaatatgg 11570677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 2700221 - 2700046
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||| | |||||||||||||  ||||||| | |||| |||||||  ||||||  |||||||||| |||||     
T  2700221 accgaagttgttactaggttgagtcacgaccagatcgctctctttaagacgtttcgtggcactgttcaaaattg-tgcaagacagactatcaaccacgcc 2700123  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |  ||||||||||||||||  || |||||||||| |||||||||| |||| | |||| ||||| ||||||||||||||    
T  2700122 gcttccaggataaaacaagcccaactacaactgttcgattaactactgcactgtagaaaatcg-tcgagaattacacc 2700046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 17964634 - 17964487
Alignment:
Q  61 tctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgatt 160  Q
    |||||||||  ||||||| | || |||||||||  ||||||| |||||||||| ||||| | |||||||||||||||||  ||||| |||||||||| ||    
T  17964634 tctttaagacgtttcgtggcactatccaaaattg-tgcaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctgcaactgtgcggtt 17964536  T
Q  161 aactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||| |||| | |||| || ||||||||||||||||| | ||||||||    
T  17964535 aactactgcactgtagaaaaccgttcgagaattacaccttcaaatatgg 17964487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 24 - 198
Target Start/End: Original strand, 8747765 - 8747938
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | ||||||||||||| ||||| |||||||||||||  || |||||| ||| ||||||||  ||||||  || |||||||  |||| | |    
T  8747765 gaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgttccgtgacactgcccaaaattg-tgcaagacaggctatcaacaacgccgcc 8747863  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||||||||| |||||| ||||| || | ||||||| |||| | |||| || ||||||| |||||||||    
T  8747864 tccaggataaaacaagctcagctgcaactatgtggttaactactgcactgtagaaaaccgttcgaaaattacacc 8747938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 48 - 198
Target Start/End: Original strand, 14508991 - 14509140
Alignment:
Q  48 gatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagcta 147  Q
    ||||| || |||||||| ||||  ||||||| | |||| |||||||  ||||||  ||| |||||| ||||| |  |||| ||||||||||| ||| |||    
T  14508991 gatcatgtcgctctcttcaagacgtttcgtgtcactgttcaaaattg-tgcaagacagattatcaaccacgccgcttccaagataaaacaagctcatcta 14509089  T
Q  148 caactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||| |||||||||| |||||| |||| ||||||||||||||||||||    
T  14509090 caactgttcgattaactactgcattgtagaaaatcgttcgagaattacacc 14509140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 37 - 209
Target Start/End: Complemental strand, 20748383 - 20748213
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||| || |||||||| |  |||| ||   ||||||||||||  |||||||  ||||||||| ||||| | |||||| |||||||    
T  20748383 ggttgagtcacgaccaggtcgccctctttaacatgtttcatggtactgtccaaaattg-tgcaaggccgactatcaaccacgccgcctccagaataaaac 20748285  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||| || ||||||||||||| ||||||| ||||   |||| ||  |||||||||||||| ||||||||||||    
T  20748284 aagtccatctacaactgtgcggttaactactgcaccgtagaaaacggttcgagaattaca-ccttaaatatgg 20748213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 200
Target Start/End: Complemental strand, 16836231 - 16836093
Alignment:
Q  61 tctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgatt 160  Q
    |||||||||  ||||||| | ||| ||||||||  | ||||| |||||||||| ||||| | |||||||||||||||||  |||||||||||||||| ||    
T  16836231 tctttaagacgtttcgtggcactgcccaaaattg-tacaaggcagactatcaaccacgccgcctccaggataaaacaagcccagctacaactgtgcggtt 16836133  T
Q  161 aactattgcattatagataatcgttcgagaattacaccct 200  Q
    |  || |||| | |||| || |||||||||||||||||||    
T  16836132 agttactgcactgtagaaaaccgttcgagaattacaccct 16836093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 23 - 170
Target Start/End: Original strand, 21309013 - 21309159
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||| | ||  | |||||||||||||  |||| || | ||| ||||||||  ||||| | |||||||||| ||||| |     
T  21309013 cgaagttgttactaggttgagtcactaccatatcgctctctttaagacgtttcatggcactgcccaaaattg-tgcaatgcagactatcaaccacgccgc 21309111  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| ||||    
T  21309112 ctccaggataaaacaagctcagctacaactgtgcggttaactactgca 21309159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 11534725 - 11534639
Alignment:
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||| ||| ||||||||||||| | ||||| |||||| |||| || ||||| ||||||||||||| ||||||||    
T  11534725 ctccaggataaaacaagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatgg 11534639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 123 - 209
Target Start/End: Complemental strand, 11560235 - 11560149
Alignment:
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||| ||| ||||||||||||| | ||||| |||||| |||| || ||||| ||||||||||||| ||||||||    
T  11560235 ctccaggataaaacaagctcaactacaactgtgcggtgaactactgcattgtagaaaaccgttccagaattacaccctcaaatatgg 11560149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 110 - 209
Target Start/End: Complemental strand, 4157396 - 4157297
Alignment:
Q  110 tcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    |||| ||| ||| ||| ||||||||||||  ||||||||||| ||||| ||||||| |||| | |||| |||||||||| | ||||||||||||||||||    
T  4157396 tcaaccacactgcctctaggataaaacaaactcagctacaacggtgcggttaactactgcactgtagaaaatcgttcgaaatttacacccttaaatatgg 4157297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 25316579 - 25316494
Alignment:
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatat 207  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| |||| | |||| ||  ||||||||||| |||||| ||||||    
T  25316579 gtctccaggataaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaaatat 25316494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 207
Target Start/End: Complemental strand, 26204073 - 26203988
Alignment:
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatat 207  Q
    ||||||||||||||||||||||| ||||||| ||||| ||||||| |||| | |||| ||  ||||||||||| |||||| ||||||    
T  26204073 gtctccaggataaaacaagttcatctacaaccgtgcggttaacta-tgcactgtagaaaactgttcgagaattgcaccctcaaatat 26203988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 170
Target Start/End: Complemental strand, 12406468 - 12406320
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | | ||||||||||| ||||| |||||||| ||||  ||||||| |  || || ||| || ||||||| ||||||||||||||||     
T  12406468 accgaagttgttactagattgagtcacgaccaggtcgctctcttaaagacgtttcgtggcagtg-cctaaagttgtgcaaggaagactatcaatcacgcc 12406370  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    | || || ||||||||| | ||| ||||||||||| | ||||||| ||||    
T  12406369 gccttcatgataaaacatgctcaactacaactgtgtggttaactactgca 12406320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 13736793 - 13736617
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||| | | |||||  ||||||||| ||  ||||||| | ||| | ||||||  ||||||| |||||| ||| ||| ||    
T  13736793 accgaagttgttactaggttgagtcgccaccaggtccctctctttacgacgtttcgtggcactgcctaaaattg-tgcaaggaagactaccaaccacact 13736695  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  || |||||| ||||||| |||||| |||| | |||| ||  |||||||| |||||||    
T  13736694 gcctccaggataaaacaagcacatctacaaatgtgcgaataactactgcactgtagaaaactgttcgagatttacacc 13736617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 37 - 177
Target Start/End: Complemental strand, 22695370 - 22695231
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||| |||||| | |||||||||||||| |  |||||||||  ||  |||||||  ||||||  | || ||||||||| | | ||||| ||||||||    
T  22695370 ggttgagacacgattatgttgctctctttaacacgtttcgtgacattgctcaaaattg-tgcaagacatacaatcaatcacaccgcctccacgataaaac 22695272  T
Q  137 aagttcagctacaactgtgcgattaactattgcattataga 177  Q
    |||| |||||||||||||||| ||||| | |||||| ||||    
T  22695271 aagtacagctacaactgtgcggttaaccactgcattgtaga 22695231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 23 - 170
Target Start/End: Complemental strand, 11614205 - 11614059
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | |||||||||||||| |||||| ||||||||| |  |||  || | |||  |||||||  ||||||| |||||||||| ||||| |     
T  11614205 cgaagttgttactaggttgagtcacgatgaggttgttctctttaaaacgttttatggcactgctcaaaattg-tgcaaggcagactatcaaccacgccgc 11614107  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
    |||||||||||||||||  ||  ||||| |||||| ||||||| ||||    
T  11614106 ctccaggataaaacaagcacaattacaattgtgcggttaactaatgca 11614059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 9751944 - 9751747
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaat-ttatgca 99  Q
    ||||||| ||||||||||| ||| ||||| | | | |||||||||||||  || | ||||||||||||| |||| ||| | ||  ||||||  || ||||    
T  9751944 ttgaaaaggaattttcatctaccaaagttgtcactaggttgagtcacgaatag-tcgctctctttaagacattttgtggcactacccaaaaaattgtgca 9751846  T
Q  100 aggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||   |||||||||||||  ||||  ||||||||| ||||  | |||||| |||||||||||||| |||| | ||||  | | |||||||||||||||    
T  9751845 aggggaactatcaatcacgtcgtctgtaggataaaataagtctaactacaattgtgcgattaactactgcactgtagaacaccattcgagaattacacc 9751747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 13605191 - 13605092
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    ||||||||||||||  ||||||||||||||||||  ||||| | | ||  ||||   || |||||||||||||| ||| ||||| |||||||||||||||    
T  13605191 gggttgagtcacgactaggttgctctctttaagacgtttcgcggcactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 13605094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 102
Target Start/End: Original strand, 11428023 - 11428104
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaagg 102  Q
    ||||||||| ||||| | ||||||||||| ||||| |||||||||||||  ||||||| | ||| |||||| || |||||||    
T  11428023 accgaagttgttattagattgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaagttgtgcaagg 11428104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 15991780 - 15991661
Alignment:
Q  97 gcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattaca 196  Q
    |||||||||| | |||| || || | ||| |||||||||||||||||||| ||| |||||  ||||||| |||| | | || || |||| ||||||||||    
T  15991780 gcaaggtagattttcaaccaagccgcctctaggataaaacaagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattaca 15991681  T
Q  197 cccttaaatatggctattaa 216  Q
    |  | |||||||| ||||||    
T  15991680 caatcaaatatgggtattaa 15991661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 97 - 216
Target Start/End: Complemental strand, 15999442 - 15999323
Alignment:
Q  97 gcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattaca 196  Q
    |||||||||| | |||| || || | ||| |||||||||||||||||||| ||| |||||  ||||||| |||| | | || || |||| ||||||||||    
T  15999442 gcaaggtagattttcaaccaagccgcctctaggataaaacaagttcagctgcaattgtgcagttaactactgcactgtcgaaaaccgtttgagaattaca 15999343  T
Q  197 cccttaaatatggctattaa 216  Q
    |  | |||||||| ||||||    
T  15999342 caatcaaatatgggtattaa 15999323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 30 - 69
Target Start/End: Complemental strand, 31476120 - 31476081
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaaga 69  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  31476120 attatcgggttgagtcacgatcaggttgctcactttaaga 31476081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 69
Target Start/End: Complemental strand, 6113073 - 6113039
Alignment:
Q  35 tgggttgagtcacgatcaggttgctctctttaaga 69  Q
    ||||||||||||||||||||||||| |||||||||    
T  6113073 tgggttgagtcacgatcaggttgctttctttaaga 6113039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Original strand, 22609632 - 22609689
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaac 163  Q
    ||||||| |||||| | ||||||||||||||||| ||| ||||||||| | |||||||    
T  22609632 actatcagtcacgccgcctccaggataaaacaagctcaactacaactgcgtgattaac 22609689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 31495946 - 31495909
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaa 67  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  31495946 attatcgggttgagtcacgatcaggttgctcactttaa 31495909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 31501332 - 31501295
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaa 67  Q
    ||||| ||||||||||||||||||||||||| ||||||    
T  31501332 attatcgggttgagtcacgatcaggttgctcactttaa 31501295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 10002 - 9826
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||  ||||||| |||||||||| |||||     
T  10002 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaattg-tgcaaggcagactatcaaccacgcc 9904  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | |||||||||||||||||  ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  9903 gcctccaggataaaacaagcccagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 9826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 8e-33; HSPs: 30)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 23 - 210
Target Start/End: Complemental strand, 19799126 - 19798940
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||||||| | |||||||||||||  ||||||| | || |||||||||  ||||||  |||||||||| ||||| |     
T  19799126 cgaagttgttactaggttgagtcacgatcagatcgctctctttaagacgtttcgtggcactatccaaaattg-tgcaagacagactatcaaccacgccgc 19799028  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatggc 210  Q
    |||||||||||||||||  |||||||||||||||| ||||||| |||| | |||| || ||||||||| ||||||| | |||||||||    
T  19799027 ctccaggataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagatttacaccttcaaatatggc 19798940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 21 - 209
Target Start/End: Complemental strand, 16649727 - 16649541
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| |  |||||||||||| ||||| |||||||||||||  ||| ||| | ||||||||||||  |||||| ||||||||||| |||||     
T  16649727 accgaagttgttactaagttgagtcacgaccaggtcgctctctttaagacgttt-gtggcactgtccaaaattg-tgcaagatagactatcaaccacgcc 16649630  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    | |||| ||||||||||||| |||||||||||||| | ||||||| |||| | |||| ||  |||||||||||||||||| ||||||||    
T  16649629 gcctccgggataaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaactgttcgagaattacaccctcaaatatgg 16649541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 47455505 - 47455350
Alignment:
Q  17 atccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatca 116  Q
    ||||||||||||| ||||| ||||||||||||| ||||| |||||||||||||  ||||||| |  ||||||||| || ||||||  ||| |||||| ||    
T  47455505 atccaccgaagttgttattaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcaatgtccaaaa-ttgtgcaagacagattatcaacca 47455407  T
Q  117 cgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcatta 173  Q
    ||| | |||||||||||||||||   |||||||||||| |||||||||| |||||||    
T  47455406 cgccgcctccaggataaaacaagcctagctacaactgttcgattaactactgcatta 47455350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 269
Target Start/End: Original strand, 38620673 - 38620915
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||||||||| ||||||||| ||| ||| |  ||||||||||||  ||||||| |  |||||||||||  ||||||| ||||||||||  ||||     
T  38620673 accgaagttattattaggttgagtcgcgaccagatcactctctttaagacgtttcgtg-cattgtccaaaattg-tgcaaggcagactatcaactacgcc 38620770  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatggctattaaagtc 220  Q
    | ||||| |||||||||||| || ||||||||||||| ||||||| |||||| |||| ||  ||| |||| ||||||||| |||||||| ||||||   |    
T  38620771 gcctccaagataaaacaagtccaactacaactgtgcggttaactactgcattgtagaaaactgtttgagatttacaccctaaaatatgg-tattaagacc 38620869  T
Q  221 attcgaatttaacattgaaatcattttaatatggtaccgtgaccactct 269  Q
    | ||   ||||| | |||||||| |||||||||||| ||| ||||||||    
T  38620870 actc---tttaatactgaaatcactttaatatggtatcgtcaccactct 38620915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 23192932 - 23192757
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| |||||| || | ||||| |||||||||| |||||     
T  23192932 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaa-ttgtacaaggcagactatcaaccacgcc 23192834  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
      |||||||||||||||||  ||||||||| ||| |||||||||| |||| | |||| || |||||||||||||||||    
T  23192833 tcctccaggataaaacaag-ccagctacaattgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 23192757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 39588486 - 39588306
Alignment:
Q  17 atccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatca 116  Q
    |||||||||| || ||| | |||| |||||||||||||| |||||||||||||  ||||||| | |||||||||| || ||||||  |||||||| | ||    
T  39588486 atccaccgaaattgttactaggttaagtcacgatcaggtcgctctctttaagacgtttcgtggcactgtccaaaa-ttgtgcaagacagactatctacca 39588388  T
Q  117 cgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||   |||||||||||| |||| ||| |||||| ||| |||||||||| |||| | |||| || |||||||||||||||||    
T  39588387 cgcctactccaggataaagcaagctcatctacaattgttcgattaactactgcagtgtagaaaaccgttcgagaattacacc 39588306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 47451344 - 47451164
Alignment:
Q  17 atccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatca 116  Q
    |||||||||| |||||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| |||||| || ||||||  |||||||||| ||    
T  47451344 atccaccgaaattattactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactg-ccaaaaattgtgcaagacagactatcaacca 47451246  T
Q  117 cgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||| | ||||| ||||||||||| ||| |||||||||| |||||||||| || | |  ||| || |||||||||||||||||    
T  47451245 cgccgcctccaagataaaacaagctcaactacaactgttcgattaactactgtactgcagaaaaccgttcgagaattacacc 47451164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 39 - 209
Target Start/End: Complemental strand, 33301277 - 33301108
Alignment:
Q  39 ttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaa 138  Q
    |||| |||||| ||||| | |||||||||||  ||||||| | ||| ||||||||  ||||||  |||||||||| ||||| | ||||||||||||||||    
T  33301277 ttgaatcacgaccaggtcgttctctttaagacgtttcgtggcactgcccaaaattg-tgcaagacagactatcaaccacgccgcctccaggataaaacaa 33301179  T
Q  139 gttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
     |||| ||||||||||||| ||||||| |||| | |||| ||  |||||||||||||||| | ||||||||    
T  33301178 tttcatctacaactgtgcggttaactactgcactgtagaaaactgttcgagaattacaccttcaaatatgg 33301108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 21 - 210
Target Start/End: Original strand, 10135436 - 10135624
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||  | ||||||  ||||||| |||| ||||| |||||     
T  10135436 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactacctaaaattg-tgcaaggcagacaatcaaccacgcc 10135534  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatggc 210  Q
    | ||| |||||||||||||  ||| | |||||||||| ||||||| |||| | |||| || ||||| ||||||||||||| |||||||||    
T  10135535 gcctctaggataaaacaagcccagttgcaactgtgcggttaactactgcactgtagaaaaccgttcaagaattacaccctcaaatatggc 10135624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 209
Target Start/End: Original strand, 8138020 - 8138106
Alignment:
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
    ||||||||||||||||| ||||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| ||||||||    
T  8138020 ctccaggataaaacaagctcagctacaactgtgcggttaactactgcaatgtagaaaaccgttcgagaattacaccctcaaatatgg 8138106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 21 - 191
Target Start/End: Complemental strand, 51041576 - 51041409
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| |  |||||||||||| ||||| ||||| |||||||  ||||||| | ||| |||||  || ||||||| |||||||||| |||||     
T  51041576 accgaagttgttactaagttgagtcacgaccaggtcgctct-tttaagacgtttcgtggcactgcccaaa--ttgtgcaaggcagactatcaaccacgcc 51041480  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaa 191  Q
    | ||||| |||||||||||  ||||||||||||| ||||||| || |||| | |||| |||||||||||||    
T  51041479 gcctccaagataaaacaagcccagctacaactgttcgattaattactgcactgtagaaaatcgttcgagaa 51041409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 26927837 - 26927661
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | |||||||||||||  | || |||||||||||||  ||||||| |  || ||||||||  ||||||| |||||||||| |||||     
T  26927837 accgaagttgttactaggttgagtcacgactaagtcgctctctttaagacgtttcgtggcattgcccaaaattg-tgcaaggcagactatcaaccacgcc 26927739  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||| |  ||||||||||  ||||||||||||| |  ||||||| |||| | |||| ||||||||||||||||||||    
T  26927738 gcctctaaaataaaacaagcccagctacaactgtacacttaactactgcactgtagaaaatcgttcgagaattacacc 26927661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 105 - 209
Target Start/End: Original strand, 25843819 - 25843923
Alignment:
Q  105 gactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaa 204  Q
    ||||||||| ||||| | |||||| ||||||||||  |||||||||||||||| ||||||| |||| | |||| || ||||||||||||||||||| | |    
T  25843819 gactatcaaccacgccgcctccagtataaaacaagcccagctacaactgtgcggttaactactgcactgtagaaaaccgttcgagaattacaccctcata 25843918  T
Q  205 tatgg 209  Q
    |||||    
T  25843919 tatgg 25843923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 21 - 197
Target Start/End: Original strand, 40165960 - 40166135
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| || || |||||||||||||  ||||||| | ||| |||||| || ||||||| |||||| |||  ||||     
T  40165960 accgaagttgttactaggttgagtcacgaccatgtcgctctctttaagacgtttcgtggcactgcccaaaa-ttgtgcaaggcagactaacaacaacgcc 40166058  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacac 197  Q
    | ||| |||||||||||||  || |||||||| | |||||||||| |||| | |||| || ||||||| | ||||||    
T  40166059 gcctctaggataaaacaagcacaactacaactatacgattaactactgcactgtagaaaaccgttcgaaatttacac 40166135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 23 - 146
Target Start/End: Complemental strand, 18784661 - 18784540
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||||||||||| ||||| ||||||| |||||||| | ||| | ||||||  ||||||| |||||||||| ||||| |     
T  18784661 cgaagttgttactaggttgagtcacgatcaggtcgctct-tttaagacatttcgtggcactgcctaaaattg-tgcaaggcagactatcaaccacgccgc 18784564  T
Q  123 ctccaggataaaacaagttcagct 146  Q
    |||||| ||||||||||| |||||    
T  18784563 ctccagaataaaacaagtccagct 18784540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 21 - 170
Target Start/End: Original strand, 10140069 - 10140217
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||||||||| ||||||||||| |  ||||||| | ||   ||||| || ||||||| |||| ||||| |||||     
T  10140069 accgaagttgttactaggttgagtcacgatcaggtcgctctctttaacacgtttcgtggcactactcaaaa-ttgtgcaaggcagacaatcaaccacgcc 10140167  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgca 170  Q
      ||| |||||||||||||  ||||| |||||||||| ||||||| ||||    
T  10140168 acctctaggataaaacaagcccagctgcaactgtgcggttaactactgca 10140217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 124 - 198
Target Start/End: Original strand, 16833566 - 16833640
Alignment:
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||||   |||||||||||||| |||||||||| |||||| |||| || ||||||| |||||||||    
T  16833566 tccaggataaaacagcctcagctacaactgttcgattaactactgcattgtagaaaaccgttcgaaaattacacc 16833640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 12259979 - 12260131
Alignment:
Q  24 gaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtc 123  Q
    |||||| ||| | ||||||| ||||| || || |||||||||||||  ||||||||| ||| |||||| || ||||||  |||||||||| ||||| |||    
T  12259979 gaagttgttacttggttgagacacgaccatgtcgctctctttaagacgtttcgtgacactgcccaaaa-ttgtgcaagacagactatcaaccacgccgtc 12260077  T
Q  124 tccaggataaaacaagttcagctacaactgtgcgattaactattgcattataga 177  Q
    |  ||||||||||||   ||  ||||||| |||| ||||||| ||||| |||||    
T  12260078 tttaggataaaacaaacacatgtacaactatgcggttaactactgcataataga 12260131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 170
Target Start/End: Original strand, 16035604 - 16035736
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||||| ||||| || |||||||| |  ||||||| | ||||||||| ||  ||||||  ||| |||||| ||||| | ||||||||||||||    
T  16035604 ggttgagtcacgaccaggtcgccctctttaacacgtttcgtggcactgtccaaagttg-tgcaagacagattatcaaccacgccgcctccaggataaaac 16035702  T
Q  137 aagttcagctacaactgtgcgattaactattgca 170  Q
    ||| ||| |||||| |||| | ||||||| ||||    
T  16035703 aagctcatctacaaatgtgtggttaactactgca 16035736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 39747270 - 39747165
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| |||||||||||||| |||||||||||||||||||  ||||| | | ||  ||  || || |||||||||||||| ||| ||||  |||||||||    
T  39747270 attatcgggttgagtcacgaccaggttgctctctttaagacgtttcgcggcactaccc--aagttgtgcaaggtagactagcaaccacgtcgtctccagg 39747173  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  39747172 ataaaaca 39747165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 138
Target Start/End: Original strand, 10106099 - 10106199
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    |||||||||||||| ||||| |||||||||||||  ||||| | | ||  ||||   || |||||||||||||| ||| ||||| |||||||||||||||    
T  10106099 gggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 10106196  T
Q  136 caa 138  Q
    |||    
T  10106197 caa 10106199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 162
Target Start/End: Original strand, 5346725 - 5346783
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaa 162  Q
    |||||||||||||||| | ||||| ||| |||||||||||||||||||| ||| |||||    
T  5346725 agactatcaatcacgccgcctccaagatgaaacaagttcagctacaactatgcaattaa 5346783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 104 - 198
Target Start/End: Complemental strand, 28434607 - 28434513
Alignment:
Q  104 agactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||||| |  || ||||||||||||||||||||||| |||||| |||||  ||||||| |  | |||||| || ||||||||| |||||||    
T  28434607 agactatcaaccttgccgtctccaggataaaacaagttcaactacaattgtgcagttaactactttactatagaaaaccgttcgagatttacacc 28434513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 113
Target Start/End: Original strand, 3094094 - 3094185
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaa 113  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  |||| || | ||| |||||| || ||||||| ||||||||||    
T  3094094 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcatggcactgcccaaaa-ttgtgcaaggcagactatcaa 3094185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 142 - 198
Target Start/End: Original strand, 3094188 - 3094244
Alignment:
Q  142 cagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    ||||||||||||| |||||||||| |||| | |||| || |||||||||||||||||    
T  3094188 cagctacaactgttcgattaactactgcactgtagaaaaccgttcgagaattacacc 3094244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 14582089 - 14582194
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| ||||||||| |||||||||| |||||||||||||| ||||| | | ||  ||   | || |||||||||||||| ||| ||| | |||||||||    
T  14582089 attatcgggttgagttacgatcaggtcgctctctttaagaagtttcgcggcactaccc--tagttgtgcaaggtagactaacaaccacaccgtctccagg 14582186  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  14582187 ataaaaca 14582194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 93
Target Start/End: Original strand, 25855151 - 25855223
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatt 93  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||| | ||| ||||||||    
T  25855151 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtggcactgcccaaaatt 25855223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 38734265 - 38734370
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| |||||||||||||| ||||| |||||||||||||  ||||| | | ||  || |   || |||||||||||||| ||| ||||| |||||||||    
T  38734265 attatcgggttgagtcacgaccaggtcgctctctttaagacgtttcgcggcactaccctag--ttgtgcaaggtagactaacaaccacgccgtctccagg 38734362  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  38734363 ataaaaca 38734370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 147
Target Start/End: Original strand, 8900234 - 8900359
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||  | ||||||||||| |  ||| ||||| ||||| ||| ||  |||||   | |||||||||||| |     
T  8900234 accgaagttgttactaggttgagtcacgaccatatcgctctctttaaaacgttttgtgacactgtctaaagttg-tgcaaaacatactatcaatcacacc 8900332  T
Q  121 gtctccaggataaaacaagttcagcta 147  Q
    | |||||||||||||||||||||||||    
T  8900333 gcctccaggataaaacaagttcagcta 8900359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Complemental strand, 26651207 - 26651166
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  26651207 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 26651166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 83046 - 83222
Alignment:
Q  21 accgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgct 120  Q
    ||||||||| ||| | ||||||||||||| ||||| |||||||||||||  ||||||||| |   |||||||| |||||||| |||||||||| || ||     
T  83046 accgaagttgttactaggttgagtcacgaccaggtcgctctctttaagacgtttcgtgacaccacccaaaatt-atgcaaggcagactatcaaccatgcc 83144  T
Q  121 gtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    | ||||||||||||||||| |||||| |||||||||| ||||||| |||| | |||| || | |||||||||||||||    
T  83145 gcctccaggataaaacaagctcagctgcaactgtgcggttaactactgcactgtagaaaacctttcgagaattacacc 83222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 57 - 190
Target Start/End: Original strand, 35650 - 35782
Alignment:
Q  57 gctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgc 156  Q
    |||||||||||||  ||||||||| ||| ||||||||  ||||||| |||||||||| ||||| | |||||||||||||||||| |||||||||||||||    
T  35650 gctctctttaagacgtttcgtgacactggccaaaattg-tgcaaggcagactatcaaccacgccgcctccaggataaaacaagtccagctacaactgtgc 35748  T
Q  157 gattaactattgcattatagataatcgttcgaga 190  Q
    | ||||||| |||| | |||| ||||||||||||    
T  35749 ggttaactactgcactgtagaaaatcgttcgaga 35782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 265
Target Start/End: Original strand, 8852 - 9114
Alignment:
Q  1 ttgaaaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaa 100  Q
    ||||||||||||||||||||||||||| || || |   ||| |||| ||||| || ||| | ||||||| |||||||||| |    ||||||| ||| ||    
T  8852 ttgaaaaagaattttcatccaccgaagctactacta--ttgtgtcatgatcaagtcgctatgtttaagacatttcgtgacacaactcaaaatt-atgtaa 8948  T
Q  101 ggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacaccct 200  Q
    || |||||||||||||||  | || |||||||||||||||  ||||  |||| |||||||||||| |||||| || | |||| ||| |||||||||||||    
T  8949 ggaagactatcaatcacgtcgccttcaggataaaacaagtctagctgtaactatgcgattaactactgcattgtacaaaatcattcaagaattacaccct 9048  T
Q  201 taaatatggctattaaa-gtcattcgaatttaacattgaaatcattttaatatggtaccgtgacca 265  Q
     | |||||||||||||| |||| || ||||  ||||||||| || | ||||||||||  |||||||    
T  9049 catatatggctattaaaggtcactcaaattgtacattgaaaccactctaatatggtattgtgacca 9114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1050 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 93 - 198
Target Start/End: Original strand, 1191 - 1296
Alignment:
Q  93 ttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaat 192  Q
    ||||||||||  |||||| || ||||||| |||||||  ||||||||||||||||| |||||||| ||||||| |||| |||||| |||||||||||| |    
T  1191 ttatgcaaggcggactataaaccacgctgcctccaggcaaaaacaagttcagctacgactgtgcggttaactactgcactatagaaaatcgttcgagatt 1290  T
Q  193 tacacc 198  Q
    ||||||    
T  1291 tacacc 1296  T

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Target: scaffold0184 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 265
Target Start/End: Original strand, 2273 - 2531
Alignment:
Q  5 aaaagaattttcatccaccgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggta 104  Q
    ||||||||||||||  | ||||||| ||||| |||||||||| |||||||| | ||||||||| |  ||| ||| |  |||  ||||||  ||||||  |    
T  2273 aaaagaattttcatttatcgaagttgttattaggttgagtcatgatcaggtcgttctctttaatacgttttgtgccattgtttaaaattg-tgcaagaca 2371  T
Q  105 gactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaa 204  Q
    || |||||| ||||| | ||| || |||||||||  |||| |||||||||| ||||||||| ||||   |||| ||| ||| ||||||||||||||||||    
T  2372 ga-tatcaaccacgccgcctctagtataaaacaaactcaggtacaactgtgagattaactactgcaccgtagaaaattgttggagaattacacccttaaa 2470  T
Q  205 tatggctattaaagtcattcgaatttaacattgaaatcattttaatatggtaccgtgacca 265  Q
    |||| ||||||| | || || ||||||| ||||||| || |  |||||||||  |||||||    
T  2471 tatgtctattaaggccactcaaatttaatattgaaaccactaaaatatggtattgtgacca 2531  T

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Target: scaffold0012 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 37 - 198
Target Start/End: Complemental strand, 166185 - 166025
Alignment:
Q  37 ggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaac 136  Q
    ||||||||||| | ||||| |||||||||||||  ||||||| | ||| |||||| || ||||||  | |||||||| ||||| | ||||||||||||||    
T  166185 ggttgagtcacaaccaggtcgctctctttaagacgtttcgtggcactg-ccaaaaattgtgcaagacatactatcaaccacgccgcctccaggataaaac 166087  T
Q  137 aagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||  ||||| |||||||||| |||| || |||| | || | || |||||||||||||||||    
T  166086 aagcccagctgcaactgtgcggttaattactgcactgtaaaaaaccgttcgagaattacacc 166025  T

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Target: scaffold0008 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 216
Target Start/End: Original strand, 255898 - 255991
Alignment:
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatggctattaa 216  Q
    |||||||||||||||||| |||||||||||||| | ||||||| |||| | |||| || |||||||| |||||||||| ||||||| |||||||    
T  255898 ctccaggataaaacaagtccagctacaactgtgtggttaactactgcactgtagaaaaccgttcgaggattacaccctcaaatatgactattaa 255991  T

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Target: scaffold0054 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 106 - 198
Target Start/End: Original strand, 29219 - 29311
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacc 198  Q
    |||||||| ||||| |||| |||||||||| ||||  | ||| ||||||||| ||||||| |||||| |||| || |||||||||||||||||    
T  29219 actatcaaccacgccgtcttcaggataaaataagtctaactataactgtgcggttaactactgcattgtagaaaaccgttcgagaattacacc 29311  T

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Target: scaffold0054; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 23 - 209
Target Start/End: Original strand, 25381 - 25566
Alignment:
Q  23 cgaagttattattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgt 122  Q
    ||||||| ||| | ||||||||||| || ||||  ||||||||||||  || |||||| |||   ||||||  ||||||  |||||||||| ||||| |     
T  25381 cgaagttgttactaggttgagtcacaattaggtcactctctttaagacgttacgtgacactgcgtaaaattg-tgcaagacagactatcaaccacgccgc 25479  T
Q  123 ctccaggataaaacaagttcagctacaactgtgcgattaactattgcattatagataatcgttcgagaattacacccttaaatatgg 209  Q
     ||||||||||||||||  || ||||||||||||| ||||||| | || | |||| || ||||||||| ||||| | | ||||||||    
T  25480 gtccaggataaaacaagcccaactacaactgtgcggttaactactacactgtagaaaaccgttcgagacttacatcttcaaatatgg 25566  T

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Target: scaffold0132 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 2871 - 2772
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    |||||||||||||| ||||| || ||||||||||  ||||||||| ||  ||||   || |||||||||||||| ||| ||||| |||||||||||||||    
T  2871 gggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 2774  T

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Target: scaffold0132; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 137
Target Start/End: Complemental strand, 10831 - 10732
Alignment:
Q  36 gggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaa 135  Q
    |||||||||||||| ||||| || ||||||||||  ||||||||| ||  ||||   || |||||||||||||| ||| ||||| |||||||||||||||    
T  10831 gggttgagtcacgaccaggtcgcgctctttaagacgtttcgtgacactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccaggataaaa 10734  T

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Target: scaffold0011 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 3)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 165
Target Start/End: Complemental strand, 155528 - 155490
Alignment:
Q  127 aggataaaacaagttcagctacaactgtgcgattaacta 165  Q
    |||||||||||||||||||||||||||||||||||||||    
T  155528 aggataaaacaagttcagctacaactgtgcgattaacta 155490  T

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Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 30 - 137
Target Start/End: Original strand, 1555 - 1660
Alignment:
Q  30 attattgggttgagtcacgatcaggttgctctctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccagg 129  Q
    ||||| ||||| |||||||| ||||| |||||||||||||  ||||| | | ||  ||||   || |||||||||||||| ||| ||||| |||||||||    
T  1555 attatcgggttaagtcacgaccaggtcgctctctttaagacgtttcgcggcactacccaag--ttgtgcaaggtagactaacaaccacgccgtctccagg 1652  T
Q  130 ataaaaca 137  Q
    ||||||||    
T  1653 ataaaaca 1660  T

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Target: scaffold0011; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 96 - 137
Target Start/End: Original strand, 7100 - 7141
Alignment:
Q  96 tgcaaggtagactatcaatcacgctgtctccaggataaaaca 137  Q
    |||||||||||||| ||| ||||| |||||||||||||||||    
T  7100 tgcaaggtagactaacaaccacgccgtctccaggataaaaca 7141  T

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Target: scaffold0128 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 61 - 165
Target Start/End: Original strand, 13292 - 13395
Alignment:
Q  61 tctttaagaaatttcgtgacgctgtccaaaatttatgcaaggtagactatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcgatt 160  Q
    |||||||||  ||| ||||| ||| ||||||||  | |||||||||||||||| || | || ||||| |||| |||||||||| ||||||||||||| ||    
T  13292 tctttaagacgtttggtgacactgcccaaaattgtt-caaggtagactatcaaccatggtgcctccaagatacaacaagttcaactacaactgtgcggtt 13390  T
Q  161 aacta 165  Q
    |||||    
T  13391 aacta 13395  T

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Target: scaffold2020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold2020
Description:

Target: scaffold2020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 157
Target Start/End: Original strand, 435 - 486
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcg 157  Q
    |||||||| ||||  | ||||||||||||||||| |||||||||||||||||    
T  435 actatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcg 486  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 165060 - 165009
Alignment:
Q  106 actatcaatcacgctgtctccaggataaaacaagttcagctacaactgtgcg 157  Q
    |||||||| ||||  | ||||||||||||||||| |||||||||||||||||    
T  165060 actatcaaccacgtcgcctccaggataaaacaagctcagctacaactgtgcg 165009  T

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