View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13978_low_41 (Length: 252)

Name: NF13978_low_41
Description: NF13978
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13978_low_41
NF13978_low_41
[»] chr2 (47 HSPs)
chr2 (93-252)||(2920515-2920675)
chr2 (39-174)||(2917617-2917752)
chr2 (1-134)||(24512141-24512274)
chr2 (1-133)||(41500200-41500332)
chr2 (34-175)||(45475373-45475514)
chr2 (34-134)||(19187222-19187322)
chr2 (32-134)||(34918426-34918528)
chr2 (1-107)||(43491110-43491216)
chr2 (32-133)||(25184827-25184927)
chr2 (34-175)||(34921758-34921898)
chr2 (1-48)||(2920482-2920529)
chr2 (1-80)||(39393065-39393144)
chr2 (35-173)||(8268749-8268887)
chr2 (1-47)||(29093794-29093840)
chr2 (35-133)||(35493341-35493439)
chr2 (32-133)||(82259-82359)
chr2 (34-111)||(12908428-12908505)
chr2 (54-174)||(23409520-23409640)
chr2 (34-122)||(34639313-34639401)
chr2 (82-174)||(45479841-45479933)
chr2 (54-133)||(1149447-1149526)
chr2 (32-131)||(43943666-43943765)
chr2 (53-171)||(41181374-41181492)
chr2 (1-46)||(40679563-40679608)
chr2 (1-133)||(2648092-2648224)
chr2 (24-111)||(17424128-17424216)
chr2 (67-114)||(12905543-12905590)
chr2 (56-171)||(28342460-28342575)
chr2 (55-133)||(1101072-1101150)
chr2 (32-114)||(3795331-3795413)
chr2 (1-83)||(10365758-10365840)
chr2 (32-114)||(40156393-40156475)
chr2 (67-172)||(19186683-19186788)
chr2 (15-111)||(34638138-34638233)
chr2 (32-111)||(24601636-24601715)
chr2 (32-111)||(24612399-24612478)
chr2 (32-115)||(29407884-29407967)
chr2 (57-123)||(41053690-41053756)
chr2 (35-133)||(45137433-45137531)
chr2 (53-130)||(2648776-2648853)
chr2 (17-46)||(26858175-26858204)
chr2 (32-133)||(27276371-27276472)
chr2 (24-81)||(43982226-43982283)
chr2 (78-138)||(23786094-23786154)
chr2 (54-110)||(36255732-36255788)
chr2 (32-84)||(41053565-41053617)
chr2 (98-134)||(43493320-43493356)
[»] chr5 (36 HSPs)
chr5 (1-133)||(18307229-18307361)
chr5 (1-177)||(20192284-20192460)
chr5 (34-174)||(18538334-18538474)
chr5 (54-174)||(34682191-34682311)
chr5 (14-171)||(3600273-3600431)
chr5 (35-177)||(3603148-3603290)
chr5 (35-171)||(20200148-20200284)
chr5 (1-111)||(542756-542866)
chr5 (33-133)||(34123933-34124033)
chr5 (33-138)||(38968065-38968170)
chr5 (35-176)||(25499887-25500030)
chr5 (39-178)||(1398534-1398673)
chr5 (67-174)||(35567059-35567166)
chr5 (1-99)||(25497520-25497618)
chr5 (8-76)||(11346039-11346107)
chr5 (67-171)||(18310053-18310157)
chr5 (67-175)||(19228678-19228786)
chr5 (34-133)||(33993255-33993354)
chr5 (32-114)||(33995145-33995227)
chr5 (32-138)||(34122494-34122600)
chr5 (1-47)||(42865770-42865816)
chr5 (53-174)||(24053114-24053235)
chr5 (39-104)||(30354400-30354465)
chr5 (33-140)||(8702196-8702303)
chr5 (1-48)||(35564321-35564368)
chr5 (32-114)||(17965843-17965925)
chr5 (37-171)||(42539375-42539509)
chr5 (32-133)||(17966883-17966984)
chr5 (24-81)||(19037459-19037516)
chr5 (32-133)||(41798793-41798894)
chr5 (68-133)||(42865811-42865876)
chr5 (32-111)||(30192489-30192568)
chr5 (14-48)||(8537225-8537259)
chr5 (35-121)||(28388519-28388605)
chr5 (32-76)||(7762241-7762285)
chr5 (28-111)||(30708899-30708983)
[»] chr8 (28 HSPs)
chr8 (1-171)||(18441407-18441577)
chr8 (1-178)||(41858089-41858264)
chr8 (14-173)||(42602395-42602554)
chr8 (35-171)||(18438571-18438707)
chr8 (1-73)||(26451515-26451587)
chr8 (34-170)||(41855306-41855442)
chr8 (54-174)||(7168022-7168142)
chr8 (35-126)||(42605234-42605325)
chr8 (34-172)||(22577601-22577739)
chr8 (33-133)||(1114718-1114818)
chr8 (33-112)||(34823014-34823093)
chr8 (32-138)||(35962277-35962383)
chr8 (82-175)||(3395825-3395918)
chr8 (67-115)||(4866427-4866475)
chr8 (34-133)||(18205761-18205860)
chr8 (1-47)||(3395927-3395973)
chr8 (32-114)||(21406261-21406343)
chr8 (32-114)||(21800753-21800835)
chr8 (1-47)||(22547504-22547550)
chr8 (1-47)||(38871834-38871880)
chr8 (54-138)||(7172606-7172690)
chr8 (94-134)||(28168658-28168698)
chr8 (57-133)||(45454381-45454457)
chr8 (1-48)||(41274652-41274699)
chr8 (32-114)||(21835176-21835258)
chr8 (33-171)||(40077248-40077386)
chr8 (2-47)||(37779713-37779758)
chr8 (32-112)||(7121783-7121863)
[»] chr4 (48 HSPs)
chr4 (1-174)||(958560-958732)
chr4 (1-174)||(29700268-29700441)
chr4 (1-174)||(44561296-44561469)
chr4 (1-133)||(56138222-56138359)
chr4 (35-173)||(37959720-37959858)
chr4 (67-174)||(4768612-4768719)
chr4 (35-174)||(51426471-51426610)
chr4 (55-175)||(21472504-21472624)
chr4 (39-177)||(38464770-38464907)
chr4 (1-111)||(1041932-1042042)
chr4 (32-178)||(4979914-4980060)
chr4 (31-133)||(9889969-9890071)
chr4 (35-133)||(11494519-11494616)
chr4 (54-180)||(49572919-49573045)
chr4 (1-46)||(4786300-4786345)
chr4 (32-114)||(15999796-15999878)
chr4 (1-47)||(34154394-34154440)
chr4 (1-47)||(34530761-34530807)
chr4 (1-47)||(39588127-39588173)
chr4 (1-47)||(51429295-51429341)
chr4 (24-111)||(55793916-55794004)
chr4 (35-174)||(955726-955865)
chr4 (67-174)||(34154434-34154541)
chr4 (1-47)||(243311-243357)
chr4 (55-133)||(1044539-1044617)
chr4 (1-47)||(6283433-6283479)
chr4 (32-114)||(15995716-15995798)
chr4 (32-114)||(18884501-18884583)
chr4 (32-114)||(19069181-19069263)
chr4 (1-47)||(56304911-56304957)
chr4 (24-81)||(6178099-6178156)
chr4 (24-81)||(41795345-41795402)
chr4 (24-81)||(49094111-49094168)
chr4 (67-115)||(17139618-17139665)
chr4 (34-134)||(21470877-21470977)
chr4 (8-76)||(28081490-28081558)
chr4 (32-123)||(16984158-16984249)
chr4 (67-106)||(24417448-24417487)
chr4 (32-171)||(44051089-44051228)
chr4 (32-111)||(48806482-48806561)
chr4 (56-123)||(50274745-50274812)
chr4 (52-134)||(18578623-18578705)
chr4 (67-133)||(37394223-37394289)
chr4 (18-47)||(37865203-37865232)
chr4 (1-47)||(42885510-42885558)
chr4 (34-91)||(48256567-48256624)
chr4 (39-123)||(6280842-6280926)
chr4 (33-109)||(41023385-41023461)
[»] chr3 (58 HSPs)
chr3 (1-133)||(41802973-41803105)
chr3 (34-179)||(29929355-29929500)
chr3 (34-179)||(29978509-29978654)
chr3 (1-174)||(45101814-45101987)
chr3 (34-173)||(28611099-28611238)
chr3 (1-114)||(34694400-34694513)
chr3 (1-133)||(51402364-51402496)
chr3 (1-121)||(55207629-55207749)
chr3 (1-171)||(41577012-41577182)
chr3 (1-123)||(55385122-55385244)
chr3 (34-179)||(29918340-29918485)
chr3 (34-179)||(29967493-29967638)
chr3 (35-176)||(41579724-41579865)
chr3 (1-133)||(13896842-13896974)
chr3 (34-138)||(42756129-42756233)
chr3 (1-131)||(52570532-52570661)
chr3 (35-176)||(2432943-2433084)
chr3 (1-133)||(41137693-41137815)
chr3 (38-178)||(30256006-30256146)
chr3 (54-134)||(46344911-46344991)
chr3 (1-80)||(24703381-24703460)
chr3 (1-123)||(43476176-43476299)
chr3 (67-174)||(43571717-43571824)
chr3 (32-113)||(34691620-34691701)
chr3 (1-106)||(46347687-46347791)
chr3 (39-131)||(7247864-7247956)
chr3 (8-76)||(36134355-36134423)
chr3 (1-121)||(49609370-49609490)
chr3 (2-113)||(49219758-49219869)
chr3 (1-48)||(51696540-51696587)
chr3 (1-47)||(19454317-19454363)
chr3 (35-133)||(49268845-49268943)
chr3 (8-81)||(4004776-4004849)
chr3 (54-171)||(41805694-41805811)
chr3 (67-123)||(7839531-7839587)
chr3 (93-173)||(42807658-42807738)
chr3 (33-133)||(49196447-49196547)
chr3 (8-47)||(2271286-2271325)
chr3 (29-111)||(2647693-2647776)
chr3 (32-111)||(32593109-32593188)
chr3 (32-114)||(2743392-2743474)
chr3 (35-113)||(19440251-19440329)
chr3 (37-178)||(48888671-48888811)
chr3 (24-81)||(49140836-49140893)
chr3 (1-45)||(7245155-7245199)
chr3 (32-123)||(600541-600632)
chr3 (32-123)||(19341591-19341682)
chr3 (32-111)||(24700718-24700797)
chr3 (1-48)||(43568926-43568973)
chr3 (32-122)||(48246398-48246488)
chr3 (36-133)||(11380416-11380513)
chr3 (24-81)||(34049107-34049164)
chr3 (38-123)||(46989532-46989617)
chr3 (34-123)||(48250868-48250957)
chr3 (34-171)||(52567700-52567837)
chr3 (24-81)||(54389822-54389879)
chr3 (35-107)||(9582548-9582620)
chr3 (54-114)||(13743287-13743347)
[»] chr7 (33 HSPs)
chr7 (1-171)||(30355205-30355375)
chr7 (3-171)||(46863312-46863480)
chr7 (33-174)||(9494804-9494945)
chr7 (1-171)||(28980138-28980309)
chr7 (1-171)||(41047715-41047884)
chr7 (15-171)||(42681931-42682087)
chr7 (38-177)||(36392056-36392195)
chr7 (33-179)||(37340231-37340377)
chr7 (1-76)||(40587693-40587768)
chr7 (67-138)||(45361619-45361690)
chr7 (34-171)||(47060864-47061000)
chr7 (94-176)||(10225902-10225985)
chr7 (67-134)||(46860485-46860552)
chr7 (1-47)||(21188392-21188438)
chr7 (1-63)||(36394904-36394966)
chr7 (32-133)||(47776307-47776408)
chr7 (67-171)||(48314611-48314714)
chr7 (8-63)||(17838695-17838750)
chr7 (32-179)||(19044223-19044369)
chr7 (32-179)||(20710267-20710413)
chr7 (54-176)||(10705180-10705302)
chr7 (56-138)||(27453615-27453697)
chr7 (54-171)||(41049208-41049324)
chr7 (1-42)||(45364186-45364227)
chr7 (1-47)||(34139932-34139978)
chr7 (90-134)||(42684218-42684262)
chr7 (56-171)||(34622436-34622551)
chr7 (53-174)||(36186491-36186611)
chr7 (24-81)||(9367713-9367770)
chr7 (90-131)||(40590546-40590587)
chr7 (98-171)||(48269618-48269690)
chr7 (98-166)||(10708333-10708401)
chr7 (32-76)||(20353927-20353971)
[»] chr6 (31 HSPs)
chr6 (1-134)||(12783923-12784056)
chr6 (1-129)||(13401465-13401593)
chr6 (67-174)||(13479660-13479767)
chr6 (31-176)||(18001146-18001290)
chr6 (34-131)||(23958867-23958964)
chr6 (34-130)||(16192747-16192843)
chr6 (67-134)||(23986013-23986080)
chr6 (1-47)||(29061331-29061377)
chr6 (32-122)||(31768739-31768829)
chr6 (35-171)||(13404632-13404768)
chr6 (32-108)||(31146373-31146449)
chr6 (32-114)||(13388705-13388787)
chr6 (32-163)||(2050974-2051104)
chr6 (37-174)||(32643523-32643660)
chr6 (67-123)||(7537183-7537239)
chr6 (24-111)||(22305104-22305192)
chr6 (53-171)||(29286166-29286284)
chr6 (1-47)||(32034358-32034404)
chr6 (24-81)||(6204854-6204911)
chr6 (24-81)||(11691821-11691878)
chr6 (32-108)||(8193206-8193282)
chr6 (32-108)||(28362728-28362804)
chr6 (1-45)||(29065791-29065835)
chr6 (1-45)||(29074804-29074848)
chr6 (1-45)||(29079568-29079612)
chr6 (1-45)||(29107377-29107421)
chr6 (117-176)||(32026037-32026096)
chr6 (102-176)||(2405438-2405512)
chr6 (78-131)||(6320532-6320585)
chr6 (32-73)||(11157771-11157812)
chr6 (32-76)||(11840247-11840291)
[»] chr1 (54 HSPs)
chr1 (1-171)||(13972001-13972169)
chr1 (34-174)||(29261349-29261488)
chr1 (35-171)||(46141719-46141855)
chr1 (34-174)||(46973138-46973277)
chr1 (54-179)||(13173765-13173889)
chr1 (34-133)||(13178131-13178230)
chr1 (39-174)||(41804037-41804172)
chr1 (35-171)||(18975120-18975256)
chr1 (67-174)||(19053993-19054100)
chr1 (1-114)||(42572723-42572836)
chr1 (38-133)||(23276111-23276206)
chr1 (1-48)||(29763185-29763232)
chr1 (1-48)||(49395663-49395710)
chr1 (1-47)||(27487632-27487678)
chr1 (68-174)||(35521548-35521654)
chr1 (1-171)||(49927467-49927649)
chr1 (1-61)||(6434795-6434855)
chr1 (33-133)||(11183161-11183261)
chr1 (34-174)||(21944379-21944519)
chr1 (35-173)||(26633465-26633600)
chr1 (67-174)||(36908512-36908619)
chr1 (35-178)||(49924786-49924929)
chr1 (1-47)||(14174877-14174923)
chr1 (54-164)||(25040095-25040205)
chr1 (33-111)||(35258870-35258948)
chr1 (32-133)||(6562158-6562259)
chr1 (38-174)||(19499115-19499249)
chr1 (24-111)||(13636111-13636199)
chr1 (24-111)||(19159619-19159707)
chr1 (35-175)||(36072303-36072442)
chr1 (1-76)||(13147528-13147603)
chr1 (34-177)||(36076557-36076699)
chr1 (35-122)||(52802116-52802203)
chr1 (67-133)||(27485034-27485100)
chr1 (3-133)||(29709279-29709408)
chr1 (91-173)||(42570077-42570159)
chr1 (32-114)||(44470008-44470090)
chr1 (1-38)||(26637222-26637259)
chr1 (32-133)||(48751407-48751508)
chr1 (8-45)||(49426750-49426787)
chr1 (32-116)||(15047274-15047358)
chr1 (35-123)||(29438020-29438108)
chr1 (54-114)||(30910022-30910082)
chr1 (32-174)||(38689866-38690007)
chr1 (34-108)||(44336249-44336323)
chr1 (35-133)||(51289960-51290058)
chr1 (32-113)||(3941147-3941228)
chr1 (32-133)||(9711648-9711749)
chr1 (32-121)||(23359346-23359435)
chr1 (1-38)||(36908640-36908677)
chr1 (34-114)||(6557909-6557989)
chr1 (106-174)||(14172048-14172116)
chr1 (32-108)||(45943723-45943799)
chr1 (61-109)||(51337539-51337587)
[»] scaffold0192 (2 HSPs)
scaffold0192 (80-175)||(16345-16439)
scaffold0192 (5-48)||(18869-18912)
[»] scaffold1379 (1 HSPs)
scaffold1379 (32-179)||(431-578)
[»] scaffold0199 (1 HSPs)
scaffold0199 (8-81)||(12361-12434)
[»] scaffold0618 (1 HSPs)
scaffold0618 (54-134)||(3860-3939)
[»] scaffold0092 (1 HSPs)
scaffold0092 (32-115)||(54558-54641)
[»] scaffold0341 (1 HSPs)
scaffold0341 (32-133)||(17348-17449)
[»] scaffold0116 (1 HSPs)
scaffold0116 (32-120)||(15952-16040)
[»] scaffold0176 (1 HSPs)
scaffold0176 (1-47)||(857-903)
[»] scaffold0101 (1 HSPs)
scaffold0101 (24-111)||(36523-36611)
[»] scaffold0388 (1 HSPs)
scaffold0388 (67-174)||(11742-11849)
[»] scaffold0219 (2 HSPs)
scaffold0219 (57-107)||(15704-15754)
scaffold0219 (32-108)||(20109-20185)
[»] scaffold0012 (1 HSPs)
scaffold0012 (56-114)||(232542-232600)
[»] scaffold0494 (1 HSPs)
scaffold0494 (32-133)||(806-907)
[»] scaffold0361 (1 HSPs)
scaffold0361 (32-133)||(4397-4498)
[»] scaffold0201 (1 HSPs)
scaffold0201 (32-121)||(22390-22479)
[»] scaffold0360 (1 HSPs)
scaffold0360 (34-138)||(7303-7407)


Alignment Details
Target: chr2 (Bit Score: 105; Significance: 1e-52; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 93 - 252
Target Start/End: Original strand, 2920515 - 2920675
Alignment:
Q  93 ctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaattaatagagt-gg 191  Q
    |||| ||||||||| ||||||  |||||| |||||||||||||||||||||  |||||| ||| |||||||||| |||||||| ||||||||||||| ||    
T  2920515 ctcggcagttaactaccgaggttgcaaaatcatattttacttatgtacatcaatcttattaaatgtgtcaacaagaattttcagaaattaatagagtggg 2920614  T
Q  192 gggaaaaatgagtcattcccatcaccctcctccacacaaaggtaacagataagtccctcga 252  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2920615 gggaaaactgagtcattcccatcaccctcctccacacaaaggtaacagataagtccctcga 2920675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 39 - 174
Target Start/End: Complemental strand, 2917752 - 2917617
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    |||||||||| ||| |||||||||| | |||||||| | ||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||| |||    
T  2917752 cagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgt 2917653  T
Q  139 acatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
     | || | ||||||||| ||||||||||||||||||    
T  2917652 gcctcagccttatgaaatgtgtcaacaacaattttc 2917617  T

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Target: chr2; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 24512274 - 24512141
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||  ||| |  ||||||||| | ||||||| |||| ||| ||||    
T  24512274 agagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaacag 24512175  T
Q  101 ttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||| |||||| | |||||| ||||||||||    
T  24512174 ttaactgtcgagggggtaaaaacgtattttactt 24512141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 41500200 - 41500332
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||  || ||||| |||| | |||||||||| |||| |||| ||||  | || ||    
T  41500200 agagagcttatgccagatttgtagcagaagatcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgatag 41500299  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||| |||||| | |||||||||    
T  41500300 ttaactgccgagggggcaaaagcgtattttact 41500332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 34 - 175
Target Start/End: Complemental strand, 45475514 - 45475373
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||| |||||||||  || |||||||||| | |||||||| | ||||||||| ||||||||| ||||||||||||||||| |||||| | |||||||||    
T  45475514 ctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttact 45475415  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttca 175  Q
    | |||   || | ||||||||| ||||||||| |||||||||    
T  45475414 tgtgtgtctcagccttatgaaatgtgtcaacatcaattttca 45475373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 134
Target Start/End: Original strand, 19187222 - 19187322
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||| | | |||||||| | || |||| ||||||||| ||||||||||||||||| |||||||| |||||||||    
T  19187222 ctcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttact 19187321  T
Q  134 t 134  Q
    |    
T  19187322 t 19187322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 32 - 134
Target Start/End: Complemental strand, 34918528 - 34918426
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||| ||||||||||||  |||||||||||||| ||||| | || |||||||||||||| ||| | ||||||||| |||||| |||||||| |||| ||    
T  34918528 tcctcagcagttaactatcaatgttttcctcgacagttaattacagccggtttttcaattactcaatagttaactgacgagggggcaaaaacgtattgta 34918429  T
Q  132 ctt 134  Q
    |||    
T  34918428 ctt 34918426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 43491216 - 43491110
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||| || |||||||| |||||||||||||||   | |||||||||||| ||||| |||| |||||| || |||| |||| |||    
T  43491216 agagagcttctgccagatttataacagaagattctcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcag 43491117  T
Q  101 ttaactg 107  Q
    |||||||    
T  43491116 ttaactg 43491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 25184827 - 25184927
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || |||||||||| | |||||||||| |||||||   |||| |||||||||||||||| ||||| |||||||| |||||||    
T  25184827 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttca-aattcctcgacagttaactgctgagggggcaaaaacgtatttta 25184925  T
Q  132 ct 133  Q
    ||    
T  25184926 ct 25184927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 175
Target Start/End: Original strand, 34921758 - 34921898
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||  | |||||||||| ||||||||| ||||||||| ||||||||| ||| ||| |||||||| |||||||||    
T  34921758 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttact 34921856  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttca 175  Q
      |||   || | ||||||||| ||||||| | |||||||||    
T  34921857 cgtgtttctctgccttatgaaatgtgtcaatagcaattttca 34921898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 2920482 - 2920529
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  2920482 agagagcttctgccagatttgtagcagaagatcctcggcagttaacta 2920529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 39393144 - 39393065
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 80  Q
    |||||||||||| ||||||||||| |||||||||||| ||||||||||  || ||||| |||||| ||||||| ||||||    
T  39393144 agagagcttctatcagatttgtagtagaagatcctcgacagttaactaccgaggtttttctcgacagttaactacatccg 39393065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 173
Target Start/End: Original strand, 8268749 - 8268887
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||||||   || ||||| |||||  ||||| |||| ||| |||||  ||| ||  ||||||||||||||||||  ||||| | |||||||||     
T  8268749 tcggcagttaactgccgaggtttttctcgatagttaattgcagccgatttttgcattccttaacagttaactgccgaggggacaaaatcgtattttacta 8268848  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
    |||||| || ||||||| ||| |||||||||||||||||    
T  8268849 atgtacgtcagtcttataaaatgtgtcaacaacaatttt 8268887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29093794 - 29093840
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  29093794 agagagcttctgccagatttgtagcagaagatcctcggcagttaact 29093840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 35493341 - 35493439
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||||||||  ||| ||||||||| | |||||||||| | ||||||| |||| |||| ||||||||| ||||||| |||||| | |||||||||    
T  35493341 tcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttact 35493439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 82259 - 82359
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||| |||||||||||  || |||||||||||| |||||||||| |||| |||  |||| |||||||||||||| |||||| | ||||||| |||||||    
T  82259 tcctcagcagttaactacggaggttttcctcgacagttaactgcagccgg-tttcaaattactcgacagttaactaccgaggaaacaaaaacgtatttta 82357  T
Q  132 ct 133  Q
    ||    
T  82358 ct 82359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 34 - 111
Target Start/End: Original strand, 12908428 - 12908505
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||  | |||||||||| | |||||||||| ||  ||||| ||||||||||||||||||||||||    
T  12908428 ctcggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactgccga 12908505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 174
Target Start/End: Original strand, 23409520 - 23409640
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| | |||||||||| || |||||| |||| |||| || |||||||||||| | |||||  | |||||||||  ||| |||| | ||||||     
T  23409520 gttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccgagagggcaaacgcgtattttactagtgtgcatcagccttatgt 23409619  T
Q  154 aacgtgtcaacaacaattttc 174  Q
    |||||||| ||||||||||||    
T  23409620 aacgtgtccacaacaattttc 23409640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 122
Target Start/End: Original strand, 34639313 - 34639401
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 122  Q
    ||||||||||||||   ||||||||||||  | |||||||||| |||| |||| ||||||||| |||||| |||||||||| |||||||    
T  34639313 ctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaa 34639401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 174
Target Start/End: Original strand, 45479841 - 45479933
Alignment:
Q  82 tttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    ||||| ||||||||| ||||||||||||||| |||||||| | ||||||||| ||||   |  | ||||||||| ||||||||||||||||||    
T  45479841 ttttttaatttctcggcagttaactgccgagagagcaaaatcgtattttactcatgtttctgagccttatgaaatgtgtcaacaacaattttc 45479933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 1149526 - 1149447
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||| ||||||||||  ||| |||  |||| |||| |||||||||||||||||||||||| | |||||||||    
T  1149526 gttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttact 1149447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 131
Target Start/End: Complemental strand, 43943765 - 43943666
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  ||  ||||||||||| |||||||||| |||||| || |||| ||||| |||||||||| ||||| | |||| | |||||||    
T  43943765 tcctcggcagttaactaccgagtttttcctcgacagttaactgcagccggttattaaattcctcgagagttaactgctgagggggaaaaatcgtatttta 43943666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 41181492 - 41181374
Alignment:
Q  53 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg 152  Q
    ||||||||||| | ||||| || | |||||| || |||| |||| ||||||||||||||||| |||||||| |||||||||  ||| | || | ||||||    
T  41181492 tgttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcctcagccttatg 41181393  T
Q  153 aaacgtgtcaacaacaatt 171  Q
     || ||||||||| |||||    
T  41181392 caatgtgtcaacatcaatt 41181374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40679563 - 40679608
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaac 46  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  40679563 agagaggttcttccagatttgtagcagaagatcctcggcagttaac 40679608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 2648224 - 2648092
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||||| |||| ||||||||||||||||||||| |||||| |||||||  ||  ||||||||| | ||||||| ||| | ||| || |||| |||||||     
T  2648224 agagagtttctgccagatttgtagcagaagatcatcggcaattaactaccgagattttcctcggcagttaactacatacagttattgaattcctcgacaa 2648125  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
     |||||| ||||   | |||||| |||||||||    
T  2648124 gtaactgtcgagacggaaaaaacgtattttact 2648092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 17424216 - 17424128
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| |||| |||| |||  | ||| ||||||||||||||    
T  17424216 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccga 17424128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 114
Target Start/End: Complemental strand, 12905590 - 12905543
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||| ||| ||||||||||||||| |||||||||||||||||    
T  12905590 gttaactgcagccgatttttcaatttctcggcagttaactgccgaggg 12905543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 28342575 - 28342460
Alignment:
Q  56 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaa 155  Q
    |||||||| | ||||| |||| ||||||||| ||||  |||||||||||||||||| || |||||||| ||  ||||||||||   |  | |||||| ||    
T  28342575 tttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaattacttatgtgtcttagccttatgcaa 28342476  T
Q  156 cgtgtcaacaacaatt 171  Q
     |||||||||||||||    
T  28342475 tgtgtcaacaacaatt 28342460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 1101072 - 1101150
Alignment:
Q  55 ttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||| | ||||||| || |||| |||  ||||  ||| |||||||||||||||||||||||| |||||||||||    
T  1101072 ttttcctcggcagttaactacagccggatttcaaattcatcggcagttaactgccgagggagcaaaatcatattttact 1101150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 3795413 - 3795331
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||||||||||    | |||||||||| | |||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  3795413 tcctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgaggg 3795331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 10365758 - 10365840
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtt 83  Q
    ||||||||| | |||||||||||||| ||||||||||||| |||||||   | |||||||||| | ||||||| || ||||||    
T  10365758 agagagcttatgccagatttgtagcaaaagatcctcggcatttaactaccaaggttttcctcggcagttaactacagccggtt 10365840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 40156475 - 40156393
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||| | || |||||||||| | |||||||||| ||||||||||||  | ||| || ||||||| ||||||    
T  40156475 tcctcggcagttaactgtcgaagttttcctcgtcagttaactgcagccggtttttcaaaatttcggcaattaactgtcgaggg 40156393  T

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Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 67 - 172
Target Start/End: Complemental strand, 19186788 - 19186683
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| ||| ||||| |||| |||| ||||| |||||||| || | |||||| |||||||||| |||   || | ||||||| | ||||||||||    
T  19186788 gttaactgcagccgctttttgaattgctcggcagtttactgccgatggggtaaaaacgtattttacttgtgtgtctcagccttatgatatgtgtcaacaa 19186689  T
Q  167 caattt 172  Q
    ||||||    
T  19186688 caattt 19186683  T

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Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 34638233 - 34638138
Alignment:
Q  15 agatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||||||||| || |||||||  || |||||||||| | |||||||| | |||  |||  |||| |||| ||||||||||||||    
T  34638233 agatttgtagcagaagatcctcgacaattaactaccgaagttttcctcggcagttaactg-aaccgaatttctaattcctcggcagttaactgccga 34638138  T

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Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 24601715 - 24601636
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||||||  || | ||||||||   |||||||||| || |||||| |||| |||||||||||||| ||||    
T  24601715 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24601636  T

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Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 24612399 - 24612478
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||||||  || | ||||||||   |||||||||| || |||||| |||| |||||||||||||| ||||    
T  24612399 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccga 24612478  T

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Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 115
Target Start/End: Original strand, 29407884 - 29407967
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 115  Q
    ||||||||||||||||   || ||||||||||   |||||||||| |||||| || ||  | ||||||||||||||||||||||    
T  29407884 tcctcggcagttaactgccgaagttttcctcgttagttaactgcagccggttctttaaaatttcgacagttaactgccgaggga 29407967  T

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Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 41053690 - 41053756
Alignment:
Q  57 ttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    ||||||| | |||||||||| ||||||| | ||||||| |||||||||||| |||||  ||||||||    
T  41053690 ttcctcgccagttaactgcagccggtttcttaatttctggacagttaactgtcgaggaggcaaaaac 41053756  T

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Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 45137433 - 45137531
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||||||||| || |||||| ||| | |||||||||| |||  |||| |||| |||| || ||||||||| |||  |||||| | |||||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttact 45137531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 53 - 130
Target Start/End: Complemental strand, 2648853 - 2648776
Alignment:
Q  53 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 130  Q
    |||||||||||   |||||||||| ||||||||| |||| || | ||||||||||||||| | |||||| | ||||||    
T  2648853 tgttttcctcggtagttaactgcagccggtttttgaattccttggcagttaactgccgagagggcaaaagcgtatttt 2648776  T

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Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 17 - 46
Target Start/End: Complemental strand, 26858204 - 26858175
Alignment:
Q  17 atttgtagcagaagatcctcggcagttaac 46  Q
    ||||||||||||||||||||||||||||||    
T  26858204 atttgtagcagaagatcctcggcagttaac 26858175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 27276371 - 27276472
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||||||| ||||||   || |||||||||| | |||||||||| |||| |||  |||| |||  ||||||||||||||||| | |||| | |||||||    
T  27276371 tcctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtatttta 27276470  T
Q  132 ct 133  Q
    ||    
T  27276471 ct 27276472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 43982283 - 43982226
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    ||||||| |||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  43982283 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 43982226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 138
Target Start/End: Complemental strand, 23786154 - 23786094
Alignment:
Q  78 ccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    |||| |||| |||| |||| |||||||||||||||||  ||||| ||||||||||| ||||    
T  23786154 ccggatttttaattcctcggcagttaactgccgaggggacaaaatcatattttactaatgt 23786094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 110
Target Start/End: Original strand, 36255732 - 36255788
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccg 110  Q
    |||||||||| | |||||||||| |||  |||| |||| ||||||||||||||||||    
T  36255732 gttttcctcggcagttaactgcaaccgtgtttttaattcctcgacagttaactgccg 36255788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 41053565 - 41053617
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt 84  Q
    |||||||||||||||||  |||| |||||||| | |||||||||| |||||||    
T  41053565 tcctcggcagttaactaccgatgatttcctcgccagttaactgcagccggttt 41053617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 134
Target Start/End: Original strand, 43493320 - 43493356
Alignment:
Q  98 cagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||||| |||||||| ||||||||||    
T  43493320 cagttaactgccgagggggcaaaaacgtattttactt 43493356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 77; Significance: 8e-36; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 18307361 - 18307229
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||| |||||| ||||||||||||||||||||||||||||||||||||  || |||||||||| | ||||||| || ||| ||||| |||| ||||||||    
T  18307361 agagggcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacag 18307262  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||||| ||||||||||| |||||||||    
T  18307261 ttaactgccgaaggagcaaaaacgtattttact 18307229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 177
Target Start/End: Complemental strand, 20192460 - 20192284
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||| || |||||||||| | |||||||||| ||| || || ||||  ||  |||    
T  20192460 agagagcttctgccagatttgtagcagaagatcctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcag 20192361  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaa 177  Q
    ||||||| ||| || |||||| | |||||||||| ||| | || | ||||||||| ||||||||||||||| |||||    
T  20192360 ttaactgacgaaggggcaaaatcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattctcaaa 20192284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 174
Target Start/End: Original strand, 18538334 - 18538474
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||| | |||||||||| ||||||||| |||| ||||||| |||||||||||||| |||||| | |||||||||    
T  18538334 ctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttact 18538433  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    | ||| | || | || |||||| ||||||||||||||||||    
T  18538434 tgtgtgcctcagcctaatgaaatgtgtcaacaacaattttc 18538474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 34682311 - 34682191
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| | |||||||||| ||||||||| |||| ||||||||||||||| | ||||||||||| | |||||||||| || || || | |||||||    
T  34682311 gttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactgtcaagggagcaaaagcgtattttacttgtgaacctcagccttatga 34682212  T
Q  154 aacgtgtcaacaacaattttc 174  Q
    || ||||||||||||||||||    
T  34682211 aatgtgtcaacaacaattttc 34682191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 14 - 171
Target Start/End: Complemental strand, 3600431 - 3600273
Alignment:
Q  14 cagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtt-tttcaatttctcgacagttaactgccgag 112  Q
    |||||||||||||||||||||||||| ||||||||| || |||||||| | | |||||||||| | |||| ||  ||||  ||| |||||||||||||||    
T  3600431 cagatttgtagcagaagatcctcggctgttaactatcgaggttttccttggcagttaactgcagctggttattataattattcggcagttaactgccgag 3600332  T
Q  113 ggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    || ||||||||||||||||||| |||   ||    |||||||| |||||||||||||||    
T  3600331 ggggcaaaaacatattttacttgtgtggctcaactttatgaaatgtgtcaacaacaatt 3600273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 177
Target Start/End: Original strand, 3603148 - 3603290
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  || ||||||||||   |||||||||| || ||| || ||||  ||| |||||||||| ||||||||||||||| ||||||||||    
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgtattttactt 3603247  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaaa 177  Q
    |||| | || | |||||| || ||||||||||||||| |||||    
T  3603248 atgtgcctcagccttatgcaatgtgtcaacaacaattctcaaa 3603290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 20200148 - 20200284
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  ||||||||||||| | ||||||||||   |||| || ||||||| |||||||||||||||| || |||||||| ||||||| ||    
T  20200148 tcggcagttaactacagatgttttcctcggcagttaactgcagttggttattgaatttcttgacagttaactgccgatggggcaaaaacgtattttattt 20200247  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
     ||| | || | |||||| || |||||||||||||||    
T  20200248 gtgtgcctcagccttatgcaatgtgtcaacaacaatt 20200284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 542756 - 542866
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||  ||   |||||||| | |||| ||||| |||| |||  |||| ||||||||    
T  542756 agagaacttctgccagatttgtagcagaagatcctcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacag 542855  T
Q  101 ttaactgccga 111  Q
    |||||||||||    
T  542856 ttaactgccga 542866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 34123933 - 34124033
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||||||||||||||  || |||||||| | | |||||||||| |||| |||  ||||||||||||||||||||||||||| |||||| | ||||||||    
T  34123933 cctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttac 34124032  T
Q  133 t 133  Q
    |    
T  34124033 t 34124033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 33 - 138
Target Start/End: Complemental strand, 38968170 - 38968065
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||||||||||||||| || |||||||||| | |||||||||| |||| ||||  ||| ||||  |||||||| |||| ||| ||||||| ||||||||    
T  38968170 cctcggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagttaactaccgaaggatcaaaaacgtattttac 38968071  T
Q  133 ttatgt 138  Q
    ||||||    
T  38968070 ttatgt 38968065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 25499887 - 25500030
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||| ||||||| | | |||||||||| | |||||| ||| ||||||||| |||| ||||| |||||||||||||||| |||||| | ||||||||||    
T  25499887 tcggcacttaactactaaggttttcctcggcagttaaccgcaaccggtttttgaattcctcgatagttaactgccgagggggcaaaagcgtattttactt 25499986  T
Q  135 atgt--acatcggtcttatgaaacgtgtcaacaacaattttcaa 176  Q
     |||   | || | |||||| || ||||||||| ||||||||||    
T  25499987 gtgttcgcctcagccttatgtaatgtgtcaacaccaattttcaa 25500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 39 - 178
Target Start/End: Complemental strand, 1398673 - 1398534
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    ||||||||||  || |||||||| | |||||||||||| |||||| || |||| |||| |||||||||| ||| |||||||||   |||||||||| |||    
T  1398673 cagttaactaccgaggttttccttggctgttaactgcaaccggttattgaattcctcggcagttaactgtcgaaggagcaaaagtgtattttacttctgt 1398574  T
Q  139 acatcggtcttatgaaacgtgtcaacaacaattttcaaaa 178  Q
       ||   |||||| || ||||||||||||||||||||||    
T  1398573 gtctcaaccttatgtaatgtgtcaacaacaattttcaaaa 1398534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 35567059 - 35567166
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| ||||| ||   ||| |||||||||||||||||||| ||||||||||||||||||||| ||| | || | || |||||| ||||||||      
T  35567059 gttaactgcaaccggtattaacattcctcgacagttaactgccgagagagcaaaaacatattttacttgtgtgcctcagcctgatgaaatgtgtcaacgg 35567158  T
Q  167 caattttc 174  Q
    ||||||||    
T  35567159 caattttc 35567166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 25497618 - 25497520
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgaca 99  Q
    ||||||||||| || ||||||||||||||||| |||||||||||||||  ||  ||||||||| | |||||||||| ||  ||||| |||| |||||||    
T  25497618 agagagcttctgcctgatttgtagcagaagattctcggcagttaactaccgagattttcctcggcagttaactgcagccaatttttgaattcctcgaca 25497520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 11346107 - 11346039
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    |||| ||||||||||||||||||||||||| ||||||||||  || |||||||||| | ||||||||||    
T  11346107 ttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgca 11346039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 171
Target Start/End: Original strand, 18310053 - 18310157
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    ||||||||||  ||||| || |||| |||||||||||||||| ||||  |||||||| |||||||||| ||| | || | |||||| || ||||||||||    
T  18310053 gttaactgcagtcggttattgaattcctcgacagttaactgctgaggaggcaaaaacgtattttacttgtgtgcctcagccttatgcaatgtgtcaacaa 18310152  T
Q  167 caatt 171  Q
    |||||    
T  18310153 caatt 18310157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 175
Target Start/End: Original strand, 19228678 - 19228786
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||||||||||||| ||||  ||| ||||||||||||||||| |||   || |||||||||| |||   || | ||||| ||| ||||||||||    
T  19228678 gttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtgtcaacaa 19228777  T
Q  167 caattttca 175  Q
    |||||||||    
T  19228778 caattttca 19228786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 33993354 - 33993255
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || ||||| | || | ||||||| || ||||||||| ||||| ||| ||||||||| ||||||| |||||||| |||||||||    
T  33993354 ctcggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttact 33993255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 33995145 - 33995227
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||||||||||   || |||||||||| | ||||| |||||||| ||||| ||||||||| |||||||||| ||||||    
T  33995145 tcctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggg 33995227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 34122600 - 34122494
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  ||  ||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||| || |||||| | |||||||    
T  34122600 tcctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtatttta 34122501  T
Q  132 cttatgt 138  Q
    || ||||    
T  34122500 ctaatgt 34122494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42865770 - 42865816
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||    
T  42865770 agagagcttctgccagatttgtagcagaagatcctcggcaattaact 42865816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 53 - 174
Target Start/End: Complemental strand, 24053235 - 24053114
Alignment:
Q  53 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg 152  Q
    |||||| |||| | ||||||||||  |||||||| |||| |||| || |||||||||||| || ||||||| ||||||| ||||||   |||  |||||     
T  24053235 tgtttttctcggcagttaactgcagacggtttttgaattactcggcatttaactgccgagagaacaaaaacgtattttatttatgtgtctcgaccttatc 24053136  T
Q  153 aaacgtgtcaacaacaattttc 174  Q
    | | ||||||||||||||||||    
T  24053135 atatgtgtcaacaacaattttc 24053114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Original strand, 30354400 - 30354465
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaa 104  Q
    ||||||||||  || |||||||||||| |||||||||| || |||||| |||||||||||||||||    
T  30354400 cagttaactaccgaggttttcctcgacagttaactgcaaccagtttttgaatttctcgacagttaa 30354465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 140
Target Start/End: Original strand, 8702196 - 8702303
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||| ||||||||||  || |||||||||  | ||||||||||  | | |||| |||| |||| |||||||||| ||||||||||||| | ||||||||    
T  8702196 cctcgtcagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactgtcgagggagcaaaatcgtattttac 8702295  T
Q  133 ttatgtac 140  Q
    || |||||    
T  8702296 ttgtgtac 8702303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 35564368 - 35564321
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||||| | |||||||||||||||||||||||| |||||||||||    
T  35564368 agagagcttatgccagatttgtagcagaagatcctcagcagttaacta 35564321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 17965925 - 17965843
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||| |||||||  ||||||||||||| | ||||||||||  ||  |||| |||| ||||||| ||||||||||||||    
T  17965925 tcctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggg 17965843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 37 - 171
Target Start/End: Original strand, 42539375 - 42539509
Alignment:
Q  37 ggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttat 136  Q
    ||||||||||||   | |||||||||| | |||||||||| |||  |||| |||||||||||||||| || || | || |||||||| ||||||||| ||    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttctcgacagttagctacctaaggggcaaaaacgtattttactcat 42539474  T
Q  137 gtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    ||  ||| |||| |  ||| ||||||||| |||||    
T  42539475 gtgtatcagtctaaccaaatgtgtcaacatcaatt 42539509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 17966883 - 17966984
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||| |||||||||||  ||  |||||||||   ||||||||||  ||| |||| ||||||||| ||||||||||||||||| | |||| | |||||||    
T  17966883 tcctcagcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtatttta 17966982  T
Q  132 ct 133  Q
    ||    
T  17966983 ct 17966984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 19037459 - 19037516
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  19037459 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 19037516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 41798894 - 41798793
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||| ||||||  || |||||| ||| | |||||||||| |||| |||  ||||  ||  ||||||||||||||||| |||||| |||||||||    
T  41798894 tcctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatatttta 41798795  T
Q  132 ct 133  Q
    ||    
T  41798794 ct 41798793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 133
Target Start/End: Original strand, 42865811 - 42865876
Alignment:
Q  68 ttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||| ||||||||| ||||  ||| | ||||||||||||||||| |||||| |||||||||    
T  42865811 ttaactgcaaccggtttttgaattcttcgtcggttaactgccgagggagaaaaaacttattttact 42865876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 30192568 - 30192489
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||   || |||||||||||| |||||||||| |||||| || ||  | ||| ||||||||||||||    
T  30192568 tcctcggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccga 30192489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 14 - 48
Target Start/End: Complemental strand, 8537259 - 8537225
Alignment:
Q  14 cagatttgtagcagaagatcctcggcagttaacta 48  Q
    |||||||||||||||| ||||||||||||||||||    
T  8537259 cagatttgtagcagaacatcctcggcagttaacta 8537225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 121
Target Start/End: Original strand, 28388519 - 28388605
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaa 121  Q
    ||||||||||||||  || |||||||||| | |||||||||| | || |||  |||| |||| ||| ||||||||||||| ||||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaa 28388605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 7762241 - 7762285
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    ||||||||||||||||  ||| |||||||||||| ||||||||||    
T  7762241 tcctcggcagttaactcctgaggttttcctcgacagttaactgca 7762285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 28 - 111
Target Start/End: Complemental strand, 30708983 - 30708899
Alignment:
Q  28 aagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||||||   || |||| ||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  30708983 aagatcctcggcagttaactcccgaggtttccctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 30708899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 1e-34; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 18441407 - 18441577
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||||| |||| |||||||||||||||||||||||||||||||||||   || ||||| |||| | ||||||| ||  ||||| || ||||||||| |||    
T  18441407 agagagtttctgccagatttgtagcagaagatcctcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcag 18441506  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    |||||||||||||| |||||||| |||||||||| |||   || | ||||||||| |||||||||||||||    
T  18441507 ttaactgccgagggggcaaaaacgtattttacttgtgtgtctcagccttatgaaatgtgtcaacaacaatt 18441577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 178
Target Start/End: Original strand, 41858089 - 41858264
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||   || |||  ||||| | |||||||||| ||||||||| ||||  ||| |||    
T  41858089 agagagcttctgccagatttgtagcagaagatcctcgacagttaactcccgaggtt--cctcggcagttaactgcagccggtttttgaattcttcgccag 41858186  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 178  Q
    |||||||||||||| |||||||| |||||||||  |||   || | | ||||||| ||||||||||||||| ||||||    
T  41858187 ttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccatatgaaatgtgtcaacaacaattctcaaaa 41858264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 14 - 173
Target Start/End: Complemental strand, 42602554 - 42602395
Alignment:
Q  14 cagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 113  Q
    |||||||||| ||||||||||||||||||||||||  || |||||||||| | |||||||||||||||||||| ||||  ||| ||||||||||||||      
T  42602554 cagatttgtatcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgata 42602455  T
Q  114 gagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
    || ||||||  |||||||||  |||   || | | |||||||||||||||||||| ||||    
T  42602454 gaacaaaaatgtattttactcgtgtttctcagccatatgaaacgtgtcaacaacattttt 42602395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 18438707 - 18438571
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||||||   || |||||||||| | |||||||||| |||||| || |||| ||| ||||||||||||||| || |||||| | ||||||||||    
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttactt 18438608  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
     ||| |||| | |||||| || |||||||||||||||    
T  18438607 gtgtgcatcagccttatgcaatgtgtcaacaacaatt 18438571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 26451587 - 26451515
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaact 73  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||| | |||||||    
T  26451587 agagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaact 26451515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 34 - 170
Target Start/End: Complemental strand, 41855442 - 41855306
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||| |||||||||  || |||||||||| | |||||||||| ||| ||||| ||||  ||||||||||||||||||||  |||||||| |||||||||    
T  41855442 ctcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgtattttact 41855343  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaat 170  Q
     ||||   || | | ||||||| ||||||||||||||    
T  41855342 catgtttctcagccatatgaaatgtgtcaacaacaat 41855306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 54 - 174
Target Start/End: Complemental strand, 7168142 - 7168022
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| | |||||||||| ||||||||| ||||  ||| ||| |||| | |||||| |||||| | |||||||||| ||| | || | |||||||    
T  7168142 gttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttacttgtgtgcctcagccttatga 7168043  T
Q  154 aacgtgtcaacaacaattttc 174  Q
    || ||||||||||||||||||    
T  7168042 aatgtgtcaacaacaattttc 7168022  T

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Target: chr8; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 35 - 126
Target Start/End: Original strand, 42605234 - 42605325
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacata 126  Q
    ||||||||||||||  ||||||||| ||| | |||||||||| ||| ||||| ||||  ||||||||||||||||||||| | |||||||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaaacata 42605325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 34 - 172
Target Start/End: Complemental strand, 22577739 - 22577601
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||||| |||||||||| ||  ||||| |||| |||  || ||||||||||||||| ||||||| ||||||| |    
T  22577739 ctcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgtattttatt 22577640  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattt 172  Q
    | |||  ||| | ||| ||||| || |||||||| ||||    
T  22577639 tgtgtgtatctgccttgtgaaatgtatcaacaacgattt 22577601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 1114818 - 1114718
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||||||||||||||  || | |||||||| | |||||||||| |||| |||  ||||||||| ||||||||||||||||| | |||| | ||||||||    
T  1114818 cctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttac 1114719  T
Q  133 t 133  Q
    |    
T  1114718 t 1114718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 33 - 112
Target Start/End: Original strand, 34823014 - 34823093
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgag 112  Q
    ||||||||||||||||  || ||||||||||||  ||||||||| |||  |||| |||| ||||||||||||||||||||    
T  34823014 cctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgag 34823093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 138
Target Start/End: Complemental strand, 35962383 - 35962277
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||||||||||||||   || |||||||||| | |||||||| | |||| |||  |||| |||||||||||||||||||| | |||||| | |||||||    
T  35962383 tcctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccgagagggcaaaatcgtatttta 35962284  T
Q  132 cttatgt 138  Q
    || ||||    
T  35962283 ctaatgt 35962277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 82 - 175
Target Start/End: Complemental strand, 3395918 - 3395825
Alignment:
Q  82 tttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttca 175  Q
    ||||| |||| |||| ||||||||||| ||||| ||||||||||||||||||| ||| | ||   ||||||||| ||||||| | |||||||||    
T  3395918 tttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatgtgtcaagagcaattttca 3395825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 4866475 - 4866427
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 115  Q
    |||||||||| ||||||||| ||||||| ||||||||||||||||||||    
T  4866475 gttaactgcagccggtttttgaatttcttgacagttaactgccgaggga 4866427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 133
Target Start/End: Complemental strand, 18205860 - 18205761
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||| | | |||||||||| ||||||||| ||||  ||| |||||||| |||||||  | |||||| |||||||||    
T  18205860 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtattttact 18205761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3395973 - 3395927
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||||    
T  3395973 agagagtttctgccatatttgtagcagaagatcctcggcagttaact 3395927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 21406343 - 21406261
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||||  || ||||||||||   |||||||||| ||||||| | |||| |||| ||||||||||| |||||    
T  21406343 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggg 21406261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 21800835 - 21800753
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||||  || ||||||||||   |||||||||| ||||||| | |||| |||| ||||||||||| |||||    
T  21800835 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgcagaggg 21800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22547550 - 22547504
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||| ||||||||||||| ||||||||    
T  22547550 agagagcttctgccagatttgtagtagaagatcctcggtagttaact 22547504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38871880 - 38871834
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    |||||||| || ||||||||||||||||||||||| |||||||||||    
T  38871880 agagagctcctgccagatttgtagcagaagatccttggcagttaact 38871834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 138
Target Start/End: Original strand, 7172606 - 7172690
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    ||||| |||| | ||||| |||| ||||||||  ||||||||| ||||||||||  || || |||||||| ||||||||||||||    
T  7172606 gtttttctcggcagttaattgcagccggttttaaaatttctcggcagttaactgttgatggggcaaaaacgtattttacttatgt 7172690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 94 - 134
Target Start/End: Original strand, 28168658 - 28168698
Alignment:
Q  94 tcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||||||||  |||||||||||||||||||    
T  28168658 tcgacagttaactgccgaggaggcaaaaacatattttactt 28168698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 57 - 133
Target Start/End: Complemental strand, 45454457 - 45454381
Alignment:
Q  57 ttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||| | ||||||||||||||| |||  |||| |||| ||||||||||||||||  |||||| | |||||||||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttact 45454381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41274699 - 41274652
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||||||| |||||||| ||| ||||||| |||||||||||||||    
T  41274699 agagagcttctgccagatttatagtagaagattctcggcagttaacta 41274652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 21835176 - 21835258
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||| ||  || ||||||||||   |||||||||| ||||||| | |||| ||||||| |||||||| |||||    
T  21835176 tcctcggcagttaaataccgaagttttcctcggtagttaactgcagccggtttatgaattcctcgacatttaactgcagaggg 21835258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 171
Target Start/End: Original strand, 40077248 - 40077386
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||||||||||||||  || |||||||||| | ||||||||||  ||| |||| |||  || ||||||| || |  ||||| |||||||| ||||||||    
T  40077248 cctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttac 40077347  T
Q  133 ttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    |  |||   || | ||||| ||| |||||||||||||||    
T  40077348 tcgtgtttctcagccttatcaaatgtgtcaacaacaatt 40077386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 37779758 - 37779713
Alignment:
Q  2 gagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||  |||||||||||||||| ||||||| |||||||||    
T  37779758 gagagcttctgtcagatttgtagcagaatatcctcgacagttaact 37779713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 7121783 - 7121863
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgag 112  Q
    ||||||||||||||||   || |||||||||  | |||||||||| |||||| || ||  | |||||||||||||||||||    
T  7121783 tcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcgacagttaactgccgag 7121863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 5e-34; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 958560 - 958732
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| || |||||||||||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||||||| ||||  ||| |||    
T  958560 agagagcttctgccggatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatcg-cag 958658  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    ||||||| |||| |  ||||||| |||||||||||||| | || | ||||| ||| ||||||||| ||||||||    
T  958659 ttaactgtcgagaggacaaaaacgtattttacttatgtgcctcagccttataaaatgtgtcaacatcaattttc 958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 29700268 - 29700441
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||  || |||||||||| | |||||||||| |||||| || |||| |||  |||    
T  29700268 agagagcttctgccagatttgtagcagaagatcatcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcag 29700367  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    ||||||| |||||   ||||| | |||||||||| ||| | || | ||||||||| ||||||||||||||||||    
T  29700368 ttaactgtcgaggagacaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 29700441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 44561296 - 44561469
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||||||||||| |||||||||||||||||||  ||  |||||||||   |||||||||| ||||||||| | || |||| |||    
T  44561296 agagagcttctgccagatttgtagcagacgatcctcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggcag 44561395  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    |||||  ||||| | |||||| | |||||||||  |||   || | ||||||||| ||||||||||||||||||    
T  44561396 ttaacaaccgagagggcaaaatcgtattttactcgtgtttctcagccttatgaaatgtgtcaacaacaattttc 44561469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 56138359 - 56138222
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt-----ttcaatttctc 95  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||| | |||||||||| |||| ||     || ||||||||    
T  56138359 agagagcttctgccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatttaatttctc 56138260  T
Q  96 gacagttaactgccgagggagcaaaaacatattttact 133  Q
    | |||||||||| ||| || |||||| | |||||||||    
T  56138259 ggcagttaactgtcgaaggggcaaaatcgtattttact 56138222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 35 - 173
Target Start/End: Original strand, 37959720 - 37959858
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  ||||||||||||| | |||||||||| | |||| || |||| ||| |||||||||||||||||| | |||||| |||||||||     
T  37959720 tcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactc 37959819  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
     ||| | || | |||||| || |||||||||||||||||    
T  37959820 gtgtgcctcagccttatgtaatgtgtcaacaacaatttt 37959858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 4768719 - 4768612
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| || | |||| |||| |||| ||||||||||||||||| ||||||  ||||||||||| ||| |||| | ||||||||| ||||||||||    
T  4768719 gttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaattatattttacttgtgtgcatcagccttatgaaatgtgtcaacaa 4768620  T
Q  167 caattttc 174  Q
    ||||||||    
T  4768619 caattttc 4768612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 51426610 - 51426471
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||||||| ||| ||||| |||| |  ||||||||| ||| ||||| |||| ||||||||||||||| |||  |  ||||||| ||||||||||    
T  51426610 tcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttactt 51426511  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
     ||| | |  | ||||||||||||||||||||||||||||    
T  51426510 gtgtgcctaagccttatgaaacgtgtcaacaacaattttc 51426471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 21472504 - 21472624
Alignment:
Q  55 ttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaa 154  Q
    ||||||||| | |||||||||| ||| ||||| |||| |||| ||||||||||||||||  |||||||| |||||||||  |||   || | ||||||||    
T  21472504 ttttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgtttctcagccttatgaa 21472603  T
Q  155 acgtgtcaacaacaattttca 175  Q
    | |||||||||||||||||||    
T  21472604 atgtgtcaacaacaattttca 21472624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 39 - 177
Target Start/End: Original strand, 38464770 - 38464907
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    ||||||||||  || |||||||| ||| |||||||||| |||||||   |||| |||| || ||||||| ||||| ||||||| ||||||||||| ||||    
T  38464770 cagttaactaccgaggttttccttgacagttaactgcagccggtttcg-aattcctcgtcatttaactgtcgaggaagcaaaatcatattttactcatgt 38464868  T
Q  139 acatcggtcttatgaaacgtgtcaacaacaattttcaaa 177  Q
    || ||   ||||||||| ||||||||||||||| |||||    
T  38464869 acctcaaccttatgaaatgtgtcaacaacaattctcaaa 38464907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 1042042 - 1041932
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||| | |||||||||||| |||||||||||||||||||||||  ||  |||| |||| | ||||||||||  ||| |||  |||| |||| |||    
T  1042042 agagagcttatgccagatttgtagtagaagatcctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcag 1041943  T
Q  101 ttaactgccga 111  Q
    |||||||||||    
T  1041942 ttaactgccga 1041932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 178
Target Start/End: Original strand, 4979914 - 4980060
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  |||  |||||||  | |||||||||| ||||||||| || |  ||||||||||||||||||||||| |||||| ||  |||    
T  4979914 tcctcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaatta 4980013  T
Q  132 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 178  Q
    ||  ||| | ||   |||||| || ||||||||||||||| ||||||    
T  4980014 ctcgtgtgcctcaaccttatgcaatgtgtcaacaacaattctcaaaa 4980060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 31 - 133
Target Start/End: Complemental strand, 9890071 - 9889969
Alignment:
Q  31 atcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 130  Q
    ||||||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| | |||| | ||||||    
T  9890071 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttt 9889972  T
Q  131 act 133  Q
    |||    
T  9889971 act 9889969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 35 - 133
Target Start/End: Complemental strand, 11494616 - 11494519
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||||||||  |||| |||||||||||| |||||||||  ||||||| |||||||||    
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttttg-aattcctcgacagttaattgccgaggggacaaaaacgtattttact 11494519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 54 - 180
Target Start/End: Original strand, 49572919 - 49573045
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| | |||||||||| ||| || || |||| ||||||||||||||| ||| || |||||||| |||||||||| ||| | || | ||||||     
T  49572919 gttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgtgcctcagccttatgc 49573018  T
Q  154 aacgtgtcaacaacaattttcaaaaat 180  Q
    || ||||||||||| ||| || |||||    
T  49573019 aatgtgtcaacaacgattctctaaaat 49573045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4786300 - 4786345
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaac 46  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||    
T  4786300 agagagcttctaccagatttgtagcagaagatcatcggcagttaac 4786345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 15999796 - 15999878
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||||  || |||||||||| | ||||| |||| |||| |||  ||||||||| |||||||||||||||||    
T  15999796 tcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccgaggg 15999878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34154394 - 34154440
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||    
T  34154394 agagagcttctgccagatttgtagcagaagatcctctgcagttaact 34154440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 34530761 - 34530807
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  34530761 agagagcttctgccaaatttgtagcagaagatcctcggcagttaact 34530807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39588173 - 39588127
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39588173 agagagcttctgccatatttgtagcagaagatcctcggcagttaact 39588127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 51429295 - 51429341
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||||||||||||||||||||||||| |||||||||    
T  51429295 agagagcttcttccagatttgtagcagaagatcctcgacagttaact 51429341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 55794004 - 55793916
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||||||||||   || |||||||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  55794004 gcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 55793916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 174
Target Start/End: Complemental strand, 955865 - 955726
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  || ||||| |||| | |||||||||| ||| ||||| |||| |||  |||||||||||| | |  |||||||| ||||||||||    
T  955865 tcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttactt 955766  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
     ||| | ||    |||||||| ||||||||| ||||||||    
T  955765 gtgtgcctcaactttatgaaatgtgtcaacatcaattttc 955726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 34154434 - 34154541
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| ||||||||| |||| |||| |||||||||||||| ||  ||||||  ||||||||   |||   || | ||||||||| ||||||||||    
T  34154434 gttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaatgtattttacccgtgtttctcagccttatgaaatgtgtcaacaa 34154533  T
Q  167 caattttc 174  Q
    ||||||||    
T  34154534 caattttc 34154541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 243311 - 243357
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||||||||||| ||||||||||||| |||||||||    
T  243311 agagagcttctgccagatttgtaacagaagatcctcgacagttaact 243357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 55 - 133
Target Start/End: Original strand, 1044539 - 1044617
Alignment:
Q  55 ttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||| | |||||||||| || | |||  ||||  |||||||||||||||||| ||||||||| |||||||||||    
T  1044539 ttttcctcggcagttaactgcagccagatttcaaattcatcgacagttaactgccgaaggagcaaaatcatattttact 1044617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6283433 - 6283479
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||  ||||||||| |||||||||||||||||||||||||    
T  6283433 agagagcttcggccagatttgaagcagaagatcctcggcagttaact 6283479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 15995798 - 15995716
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| || ||||||||||||||    
T  15995798 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgaggg 15995716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 18884501 - 18884583
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||||||||||   || ||||| |||| | |||||||||| ||||||||||||  | ||| |||||||||||||||||    
T  18884501 tcctcggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccgaggg 18884583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 19069263 - 19069181
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| || ||||||||||||||    
T  19069263 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccgaggg 19069181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 56304957 - 56304911
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||||||||||||||||| |||||||||| ||||||    
T  56304957 agagagcttctgccagatttgtagcagaaaatcctcggcaattaact 56304911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 6178099 - 6178156
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  6178099 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 6178156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 41795345 - 41795402
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  41795345 gcagaagatcctcggcagttaactaacgaggttttcctcggcagttaactgcagccgg 41795402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 49094168 - 49094111
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  49094168 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 49094111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 67 - 115
Target Start/End: Complemental strand, 17139665 - 17139618
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 115  Q
    |||||||||| ||||||||| | ||||||||||||||||||||||||||    
T  17139665 gttaactgcagccggtttttta-tttctcgacagttaactgccgaggga 17139618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 34 - 134
Target Start/End: Complemental strand, 21470977 - 21470877
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||  | ||||||||||  | |||||| |||  ||||||||||||||||||||    ||||||| |||||||||    
T  21470977 ctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttact 21470878  T
Q  134 t 134  Q
    |    
T  21470877 t 21470877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 28081558 - 28081490
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    |||| ||||||||||||||||||||||||| || |||||||  ||  ||||||||| | ||||||||||    
T  28081558 ttctgccagatttgtagcagaagatcctcgacacttaactaacgagattttcctcggcagttaactgca 28081490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 16984158 - 16984249
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    |||||||||||||||||| || |||||||||| | |||||||||| |||| |||  ||    ||| ||||||||||||||||| | ||||||    
T  16984158 tcctcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaac 16984249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 106
Target Start/End: Original strand, 24417448 - 24417487
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaact 106  Q
    |||||||||| ||||||||| |||||||||||||||||||    
T  24417448 gttaactgcagccggtttttgaatttctcgacagttaact 24417487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 171
Target Start/End: Original strand, 44051089 - 44051228
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || | ||||||||   |||||||||| ||||||| | | || |||| |||||||| ||||| || |||||||| ||  |||    
T  44051089 tcctcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaatta 44051188  T
Q  132 cttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    ||  ||| | || | |||||| || |||||||||||||||    
T  44051189 ctggtgtgcctcagccttatgcaatgtgtcaacaacaatt 44051228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 48806561 - 48806482
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||  |||  ||||||||| | |||||||||| |||||| || ||  | ||||||||||||||||||    
T  48806561 tcctcggcagttaactgctgaaattttcctcggcagttaactgcagccggttctttaaaatttcgacagttaactgccga 48806482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 123
Target Start/End: Complemental strand, 50274812 - 50274745
Alignment:
Q  56 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    |||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| ||||||||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaac 50274745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 134
Target Start/End: Complemental strand, 18578705 - 18578623
Alignment:
Q  52 atgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||| |||| | | |||||||| ||| ||||| |||| ||||||||||||||||| |||  |||||||  ||||||||||    
T  18578705 atgtttttctcggcagataactgcagccgttttttgaattcctcgacagttaactgccaaggaggcaaaaatgtattttactt 18578623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 37394289 - 37394223
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||||||||| |||  |||| ||||||||||||||||||| |  |||||| | |||||||||    
T  37394289 gttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttact 37394223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 37865232 - 37865203
Alignment:
Q  18 tttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||||||||||||||||||||||    
T  37865232 tttgtagcagaagatcctcggcagttaact 37865203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42885558 - 42885510
Alignment:
Q  1 agagagcttctaccagattt--gtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||||||||  ||||||||||||| |||||||||||||    
T  42885558 agagagcttctgccagatttttgtagcagaagatcatcggcagttaact 42885510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 48256567 - 48256624
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatt 91  Q
    ||||||||||||||| ||| |||||||||| | |||||||||| |||| |||| ||||    
T  48256567 ctcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaatt 48256624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 123
Target Start/End: Complemental strand, 6280926 - 6280842
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    ||||||||||  ||||||||||||     ||||||||| ||||||||| ||||  | ||||||||||||||||| | ||||||||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaac 6280842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 109
Target Start/End: Complemental strand, 41023461 - 41023385
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgcc 109  Q
    ||||||||||||||||  || | |||||||  | |||||||||| |||| |||  ||||||||| ||||||||||||    
T  41023461 cctcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgcc 41023385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 41803105 - 41802973
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||||||||| |||||||||||||||||||||  || |||||||||| | |||||||||| ||||||||| ||||  ||| |||    
T  41803105 agagagcttctgccagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcag 41803006  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||| | |||||||| |||||||||    
T  41803005 ttaactgccgagtgggcaaaaacgtattttact 41802973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 29929500 - 29929355
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||| || |||||||||| | ||||| |||| ||||||||| |||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  29929500 ctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttact 29929401  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    | ||| | || | ||||| ||| |||||||||||||||||| ||||    
T  29929400 tgtgtgcctcagccttataaaatgtgtcaacaacaattttctaaaa 29929355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 34 - 179
Target Start/End: Complemental strand, 29978654 - 29978509
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||| || |||||||||| | ||||| |||| ||||||||| |||| ||| ||||||||||| ||||||||||||| |||||||||||    
T  29978654 ctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttact 29978555  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    | ||| | || | ||||| ||| |||||||||||||||||| ||||    
T  29978554 tgtgtgcctcagccttataaaatgtgtcaacaacaattttctaaaa 29978509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 45101814 - 45101987
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||   | |    ||||| | |||||||||| ||||||||| |||| ||| |||     
T  45101814 agagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaagaaaacctcggcagttaactgcagccggtttttgaattcctcaacaa 45101913  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    ||||||||||||||   |||||| |||||||||||||| | ||   ||||||||| ||||| ||||||||||||    
T  45101914 ttaactgccgaggggataaaaacgtattttacttatgtgcctcaaccttatgaaatgtgtcgacaacaattttc 45101987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 173
Target Start/End: Original strand, 28611099 - 28611238
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  | ||||||||||| | |||||||||| ||||||||| ||||||||| ||||||||||||||||| ||||||  ||||||||||    
T  28611099 ctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaattatattttact 28611198  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
    | |||   || | ||||||||| |||| || |||||||||    
T  28611199 tgtgtgtctcagccttatgaaatgtgtaaagaacaatttt 28611238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 34694400 - 34694513
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||   || ||||| |||| | ||| |||||| |||| |||  |||| ||||||||    
T  34694400 agagagcttctgccagatttgtagcagaagatcctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacag 34694499  T
Q  101 ttaactgccgaggg 114  Q
    ||||||||||||||    
T  34694500 ttaactgccgaggg 34694513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 51402364 - 51402496
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||  || |||||||||||| ||||||| ||  || ||||| ||||  ||  ||     
T  51402364 agagagcttctgacagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaattattctgcaa 51402463  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||| |||| ||||||||| |||||||||    
T  51402464 ttaactgctgaggaagcaaaaacgtattttact 51402496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 55207629 - 55207749
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||   | ||| |||| | | |||||||||| ||||||||| ||||  ||| |||    
T  55207629 agagagcttctgccagatttgtagcagaagatcctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcag 55207728  T
Q  101 ttaactgccgagggagcaaaa 121  Q
    ||||||||||| || ||||||    
T  55207729 ttaactgccgatggggcaaaa 55207749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 41577182 - 41577012
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| | ||||||||||||||||||||||||||||| ||||  || |||||  ||||| |||||||||| ||| ||||| ||||  |||||||    
T  41577182 agagagcttctgcaagatttgtagcagaagatcctcggcagtttactaccgaagtttttgtcgacagttaactgcaaccgattttttaattcatcgacag 41577083  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    ||||||| |||    |||||||| ||||||| || | |   || | ||||||||| |||||||||||||||    
T  41577082 ttaactgtcgaaaaggcaaaaacgtattttatttgtatttctcagccttatgaaatgtgtcaacaacaatt 41577012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 55385244 - 55385122
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||||||  || |||||||||| | |||||||||| |||| |||  ||    ||| |||    
T  55385244 agagagcttctgccagatttgtagcagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcag 55385145  T
Q  101 ttaactgccgagggagcaaaaac 123  Q
    |||||||||||||| ||||||||    
T  55385144 ttaactgccgagggggcaaaaac 55385122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 179
Target Start/End: Original strand, 29918340 - 29918485
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||| | |||||||||| ||||||||  ||||  ||| ||||||| |||||||||  ||||| | |||||||||    
T  29918340 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttact 29918439  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    ||||| | || | |||||||||  ||||||||||||||||| ||||    
T  29918440 tatgtgcctcagccttatgaaatatgtcaacaacaattttctaaaa 29918485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 34 - 179
Target Start/End: Original strand, 29967493 - 29967638
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||| | |||||||||| ||||||||  ||||  ||| ||||||| |||||||||  ||||| | |||||||||    
T  29967493 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgtattttact 29967592  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    ||||| | || | |||||||||  ||||||||||||||||| ||||    
T  29967593 tatgtgcctcagccttatgaaatatgtcaacaacaattttctaaaa 29967638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 41579724 - 41579865
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||||| || |||| |||  || |||||||||||||| | |||| | ||||||||||    
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcaattaactgccgagggggaaaaatcgtattttactt 41579823  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 176  Q
    |||| | || | |||||| |||||||||||||||||| ||||    
T  41579824 atgtgcctcagccttatgcaacgtgtcaacaacaattctcaa 41579865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 13896842 - 13896974
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||||||| |||| ||| ||||||||||||||  || |||||||||||| |||||||||| || ||| || ||||  ||  ||     
T  13896842 agagagcttctgccagatttgtagtagaaaatcttcggcagttaactaccgaggttttcctcgacagttaactgcagccagttattaaattcttcagcaa 13896941  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||   |||||||||||||||||    
T  13896942 ttaactgccgaggagtcaaaaacatattttact 13896974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 34 - 138
Target Start/End: Complemental strand, 42756233 - 42756129
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||| | || |||||||||| | |||||||||| |||| |||| |||| |||||||||||||||| ||||| |||||||| |||||||||    
T  42756233 ctcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgtattttact 42756134  T
Q  134 tatgt 138  Q
     ||||    
T  42756133 catgt 42756129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 52570532 - 52570661
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||||| |||| |||||||||||| |||||||||||||||||||||||  || ||||| ||||   ||||||||||  |||||||| ||||  ||| |||    
T  52570532 agagagtttctgccagatttgtagtagaagatcctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcag 52570631  T
Q  101 ttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||| | |||||| |||||||    
T  52570632 ttaactgccgaggg-gaaaaaacgtatttta 52570661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 35 - 176
Target Start/End: Original strand, 2432943 - 2433084
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||   | |||||||||||| |||||||| |||||||| || |||| ||||||||||||||||||||||   |||| | |||||||||     
T  2432943 tcggcagttaactaccaaggttttcctcgacagttaactgtatccggttattgaattcctcgacagttaactgccgaggggataaaagcgtattttactc 2433042  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 176  Q
     ||| | || | |||||| || ||||||||||||||| ||||    
T  2433043 gtgtgcctcagccttatgcaatgtgtcaacaacaattctcaa 2433084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 41137815 - 41137693
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| |||||||||||||||||||||||||| ||||          |||||||||| | |||||||||| |||| |||  |||| |||| |||    
T  41137815 agagagcttctgccagatttgtagcagaagatcctcggtagtt----------gttttcctcggcagttaactgcagccggatttcaaattcctcggcag 41137726  T
Q  101 ttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||| || |||||||||||||||||||||    
T  41137725 ttaactgctgatggagcaaaaacatattttact 41137693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 38 - 178
Target Start/End: Original strand, 30256006 - 30256146
Alignment:
Q  38 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatg 137  Q
    |||||||||||| || |||||||||| | |||||||||| ||||||||| |||| |||| ||||||||| || |||| |||   |  |||||||||| ||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactaccaagggggcatttatgtattttacttgtg 30256105  T
Q  138 tacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 178  Q
    | | || |  |||||||| ||||||||||||||||||||||    
T  30256106 tgcctcagctttatgaaatgtgtcaacaacaattttcaaaa 30256146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 46344991 - 46344911
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||| | |||||||||| ||| ||||| |||| |||||||||||||||||||||| ||||||| |||||||||||    
T  46344991 gttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaaaatattttactt 46344911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 24703381 - 24703460
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccg 80  Q
    ||||||||||| ||||||||||||||||||||| |||||||||||||  ||| | |||||||| | ||||||||||||||    
T  24703381 agagagcttctgccagatttgtagcagaagatcatcggcagttaactcctgaggatttcctcggcagttaactgcatccg 24703460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43476299 - 43476176
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttc-aatttctcgaca 99  Q
    |||||||||||  ||||||||||||| |||||||||||||||||||||  || |||||||||| | |||||||||| |||| ||||| ||    ||| ||    
T  43476299 agagagcttctgtcagatttgtagcaaaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttctaaaacttcggca 43476200  T
Q  100 gttaactgccgagggagcaaaaac 123  Q
    ||||||| ||||||| ||||||||    
T  43476199 gttaacttccgagggggcaaaaac 43476176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 43571717 - 43571824
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| |||  |||| |||| |||  ||||||||||||||||| ||||||||||||||||||| ||||| |    |||||| || ||||||||||    
T  43571717 gttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaacatattttacttgtgtacctgaaccttatgtaatgtgtcaacaa 43571816  T
Q  167 caattttc 174  Q
    ||||||||    
T  43571817 caattttc 43571824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 113
Target Start/End: Complemental strand, 34691701 - 34691620
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 113  Q
    |||||||||||||||||  || |||||||||||| |||||||||| |||| |||| | || |||| ||||||||||||||||    
T  34691701 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccgagg 34691620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 46347687 - 46347791
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||||| |||| || |||||||||||||||||| ||| ||||||| ||| || |||||||||| | |||||||||| ||| || || ||||| |||||||    
T  46347687 agagagtttctccctgatttgtagcagaagatcttcgacagttaattatcgaggttttcctcggcagttaactgcagccgattattgaattt-tcgacag 46347785  T
Q  101 ttaact 106  Q
    ||||||    
T  46347786 ttaact 46347791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 39 - 131
Target Start/End: Original strand, 7247864 - 7247956
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||||||||  || |||||||||| | |||||||||| |||||| || |||| |||| ||||||||||||||||| |||||| | |||||||    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtatttta 7247956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 8 - 76
Target Start/End: Complemental strand, 36134423 - 36134355
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    |||| |||||||||||||||||||||||||||||||||||   || |||||||||| | ||||||||||    
T  36134423 ttctgccagatttgtagcagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgca 36134355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 49609490 - 49609370
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||| | |||||||||||||||||| |||||||||||||||||  || ||||| ||||||  ||||||||  |||  |||  |||| |||||||     
T  49609490 agagagcttatgccagatttgtagcagaagttcctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttcaaattcctcgacaa 49609391  T
Q  101 ttaactgccgagggagcaaaa 121  Q
    ||||||  ||| |||||||||    
T  49609390 ttaactatcgaaggagcaaaa 49609370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 2 - 113
Target Start/End: Original strand, 49219758 - 49219869
Alignment:
Q  2 gagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagt 101  Q
    ||||||||||  || |||||||||||||||||||||  |||||||||   | |||||||||| | |||||||||| |||| |||  |||| |||| ||||    
T  49219758 gagagcttctgtcaaatttgtagcagaagatcctcgatagttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagt 49219857  T
Q  102 taactgccgagg 113  Q
    ||||| ||||||    
T  49219858 taactaccgagg 49219869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 51696540 - 51696587
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||    
T  51696540 agagagcttctgccagatttgcagcagaagatcctcggcagttaacta 51696587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 19454317 - 19454363
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||| ||||||||||||||||||||||    
T  19454317 agagagcttctgccagatttgtagtagaagatcctcggcagttaact 19454363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 49268845 - 49268943
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||||||||||  ||||||||||||| | |||||||||| |||| |||| |||| ||| ||||||||| || || ||  ||||| |||||||||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaacggctgaagggacaaaatcatattttact 49268943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 4004776 - 4004849
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||| |||| |||||||||||||||||||||||||||| ||  || |||||||||| | |||||||||| ||||    
T  4004776 ttctgccaggtttgtagcagaagatcctcggcagttaagtaccgaggttttcctcggcagttaactgcagccgg 4004849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 41805694 - 41805811
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| | ||||| |||| ||||| ||| ||||  |||||||||||||||||||| ||||||||| ||  |||||| ||| | || | ||||||     
T  41805694 gttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcctcagccttatgc 41805793  T
Q  154 aacgtgtcaacaacaatt 171  Q
    || |||||| ||||||||    
T  41805794 aatgtgtcatcaacaatt 41805811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Original strand, 7839531 - 7839587
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    |||||||||| ||||||||| |||| |||||||||| ||||||||||| ||||||||    
T  7839531 gttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaac 7839587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 42807658 - 42807738
Alignment:
Q  93 ctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
    |||||||||||||||||||||  |||||||  ||||||| || ||| |||| | ||||||||| |||| ||||||||||||    
T  42807658 ctcgacagttaactgccgaggaggcaaaaatgtattttatttgtgtgcatcagccttatgaaatgtgttaacaacaatttt 42807738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 33 - 133
Target Start/End: Original strand, 49196447 - 49196547
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||| ||||||||||| |  ||||||||||   |||||||||| |||| |||| |||| ||||||||||| ||  |||||| |||||||| ||||||||    
T  49196447 cctcgacagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttac 49196546  T
Q  133 t 133  Q
    |    
T  49196547 t 49196547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 47
Target Start/End: Original strand, 2271286 - 2271325
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  2271286 ttctgccagatttgtagcagaagatcctcggcagttaact 2271325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 29 - 111
Target Start/End: Original strand, 2647693 - 2647776
Alignment:
Q  29 agatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    ||||||||||||||||||||  || |||||||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  2647693 agatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 2647776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 32 - 111
Target Start/End: Original strand, 32593109 - 32593188
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||||||| || ||||||||||   |||||||||| |||||| || ||  | ||||||||||||||||||    
T  32593109 tcctcggcagttaactatcgaagttttcctcggaagttaactgcagccggttctttaaaatttcgacagttaactgccga 32593188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 2743474 - 2743392
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||||||||||   || |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||    
T  2743474 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 2743392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 35 - 113
Target Start/End: Complemental strand, 19440329 - 19440251
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 113  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||||||| | ||||  ||| ||||||||||||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccgagg 19440251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 37 - 178
Target Start/End: Complemental strand, 48888811 - 48888671
Alignment:
Q  37 ggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttat 136  Q
    ||||||||||||  ||  ||||||||| | |||||||||| |||| |||| |||| |||| |||| |||||||||||| |||   || |||||||||| |    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcagt-aactgccgagggggcatttacgtattttacttgt 48888713  T
Q  137 gtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 178  Q
    || | || |||||||||||  ||| ||||  |||||||||||    
T  48888712 gtgcctcagtcttatgaaatatgtgaacagtaattttcaaaa 48888671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 49140836 - 49140893
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    ||||||| ||||||||||||||||| ||| |||||||||| | |||||||||| ||||    
T  49140836 gcagaagttcctcggcagttaactactgaggttttcctcggcagttaactgcagccgg 49140893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7245199 - 7245155
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaa 45  Q
    |||||||||||  ||||||||||||||||||| ||||||||||||    
T  7245199 agagagcttctgtcagatttgtagcagaagatactcggcagttaa 7245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 600541 - 600632
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    |||||||||||||||||  || |||||||||||| |||||||||  |||| ||| |||    ||| |||||||||| |||||| ||||||||    
T  600541 tcctcggcagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgagggcgcaaaaac 600632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 123
Target Start/End: Original strand, 19341591 - 19341682
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    ||||||||||||||||   || ||||||||||   |||||||||| |||| |||  |||| |||| |||||||||||||||||  |||||||    
T  19341591 tcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaac 19341682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 111
Target Start/End: Complemental strand, 24700797 - 24700718
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||||||  || | ||||||||   |||||||||| |||| |||  |||| |||||||||||||||||||    
T  24700797 tcctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 43568973 - 43568926
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    |||||||||||  |||||||||| |||||||||||| |||||||||||    
T  43568973 agagagcttctgtcagatttgtaacagaagatcctcagcagttaacta 43568926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 48246488 - 48246398
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 122  Q
    |||||||||||||||||  || |||||||||||| |||||||||| |||| |||  ||    ||  ||||||||||||||||| |||||||    
T  48246488 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccgagggggcaaaaa 48246398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 36 - 133
Target Start/End: Complemental strand, 11380513 - 11380416
Alignment:
Q  36 cggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||| |||||  || ||| |||||| | |||||||||| ||   |||| |||| |||| |||||||||||||| || |||||||| |||||||||    
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttact 11380416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 34049164 - 34049107
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    ||||||| |||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  34049164 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 34049107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 38 - 123
Target Start/End: Complemental strand, 46989617 - 46989532
Alignment:
Q  38 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    |||||||||||  || |||||||||| | |||||||||| ||||  ||  |||||||||  |||||||||||||| | ||||||||    
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaac 46989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 123
Target Start/End: Original strand, 48250868 - 48250957
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    ||||||||||||||   || |||||||||| | |||||||||| ||||  ||  |||| |||  ||||||||||||||||| ||||||||    
T  48250868 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaac 48250957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 52567837 - 52567700
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||   | ||||| |||| | ||||| |||| ||| ||||| ||||  ||| |||||||||||||||   |||||| | |||||||||    
T  52567837 ctcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttact 52567738  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
      ||| | || | |||||| ||||| ||||||||||||    
T  52567737 cgtgtgcctcagccttatgcaacgtatcaacaacaatt 52567700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 54389879 - 54389822
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    ||||||| |||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  54389879 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 54389822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 35 - 107
Target Start/End: Complemental strand, 9582620 - 9582548
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactg 107  Q
    |||||||||||||   || ||||| |||| | ||||||||||  |||||||| ||||||||| ||||||||||    
T  9582620 tcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 54 - 114
Target Start/End: Complemental strand, 13743347 - 13743287
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||    
T  13743347 gttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 13743287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 30355205 - 30355375
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  || |||||||||| | |||||||||| ||| ||||| ||||  ||  ||     
T  30355205 agagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaa 30355304  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    |||||||||||||| |||||| | |||||||||  |||   || ||| ||||||| |||||||||||||||    
T  30355305 ttaactgccgagggggcaaaagcgtattttactcgtgtttctcagtcatatgaaatgtgtcaacaacaatt 30355375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 46863312 - 46863480
Alignment:
Q  3 agagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagtt 102  Q
    ||||||||| ||||||||||||||||||||| ||||||||||||||  ||  ||||| |   | |||||||||| ||||||||||||||||||| |||||    
T  46863312 agagcttctgccagatttgtagcagaagatcttcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatttctcggcagtt 46863411  T
Q  103 aactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    ||||||||| || |||||||| |||||||||| |||   || | |||||| || | |||||||||||||    
T  46863412 aactgccgatggggcaaaaacgtattttacttgtgtgtctcagccttatgcaatgcgtcaacaacaatt 46863480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 33 - 174
Target Start/End: Original strand, 9494804 - 9494945
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||| |||||||||   || |||||||||| | |||||||||| ||||||||| |||| |||| ||||||||||||||||| ||| | || ||||||||    
T  9494804 cctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttac 9494903  T
Q  133 ttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    || ||| | || | ||||||||| ||||||||||||||||||    
T  9494904 ttgtgtgcctcagccttatgaaatgtgtcaacaacaattttc 9494945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 28980138 - 28980309
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcc-tcgactgttaactgcatccggtttttcaatttctcgaca 99  Q
    |||||||||||  |||||||||||||||| ||||||||||||||||||  || ||||||| ||| | ||||||||||||||| | || ||||  ||| ||    
T  28980138 agagagcttctgtcagatttgtagcagaaaatcctcggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcggca 28980237  T
Q  100 gttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    | ||||||| ||||| |||||||| |||||||||  |||   || | |||||| || |||||||||||||||    
T  28980238 gctaactgctgagggggcaaaaacgtattttactcgtgtgtctcagccttatgcaatgtgtcaacaacaatt 28980309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 41047884 - 41047715
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||  ||||||||||||||||||||||||||||||||||||  || |||||||||| | ||||||| || ||| || || ||||  ||  |||    
T  41047884 agagagcttcctccagatttgtagcagaagatcctcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaattcttctgcag 41047785  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    |||||| |||| | ||||||||  ||||||| |||||| |  | |||||||| || |||||||||||||||    
T  41047784 ttaactaccga-gaagcaaaaatgtattttatttatgtgccgcagtcttatgcaatgtgtcaacaacaatt 41047715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 42682087 - 42681931
Alignment:
Q  15 agatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||||||||||||||||||||||||| ||  || |||||||||| | |||||||||| | ||||||| |||||||| || ||||||| ||||||     
T  42682087 agatttgtagcagaagatcctcggcagttaattaccgaggttttcctcggcagttaactgcagctggtttttgaatttctcaaccgttaactaccgagga 42681988  T
Q  115 agcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
      ||||||   ||||||||||||| | || | ||||| |||  |||||| |||||||    
T  42681987 gacaaaaatgcattttacttatgtgcctcagccttataaaatatgtcaagaacaatt 42681931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 38 - 177
Target Start/End: Complemental strand, 36392195 - 36392056
Alignment:
Q  38 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatg 137  Q
    |||||||||| |||| |||||||||| | |||||| ||| ||| ||||| |||| ||| ||||||||||| |||||| |||||||| |||||||||| ||    
T  36392195 gcagttaacttttgaggttttcctcggcagttaaccgcaaccgatttttgaattcctcaacagttaactgtcgagggggcaaaaacgtattttacttgtg 36392096  T
Q  138 tacatcggtcttatgaaacgtgtcaacaacaattttcaaa 177  Q
    | | |  | |||||| || ||||||||||||||| |||||    
T  36392095 tgcctaagccttatgtaatgtgtcaacaacaattctcaaa 36392056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 33 - 179
Target Start/End: Complemental strand, 37340377 - 37340231
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||||||||||||||  || ||||| |||| | |||||||||| ||||||||| |||| ||||||||||||||| ||| |   ||||||| |||||||     
T  37340377 cctcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgtattttat 37340278  T
Q  133 ttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    |||||| | |  |||||||| || ||||||||| ||||| |||||||    
T  37340277 ttatgtgccttagtcttatgtaatgtgtcaacatcaattctcaaaaa 37340231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 40587768 - 40587693
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    |||||||||||  ||||||| ||||| ||||||||||||||||||||| ||| |||||||||||| ||||||||||    
T  40587768 agagagcttctttcagatttatagcataagatcctcggcagttaactactgaggttttcctcgacagttaactgca 40587693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 138
Target Start/End: Complemental strand, 45361690 - 45361619
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    |||||||||| |||| |||| |||| |||| |||||||||||||||||||||||||||||||||||| ||||    
T  45361690 gttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgt 45361619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 171
Target Start/End: Complemental strand, 47061000 - 47060864
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || |||||||||| | ||||||| || ||| ||||  |||| |||||||||||||||||||||| |||||||| |||||||||    
T  47061000 ctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttg-aattcctcgacagttaactgccgagggggcaaaaacgtattttact 47060902  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    | | | | || | |||||||||  ||||||||| ||||    
T  47060901 tgtatgcctcagccttatgaaatatgtcaacaataatt 47060864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 94 - 176
Target Start/End: Original strand, 10225902 - 10225985
Alignment:
Q  94 tcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg-aaacgtgtcaacaacaattttcaa 176  Q
    |||||||||||||| |||||  ||||||||||||||||||||||| | || | |||||| ||| ||||||||||||||||||||    
T  10225902 tcgacagttaactgtcgaggaggcaaaaacatattttacttatgtgcttcagccttatgaaaatgtgtcaacaacaattttcaa 10225985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Complemental strand, 46860552 - 46860485
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||  ||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||    
T  46860552 gttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttactt 46860485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 21188392 - 21188438
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  21188392 agagagcttctgccagatttgtagcagaagatcctcggcagttaact 21188438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 36394904 - 36394966
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcg 63  Q
    ||||||||||| |||||||||||||||||||||||||| |||||||||  || ||||||||||    
T  36394904 agagagcttctgccagatttgtagcagaagatcctcggtagttaactaccgaggttttcctcg 36394966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 47776408 - 47776307
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||| ||  || |||||||||| | |||||||||| || | |||| ||||||||| |||||||||| |||||| |||||| | |||||||    
T  47776408 tcctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtatttta 47776309  T
Q  132 ct 133  Q
    ||    
T  47776308 ct 47776307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 67 - 171
Target Start/End: Complemental strand, 48314714 - 48314611
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| |||||| || |||| |||| ||||||||||||||||| |||||||  |||||||||| ||||| ||   |||||| || ||||||||||    
T  48314714 gttaactgcagccggttattgaattcctcggcagttaactgccgaggg-gcaaaaatgtattttacttgtgtacctcaaccttatgcaatgtgtcaacaa 48314616  T
Q  167 caatt 171  Q
    |||||    
T  48314615 caatt 48314611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 8 - 63
Target Start/End: Complemental strand, 17838750 - 17838695
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcg 63  Q
    |||| ||||||||||||||||||||| ||||||||||||||| || ||||||||||    
T  17838750 ttctgccagatttgtagcagaagatcgtcggcagttaactatcgaggttttcctcg 17838695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 179
Target Start/End: Complemental strand, 19044369 - 19044223
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || |||||||||| |  |||||||||  ||||||   |||| |||| || |||||||||||| || ||||||| |||||||    
T  19044369 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtatttta 19044271  T
Q  132 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    || |||| | || | |||||| || |||||||||| |||| |||||||    
T  19044270 ctcatgtgcctcagccttatgcaatgtgtcaacaataattctcaaaaa 19044223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 20710267 - 20710413
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || |||||||||| |  |||||||||  ||||||   |||| |||| || |||||||||||| || ||||||| |||||||    
T  20710267 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcggtttca-aattcctcggcaattaactgccgagtgaacaaaaacgtatttta 20710365  T
Q  132 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    || |||| | || | |||||| || |||||||||| |||| |||||||    
T  20710366 ctcatgtgcctcagccttatgcaatgtgtcaacaataattctcaaaaa 20710413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 176
Target Start/End: Complemental strand, 10705302 - 10705180
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    ||||| |||| | |||||||||| ||| ||||| ||||||||| |||||||||||| |||| | |||||  |||||||||| ||| | |  | |||||||    
T  10705302 gtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgccaaggggggaaaaatgtattttacttgtgtgccttagccttatga 10705203  T
Q  154 aacgtgtcaacaacaattttcaa 176  Q
    ||  |||||| ||||||||||||    
T  10705202 aatatgtcaataacaattttcaa 10705180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 56 - 138
Target Start/End: Original strand, 27453615 - 27453697
Alignment:
Q  56 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    |||||||| | |||||||||| |||| |||| |||| |||| ||||||||||||||||| |||||  | ||||||||||||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaagtcgtattttacttatgt 27453697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 54 - 171
Target Start/End: Original strand, 41049208 - 41049324
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| | |||||||||| ||| || || ||||  ||||||||||||| |||| | | ||||| | |||||||||||||| |||| | ||||||     
T  41049208 gttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaagaa-caaaagcgtattttacttatgtgcatcagccttatgc 41049306  T
Q  154 aacgtgtcaacaacaatt 171  Q
    || |||||||||||||||    
T  41049307 aatgtgtcaacaacaatt 41049324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 45364186 - 45364227
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagt 42  Q
    ||||||||||||||||||||||||| ||||||||||||||||    
T  45364186 agagagcttctaccagatttgtagccgaagatcctcggcagt 45364227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34139978 - 34139932
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||    
T  34139978 agagagcttctgccagatttgtagaggaagatcctcggcagttaact 34139932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 134
Target Start/End: Original strand, 42684218 - 42684262
Alignment:
Q  90 tttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||    
T  42684218 tttctcgacagttaactgccgatggaacaaaaacgtattttactt 42684262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 56 - 171
Target Start/End: Complemental strand, 34622551 - 34622436
Alignment:
Q  56 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaa 155  Q
    |||||||||| ||||||||||  |||||| | |||| |||  |||||||||| | |||| |||||||| ||  |||||| ||| | || | |||||| ||    
T  34622551 tttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaattacttgtgtgcctcagccttatgcaa 34622452  T
Q  156 cgtgtcaacaacaatt 171  Q
     |||||||||||||||    
T  34622451 tgtgtcaacaacaatt 34622436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 53 - 174
Target Start/End: Original strand, 36186491 - 36186611
Alignment:
Q  53 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt-acatcggtcttat 151  Q
    ||||||||||| | |||||||||| |||||||   |||| |||| || |||||||||||||| |||||| | |||||||||  ||| ||| | | |||||    
T  36186491 tgttttcctcggcagttaactgcaaccggtttcg-aattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgaca-cagccttat 36186588  T
Q  152 gaaacgtgtcaacaacaattttc 174  Q
    | || ||||||||||||||||||    
T  36186589 gcaatgtgtcaacaacaattttc 36186611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 24 - 81
Target Start/End: Original strand, 9367713 - 9367770
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    ||||||| |||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  9367713 gcagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 9367770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 90 - 131
Target Start/End: Original strand, 40590546 - 40590587
Alignment:
Q  90 tttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||||| ||||||||||||||||| |||||||| |||||||    
T  40590546 tttctcggcagttaactgccgagggggcaaaaacgtatttta 40590587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 171
Target Start/End: Complemental strand, 48269690 - 48269618
Alignment:
Q  98 cagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    ||||||||||||||| | | ||||||||||||||||| ||| | || | ||||| ||| |||||||||||||||    
T  48269690 cagttaactgccgagaggg-aaaaacatattttacttgtgtgcctcagccttataaaatgtgtcaacaacaatt 48269618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 10708333 - 10708401
Alignment:
Q  98 cagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||||||| || ||||||| ||||||||||  |||   || ||||||||||| ||||||||||    
T  10708333 cagttaactgccgaaggggcaaaaatatattttactcgtgtttctcagtcttatgaaatgtgtcaacaa 10708401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 20353927 - 20353971
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    ||||||||||||||||| ||| |||||||||||  ||||||||||    
T  20353927 tcctcggcagttaactactgaggttttcctcgatagttaactgca 20353971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 12783923 - 12784056
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||| | |||||||||||||||||||||||||||||||||||| ||| |||||||||||| | |||||||| |||||| || ||||  ||| |||    
T  12783923 agagagctttttccagatttgtagcagaagatcctcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggcag 12784022  T
Q  101 ttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||| || |||||| | ||||||||||    
T  12784023 ttaactgccgatggggcaaaagcgtattttactt 12784056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 13401593 - 13401465
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    |||||||||||  || |||||||||||||||||||||| |||||||||   || |||||||   | |||||||||| ||| ||||| |||| |||| |||    
T  13401593 agagagcttctgtcatatttgtagcagaagatcctcggtagttaactaccaatattttccttagcagttaactgcagccgattttttaattcctcggcag 13401494  T
Q  101 ttaactgccgagggagcaaaaacatattt 129  Q
    |||||||||||||| |||||| |||||||    
T  13401493 ttaactgccgagggggcaaaagcatattt 13401465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 13479767 - 13479660
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| | ||||||| |||| | |||||||||||| ||||||| |||||| | |||||||||| ||| | || | ||||||||| ||||||||||    
T  13479767 gttaactgcagctggtttttgaattccccgacagttaactaccgagggggcaaaagcgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaa 13479668  T
Q  167 caattttc 174  Q
    ||||||||    
T  13479667 caattttc 13479660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 31 - 176
Target Start/End: Complemental strand, 18001290 - 18001146
Alignment:
Q  31 atcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 130  Q
    |||||||| |||||| | | || |||||| ||| | |||||||||| ||||||||| |||| ||| |||||||||||||||  | |||   |||||||||    
T  18001290 atcctcggtagttaagtgtcgaggttttcttcggcagttaactgcagccggttttt-aattcctcaacagttaactgccgatagggcatttacatatttt 18001192  T
Q  131 acttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 176  Q
    |||| ||||| ||   ||||||||| ||||||||||||||||||||    
T  18001191 acttgtgtacctcaaccttatgaaatgtgtcaacaacaattttcaa 18001146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 131
Target Start/End: Complemental strand, 23958964 - 23958867
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||  || |||||||||| |  ||||||||| ||||||||  ||||||||| |||||||||||||||||  ||||||| |||||||    
T  23958964 ctcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgtatttta 23958867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 34 - 130
Target Start/End: Complemental strand, 16192843 - 16192747
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttt 130  Q
    ||||||||||||||   || | ||||||||||  ||||||||| ||| ||||| |||| |||||||||||||||||||||| |||||||| ||||||    
T  16192843 ctcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgtatttt 16192747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 23986013 - 23986080
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||| ||||||||| ||||||||| |||||||||||| |||| |||||||| ||||||||||    
T  23986013 gttaactgcaaccggtttttgaatttctcggcagttaactgccaagggggcaaaaacgtattttactt 23986080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29061377 - 29061331
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||    
T  29061377 agagagcttctaccagatttgtagcagaagatcctcggaagttaact 29061331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 122
Target Start/End: Complemental strand, 31768829 - 31768739
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 122  Q
    |||||||||||||||||  || |||||||||| |  ||||||||| |||| |||| |||| |||| ||||||||||||||||| |||||||    
T  31768829 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaaa 31768739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 13404632 - 13404768
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||   | ||||||| || | |||||||||| | |||| || |||| |||||||||||||| ||||||| |||||  | ||||||||||    
T  13404632 tcggcagttaactaccaaggttttccacggcagttaactgcagcaggttattgaattcctcgacagttaactaccgagggggcaaacgcgtattttactt 13404731  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
     ||| | |||| |||||| || |||| ||||||||||    
T  13404732 gtgtgcctcggccttatgcaatgtgttaacaacaatt 13404768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 32 - 108
Target Start/End: Complemental strand, 31146449 - 31146373
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 108  Q
    |||||||||||||||||  ||||||||||||||| |||||||||| |||| |||  |||| |||| |||||||||||    
T  31146449 tcctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 13388705 - 13388787
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||||  || |||||||||||| |||||||||| |||  |||  ||||||||| ||||||||| |||||||    
T  13388705 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaactaccgaggg 13388787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 163
Target Start/End: Complemental strand, 2051104 - 2050974
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttc-tcgacagttaactgccgagggagcaaaaacatatttt 130  Q
    ||||| |||| ||||||  || |||||||||| | |||||||||| |||||||  ||| ||| ||| |||||||||||||| ||||||||||| ||||||    
T  2051104 tcctctgcagataactaccgaggttttcctcggcagttaactgcaaccggttt--caaattcatcggcagttaactgccgaaggagcaaaaacgtatttt 2051007  T
Q  131 acttatgtacatcggtcttatgaaacgtgtcaa 163  Q
    |||  ||| |||| | |||||| || |||||||    
T  2051006 actcgtgtgcatcagccttatgcaatgtgtcaa 2050974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 37 - 174
Target Start/End: Original strand, 32643523 - 32643660
Alignment:
Q  37 ggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttat 136  Q
    ||||||||||||  || |||||||||||| |||||||||| |||| |||| |||| || | ||||||||||||||||  |||   || |||||||||| |    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccgaggaggcatttacgtattttacttgt 32643622  T
Q  137 gtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    |  | ||   ||||||||| |||| |||||||||||||    
T  32643623 gggcttcaaccttatgaaatgtgtgaacaacaattttc 32643660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 67 - 123
Target Start/End: Complemental strand, 7537239 - 7537183
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    |||||||||| ||||||||| |||| ||||||| |||||||||||||| ||||||||    
T  7537239 gttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaac 7537183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 22305192 - 22305104
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    |||| ||||||||||||||||||||  || |||||||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  22305192 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 22305104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 53 - 171
Target Start/End: Complemental strand, 29286284 - 29286166
Alignment:
Q  53 tgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatg 152  Q
    ||||||||||| | |||||||||| ||||||| | | || |||| ||||||||| ||||||| |||||||| ||  |||||| ||| | ||   ||||||    
T  29286284 tgttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatg 29286185  T
Q  153 aaacgtgtcaacaacaatt 171  Q
     || |||||||||||||||    
T  29286184 caatgtgtcaacaacaatt 29286166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32034358 - 32034404
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||| ||||| ||||||||||||||||||||| |||||||||||||    
T  32034358 agagatcttctgccagatttgtagcagaagatcatcggcagttaact 32034404  T

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Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 6204911 - 6204854
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  6204911 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 6204854  T

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Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 24 - 81
Target Start/End: Complemental strand, 11691878 - 11691821
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||||||||||||||||||||||||  || |||||||||| | |||||||||| ||||    
T  11691878 gcagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgg 11691821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 8193206 - 8193282
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 108  Q
    |||||||||||||||| | || |||||||||| | |||||||||| |||  |||| |||| |||| |||||||||||    
T  8193206 tcctcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactgc 8193282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 28362728 - 28362804
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 108  Q
    ||||| |||||||||||| || |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||    
T  28362728 tcctctgcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgc 28362804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29065835 - 29065791
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaa 45  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||    
T  29065835 agagagcttccgccagatttgtagcagaagatcctcgacagttaa 29065791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29074848 - 29074804
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaa 45  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||    
T  29074848 agagagcttccgccagatttgtagcagaagatcctcgacagttaa 29074804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29079612 - 29079568
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaa 45  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||    
T  29079612 agagagcttccgccagatttgtagcagaagatcctcgacagttaa 29079568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 29107421 - 29107377
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaa 45  Q
    ||||||||||  ||||||||||||||||||||||||| |||||||    
T  29107421 agagagcttccgccagatttgtagcagaagatcctcgacagttaa 29107377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 176
Target Start/End: Complemental strand, 32026096 - 32026037
Alignment:
Q  117 caaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 176  Q
    ||||||| |||||||||| ||| | || | ||||||||| ||||||||||||||||||||    
T  32026096 caaaaacgtattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaattttcaa 32026037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 2405512 - 2405438
Alignment:
Q  102 taactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaa 176  Q
    ||||||||||||||| |||||| |||||||||  |||  ||| | ||||| |||||||| |||||||||| ||||    
T  2405512 taactgccgagggagaaaaaacgtattttactcgtgtttatcagccttatcaaacgtgtgaacaacaattctcaa 2405438  T

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Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 78 - 131
Target Start/End: Original strand, 6320532 - 6320585
Alignment:
Q  78 ccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||| |||| |||| |||||||||||||||||||||   |||||||||||||||    
T  6320532 ccggatttttaattcctcgacagttaactgccgaggagacaaaaacatatttta 6320585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 73
Target Start/End: Complemental strand, 11157812 - 11157771
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaact 73  Q
    |||||||||||||||||| || |||||||||||| |||||||    
T  11157812 tcctcggcagttaactatcgaagttttcctcgacagttaact 11157771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 76
Target Start/End: Original strand, 11840247 - 11840291
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    |||||||||||||||||  || |||||||||||| ||||||||||    
T  11840247 tcctcggcagttaactaccgaggttttcctcgacagttaactgca 11840291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 67; Significance: 7e-30; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 13972169 - 13972001
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacag 100  Q
    ||||||||||| ||||||||||||||||||||||||||| ||| | ||  || |||||||||| |||||||||||| || |||||| |||| |||| |||    
T  13972169 agagagcttctgccagatttgtagcagaagatcctcggctgtttaataccgaggttttcctcggctgttaactgcagccagttttt-aattcctcggcag 13972071  T
Q  101 ttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
     |||||||||| || |||||||| |||||||||| |||   || | ||||||||| |||||||||||||||    
T  13972070 -taactgccgaaggggcaaaaacgtattttacttgtgtttctcagccttatgaaatgtgtcaacaacaatt 13972001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 29261488 - 29261349
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||| |||||||||| ||| |||||| ||| | ||||| |||| ||| |||| ||||||||| |||||||||||||||||  |||||||| |||||||||    
T  29261488 ctcgacagttaactactgaggttttcttcggcagttaattgcagccgattttacaatttctctacagttaactgccgaggaggcaaaaacgtattttact 29261389  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    | ||| |||| | ||||||||||||||||||||||||||||    
T  29261388 tctgtgcatc-gccttatgaaacgtgtcaacaacaattttc 29261349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 35 - 171
Target Start/End: Complemental strand, 46141855 - 46141719
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  ||||||||||||| | |||||||||| |||||| || |||| |||| ||||||||||||||| | |||||| | ||||||||||    
T  46141855 tcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccgagagggcaaaatcgtattttactt 46141756  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
     ||||| || | |||||| ||  ||||||||||||||    
T  46141755 gtgtacctcagccttatgcaatatgtcaacaacaatt 46141719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 34 - 174
Target Start/End: Complemental strand, 46973277 - 46973138
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||| || |||||||||| | |||||||||| ||||||||| |||| |||| |||||||||||| |||| |||||| | |||||||||    
T  46973277 ctcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttact 46973179  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    | |||   || | || |||||| ||||||||||||||||||    
T  46973178 tgtgtgtctcagcctaatgaaatgtgtcaacaacaattttc 46973138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 54 - 179
Target Start/End: Complemental strand, 13173889 - 13173765
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    |||||||||| |||||||||||| ||||||||| |||| |  | ||||||||||||||||| ||||||   |||||||||| ||| | || | |||||||    
T  13173889 gttttcctcggctgttaactgcagccggtttttgaattcccag-cagttaactgccgagggggcaaaatagtattttacttgtgtgcctcagccttatga 13173791  T
Q  154 aacgtgtcaacaacaattttcaaaaa 179  Q
    || |||||||||||||||||||||||    
T  13173790 aatgtgtcaacaacaattttcaaaaa 13173765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 34 - 133
Target Start/End: Original strand, 13178131 - 13178230
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||| | || |||||||||  | |||||||||| | ||||||| ||||||||  |||||||||||||||||||||||||| |||||||||    
T  13178131 ctcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattttact 13178230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 39 - 174
Target Start/End: Original strand, 41804037 - 41804172
Alignment:
Q  39 cagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgt 138  Q
    ||||||||||  || |||||||||| | ||||||||||  |||||||| |||| |||| |||||||||||||| || |||||| | |||||||||| |||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgt 41804136  T
Q  139 acatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
     | || | ||||| ||| ||||||||||||||||||    
T  41804137 gcctcagccttataaaatgtgtcaacaacaattttc 41804172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 35 - 171
Target Start/End: Original strand, 18975120 - 18975256
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  || |||||||||  | |||||||||| || ||| || |||| ||||||||||||| |||||||| |||||||| ||||||||||    
T  18975120 tcggcagttaactaccgaagttttcctctgcagttaactgcaaccagttattaaattcctcgacagttaaccgccgagggggcaaaaacgtattttactt 18975219  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
     ||||| || |  ||||  || |||||||||||||||    
T  18975220 gtgtacctcagctttatacaatgtgtcaacaacaatt 18975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 19054100 - 19053993
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| ||||||||| |||| |||| |||||||||| |||||| |||||||| |||||||||  |||   || | ||||||||| ||||||||||    
T  19054100 gttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgtttctcagccttatgaaatgtgtcaacaa 19054001  T
Q  167 caattttc 174  Q
    ||||||||    
T  19054000 caattttc 19053993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 42572723 - 42572836
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggttt-ttcaatttctcgaca 99  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||  || |    ||||||| |||||||||| ||||||| |||||  | ||||||    
T  42572723 agagagcttctgccagatttgtagcagaagatcctcggcagttaactaccgaggaaaacctcgacagttaactgcagccggtttcttcaaaat-tcgaca 42572821  T
Q  100 gttaactgccgaggg 114  Q
    |||||||| ||||||    
T  42572822 gttaactgtcgaggg 42572836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 133
Target Start/End: Original strand, 23276111 - 23276206
Alignment:
Q  38 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||| || |||||||||| | |||||||| | |||| |||| |||| |||  ||||||||||||||||| |||||||| |||||||||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttact 23276206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 29763185 - 29763232
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29763185 agagagcttctgccagatttgtagcagaagatcctcggcagttaacta 29763232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 49395710 - 49395663
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  49395710 agagagcttctgccagatttgtagcagaagatcctcggcagttaacta 49395663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 27487632 - 27487678
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||    
T  27487632 agagagcttctgccagatttgtagcagaagatcctcggcagttaact 27487678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 68 - 174
Target Start/End: Complemental strand, 35521654 - 35521548
Alignment:
Q  68 ttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaac 167  Q
    ||||||||| ||||||||| | || |||| ||||||||||||||| | |||||| | |||||||||| ||| | || | ||||| ||| |||||||||||    
T  35521654 ttaactgcagccggttttttatttcctcggcagttaactgccgagagggcaaaatcgtattttacttgtgtgcctcagccttataaaatgtgtcaacaac 35521555  T
Q  168 aattttc 174  Q
    |||||||    
T  35521554 aattttc 35521548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 49927467 - 49927649
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcgg------------cagttaactattgatgttttcctcgactgttaactgcatccggtttttca 88  Q
    ||||||||||| ||||||||||||||||||||||||||            ||||||||||  || ||||| |||| | |||||||  | ||||||||| |    
T  49927467 agagagcttctgccagatttgtagcagaagatcctcggtagttaactcgacagttaactaccgaggtttttctcggcagttaactatagccggtttttaa 49927566  T
Q  89 atttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatt 171  Q
    |||  ||| |||||||||||||||||  ||||||| |||||||||  |||   |||| | ||||||| |||||||||||||||    
T  49927567 attcttcggcagttaactgccgaggggacaaaaacgtattttactcgtgtttctcggccatatgaaatgtgtcaacaacaatt 49927649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 6434855 - 6434795
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcct 61  Q
    |||| |||||||||||||||||||||||||||||| ||||||||||||  || ||||||||    
T  6434855 agagtgcttctaccagatttgtagcagaagatccttggcagttaactaccgaagttttcct 6434795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 33 - 133
Target Start/End: Complemental strand, 11183261 - 11183161
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttac 132  Q
    ||||| ||||||||||  || |||||||||| | |||||||||| |||| |||| |||| |||  |||||||||| | ||||||||||||| ||||||||    
T  11183261 cctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtcaagggagcaaaaacgtattttac 11183162  T
Q  133 t 133  Q
    |    
T  11183161 t 11183161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 34 - 174
Target Start/End: Original strand, 21944379 - 21944519
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||| |||||||||| || |||||||||| |   |||||||| ||||||||| |||||||||||||||| ||  ||||||   |||||| ||||||| |    
T  21944379 ctcggtagttaactatcgaggttttcctcggcaactaactgcagccggtttttaaatttctcgacagttatctatcgaggggataaaaacgtattttatt 21944478  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    |||||    | | ||||||| | ||||||||||||||||||    
T  21944479 tatgtgtcccagccttatgatatgtgtcaacaacaattttc 21944519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 35 - 173
Target Start/End: Complemental strand, 26633600 - 26633465
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||||||||| ||||  |||  ||||||   ||||||| |||||| | ||||||||||    
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagttaa---ccgagggggcaaaagcgtattttactt 26633504  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
     ||| | ||   ||||||||| |||||||||||||||||    
T  26633503 gtgtgcctcaaccttatgaaatgtgtcaacaacaatttt 26633465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 67 - 174
Target Start/End: Complemental strand, 36908619 - 36908512
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| ||||||||| ||||  ||||||||||||||||||||  |||||||  |||||||||| ||| | ||   ||||| ||| |||||||||     
T  36908619 gttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgtgtcaacat 36908520  T
Q  167 caattttc 174  Q
    ||||||||    
T  36908519 caattttc 36908512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 35 - 178
Target Start/End: Complemental strand, 49924929 - 49924786
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||||||   |||| |||||||| | |||||||| | ||||||||| ||||| ||| ||||||| |||||| || |||||||| ||  |||||     
T  49924929 tcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactc 49924830  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaa 178  Q
     ||| | || | |||||| || ||||||||||||||| ||||||    
T  49924829 gtgtgcctcagccttatgcaatgtgtcaacaacaattctcaaaa 49924786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14174877 - 14174923
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  14174877 agagagcttctgccagatttttagcagaagatcctcggcagttaact 14174923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 54 - 164
Target Start/End: Original strand, 25040095 - 25040205
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatga 153  Q
    ||||||||||||  ||||||| | ||||||||  |||||||||||||||||||||||| ||  |||||   |||||||||| ||| | ||||  ||||||    
T  25040095 gttttcctcgacaattaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgtgcctcggctttatga 25040194  T
Q  154 aacgtgtcaac 164  Q
    || ||||||||    
T  25040195 aatgtgtcaac 25040205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 33 - 111
Target Start/End: Original strand, 35258870 - 35258948
Alignment:
Q  33 cctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||| || || ||||||||||  ||||||||||| |||| |||| |||| |||| ||||||||||||||    
T  35258870 cctcggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactgccga 35258948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 6562158 - 6562259
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || | |||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| | |||| | |||||||    
T  6562158 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 6562257  T
Q  132 ct 133  Q
    ||    
T  6562258 ct 6562259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 38 - 174
Target Start/End: Original strand, 19499115 - 19499249
Alignment:
Q  38 gcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatg 137  Q
    ||||||||| | ||| |||||||||| | |||||||||| |||  |||| ||||||||  |||||||||| ||||||  ||||||| |||||||||| ||    
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcgaggg--caaaaacgtattttacttgtg 19499212  T
Q  138 tacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    |   || ||||||||| | |||  |||||||||||||    
T  19499213 tgtctcagtcttatgatatgtgcgaacaacaattttc 19499249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 13636111 - 13636199
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    |||| ||||||||||||||||||||  || |||||||||| | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  13636111 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 13636199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 24 - 111
Target Start/End: Complemental strand, 19159707 - 19159619
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    |||||||||||||||||||||||||  || |||||||| | | |||||||||| |||| ||||||||  | ||| ||||||||||||||    
T  19159707 gcagaagatcctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccga 19159619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 35 - 175
Target Start/End: Complemental strand, 36072442 - 36072303
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    ||||||||||||||  || |||||||||| | |||||||||| ||| ||||||||||||||| ||| ||| | ||| | || ||||| | ||||||| ||    
T  36072442 tcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttcaatttctcggcagctaattaccg-gagaacaaaatcgtattttattt 36072344  T
Q  135 atgtacatcggtcttatgaaacgtgtcaacaacaattttca 175  Q
     ||| | |    ||||||||| |||||||||||||||||||    
T  36072343 gtgtgccttaaccttatgaaatgtgtcaacaacaattttca 36072303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 13147603 - 13147528
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgca 76  Q
    |||||| || ||||||||||||||||||||||| ||| ||||||||| | || ||||||||||   ||||||||||    
T  13147603 agagagtttttaccagatttgtagcagaagatcatcgacagttaactgtcgaggttttcctcggtagttaactgca 13147528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 34 - 177
Target Start/End: Original strand, 36076557 - 36076699
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||| ||||  || |||||||||| | |||||||||| ||||||||| |||| ||||   ||||||| |||| || | |||| | |||||||||    
T  36076557 ctcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggggtaaaa-cgtattttact 36076655  T
Q  134 tatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaa 177  Q
    | |||   || | ||||||||| ||||||||| |||||||||||    
T  36076656 tgtgtttctcagccttatgaaatgtgtcaacagcaattttcaaa 36076699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 35 - 122
Target Start/End: Complemental strand, 52802203 - 52802116
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaa 122  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||| | |||||||    
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaa 52802116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 67 - 133
Target Start/End: Complemental strand, 27485100 - 27485034
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||| |||| |||| |||| || | ||||||||||||||||| |||||||| |||||||||    
T  27485100 gttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttact 27485034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 133
Target Start/End: Original strand, 29709279 - 29709408
Alignment:
Q  3 agagcttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagtt 102  Q
    ||||||||| | |||||| ||||| |||||| | | ||||||||||||||  |||| |||  | |||||||||| | | ||||| ||||| || ||||||    
T  29709279 agagcttctgctagatttatagcaaaagatctttgacagttaactattgagatttttctcatcagttaactgcaacag-tttttgaatttttcaacagtt 29709377  T
Q  103 aactgccgagggagcaaaaacatattttact 133  Q
    |||||||||  |||||||||  |||||||||    
T  29709378 aactgccgaatgagcaaaaatgtattttact 29709408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 173
Target Start/End: Complemental strand, 42570159 - 42570077
Alignment:
Q  91 ttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaatttt 173  Q
    ||||||||||||||||| |||||  | |||| | | |||||||| ||| | || | |||||||||||||||||||||||||||    
T  42570159 ttctcgacagttaactgtcgaggatgtaaaatcgtgttttacttgtgtgcctcagccttatgaaacgtgtcaacaacaatttt 42570077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 32 - 114
Target Start/End: Original strand, 44470008 - 44470090
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    ||||||||||||||||   || |||||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||    
T  44470008 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggg 44470090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 26637222 - 26637259
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcgg 38  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  26637222 agagagcttctgccagatttgtagcagaagatcctcgg 26637259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 48751407 - 48751508
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || |||||||||| |  ||||||||| |||| |||| |||| |||| ||||| | ||||||||| | |||| | |||||||    
T  48751407 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtatttta 48751506  T
Q  132 ct 133  Q
    ||    
T  48751507 ct 48751508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 49426787 - 49426750
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaa 45  Q
    |||| |||||||||||||||||||||||||||||||||    
T  49426787 ttctgccagatttgtagcagaagatcctcggcagttaa 49426750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 32 - 116
Target Start/End: Complemental strand, 15047358 - 15047274
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggag 116  Q
    |||||||||||||||||  || |  ||||||| | |||||||||| |||| |||  |||| |||| |||||||||||||||||||    
T  15047358 tcctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggag 15047274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 35 - 123
Target Start/End: Original strand, 29438020 - 29438108
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaac 123  Q
    ||||||||||| ||  || ||||||||||   |||||||||| ||||||||| ||| | ||  ||||||||||||||||| ||||||||    
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaac 29438108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 54 - 114
Target Start/End: Original strand, 30910022 - 30910082
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||| | |||||||||| |||| |||  |||| ||||||||||||||||||||||    
T  30910022 gttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgaggg 30910082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 32 - 174
Target Start/End: Complemental strand, 38690007 - 38689866
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || |||||||| | | |||||||||| |||| |||  |||| ||||||| |||||| ||||||| | |||| | |||||||    
T  38690007 tcctcggcagttaactaccgaggttttccttggcagttaactgcagccgg-tttcgaattcctcgacatttaactaccgagggggtaaaagcgtatttta 38689909  T
Q  132 cttatgt-acatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    || |||| ||| | |  ||||| || ||||||||||||||||||    
T  38689908 ctcatgtgaca-cagctttatgcaatgtgtcaacaacaattttc 38689866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 34 - 108
Target Start/End: Complemental strand, 44336323 - 44336249
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 108  Q
    |||||||||||||||  || |||||||||| | |||||||||| |||  |||  |||| ||||||||||||||||    
T  44336323 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactgc 44336249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 35 - 133
Target Start/End: Original strand, 51289960 - 51290058
Alignment:
Q  35 tcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    ||||||| ||||||  || |||||||||| | |||||||||| |||| |||| |||| |||   |||||||||||||||| | |||| | |||||||||    
T  51289960 tcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccgagggggtaaaatcttattttact 51290058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 113
Target Start/End: Original strand, 3941147 - 3941228
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagg 113  Q
    |||||||||||||||||  || ||||||||||   |||||||||| || |||| | |||| |||| ||||||||||| ||||    
T  3941147 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccagtttatgaattcctcggcagttaactgcagagg 3941228  T

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Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 9711648 - 9711749
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||||||||||||||   || |||||||||| | |||||||||  |||| |||  |||| |||| ||||||||||| || || |||||| | |||||||    
T  9711648 tcctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtatttta 9711747  T
Q  132 ct 133  Q
    ||    
T  9711748 ct 9711749  T

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Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Original strand, 23359346 - 23359435
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaa 121  Q
    |||||||||||| ||||  || ||||||||||   |||||||||| |||| |||  |||| |||| || |||||||||||||| ||||||    
T  23359346 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaa 23359435  T

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Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 36908677 - 36908640
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcgg 38  Q
    ||||||||||| |||||||||||||||||| |||||||    
T  36908677 agagagcttctgccagatttgtagcagaagctcctcgg 36908640  T

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Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 114
Target Start/End: Complemental strand, 6557989 - 6557909
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||||||||||  ||  ||||||||| | |||||||||| |||  |||  |||| |||| |||||||||||||||||    
T  6557989 ctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccgaggg 6557909  T

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Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 174
Target Start/End: Complemental strand, 14172116 - 14172048
Alignment:
Q  106 tgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttc 174  Q
    ||||||||| |||||| | |||||||||| ||| | || | |||||| || ||||||||||||||||||    
T  14172116 tgccgagggggcaaaagcgtattttacttgtgtgcttcagccttatggaatgtgtcaacaacaattttc 14172048  T

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Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 45943723 - 45943799
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 108  Q
    |||||||||||||||||  || ||||||||||   ||||||| || ||||||| | |||| ||||||| ||||||||    
T  45943723 tcctcggcagttaactaccgaagttttcctcggtagttaactacagccggtttatgaattcctcgacaattaactgc 45943799  T

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Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 61 - 109
Target Start/End: Original strand, 51337539 - 51337587
Alignment:
Q  61 tcgactgttaactgcatccggtttttcaatttctcgacagttaactgcc 109  Q
    ||||| |||||||||| ||||||||| |||| |||| ||||||||||||    
T  51337539 tcgacagttaactgcagccggttttttaattcctcggcagttaactgcc 51337587  T

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Target: scaffold0192 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0192
Description:

Target: scaffold0192; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 80 - 175
Target Start/End: Complemental strand, 16439 - 16345
Alignment:
Q  80 ggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaacaattttca 175  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||||||| | | ||| | || ||||||||||| |||||||||| ||||||||    
T  16439 ggtttttcaatttctcgacagttaactaccgagggggcaaaaacatatttt-catgtgtgcctcagtcttatgaaatgtgtcaacaataattttca 16345  T

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Target: scaffold0192; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 18869 - 18912
Alignment:
Q  5 agcttctaccagatttgtagcagaagatcctcggcagttaacta 48  Q
    ||||||| ||||||||||||||||||||||||| ||||||||||    
T  18869 agcttctgccagatttgtagcagaagatcctcgacagttaacta 18912  T

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Target: scaffold1379 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 32 - 179
Target Start/End: Original strand, 431 - 578
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    ||||||| ||||||||   || |||||||||||| |||||||||| |||| || | ||||  ||| |||||||||||||||||||||||| | |||||||    
T  431 tcctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtatttta 530  T
Q  132 cttatgtacatcggtcttatgaaacgtgtcaacaacaattttcaaaaa 179  Q
    ||  |||   || ||||||| ||| |||| |||| ||||| |||||||    
T  531 ctcgtgtttctcagtcttatcaaatgtgtaaacatcaattctcaaaaa 578  T

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Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 12361 - 12434
Alignment:
Q  8 ttctaccagatttgtagcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg 81  Q
    |||| ||||||||||||||||||||||||||||||||||||  || |||||| ||| | |||||||||| ||||    
T  12361 ttctgccagatttgtagcagaagatcctcggcagttaactaccgaggttttcatcggcagttaactgcagccgg 12434  T

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Target: scaffold0618 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 54 - 134
Target Start/End: Complemental strand, 3939 - 3860
Alignment:
Q  54 gttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttactt 134  Q
    |||||||||| | |||||||||| ||| ||||| |||| ||||||||||||||||||||||  |||||| |||||||||||    
T  3939 gttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaa-atattttactt 3860  T

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Target: scaffold0092 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 54641 - 54558
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggga 115  Q
    |||||||||||||||| | ||||||||||||| | |||||||||| |||||| |||||  | | ||||||||| ||||||||||    
T  54641 tcctcggcagttaactgtcgatgttttcctcggcagttaactgcagccggttcttcaaaattttgacagttaattgccgaggga 54558  T

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Target: scaffold0341 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 17348 - 17449
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || | |||||||| | |||||||||| |||| |||  |||| |||| ||||||||||||||||| | |||| | |||||||    
T  17348 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 17447  T
Q  132 ct 133  Q
    ||    
T  17448 ct 17449  T

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Target: scaffold0116 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 32 - 120
Target Start/End: Original strand, 15952 - 16040
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaa 120  Q
    ||||||| |||||||||  || |||||||||| | |||||||||| | || |||  |||| |||| |||||||||||||||||||||||    
T  15952 tcctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccgagggagcaaa 16040  T

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Target: scaffold0176 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 903 - 857
Alignment:
Q  1 agagagcttctaccagatttgtagcagaagatcctcggcagttaact 47  Q
    ||||||||||| ||||||||||||  |||||||||||||||||||||    
T  903 agagagcttctgccagatttgtagaggaagatcctcggcagttaact 857  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 111
Target Start/End: Original strand, 36523 - 36611
Alignment:
Q  24 gcagaagatcctcggcagttaactattgatgttttcctcgactgttaactgcatccgg-tttttcaatttctcgacagttaactgccga 111  Q
    |||| ||||||||||||||||||||  || |||||||||| | ||||| |||| |||| ||||||||  | ||| ||||||||||||||    
T  36523 gcaggagatcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccga 36611  T

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Target: scaffold0388 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 67 - 174
Target Start/End: Original strand, 11742 - 11849
Alignment:
Q  67 gttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttacttatgtacatcggtcttatgaaacgtgtcaacaa 166  Q
    |||||||||| ||||||||| ||||  ||  |||||||||||||| || ||||||   |||||||||| ||||  ||  |||||| ||| |||||||||     
T  11742 gttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaagtgtattttacttgtgtatctcaatcttataaaatgtgtcaacag 11841  T
Q  167 caattttc 174  Q
    ||||||||    
T  11842 caattttc 11849  T

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Target: scaffold0219 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 57 - 107
Target Start/End: Complemental strand, 15754 - 15704
Alignment:
Q  57 ttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactg 107  Q
    ||||||| | |||||||||| ||||||||| |||| |||||||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactg 15704  T

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Target: scaffold0219; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 108
Target Start/End: Original strand, 20109 - 20185
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgc 108  Q
    ||||||||||| |||||  || | |||||||||| |||||||| | ||| ||||| |||| |||| |||||||||||    
T  20109 tcctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgc 20185  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 56 - 114
Target Start/End: Complemental strand, 232600 - 232542
Alignment:
Q  56 tttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgaggg 114  Q
    |||||||| | ||||||||||  ||| |||| |||| ||||||||||||||||||||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggg 232542  T

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Target: scaffold0494 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 133
Target Start/End: Complemental strand, 907 - 806
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || |||||||||| | ||||||| || |||  |||  |||| || | ||||||||||||||||| | |||| | |||||||    
T  907 tcctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtatttta 808  T
Q  132 ct 133  Q
    ||    
T  807 ct 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 133
Target Start/End: Original strand, 4397 - 4498
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatatttta 131  Q
    |||||||||||||||||  || | ||||||||    ||||||||| ||||  ||  |||| |||| ||||||||||||||||||| |||| | |||||||    
T  4397 tcctcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactgccgagggagtaaaatcgtatttta 4496  T
Q  132 ct 133  Q
    ||    
T  4497 ct 4498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 32 - 121
Target Start/End: Complemental strand, 22479 - 22390
Alignment:
Q  32 tcctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaa 121  Q
    |||||||||||||||||  ||  ||||||||  | |||||||||| |||  |||  |||| |||| ||||||||||||||||| ||||||    
T  22479 tcctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaa 22390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0360 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0360
Description:

Target: scaffold0360; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 34 - 138
Target Start/End: Original strand, 7303 - 7407
Alignment:
Q  34 ctcggcagttaactattgatgttttcctcgactgttaactgcatccggtttttcaatttctcgacagttaactgccgagggagcaaaaacatattttact 133  Q
    |||||||||||||||  || ||||| |||| | ||| | |||| ||||||||| |||| |||  || ||||||| | |||  ||||||||||||||||||    
T  7303 ctcggcagttaactaccgaggtttttctcggcagttgattgcagccggtttttgaattcctcagcaattaactgtcaaggaggcaaaaacatattttact 7402  T
Q  134 tatgt 138  Q
     ||||    
T  7403 catgt 7407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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