View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13979_low_4 (Length: 433)

Name: NF13979_low_4
Description: NF13979
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13979_low_4
NF13979_low_4
[»] chr6 (10 HSPs)
chr6 (1-433)||(31239819-31240251)
chr6 (258-348)||(24940514-24940602)
chr6 (250-377)||(10855914-10856036)
chr6 (2-87)||(31230908-31230993)
chr6 (323-383)||(6468733-6468793)
chr6 (332-412)||(12676344-12676424)
chr6 (320-413)||(19600097-19600189)
chr6 (368-411)||(3778669-3778711)
chr6 (319-385)||(30748167-30748233)
chr6 (323-359)||(31219106-31219142)
[»] chr7 (62 HSPs)
chr7 (222-411)||(12223553-12223742)
chr7 (258-428)||(19433772-19433941)
chr7 (218-396)||(8048653-8048831)
chr7 (218-433)||(7509304-7509518)
chr7 (305-425)||(43461577-43461697)
chr7 (224-425)||(43457539-43457730)
chr7 (259-359)||(48249675-48249775)
chr7 (310-433)||(48647295-48647418)
chr7 (311-433)||(7258424-7258546)
chr7 (259-396)||(6680402-6680539)
chr7 (227-403)||(32793256-32793432)
chr7 (224-404)||(5929990-5930174)
chr7 (311-433)||(44333286-44333408)
chr7 (311-433)||(10898925-10899047)
chr7 (305-411)||(33607368-33607474)
chr7 (310-412)||(44334323-44334425)
chr7 (311-428)||(48788529-48788646)
chr7 (317-433)||(10894498-10894613)
chr7 (333-433)||(42478122-42478222)
chr7 (311-433)||(48777406-48777528)
chr7 (311-433)||(35727847-35727969)
chr7 (311-433)||(48646198-48646319)
chr7 (218-326)||(12220099-12220206)
chr7 (221-412)||(8046895-8047085)
chr7 (319-410)||(24934954-24935045)
chr7 (224-412)||(39708185-39708379)
chr7 (311-433)||(45584349-45584470)
chr7 (311-412)||(7259558-7259658)
chr7 (333-412)||(30924882-30924961)
chr7 (311-433)||(42477529-42477651)
chr7 (320-405)||(2677094-2677179)
chr7 (311-412)||(35728959-35729060)
chr7 (225-348)||(34888840-34888963)
chr7 (218-287)||(10899051-10899120)
chr7 (347-424)||(12221486-12221563)
chr7 (340-412)||(385503-385574)
chr7 (339-411)||(46286700-46286772)
chr7 (317-419)||(33060976-33061078)
chr7 (366-412)||(45583798-45583844)
chr7 (330-391)||(8375497-8375558)
chr7 (317-386)||(24287655-24287724)
chr7 (218-286)||(7258351-7258419)
chr7 (222-290)||(13578296-13578363)
chr7 (223-287)||(45584474-45584538)
chr7 (308-404)||(44529172-44529271)
chr7 (317-414)||(384994-385090)
chr7 (319-411)||(39824306-39824395)
chr7 (222-287)||(7259662-7259727)
chr7 (222-287)||(42477460-42477525)
chr7 (218-295)||(48647413-48647490)
chr7 (234-290)||(33060902-33060958)
chr7 (218-323)||(33607557-33607670)
chr7 (316-427)||(46287245-46287353)
chr7 (221-279)||(8375569-8375627)
chr7 (320-414)||(24935564-24935657)
chr7 (238-412)||(34707697-34707870)
chr7 (222-287)||(35729064-35729129)
chr7 (334-391)||(44530511-44530568)
chr7 (218-287)||(48788650-48788719)
chr7 (318-386)||(8870906-8870974)
chr7 (330-414)||(12286778-12286861)
chr7 (238-290)||(44529124-44529176)
[»] chr1 (40 HSPs)
chr1 (218-415)||(22856756-22856951)
chr1 (223-433)||(22857410-22857621)
chr1 (219-411)||(3117726-3117918)
chr1 (218-433)||(6612495-6612701)
chr1 (221-428)||(51450080-51450286)
chr1 (283-410)||(25038022-25038149)
chr1 (283-410)||(25043234-25043361)
chr1 (218-412)||(34088322-34088516)
chr1 (279-433)||(51453571-51453720)
chr1 (311-412)||(32665642-32665744)
chr1 (319-433)||(52439618-52439732)
chr1 (311-412)||(9339795-9339896)
chr1 (311-419)||(9340891-9340999)
chr1 (218-419)||(6613833-6614026)
chr1 (317-411)||(11830064-11830158)
chr1 (339-433)||(32664680-32664773)
chr1 (311-412)||(7944304-7944405)
chr1 (333-433)||(52440412-52440512)
chr1 (331-412)||(16249832-16249913)
chr1 (317-414)||(26518264-26518361)
chr1 (330-403)||(34085710-34085783)
chr1 (312-390)||(44720722-44720800)
chr1 (218-390)||(50107078-50107250)
chr1 (316-391)||(1001325-1001400)
chr1 (319-433)||(5782551-5782665)
chr1 (310-392)||(7945447-7945529)
chr1 (226-292)||(52439559-52439625)
chr1 (258-387)||(8975275-8975404)
chr1 (317-385)||(1407803-1407871)
chr1 (330-414)||(39726538-39726621)
chr1 (317-405)||(39977507-39977595)
chr1 (224-287)||(9339728-9339791)
chr1 (218-295)||(7945524-7945601)
chr1 (372-415)||(5782998-5783041)
chr1 (225-284)||(10333069-10333128)
chr1 (319-386)||(44719527-44719594)
chr1 (218-287)||(10333164-10333233)
chr1 (330-387)||(29766111-29766168)
chr1 (218-287)||(32665748-32665817)
chr1 (237-290)||(33342511-33342564)
[»] chr8 (34 HSPs)
chr8 (219-433)||(5736919-5737133)
chr8 (258-412)||(5737876-5738030)
chr8 (281-419)||(28619398-28619536)
chr8 (218-428)||(5965279-5965489)
chr8 (257-419)||(30134681-30134843)
chr8 (257-411)||(41121220-41121374)
chr8 (271-427)||(32564347-32564503)
chr8 (311-433)||(32898297-32898419)
chr8 (319-433)||(35177551-35177665)
chr8 (317-412)||(39138517-39138612)
chr8 (222-414)||(45476414-45476606)
chr8 (311-412)||(1952843-1952944)
chr8 (311-433)||(10407436-10407558)
chr8 (311-433)||(35178657-35178779)
chr8 (223-359)||(28619070-28619207)
chr8 (310-403)||(41122624-41122717)
chr8 (311-419)||(10406355-10406463)
chr8 (229-386)||(28524845-28525002)
chr8 (339-411)||(32563773-32563845)
chr8 (267-391)||(33314983-33315107)
chr8 (222-287)||(32898423-32898488)
chr8 (222-287)||(35177475-35177540)
chr8 (332-390)||(9625380-9625438)
chr8 (218-392)||(45476238-45476412)
chr8 (218-287)||(1952948-1953017)
chr8 (317-401)||(2552189-2552272)
chr8 (234-390)||(28006471-28006626)
chr8 (234-390)||(28063774-28063929)
chr8 (317-404)||(8569563-8569650)
chr8 (330-396)||(2561354-2561420)
chr8 (330-384)||(28526425-28526479)
chr8 (222-287)||(35178783-35178847)
chr8 (317-385)||(9626341-9626409)
chr8 (229-289)||(10407560-10407620)
[»] chr4 (27 HSPs)
chr4 (218-411)||(19050314-19050505)
chr4 (224-428)||(4701847-4702049)
chr4 (224-411)||(39869002-39869188)
chr4 (234-433)||(4703049-4703248)
chr4 (238-412)||(20599759-20599933)
chr4 (222-404)||(39870535-39870717)
chr4 (311-412)||(42278198-42278299)
chr4 (257-391)||(44158619-44158753)
chr4 (229-387)||(21621910-21622068)
chr4 (319-412)||(47874720-47874813)
chr4 (311-433)||(47878336-47878458)
chr4 (256-405)||(56041078-56041223)
chr4 (317-413)||(42391758-42391854)
chr4 (334-411)||(53770944-53771021)
chr4 (218-397)||(26172808-26172989)
chr4 (317-414)||(38216621-38216716)
chr4 (334-433)||(54574597-54574696)
chr4 (221-287)||(50694828-50694894)
chr4 (222-287)||(42278129-42278194)
chr4 (317-412)||(25810285-25810381)
chr4 (319-405)||(26685324-26685410)
chr4 (225-279)||(48740006-48740060)
chr4 (319-384)||(2786400-2786465)
chr4 (376-433)||(42278855-42278912)
chr4 (330-411)||(53770481-53770562)
chr4 (222-279)||(53771035-53771092)
chr4 (381-427)||(19051213-19051256)
[»] chr2 (46 HSPs)
chr2 (218-425)||(17330079-17330277)
chr2 (271-403)||(43380696-43380828)
chr2 (218-411)||(17466683-17466875)
chr2 (229-415)||(7412179-7412365)
chr2 (257-413)||(39256871-39257029)
chr2 (234-411)||(33161859-33162037)
chr2 (218-433)||(7073715-7073922)
chr2 (223-419)||(33163304-33163500)
chr2 (311-433)||(32765086-32765208)
chr2 (219-396)||(17466118-17466295)
chr2 (311-433)||(39015154-39015276)
chr2 (218-394)||(34037544-34037720)
chr2 (275-411)||(43381045-43381181)
chr2 (311-433)||(24458209-24458331)
chr2 (223-349)||(31814260-31814386)
chr2 (311-412)||(14704154-14704255)
chr2 (311-428)||(40000192-40000309)
chr2 (218-405)||(21733631-21733818)
chr2 (330-405)||(21732283-21732358)
chr2 (339-433)||(2910277-2910371)
chr2 (311-433)||(24459306-24459428)
chr2 (311-433)||(31091379-31091501)
chr2 (333-418)||(31090328-31090413)
chr2 (311-412)||(39016256-39016357)
chr2 (317-426)||(31443084-31443193)
chr2 (311-426)||(2911346-2911461)
chr2 (330-426)||(5914871-5914967)
chr2 (330-426)||(12010227-12010323)
chr2 (229-387)||(34582548-34582706)
chr2 (223-411)||(38984844-38985031)
chr2 (319-405)||(12396162-12396248)
chr2 (317-426)||(33439396-33439504)
chr2 (229-385)||(37607189-37607345)
chr2 (218-295)||(31090240-31090317)
chr2 (258-390)||(14887373-14887505)
chr2 (218-287)||(2910176-2910245)
chr2 (321-414)||(12004848-12004941)
chr2 (317-414)||(28864662-28864759)
chr2 (317-414)||(31442506-31442603)
chr2 (330-390)||(18676698-18676758)
chr2 (258-385)||(26585194-26585318)
chr2 (317-387)||(18675259-18675328)
chr2 (320-420)||(12003745-12003845)
chr2 (222-287)||(31091505-31091570)
chr2 (386-427)||(31814214-31814255)
chr2 (314-402)||(11985843-11985930)
[»] chr3 (42 HSPs)
chr3 (222-412)||(20464149-20464339)
chr3 (311-433)||(48574311-48574433)
chr3 (319-433)||(55388216-55388330)
chr3 (310-433)||(55389321-55389444)
chr3 (260-392)||(612332-612464)
chr3 (318-423)||(33837319-33837424)
chr3 (218-412)||(36279028-36279202)
chr3 (311-433)||(17700668-17700790)
chr3 (311-433)||(36280169-36280291)
chr3 (311-433)||(48573134-48573256)
chr3 (311-433)||(48809507-48809629)
chr3 (330-411)||(47075245-47075326)
chr3 (311-412)||(48808521-48808622)
chr3 (311-412)||(52318190-52318291)
chr3 (310-419)||(53957821-53957930)
chr3 (311-427)||(53958958-53959074)
chr3 (319-428)||(19115024-19115133)
chr3 (301-427)||(2591764-2591891)
chr3 (319-405)||(33427888-33427974)
chr3 (319-412)||(47117945-47118037)
chr3 (319-411)||(47428457-47428549)
chr3 (319-410)||(19114670-19114760)
chr3 (324-411)||(45599046-45599133)
chr3 (333-411)||(45600833-45600911)
chr3 (218-398)||(3671114-3671287)
chr3 (353-431)||(17701783-17701861)
chr3 (218-287)||(36280295-36280364)
chr3 (339-410)||(40317947-40318018)
chr3 (234-412)||(36827328-36827506)
chr3 (222-279)||(45600925-45600982)
chr3 (330-411)||(47074828-47074909)
chr3 (218-279)||(47118037-47118098)
chr3 (330-405)||(3694000-3694075)
chr3 (218-284)||(2591703-2591769)
chr3 (225-287)||(52317062-52317124)
chr3 (222-292)||(55388153-55388223)
chr3 (330-411)||(33428329-33428410)
chr3 (218-279)||(49261523-49261584)
chr3 (396-432)||(8168539-8168575)
chr3 (311-359)||(34263954-34264002)
chr3 (221-293)||(50753896-50753968)
chr3 (223-287)||(53959078-53959142)
[»] scaffold0767 (2 HSPs)
scaffold0767 (222-419)||(5679-5874)
scaffold0767 (273-433)||(6085-6242)
[»] scaffold0039 (2 HSPs)
scaffold0039 (256-426)||(79187-79357)
scaffold0039 (218-298)||(79650-79730)
[»] chr5 (40 HSPs)
chr5 (223-412)||(9537103-9537292)
chr5 (311-433)||(2464818-2464940)
chr5 (310-433)||(32640436-32640559)
chr5 (218-359)||(9537955-9538096)
chr5 (311-433)||(8074599-8074721)
chr5 (311-433)||(28590964-28591087)
chr5 (311-433)||(14889918-14890040)
chr5 (218-433)||(18004714-18004925)
chr5 (311-433)||(25590579-25590701)
chr5 (311-433)||(40611409-40611531)
chr5 (311-433)||(40612511-40612633)
chr5 (311-429)||(544797-544915)
chr5 (311-433)||(2466625-2466747)
chr5 (311-429)||(8075689-8075807)
chr5 (261-406)||(18400297-18400442)
chr5 (314-420)||(34173432-34173538)
chr5 (311-412)||(545909-546010)
chr5 (237-402)||(16979087-16979252)
chr5 (311-419)||(14891013-14891121)
chr5 (333-433)||(28589870-28589970)
chr5 (229-353)||(30970497-30970621)
chr5 (333-395)||(4593031-4593093)
chr5 (256-350)||(27720832-27720925)
chr5 (311-412)||(4593974-4594075)
chr5 (250-382)||(32555430-32555561)
chr5 (222-287)||(4592941-4593006)
chr5 (317-400)||(578637-578720)
chr5 (330-405)||(16611876-16611951)
chr5 (330-411)||(19271530-19271612)
chr5 (339-413)||(32641599-32641673)
chr5 (320-385)||(13651041-13651106)
chr5 (319-398)||(12445284-12445363)
chr5 (223-289)||(546012-546078)
chr5 (350-412)||(2314387-2314449)
chr5 (317-383)||(37072733-37072799)
chr5 (218-287)||(14891125-14891194)
chr5 (218-287)||(19186198-19186267)
chr5 (258-411)||(21069405-21069557)
chr5 (222-287)||(32641704-32641769)
chr5 (221-289)||(8075809-8075877)
[»] scaffold0016 (1 HSPs)
scaffold0016 (339-410)||(36400-36471)
[»] scaffold0369 (1 HSPs)
scaffold0369 (317-411)||(8675-8768)
[»] scaffold0026 (1 HSPs)
scaffold0026 (373-414)||(92987-93028)


Alignment Details
Target: chr6 (Bit Score: 392; Significance: 0; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 392; E-Value: 0
Query Start/End: Original strand, 1 - 433
Target Start/End: Complemental strand, 31240251 - 31239819
Alignment:
Q  1 actaatgttgtggaaatcaacctgctacttcgtagggaagagctaatactctgatattaatgtatttatgatcatgaaacaatattatgtctagtagcta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  31240251 actaatgttgtggaaatcaacctgctacttcgtagagaagagctaatactctgatattaatgtatttatgatcatgaaacaatattttgtctagtagcta 31240152  T
Q  101 gtaatacatattcttctatactatactatataaagaaaagagtaaattgttatttagtacctgattcagcatctcgtagttataaaagtctctaacttaa 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||    
T  31240151 gtaatacatattcttctatactatactatataaagaaaagagtaaattgttatttagtacctgattcagcatctcgtagtcataaaagtctttaacttaa 31240052  T
Q  201 gattaaatatnnnnnnngtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttac 300  Q
    ||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31240051 gattaaatataaaaaaagtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttac 31239952  T
Q  301 gatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctca 400  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31239951 gatgacatgacatataaggtgtcacatgaactaaagtcaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctca 31239852  T
Q  401 aatccttaaatccctaaatctcaaatccttaaa 433  Q
    |||||||||||||||||||||||||||||||||    
T  31239851 aatccttaaatccctaaatctcaaatccttaaa 31239819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 258 - 348
Target Start/End: Original strand, 24940514 - 24940602
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaa 348  Q
    |||||||| ||| |||||||||||||||| ||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24940514 cgttaaataattatgttaagtgatgatgtcacacat--tttacgatgacatgacatataaggtgtcacatgaaataaagttaaagtagaaa 24940602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 250 - 377
Target Start/End: Original strand, 10855914 - 10856036
Alignment:
Q  250 gtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaa 349  Q
    ||||| |||||||||| ||| ||||||||||| ||||||||||  ||||||||||||||| ||||| ||||||||||     |||||| |||||||||||    
T  10855914 gtccctgacgttaaataattatgttaagtgatcatgtgacacaagttttacgatgacatggcatatgaggtgtcaca-----taaagtgaaagtagaaaa 10856008  T
Q  350 tggtcacttttgttcttgaaccaaaaat 377  Q
    || ||||||| || ||||||||| ||||    
T  10856009 tgttcactttagtccttgaaccataaat 10856036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 2 - 87
Target Start/End: Complemental strand, 31230993 - 31230908
Alignment:
Q  2 ctaatgttgtggaaatcaacctgctacttcgtagggaagagctaatactctgatattaatgtatttatgatcatgaaacaatatta 87  Q
    |||||| ||| ||| ||||||||| | || |||| ||||||  ||||||| |||||||||||||||||||||||||||||||||||    
T  31230993 ctaatgatgtagaattcaacctgccattttgtagtgaagagtcaatactccgatattaatgtatttatgatcatgaaacaatatta 31230908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 323 - 383
Target Start/End: Complemental strand, 6468793 - 6468733
Alignment:
Q  323 cacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatat 383  Q
    |||||| | |||||| ||||||||||||| ||| ||| |||||||||||||||||||||||    
T  6468793 cacatggattaaagtgaaagtagaaaatgatcaatttggttcttgaaccaaaaatcaatat 6468733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 332 - 412
Target Start/End: Complemental strand, 12676424 - 12676344
Alignment:
Q  332 taaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||||||| |||||||| |||||||| || | | |||| ||||| ||||| | ||||||||||||||||||| ||||||    
T  12676424 taaagttaaattagaaaattgtcactttagtccctaaaccgaaaattaatatacacaaattgaatctcaaatccctaaatc 12676344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 413
Target Start/End: Complemental strand, 19600189 - 19600097
Alignment:
Q  320 tgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcc 413  Q
    ||||||| | |||||||| |||||||||||||||||| |||| || | || | ||||| |||||||| ||||||||||||| || | |||||||    
T  19600189 tgtcacagggactaaagtgaaagtagaaaatggtcac-tttggtcctaaatcgaaaattaatatccctaaattgaatctcagattcctaaatcc 19600097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 368 - 411
Target Start/End: Complemental strand, 3778711 - 3778669
Alignment:
Q  368 aaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||||||||||| |||||||||||||||||||||||| |||||    
T  3778711 aaccaaaaatcaa-atccccaaattgaatctcaaatccataaat 3778669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 385
Target Start/End: Original strand, 30748167 - 30748233
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcc 385  Q
    |||||||| | |||||||| |||||| |||||||||| ||| || | |||| |||||||||||||||    
T  30748167 gtgtcacagggactaaagtgaaagtaaaaaatggtcaatttggtccctgaatcaaaaatcaatatcc 30748233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 323 - 359
Target Start/End: Complemental strand, 31219142 - 31219106
Alignment:
Q  323 cacatgaactaaagttaaagtagaaaatggtcacttt 359  Q
    |||||| |||||||| |||||||||||||||||||||    
T  31219142 cacatggactaaagtgaaagtagaaaatggtcacttt 31219106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 110; Significance: 3e-55; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 222 - 411
Target Start/End: Complemental strand, 12223742 - 12223553
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtg 321  Q
    ||||||||||| ||||||||| | ||| ||| | || ||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||| || ||    
T  12223742 ctgactctgcagttccgttattactttagtcactgatgttaaataattctgttaagtgatgatgtgacacaggttttacgatgacatgacatatgagttg 12223643  T
Q  322 tcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||| |||||||||| |||||| ||||| ||||||||  | |||||||||||||||||||||||||||||||||||||||||| |||||    
T  12223642 tcacaggaactaaagtgaaagtaaaaaattgtcactttgatccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaat 12223553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 258 - 428
Target Start/End: Complemental strand, 19433941 - 19433772
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcact 357  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||| | | |||| | | | ||||||| | |||||||||||||||| |    
T  19433941 cgttaaataattctgttaagtgatgatgtgacacatattttacgatgacatgacatctgatgtgtgagagggactaaag-tgaagtagaaaatggtcatt 19433843  T
Q  358 tttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatcc 428  Q
    || |||| ||||| |||||||||||||||||||||||||||| |||||  || |||| |||||| ||||||    
T  19433842 ttggttcctgaactaaaaatcaatatccccaaattgaatctctaatccccaactcccaaaatctgaaatcc 19433772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 218 - 396
Target Start/End: Complemental strand, 8048831 - 8048653
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||| ||||||||| ||||||||||| |||  ||    ||||||||| ||||| ||||||||||||||| ||||| || ||||||||||| |||||| |    
T  8048831 gtctccgactctgcacttccgttatcactttaatctttaacgttaaataattctattaagtgatgatgtgtcacatgttatacgatgacataacatatga 8048732  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaat 396  Q
     |||||||||| |||||||| ||||||||||||||||||||| || | |||||| ||||| ||||||| ||||||||||    
T  8048731 tgtgtcacatggactaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaattaatatccacaaattgaat 8048653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 8e-34
Query Start/End: Original strand, 218 - 433
Target Start/End: Complemental strand, 7509518 - 7509304
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||| || |||||| ||||||||| | |||   ||| |||||||||| ||| ||||||||||| |||||  ||||  |  |||||||||||  |||| |    
T  7509518 gtctcagattctgcacttccgttattactttaacccctgacgttaaataattttgttaagtgattatgtggtacatcat--acgatgacatggaatatga 7509421  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaa-tggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
     |||||| ||| |||||||| ||||||||||| | |||||||| || | | |||||||||||||||||||||||||||||||||||||| |||| |||||    
T  7509420 tgtgtcatatggactaaagtgaaagtagaaaaatagtcactttggtccctaaaccaaaaatcaatatccccaaattgaatctcaaatccctaaaccccta 7509321  T
Q  417 aatctcaaatccttaaa 433  Q
    |||||||||||| ||||    
T  7509320 aatctcaaatccctaaa 7509304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 305 - 425
Target Start/End: Complemental strand, 43461697 - 43461577
Alignment:
Q  305 acatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatc 404  Q
    ||||| ||||| ||||||||||||||||||||| |||||| ||||||||||||||  | | |||||||||||||||||||||  ||||||||||||||||    
T  43461697 acatggcatatgaggtgtcacatgaactaaagtgaaagtaaaaaatggtcactttgatccctgaaccaaaaatcaatatccctcaattgaatctcaaatc 43461598  T
Q  405 cttaaatccctaaatctcaaa 425  Q
    | |||||| ||||||||||||    
T  43461597 cctaaatcactaaatctcaaa 43461577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 224 - 425
Target Start/End: Original strand, 43457539 - 43457730
Alignment:
Q  224 gactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtc 323  Q
    ||||||||| ||||||||||| ||| || |  |||||||| | ||||||||||||||||||||||||||  |         ||||| ||||| |||||||    
T  43457539 gactctgcacttccgttatcactttagttcatgacgttaagttattctgttaagtgatgatgtgacacagtt---------acatggcatatgaggtgtc 43457629  T
Q  324 acatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctca 423  Q
    |||   |||||||| |||||| |||||||||||||| || | ||| ||||||||||||||||| ||||||||||||||||||||||||| | ||||||||    
T  43457630 acagagactaaagtgaaagtaaaaaatggtcactttggtccctga-ccaaaaatcaatatccctaaattgaatctcaaatccttaaatcaccaaatctca 43457728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 259 - 359
Target Start/End: Original strand, 48249675 - 48249775
Alignment:
Q  259 gttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcactt 358  Q
    ||||||| ||| |||||||||||||||||||||| |||||||||||| ||| ||||| ||||||||||||||||||||| |||||||| |||||||||||    
T  48249675 gttaaataattatgttaagtgatgatgtgacacaaattttacgatgatatgtcatatgaggtgtcacatgaactaaagtaaaagtagagaatggtcactt 48249774  T
Q  359 t 359  Q
    |    
T  48249775 t 48249775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 310 - 433
Target Start/End: Complemental strand, 48647418 - 48647295
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    |||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| ||||||||||||  ||||||| ||     
T  48647418 acatatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttcgtccctgaaccaaaaatcaatatgcccaaattgaataccaaatccctat 48647319  T
Q  410 atccctaaatctcaaatccttaaa 433  Q
    |||||||||||| |||||||||||    
T  48647318 atccctaaatcttaaatccttaaa 48647295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 7258424 - 7258546
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| |||||| | ||||    
T  7258424 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 7258523  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  7258524 tccttaaatctcaaatccctaaa 7258546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 259 - 396
Target Start/End: Complemental strand, 6680539 - 6680402
Alignment:
Q  259 gttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcactt 358  Q
    ||||||| ||||||||||||| |||||||||| | |||||||||||||||||||  | | |||||| | | |||||||| |||||||||||| |||| ||    
T  6680539 gttaaataattctgttaagtgctgatgtgacataaattttacgatgacatgacaattgatgtgtcaaagggactaaagtgaaagtagaaaatagtcattt 6680440  T
Q  359 ttgttcttgaaccaaaaatcaatatccccaaattgaat 396  Q
    | || | | |||||||||||||||||||||||||||||    
T  6680439 tagtccctaaaccaaaaatcaatatccccaaattgaat 6680402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 403
Target Start/End: Original strand, 32793256 - 32793432
Alignment:
Q  227 tctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcaca 326  Q
    |||||||||| ||||||| ||| |||   | |||||||| ||| |||||| |||||||||| ||||  |||||| |||||||||||| | ||||||||||    
T  32793256 tctgcatttcggttatcactttagtctttggcgttaaataattatgttaactgatgatgtggcacacgttttacaatgacatgacatgtgaggtgtcaca 32793355  T
Q  327 tgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaat 403  Q
    || |||||||| |||||| |||||| ||| ||| || | |||| ||||||| |||||||| ||| ||||||||||||    
T  32793356 tggactaaagtgaaagtaaaaaatgatcattttggtccctgaatcaaaaatgaatatccctaaaatgaatctcaaat 32793432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 224 - 404
Target Start/End: Complemental strand, 5930174 - 5929990
Alignment:
Q  224 gactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatata----agg 319  Q
    |||| |||| ||||||||||| ||| ||||| | | |||||| ||||||||||||||||||||| ||||  |||||||||| | |||||||||    |||    
T  5930174 gactgtgcacttccgttatcactttagtccctgccattaaataattctgttaagtgatgatgtggcacaggttttacgatgtcgtgacatatatatgagg 5930075  T
Q  320 tgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatc 404  Q
    ||||||||  |||||||| |||||  |||||| |||||||  | | || | ||||||||||||| ||||||||||||||||||||    
T  5930074 tgtcacatagactaaagtgaaagttaaaaatgatcactttgatccctggatcaaaaatcaatattcccaaattgaatctcaaatc 5929990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 44333286 - 44333408
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || || || ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| |||||| | ||||    
T  44333286 catatgaggtgtcacagggaccaacgtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 44333385  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  44333386 tccttaaatctcaaatccctaaa 44333408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 10899047 - 10898925
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||  ||||||||||||||||||||| || |||||||||||||||||||| |||||||||||| |||||| | ||||    
T  10899047 catatgaggtgtcacagggaccaaagagaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 10898948  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | | || ||||||||||| ||||    
T  10898947 ttcttacatctcaaatccctaaa 10898925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 305 - 411
Target Start/End: Complemental strand, 33607474 - 33607368
Alignment:
Q  305 acatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatc 404  Q
    ||||| ||||| |||||||| ||| |||||||| |||||| ||| |||||||||| || |||| |||||||||||||||||||||||||||||| |||||    
T  33607474 acatggcatatgaggtgtcaaatggactaaagtgaaagtaaaaattggtcactttggtccttggaccaaaaatcaatatccccaaattgaatcttaaatc 33607375  T
Q  405 cttaaat 411  Q
    | |||||    
T  33607374 cctaaat 33607368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 310 - 412
Target Start/End: Complemental strand, 44334425 - 44334323
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    |||||| || ||||||||| || ||||| |||||||||||| |||||||| || | ||||||||||||||||||||||||||||||| |||||||| |||    
T  44334425 acatatgagatgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaa 44334326  T
Q  410 atc 412  Q
    |||    
T  44334325 atc 44334323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 48788646 - 48788529
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| | |||||||||| |||||| | ||||    
T  48788646 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcacaaattgaatatcaaattcctaaa 48788547  T
Q  411 tccctaaatctcaaatcc 428  Q
    | | ||||||||||||||    
T  48788546 ttcttaaatctcaaatcc 48788529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 317 - 433
Target Start/End: Original strand, 10894498 - 10894613
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
    |||||||||||| || ||||| ||||||||||||||||||||| || | || |||||||||| ||||||||||||||||| |||||||| |||||||  |    
T  10894498 aggtgtcacatgcaccaaagtgaaagtagaaaatggtcactttagtccctggaccaaaaatc-atatccccaaattgaatatcaaatccctaaatccgaa 10894596  T
Q  417 aatctcaaatccttaaa 433  Q
    ||||| |||| ||||||    
T  10894597 aatcttaaattcttaaa 10894613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 42478222 - 42478122
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaa 432  Q
    ||||| ||||||||||||||||||||| || | ||||| |||||||||||||||| |||||||| |||||||| |||| || ||||||| ||||||||||    
T  42478222 aaagtgaaagtagaaaatggtcactttggtccatgaacaaaaaatcaatatcccctaattgaatatcaaatccctaaacccataaatcttaaatccttaa 42478123  T
Q  433 a 433  Q
    |    
T  42478122 a 42478122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 48777406 - 48777528
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa-ttgaatctcaaatccttaa 409  Q
    ||||| |||||||||| | || ||||| ||| |||||||||||||||||  ||| |||||||||| |||||||||||||| |||||| |||||||| |||    
T  48777406 catatgaggtgtcacagggaccaaagtgaaaatagaaaatggtcactttgattcctgaaccaaaa-tcaatatccccaaaattgaatttcaaatccctaa 48777504  T
Q  410 atccctaaatctcaaatccttaaa 433  Q
    |||||||||| | |||||||||||    
T  48777505 atccctaaattttaaatccttaaa 48777528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 35727847 - 35727969
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| | |||||||||||||||||||  | ||| |||||||||||||||| |||||||||||| ||||||   ||||    
T  35727847 catatgaggtgtcacagggaccaaagtgatagtagaaaatggtcactttgatcctttaaccaaaaatcaatattcccaaattgaatatcaaatttctaaa 35727946  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | |||||||||||||||| ||||    
T  35727947 ttcctaaatctcaaatccctaaa 35727969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 48646198 - 48646319
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||||||||||||||   || ||||| |||||| |||||||||||||| || |||||||||||||| |||||  | ||||||||| |||||| | ||||    
T  48646198 catataaggtgtcacagagaccaaagtgaaagtaaaaaatggtcacttt-gtccttgaaccaaaaattaatatttctaaattgaatatcaaattcctaaa 48646296  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    |||||||||||||||||| ||||    
T  48646297 tccctaaatctcaaatccctaaa 48646319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 218 - 326
Target Start/End: Original strand, 12220099 - 12220206
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| ||| | ||||| ||| |||   |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |    
T  12220099 gtctctgactctgcacttctgatatcactttagtctt-gacgttaaataattttgttaagtgatgatgtgacacatgttttacgatgacatgacatatca 12220197  T
Q  318 ggtgtcaca 326  Q
    |||| ||||    
T  12220198 ggtgacaca 12220206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 221 - 412
Target Start/End: Original strand, 8046895 - 8047085
Alignment:
Q  221 tctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggt 320  Q
    ||||||||| ||||| ||||| |||||| |||   ||| |||||| ||| ||||||||||| ||||||||||| || |||||||| ||| ||||| | ||    
T  8046895 tctgactctacatttgcgttaacattttagtcattgacattaaataattatgttaagtgataatgtgacacatgttatacgatgatatgtcatatgatgt 8046994  T
Q  321 gtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
     ||| |   |||||| | |||||||||||| ||||||||  | ||||||| || ||| |||||||||||||||||| | |||||| ||||||    
T  8046995 atca-agagactaaattgaaagtagaaaatagtcactttgatccttgaacaaacaattaatatccccaaattgaattttaaatccctaaatc 8047085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 24934954 - 24935045
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||||||||||||||||| |||||||||||||||||||||  | | | |||| ||||||||||| || |||||||||||||||||| ||||    
T  24934954 gtgtcacatgaactaaagtgaaagtagaaaatggtcactttgatccctaaaccgaaaatcaatattcctaaattgaatctcaaatccctaaa 24935045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 224 - 412
Target Start/End: Original strand, 39708185 - 39708379
Alignment:
Q  224 gactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacat------ataa 317  Q
    |||| |||| ||||||||||| ||| ||||  || ||||||| ||| ||||| ||||| ||||||||||| || ||| ||||||| ||||      || |    
T  39708185 gactttgcacttccgttatcactttagtccgtgatgttaaataattatgttatgtgataatgtgacacatgttatacaatgacataacattaacatatga 39708284  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
     |||||||||| |||  ||| ||||||||||||||||||||| |  | | |||||||||||||||| | |||||||||| |||||||| ||||||    
T  39708285 tgtgtcacatggactgtagtgaaagtagaaaatggtcactttggaccctaaaccaaaaatcaatattctcaaattgaatttcaaatccctaaatc 39708379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 45584470 - 45584349
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| || |||||||||||||||||| || | |||||||||| ||||||| |||||||||||| |||||| | ||||    
T  45584470 catatgaggtgtcataaggaccaaagtgaatgtagaaaatggtcactttggtccctgaaccaaaa-tcaatattcccaaattgaatatcaaattcctaaa 45584372  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  45584371 tccttaaatctcaaatccctaaa 45584349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 7259658 - 7259558
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||| ||||||||||||||||| || | |||||||||||| |||||||||||||||||| |||||||| ||||    
T  7259658 catatgaggtgtcacaaggaccaaagtgaaa-tagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccctaaa 7259560  T
Q  411 tc 412  Q
    ||    
T  7259559 tc 7259558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 333 - 412
Target Start/End: Complemental strand, 30924961 - 30924882
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttct-tgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    ||||| ||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  30924961 aaagtgaaagtagaaaatggtcacttt-gatctatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 30924882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 42477529 - 42477651
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||| ||||||| || | |||||||||||  ||||| |||| ||||||| |||||| | ||||    
T  42477529 catatgaggtgtcacagggaccaaagtgaaagtagaaaatgatcactttggtccctgaaccaaaaactaatattcccatattgaatatcaaattcctaaa 42477628  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | | |||||||||||||| ||||    
T  42477629 tacttaaatctcaaatccctaaa 42477651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 405
Target Start/End: Original strand, 2677094 - 2677179
Alignment:
Q  320 tgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    ||||||||| |||||||| ||||||||||||| |||||||  | | ||||| ||||||||||||||| ||||| ||||||||||||    
T  2677094 tgtcacatggactaaagtgaaagtagaaaatgatcactttgttccctgaactaaaaatcaatatccctaaattaaatctcaaatcc 2677179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 35729060 - 35728959
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||| | ||| || ||||| |||||||||| |||||||||| || | |||||||||||||||||| |||||||||||| | |||||| ||||    
T  35729060 catatgaggtgttatatggaccaaagtgaaagtagaaagtggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatattaaatccctaaa 35728961  T
Q  411 tc 412  Q
    ||    
T  35728960 tc 35728959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 225 - 348
Target Start/End: Complemental strand, 34888963 - 34888840
Alignment:
Q  225 actctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtca 324  Q
    |||||||| ||||||||||| ||| ||||  |||||| ||| ||| ||||||||||||| |||||| |  ||||||||||| ||  ||||| ||||||||    
T  34888963 actctgcacttccgttatcactttagtccttgacgtttaataattatgttaagtgatgacgtgacataggttttacgatgatatagcatatgaggtgtca 34888864  T
Q  325 catgaactaaagttaaagtagaaa 348  Q
    |||| |||| ||| ||| ||||||    
T  34888863 catggactacagtgaaattagaaa 34888840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 10899120 - 10899051
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  10899120 gtctctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 10899051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 347 - 424
Target Start/End: Original strand, 12221486 - 12221563
Alignment:
Q  347 aaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaa 424  Q
    ||||||||| ||| || | ||||||||| ||||||||||||||||||||| ||||||   ||||||||||||||||||    
T  12221486 aaatggtcaatttggtccctgaaccaaagatcaatatccccaaattgaatatcaaatttctaaatccctaaatctcaa 12221563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 340 - 412
Target Start/End: Complemental strand, 385574 - 385503
Alignment:
Q  340 aagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||||||||||||||||| || | |||||| ||| ||||||| ||||| ||||||||||||||||||||||    
T  385574 aagtagaaaatggtcactttagtccctgaaccgaaagtcaatat-cccaagttgaatctcaaatccttaaatc 385503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 411
Target Start/End: Original strand, 46286700 - 46286772
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||||||| ||||||||  | |||||||||||||||||||| |||||||| ||| |||||||| |||||    
T  46286700 aaagtagaaaatagtcactttgatccttgaaccaaaaatcaatattcccaaattaaatttcaaatccctaaat 46286772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 419
Target Start/End: Original strand, 33060976 - 33061078
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
    |||||||||| ||| |||| | |||| ||||||| ||| |||| || ||| ||| |||||||||| |||| | |||||||||||||||| ||||||| ||    
T  33060976 aggtgtcacaagaaataaaatgaaagcagaaaattgtcgctttggtccttaaactaaaaatcaatttccctagattgaatctcaaatccctaaatccata 33061075  T
Q  417 aat 419  Q
    |||    
T  33061076 aat 33061078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 366 - 412
Target Start/End: Original strand, 45583798 - 45583844
Alignment:
Q  366 tgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||    
T  45583798 tgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaatc 45583844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 330 - 391
Target Start/End: Complemental strand, 8375558 - 8375497
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaat 391  Q
    |||||||| ||||||||||||||||||||| || | | ||||||||||||||||||| ||||    
T  8375558 actaaagtgaaagtagaaaatggtcactttagtccctaaaccaaaaatcaatatccctaaat 8375497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 24287655 - 24287724
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccc 386  Q
    |||||||||| | |||||||| |||||||||||||||| |||| || | |||||||||||| ||||||||    
T  24287655 aggtgtcacagggactaaagtgaaagtagaaaatggtcgctttagtccctgaaccaaaaatgaatatccc 24287724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 286
Target Start/End: Original strand, 7258351 - 7258419
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgt 286  Q
    ||||||||||||||| ||| ||||||| ||| ||||| |||||||||  | ||||||||||||||||||    
T  7258351 gtctctgactctgcacttctgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgt 7258419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 222 - 290
Target Start/End: Complemental strand, 13578363 - 13578296
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgaca 290  Q
    ||||||||||| ||||||||||| ||| ||||  |||||||||| ||| ||||||||||||||||||||    
T  13578363 ctgactctgcacttccgttatcactttagtcct-gacgttaaataattatgttaagtgatgatgtgaca 13578296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 45584538 - 45584474
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  45584538 tgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 45584474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 308 - 404
Target Start/End: Original strand, 44529172 - 44529271
Alignment:
Q  308 tgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaa----aaatcaatatccccaaattgaatctcaaat 403  Q
    |||||||| |||||||||| | |||||||| |||||| ||||||||||||||    | ||||||||    |||||||||||| |||||||||||||||||    
T  44529172 tgacatatgaggtgtcacaaggactaaagtgaaagta-aaaatggtcactttgacccctgaaccaattaaaaatcaatatcctcaaattgaatctcaaat 44529270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 414
Target Start/End: Original strand, 384994 - 385090
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttct-tgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    ||||||||| |  |||||||| |||||||||||| ||||| |||| ||| |||| | ||||||||||| |||||||| |||||||||| ||||||||||    
T  384994 aggtgtcacgttgactaaagtgaaagtagaaaattgtcac-tttgatctatgaatcgaaaatcaatat-cccaaattaaatctcaaattcttaaatccc 385090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 411
Target Start/End: Original strand, 39824306 - 39824395
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||| | |||||||| ||||||||||||||||||||| |  | |||   | |||||||||| |||||||||||| |||||||| |||||    
T  39824306 gtgtcacagggactaaagtgaaagtagaaaatggtcactttagcccctga---ataaatcaatattcccaaattgaatttcaaatccataaat 39824395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 7259727 - 7259662
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||||||| || ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  7259727 ctgactctacacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 7259662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 42477460 - 42477525
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| |||||||||||||||  |||| |||||||||  | | |||||||||||||||||    
T  42477460 ctgactctgcacttccgttatcattttaatccctgacgttaaaaaaatatgttaagtgatgatgtg 42477525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 48647490 - 48647413
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatat 295  Q
    |||||| |||||||| ||  ||||||| ||| ||||| |||||||||  | |||||||||||||||| ||||||||||    
T  48647490 gtctctcactctgcacttttgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatttgacacatat 48647413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 290
Target Start/End: Original strand, 33060902 - 33060958
Alignment:
Q  234 ttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgaca 290  Q
    ||||||||||| ||| ||| | |||||||||| |||||||||| |||||||||||||    
T  33060902 ttccgttatcactttagtctctgacgttaaataattctgttaaatgatgatgtgaca 33060958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 218 - 323
Target Start/End: Complemental strand, 33607670 - 33607557
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattc--------tgttaagtgatgatgtgacacatattttacgatgacatg 309  Q
    |||||||| |||||| ||||||||||||||| | ||| |||||||||| |||         ||||||||||||||||||||||  |||||||| |||||     
T  33607670 gtctctgattctgcacttccgttatcattttagaccctgacgttaaataattaaataattatgttaagtgatgatgtgacacaggttttacgaagacatt 33607571  T
Q  310 acatataaggtgtc 323  Q
     ||||| |||||||    
T  33607570 gcatatgaggtgtc 33607557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 316 - 427
Target Start/End: Complemental strand, 46287353 - 46287245
Alignment:
Q  316 aaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccct 415  Q
    |||||||| || | || ||||| |||||||||| | |||||||| || | | || ||||||||||||| || ||||||||||  |||||| ||||||| |    
T  46287353 aaggtgtcccagggaccaaagtgaaagtagaaa-tagtcactttagtccctaaatcaaaaatcaatattcctaaattgaatc--aaatccctaaatcctt 46287257  T
Q  416 aaatctcaaatc 427  Q
    ||||||||||||    
T  46287256 aaatctcaaatc 46287245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 221 - 279
Target Start/End: Complemental strand, 8375627 - 8375569
Alignment:
Q  221 tctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtg 279  Q
    |||||||||||| ||||||||||| ||| ||||  |||||||||| ||| |||||||||    
T  8375627 tctgactctgcacttccgttatcaatttagtccgcgacgttaaataattttgttaagtg 8375569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 414
Target Start/End: Complemental strand, 24935657 - 24935564
Alignment:
Q  320 tgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    ||||||| | |||||||| |||||| ||||  ||||||||  | | ||||| |||||||| |||| |||||||||||||||||| | ||||||||    
T  24935657 tgtcacaaggactaaagtgaaagtaaaaaaatgtcactttgatccctgaactaaaaatca-tatcaccaaattgaatctcaaattcctaaatccc 24935564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 412
Target Start/End: Original strand, 34707697 - 34707870
Alignment:
Q  238 gttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagt 337  Q
    ||||||| ||| ||| | |||||||||| ||| |||||| |||| ||||  ||||  || |||||||||| |  || | | |||||||| | | ||||||    
T  34707697 gttatcactttagtctctgacgttaaataattttgttaaatgataatgttgcacaggttatacgatgacaggg-atttgatgtgtcacagggaataaagt 34707795  T
Q  338 taaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
     ||| |||||||||  ||||||  | | || ||||||||| ||||||||||| |||||| |||||||| ||||||    
T  34707796 gaaaatagaaaatgaacactttgttccatggaccaaaaattaatatccccaagttgaatttcaaatccctaaatc 34707870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 35729129 - 35729064
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||| ||||| | | ||||| ||| |||||| | |||||||||||||||||||    
T  35729129 ctgactctgcacttccgctatcactgtagtccctgacattaaataaatctgttaagtgatgatgtg 35729064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 44530568 - 44530511
Alignment:
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaat 391  Q
    |||| |||||| ||| |||||||||| || | |||||||||||| |||||||||||||    
T  44530568 aagtgaaagtaaaaactggtcactttagtccctgaaccaaaaattaatatccccaaat 44530511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 48788719 - 48788650
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||||||| ||||||||||| ||| ||| | |||||||||  | | ||||| |||||||||||    
T  48788719 gtctctgactctgcacttccgttatcactttagtctctgacgttaaaaaaatttgttaggtgatgatgtg 48788650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 386
Target Start/End: Complemental strand, 8870974 - 8870906
Alignment:
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccc 386  Q
    |||||||||  ||||||| | ||||||||||||||| ||||| || | ||||| ||||||| |||||||    
T  8870974 ggtgtcacaaaaactaaaatgaaagtagaaaatggttactttggtccctgaactaaaaatcgatatccc 8870906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 330 - 414
Target Start/End: Original strand, 12286778 - 12286861
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    ||||| || |||||| |||||| ||||||| |||  | || |||||||||||||| ||||||| |||||||||||  ||||||||    
T  12286778 actaaggtgaaagtataaaatg-tcactttagttgctaaatcaaaaatcaatatctccaaattaaatctcaaatctctaaatccc 12286861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 44529124 - 44529176
Alignment:
Q  238 gttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgaca 290  Q
    ||||||| ||| ||||| |||||||||| ||| ||||||| ||||||||||||    
T  44529124 gttatcactttagtccctgacgttaaataattttgttaagcgatgatgtgaca 44529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 107; Significance: 2e-53; HSPs: 40)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 218 - 415
Target Start/End: Original strand, 22856756 - 22856951
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||||| |||||||| ||||||||||| ||| ||| | |||||||||| ||| ||||||||||| |||||||||| |||||||||||||||| ||||| |    
T  22856756 gtctctaactctgcacttccgttatcactttagtctccgacgttaaataattatgttaagtgattatgtgacacaaattttacgatgacatggcatatga 22856855  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccct 415  Q
    |||||||||   |||||||| ||||||||||||| ||||||| |||| |||||||||| ||||||||| ||||||||||||||||||||| |||||||    
T  22856856 ggtgtcaca--gactaaagtgaaagtagaaaatgatcactttagttcctgaaccaaaattcaatatcctcaaattgaatctcaaatccttgaatccct 22856951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 223 - 433
Target Start/End: Complemental strand, 22857621 - 22857410
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgt 322  Q
    ||||| |||| ||||||||||| ||| ||||  |||||||||| ||| ||||||||||||||||||||||  |||||  |||||||||||||| ||||||    
T  22857621 tgactttgcacttccgttatcactttagtccatgacgttaaataattatgttaagtgatgatgtgacacaagttttataatgacatgacatatgaggtgt 22857522  T
Q  323 cacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccct-aaatct 421  Q
    |||||| |||||||| |||||||||| | ||||||||      |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  22857521 cacatggactaaagtgaaagtagaaactagtcactttgaaaactgaaccaaaaatcaatatacccaaattgaatctcaaatccttaaatccctaaaatct 22857422  T
Q  422 caaatccttaaa 433  Q
    ||||||| ||||    
T  22857421 caaatccctaaa 22857410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 219 - 411
Target Start/End: Original strand, 3117726 - 3117918
Alignment:
Q  219 tctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataag 318  Q
    ||||||||||| || ||||||||||| ||| |   | || ||||||| ||| |||||| |||||||||||||||| |||||||||| |||||||||| ||    
T  3117726 tctctgactctccacttccgttatcactttagcgtctgaagttaaataattttgttaattgatgatgtgacacatgttttacgatggcatgacatatgag 3117825  T
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||||||   |||||||| ||||||||||||| ||| ||| || |||||||||||||| |||||||||||||||||| |||||||| |||||    
T  3117826 gtgtcacaatgactaaagtgaaagtagaaaatgatcattttagtccttgaaccaaaaattaatatccccaaattgaatatcaaatccctaaat 3117918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 6612495 - 6612701
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| |||| |||||| |||  |||| |||||||||| ||| ||||||||||| ||||||||          | ||||| |  |||| |    
T  6612495 gtctctgactctgcacttccattatcactttaatccctgacgttaaataattttgttaagtgattatgtgacat---------gctgacaaggaatatga 6612585  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaa 417  Q
    ||||||||| | |||||| | ||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||| |||||    
T  6612586 ggtgtcacagggactaaattcaaagtagaaaatgatcacttttgtccttgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaattcctaa 6612685  T
Q  418 atctcaaatccttaaa 433  Q
    ||||||||||| ||||    
T  6612686 atctcaaatccctaaa 6612701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 221 - 428
Target Start/End: Original strand, 51450080 - 51450286
Alignment:
Q  221 tctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggt 320  Q
    |||||||||||| || ||| |||||||| ||  | |||||||||| ||| ||||||||| ||||||||||||| ||||||||||||||| ||||| ||||    
T  51450080 tctgactctgcactttcgt-atcattttagtatctgacgttaaataattttgttaagtggtgatgtgacacatgttttacgatgacatgtcatatgaggt 51450178  T
Q  321 gtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatc 420  Q
    |||||| | |||||| | ||||||||||||| ||||| | || | |||||||||||| ||||||||||| ||||||||||||||   ||||  |||||||    
T  51450179 gtcacagggactaaactgaaagtagaaaatgatcactatagtccatgaaccaaaaataaatatccccaacttgaatctcaaatctcaaaatttctaaatc 51450278  T
Q  421 tcaaatcc 428  Q
    ||||||||    
T  51450279 tcaaatcc 51450286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 283 - 410
Target Start/End: Original strand, 25038022 - 25038149
Alignment:
Q  283 atgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaata 382  Q
    ||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||  ||||||| || | |||||||||||||||||    
T  25038022 atgtgacacatgttttatgatgacataacatatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaata 25038121  T
Q  383 tccccaaattgaatctcaaatccttaaa 410  Q
    |||| |||||||||||||||||| ||||    
T  25038122 tccctaaattgaatctcaaatccctaaa 25038149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 283 - 410
Target Start/End: Original strand, 25043234 - 25043361
Alignment:
Q  283 atgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaata 382  Q
    ||||||||||| ||||| |||||||| |||||| ||||||||||||||||||||| ||||||||||||  ||||||| || | |||||||||||||||||    
T  25043234 atgtgacacatgttttatgatgacataacatatgaggtgtcacatgaactaaagtgaaagtagaaaattatcactttggtccctgaaccaaaaatcaata 25043333  T
Q  383 tccccaaattgaatctcaaatccttaaa 410  Q
    |||| |||||||||||||||||| ||||    
T  25043334 tccctaaattgaatctcaaatccctaaa 25043361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 218 - 412
Target Start/End: Complemental strand, 34088516 - 34088322
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| ||||  ||||| |||  |||  ||| |||||| ||| ||||||||||||||| ||||||| ||||||||||||||||||| | |    
T  34088516 gtctctgactctgcacttccactatcactttaatccttgacattaaataattatgttaagtgatgatgcgacacatgttttacgatgacatgacatttga 34088417  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
     |||||| | | |||||||| ||||||||||   |||||||| || | ||||| |||| |||||||||||||||||||| |||||||| ||||||    
T  34088416 tgtgtcatagggactaaagtgaaagtagaaatgtgtcactttggtccctgaacaaaaattcaatatccccaaattgaatttcaaatccctaaatc 34088322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 279 - 433
Target Start/End: Complemental strand, 51453720 - 51453571
Alignment:
Q  279 gatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatc 378  Q
    ||||||||||||||  ||||| ||||||||| ||||| | |||||||||| |||||||| ||| ||||     ||||||||  | | |||| || |||||    
T  51453720 gatgatgtgacacaggttttatgatgacatgtcatatgatgtgtcacatggactaaagtaaaaataga-----gtcactttgatccctgaatcataaatc 51453626  T
Q  379 aatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    ||||||| |||||||||| |||||||| ||||||| |||||||||||||||||||    
T  51453625 aatatccgcaaattgaatttcaaatccctaaatccttaaatctcaaatccttaaa 51453571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 32665744 - 32665642
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaac-caaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | ||||| |||||||||||||||||||||||||| |||||||| |||    
T  32665744 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaacacaaaaatcaatatccccaaattgaatatcaaatccctaa 32665645  T
Q  410 atc 412  Q
    |||    
T  32665644 atc 32665642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 52439618 - 52439732
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    |||||||| | || ||||| |||||||||||||||||||||  | | | |||||||||||||||||| |||||||||| |||||| | ||||||||||||    
T  52439618 gtgtcacaaggaccaaagtgaaagtagaaaatggtcactttgatccctaaaccaaaaatcaatatcctcaaattgaatatcaaattcctaaatccctaaa 52439717  T
Q  419 tctcaaatccttaaa 433  Q
    | | |||||||||||    
T  52439718 ttttaaatccttaaa 52439732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 9339795 - 9339896
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| || ||||||| | || ||||| ||||||||||||||||||||| ||   ||||||||||||||||||||||||||||||| |||||||| ||||    
T  9339795 catatgagatgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 9339894  T
Q  411 tc 412  Q
    ||    
T  9339895 tc 9339896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 419
Target Start/End: Complemental strand, 9340999 - 9340891
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||| ||||||| |||||| ||||| |||||| | ||||    
T  9340999 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaattcaatattcccaaaatgaatatcaaattcctaaa 9340900  T
Q  411 tccctaaat 419  Q
    |||||||||    
T  9340899 tccctaaat 9340891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 218 - 419
Target Start/End: Complemental strand, 6614026 - 6613833
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcc-cagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatata 316  Q
    ||||||||||||||| ||| ||||||||||| |||| | |||||||||| ||| ||||||||||||||||||||          | ||||| |   |||     
T  6614026 gtctctgactctgcacttcagttatcattttagtcctccgacgttaaataattttgttaagtgatgatgtgacat---------gctgacaagcagtatg 6613936  T
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
     ||| ||||| | |||||||| ||||||| ||||  | |||||  | | |||||||||||||||||||||||||||||||||||||||| ||||||| ||    
T  6613935 gggtttcacagggactaaagtgaaagtaggaaattattactttgttccctgaaccaaaaatcaatatccccaaattgaatctcaaatccctaaatcctta 6613836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 11830064 - 11830158
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||||||| | |||||| ||||||||||||||||| |||  | || |||||||||||||||||||  |||||||||||||||| |||||||    
T  11830064 aggtgtcacatggattaaagtgaaagtagaaaatggtcattttgatcctagaaccaaaaatcaatatcctaaaattgaatctcaaattcttaaat 11830158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 32664680 - 32664773
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    |||||||||||| |||||||| || |||||| ||||||||||||| |||||||||||| |||||| | ||||||| |||||||||||||| ||||    
T  32664680 aaagtagaaaatagtcactttggt-cttgaatcaaaaatcaatattcccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaaa 32664773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 7944304 - 7944405
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||||  || ||||| ||||||||||||  ||||||| || | || |||||||||||||||||||||||||||| |||||||| ||||    
T  7944304 catatgaggtgtcacatagaccaaagtgaaagtagaaaattatcactttggtccctggaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 7944403  T
Q  411 tc 412  Q
    ||    
T  7944404 tc 7944405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 333 - 433
Target Start/End: Complemental strand, 52440512 - 52440412
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaa 432  Q
    ||||| |||||||||||| |||||||| || | |||||||||||| | ||| |||||||||||| |||||| | ||||||| |||||||||||||| |||    
T  52440512 aaagtgaaagtagaaaatagtcactttggtccctgaaccaaaaataagtattcccaaattgaatatcaaattcctaaatccttaaatctcaaatccctaa 52440413  T
Q  433 a 433  Q
    |    
T  52440412 a 52440412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 331 - 412
Target Start/End: Original strand, 16249832 - 16249913
Alignment:
Q  331 ctaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    ||||||| ||||||||||||||||| ||| || | |||||| |||||||||||||| ||||||||||| |||||| ||||||    
T  16249832 ctaaagtgaaagtagaaaatggtcattttagtccctgaaccgaaaatcaatatccctaaattgaatcttaaatccctaaatc 16249913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 317 - 414
Target Start/End: Original strand, 26518264 - 26518361
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    ||||||||||| || |||||| || |||||||||||||||||| ||   |||||| |||| ||||||| |||||||||||||||||| | ||||||||    
T  26518264 aggtgtcacataaattaaagtgaaggtagaaaatggtcactttggtctctgaaccgaaaaccaatatctccaaattgaatctcaaattcctaaatccc 26518361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 330 - 403
Target Start/End: Original strand, 34085710 - 34085783
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaat 403  Q
    |||||| | ||||||||||||| |||||||  | ||||||||||||||||||||||||||||||||| ||||||    
T  34085710 actaaaatgaaagtagaaaatgatcactttgatgcttgaaccaaaaatcaatatccccaaattgaatttcaaat 34085783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 390
Target Start/End: Complemental strand, 44720800 - 44720722
Alignment:
Q  312 atataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa 390  Q
    |||| ||||||||||   |||||||| |||||||||||| |||||||| ||||||||||| |||||||||||| |||||    
T  44720800 atatgaggtgtcacactgactaaagtgaaagtagaaaattgtcactttggttcttgaaccgaaaatcaatatctccaaa 44720722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 218 - 390
Target Start/End: Complemental strand, 50107250 - 50107078
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||||||| | |||| ||||||||||| ||| ||||  | |||||||| ||| |||||| ||||||  ||||| |  ||||| | ||||| |   ||| |    
T  50107250 gtctctgaatgtgcacttccgttatcactttagtccttggcgttaaataattatgttaactgatgacatgacaaaggttttatgctgacaaggagtatga 50107151  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa 390  Q
    ||||||||||| ||||| || ||||||| | ||||||||||| || ||| |||| ||||| ||||||||||||    
T  50107150 ggtgtcacatggactaacgtgaaagtaggacatggtcactttggtcctttaaccgaaaattaatatccccaaa 50107078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 316 - 391
Target Start/End: Original strand, 1001325 - 1001400
Alignment:
Q  316 aaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaat 391  Q
    ||||||||||||| |||||||| |||||||||||| || |||||  | |||||||| |||||||||||||| ||||    
T  1001325 aaggtgtcacatggactaaagtgaaagtagaaaatagttactttgatccttgaaccgaaaatcaatatccctaaat 1001400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 5782551 - 5782665
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    |||||||||| |||||||| ||| || ||||| ||||||||  | | | ||||||||||||||||||||||  | ||||||| || | ||||||| ||||    
T  5782551 gtgtcacatggactaaagtgaaactaaaaaattgtcactttaatccctaaaccaaaaatcaatatccccaatatcaatctcacattcctaaatccttaaa 5782650  T
Q  419 tctcaaatccttaaa 433  Q
    || ||||||| ||||    
T  5782651 tcacaaatccctaaa 5782665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 310 - 392
Target Start/End: Complemental strand, 7945529 - 7945447
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaatt 392  Q
    |||||| |||||||||| | |  ||||| ||||||||||||||||||||| || | | |||||||||||||||| ||||||||    
T  7945529 acatatgaggtgtcacaaggatcaaagtgaaagtagaaaatggtcactttggtccctaaaccaaaaatcaatattcccaaatt 7945447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 52439559 - 52439625
Alignment:
Q  226 ctctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacaca 292  Q
    ||||||||||||||||||| ||| ||||| |||||||||  | ||||||||||||||||||| ||||    
T  52439559 ctctgcatttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtgtcaca 52439625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 258 - 387
Target Start/End: Original strand, 8975275 - 8975404
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcact 357  Q
    |||||||| ||| |||||| ||||||| ||||| || ||||| |  |||| |   ||| || ||||||| | |||||||| |||||||||||||||||||    
T  8975275 cgttaaataattttgttaattgatgatatgacaaatgttttatgccgacaaggagtatgagatgtcacagggactaaagtgaaagtagaaaatggtcact 8975374  T
Q  358 tttgttcttgaaccaaaaatcaatatcccc 387  Q
    || || |   ||||||||||||||||||||    
T  8975375 ttggtcccgaaaccaaaaatcaatatcccc 8975404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 1407803 - 1407871
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcc 385  Q
    |||||||||||| |||||||| ||||||||||||  ||||||| || |||||||| ||||| |||||||    
T  1407803 aggtgtcacatggactaaagtgaaagtagaaaattatcactttggtccttgaaccgaaaattaatatcc 1407871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 414
Target Start/End: Complemental strand, 39726621 - 39726538
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    |||||||| |||||||||||| |||| ||| |  || |||||||||||||||||| |||||||||||  ||||||| ||||||||    
T  39726621 actaaagtgaaagtagaaaatagtcattttagccct-gaaccaaaaatcaatatcaccaaattgaattccaaatccctaaatccc 39726538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 317 - 405
Target Start/End: Original strand, 39977507 - 39977595
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||||| | ||||||||  | |||||||||| | ||||| ||   |||||||||||||||||||| ||||||||||| |||||||    
T  39977507 aggtgtcacaaggactaaagtagatgtagaaaatgataactttggtctctgaaccaaaaatcaatatcctcaaattgaatcgcaaatcc 39977595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 224 - 287
Target Start/End: Original strand, 9339728 - 9339791
Alignment:
Q  224 gactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  9339728 gactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 9339791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 7945601 - 7945524
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatat 295  Q
    |||||||||| |||| ||||||||||| ||| ||||| |||||||||  | | || |||||||||||||| |||||||    
T  7945601 gtctctgactatgcacttccgttatcactttagtccctgacgttaaaaaaatatgctaagtgatgatgtggcacatat 7945524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 372 - 415
Target Start/End: Complemental strand, 5783041 - 5782998
Alignment:
Q  372 aaaaatcaatatccccaaattgaatctcaaatccttaaatccct 415  Q
    |||||||||||||||||| || |||||||||||| |||||||||    
T  5783041 aaaaatcaatatccccaacttaaatctcaaatccctaaatccct 5782998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 10333069 - 10333128
Alignment:
Q  225 actctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgat 284  Q
    |||||||| ||||||||||||||| ||||  |||||||||  | ||||||||||||||||    
T  10333069 actctgcacttccgttatcattttagtccttgacgttaaaaaaatctgttaagtgatgat 10333128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 44719527 - 44719594
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccc 386  Q
    ||||||||||||||||| | |||||||||||| ||||||||  | | |||||  ||||||||||||||    
T  44719527 gtgtcacatgaactaaaatgaaagtagaaaattgtcactttgctccctgaactgaaaatcaatatccc 44719594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 10333233 - 10333164
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||||||| ||||||||||| ||| ||| |   |||||||  | |||||||||||||||||||    
T  10333233 gtctctgactctgcacttccgttatcactttagtctctagcgttaaaaaaatctgttaagtgatgatgtg 10333164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 387
Target Start/End: Original strand, 29766111 - 29766168
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcccc 387  Q
    |||||||| ||| |||||||| |||||||| || | ||||| ||||||||||||||||    
T  29766111 actaaagtgaaaatagaaaattgtcactttggtccctgaacaaaaaatcaatatcccc 29766168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 32665817 - 32665748
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||| |||||||||| ||||||||||| ||| ||||| | ||||| |  | |||||||||||||||||||    
T  32665817 gtctttgactctgcacttccgttatcactttagtccctggcgttacaaaaatctgttaagtgatgatgtg 32665748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 33342511 - 33342564
Alignment:
Q  237 cgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgaca 290  Q
    |||||||| ||| ||| | |||||||||| ||| ||||||||||||||||||||    
T  33342511 cgttatcactttagtctctgacgttaaataattatgttaagtgatgatgtgaca 33342564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 3e-49; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 219 - 433
Target Start/End: Original strand, 5736919 - 5737133
Alignment:
Q  219 tctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataag 318  Q
    ||||| ||||| || || |||||||| ||| |||||  ||||||||| ||| ||||||||||||||||||||||  ||||||||||||||||||||| ||    
T  5736919 tctctaactctacactttcgttatcactttagtccctcacgttaaataattttgttaagtgatgatgtgacacaggttttacgatgacatgacatatgag 5737018  T
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatc-aatatccccaaattgaatctcaaatccttaaatccctaa 417  Q
    |||||||| | |||||||| ||||||| ||||  ||||||| || | ||| ||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  5737019 gtgtcacaaggactaaagtaaaagtag-aaattatcactttggtccctgatccaaaaatcaaatatccccaaattgaatctcaaatccttaaatctctaa 5737117  T
Q  418 atctcaaatccttaaa 433  Q
    |||| |||||| ||||    
T  5737118 atctgaaatccctaaa 5737133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 258 - 412
Target Start/End: Complemental strand, 5738030 - 5737876
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcact 357  Q
    |||||||| |||||||||||||||||||| ||||||  | || ||||||||||||||| |||||||||||| |||||||| |||||| ||||||||||||    
T  5738030 cgttaaataattctgttaagtgatgatgtaacacatggtatatgatgacatgacatatgaggtgtcacatggactaaagtaaaagtaaaaaatggtcact 5737931  T
Q  358 tttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    || ||   | || ||||||||||||||||||||||||||||||||||| ||||||    
T  5737930 ttggtctctaaatcaaaaatcaatatccccaaattgaatctcaaatccctaaatc 5737876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 281 - 419
Target Start/End: Complemental strand, 28619536 - 28619398
Alignment:
Q  281 tgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaa 380  Q
    ||||||||||||| || |||||||||||||||||||| |||||||||| ||||||   ||||||||||||| |||||||  | | |||||||||||||||    
T  28619536 tgatgtgacacatgttatacgatgacatgacatataatgtgtcacatggactaaatcgaaagtagaaaatgatcactttaatccatgaaccaaaaatcaa 28619437  T
Q  381 tatccccaaattgaatctcaaatccttaaatccctaaat 419  Q
    |||||||||||||||| |||||||| |||||||||||||    
T  28619436 tatccccaaattgaatttcaaatccctaaatccctaaat 28619398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 218 - 428
Target Start/End: Complemental strand, 5965489 - 5965279
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||| |||||||||| ||||||||||| ||| ||| | |||||||||||||| |||||||| ||||||||| |||| || |||||||||||||||| | |    
T  5965489 gtctttgactctgcacttccgttatcactttagtctctgacgttaaatgattatgttaagtaatgatgtgatacatgttatacgatgacatgacatttga 5965390  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttct-tgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
     ||||||||   | |||||| |||||||||||| |||| ||||| ||| ||||  |||||||||||||| |||||||||| |||||||  ||||| ||||    
T  5965389 tgtgtcacaaagagtaaagtgaaagtagaaaattgtca-ttttggtctatgaagtaaaaatcaatatccacaaattgaatttcaaatctctaaattccta 5965291  T
Q  417 aatctcaaatcc 428  Q
    ||||| ||||||    
T  5965290 aatcttaaatcc 5965279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 257 - 419
Target Start/End: Original strand, 30134681 - 30134843
Alignment:
Q  257 acgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcac 356  Q
    |||||| || ||| ||||| ||||||||||||||||| ||||||||||||||| ||| | | ||||||||   |||||||| |||||||||||| |||||    
T  30134681 acgttatataattatgttaggtgatgatgtgacacatgttttacgatgacatgtcatttgatgtgtcacagagactaaagtgaaagtagaaaattgtcac 30134780  T
Q  357 ttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaat 419  Q
    ||| || ||| |||||||||||||||| | |||||||||| |||||||||||||||| |||||    
T  30134781 tttggtcctttaaccaaaaatcaatattcacaaattgaatttcaaatccttaaatccttaaat 30134843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 41121220 - 41121374
Alignment:
Q  257 acgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcac 356  Q
    ||||||||| ||||||| |||||||| |||  |||   |||||||||||||||| |||| |||||| ||| |  ||||||| |||||||||||| |||||    
T  41121220 acgttaaataattctgtaaagtgatggtgttgcacgggttttacgatgacatgatatatgaggtgtaacaagggctaaagtgaaagtagaaaattgtcac 41121319  T
Q  357 ttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||| || ||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  41121320 tttggtccttgaaccaaaaatcaatatccccaaattgaatttcaaatctttaaat 41121374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 271 - 427
Target Start/End: Complemental strand, 32564503 - 32564347
Alignment:
Q  271 tgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaac 370  Q
    ||||||||||||||||||||||  ||||| ||||||||| ||||| | |||||||||| |||||||| | ||||||||||| ||| ||| || | |  ||    
T  32564503 tgttaagtgatgatgtgacacaggttttaggatgacatgccatatgatgtgtcacatggactaaagtgatagtagaaaatgatcattttagtcccttgac 32564404  T
Q  371 caaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatc 427  Q
    ||||||| |||||||||  |||||||||||||| | |||||||||||||||||||||    
T  32564403 caaaaatgaatatccccgtattgaatctcaaattcctaaatccctaaatctcaaatc 32564347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 32898419 - 32898297
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||||||||||||| |||||||||| |||||||| ||||    
T  32898419 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatcctcaaattgaatatcaaatccctaaa 32898320  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||| | |||||||||||    
T  32898319 tccctaaattttaaatccttaaa 32898297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 35177551 - 35177665
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    |||||||| | || ||||| ||||||||||||||| ||||| || | |||||||||||||| |||||||||||||||| |||||||| ||||| ||||||    
T  35177551 gtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcagtatccccaaattgaatatcaaatccctaaattcctaaa 35177650  T
Q  419 tctcaaatccttaaa 433  Q
    ||| |||||||||||    
T  35177651 tcttaaatccttaaa 35177665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 39138612 - 39138517
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||||||| | |||||||| |||||||||||||||||||||  |||||| ||| ||||||||||||||| ||||||||||||||||| ||||||    
T  39138612 aggtgtcacaaggactaaagtgaaagtagaaaatggtcactttgattcttgtaccgaaaatcaatatccccgaattgaatctcaaatccctaaatc 39138517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 222 - 414
Target Start/End: Complemental strand, 45476606 - 45476414
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtg 321  Q
    ||||||||||| |||  |||||| ||| ||| | | |||||||  | | ||||||||||||||||| | ||| | ||| | ||||| ||  ||| | |||    
T  45476606 ctgactctgcacttctcttatcactttagtctctgtcgttaaaaaaatatgttaagtgatgatgtggcgcatgtcttatgctgacaagaagtatgatgtg 45476507  T
Q  322 tcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    ||| ||| || ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||| |||||||||||  ||||||||    
T  45476506 tcatatggaccaaagtaaaagtagaaaatggtcactttagtccctgaaccaaaaatcaatattcccaaattaaatctcaaatctctaaatccc 45476414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 1952944 - 1952843
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| |||||||| ||||    
T  1952944 catatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccctaaa 1952845  T
Q  411 tc 412  Q
    ||    
T  1952844 tc 1952843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 10407558 - 10407436
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| ||||||||||||||| ||||| ||   |||||||||||||||||| |||||||||||| |||||   |||||    
T  10407558 catatgaggtgtcataaggaccaaagtgaaagtagaaaatggttactttagtctctgaaccaaaaatcaatatgcccaaattgaatatcaaagtgttaaa 10407459  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    |||||||| || |||||||||||    
T  10407458 tccctaaagcttaaatccttaaa 10407436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 35178779 - 35178657
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| ||| ||||||||| ||||||| |  | |||||||||||||||||| |||||||||||| |||||| ||||||    
T  35178779 catatgaggtgtcatagggaccaaagtgaaactagaaaatgatcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcttaaa 35178680  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| ||||||| |||||| ||||    
T  35178679 tccttaaatctaaaatccctaaa 35178657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 223 - 359
Target Start/End: Original strand, 28619070 - 28619207
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgt 322  Q
    |||||||||| || |||||||| ||| ||| | | |||||||| ||| ||||||||||||||||| ||||| ||||||||||||||| ||| | | || |    
T  28619070 tgactctgcactttcgttatcactttagtctcggccgttaaataattttgttaagtgatgatgtgtcacatgttttacgatgacatggcatttgatgtat 28619169  T
Q  323 cacatgaactaaagttaaagtag-aaaatggtcacttt 359  Q
    || | | |||||||| || |||| ||||||||||||||    
T  28619170 catagggactaaagtgaatgtagaaaaatggtcacttt 28619207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 310 - 403
Target Start/End: Complemental strand, 41122717 - 41122624
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaat 403  Q
    |||||| | |||||||||  |||||||| ||| |||||||| ||||||||  | | ||||||||||||||||||| ||||||||||||||||||    
T  41122717 acatatgaagtgtcacattgactaaagtgaaaatagaaaatcgtcactttgatccctgaaccaaaaatcaatatctccaaattgaatctcaaat 41122624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 311 - 419
Target Start/End: Original strand, 10406355 - 10406463
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| | |||||||||| |||||||| ||   ||||||||||||||||||  ||||||||||| |||||| | ||||    
T  10406355 catatgaggtgtcacagggaccaaagtgatagtagaaaatagtcactttggtctctgaaccaaaaatcaatatttccaaattgaatatcaaattcctaaa 10406454  T
Q  411 tccctaaat 419  Q
    |||||||||    
T  10406455 tccctaaat 10406463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 229 - 386
Target Start/End: Original strand, 28524845 - 28525002
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatg 328  Q
    |||| ||||||||||||||| ||| | |||||||||| ||| |||||| |||||||||| || | |||||| | |||||     ||| | |||||| |||    
T  28524845 tgcacttccgttatcattttagtctctgacgttaaataattttgttaactgatgatgtggcaaagattttatgttgacaaagagtatgaagtgtcagatg 28524944  T
Q  329 aactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccc 386  Q
     |||||||| |||||| ||||| |||| ||| || | |||||| ||||||||||||||    
T  28524945 gactaaagtgaaagtaaaaaattgtcattttggtccgtgaaccgaaaatcaatatccc 28525002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 339 - 411
Target Start/End: Original strand, 32563773 - 32563845
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||||||||||||||||  | ||| |||||| |||||||| || ||||||||||||||||||| |||||    
T  32563773 aaagtagaaaatggtcactttaatccttaaaccaataatcaataccctcaaattgaatctcaaatccctaaat 32563845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 267 - 391
Target Start/End: Original strand, 33314983 - 33315107
Alignment:
Q  267 attctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttctt 366  Q
    ||||||||||||||||| ||||||||| ||||  | ||||| |   ||| |||||||||||| || ||||| |||||||||||| |||||||| || | |    
T  33314983 attctgttaagtgatgaagtgacacatgttttttgctgacaaggagtatgaggtgtcacatggaccaaagtgaaagtagaaaatagtcactttggtccgt 33315082  T
Q  367 gaaccaaaaatcaatatccccaaat 391  Q
    |||   ||||| |||||||||||||    
T  33315083 gaattgaaaattaatatccccaaat 33315107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 32898488 - 32898423
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  32898488 ctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 32898423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 35177475 - 35177540
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  35177475 ctgactctgcacttccgttatcactttagtccctgacgttaaaataatctgttaagtgatgatgtg 35177540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 332 - 390
Target Start/End: Original strand, 9625380 - 9625438
Alignment:
Q  332 taaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa 390  Q
    |||||| ||||||||||||||||||||| |||| |||| | ||||||||||||| ||||    
T  9625380 taaagtgaaagtagaaaatggtcactttagttcgtgaatcgaaaatcaatatcctcaaa 9625438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 218 - 392
Target Start/End: Original strand, 45476238 - 45476412
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| ||| ||||||| ||| ||| |   |||||||  | ||||||||||||||||||| | ||| | ||| | ||||  |   ||  |    
T  45476238 gtctctgactctgcacttctgttatcactttagtctctcccgttaaaaaaatctgttaagtgatgatgtggcgcatgtgttatgctgacgaggattaaga 45476337  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaatt 392  Q
    |||||||||   || ||||| |||||||||||| |||||||| || | |||||||||||||||||| || |||||    
T  45476338 ggtgtcacagagaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatattcctaaatt 45476412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 1953017 - 1952948
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||| |||||||| | ||||||||||| ||| ||| | |||||||||| | |||||||||||||||||||    
T  1953017 gtctatgactctgtacttccgttatcactttagtctctgacgttaaataaatctgttaagtgatgatgtg 1952948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 401
Target Start/End: Original strand, 2552189 - 2552272
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaa 401  Q
    |||||||||| || ||||||| |||||||||||| |||||||| |||  |||||| ||||||||||| |  | ||||||||||||    
T  2552189 aggtgtcacagga-ctaaagtgaaagtagaaaattgtcactttggtttctgaaccgaaaatcaatattcttagattgaatctcaa 2552272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 390
Target Start/End: Complemental strand, 28006626 - 28006471
Alignment:
Q  234 ttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaacta 333  Q
    ||||||||||| |||   ||| |||||||||| |||||||||| ||||||| ||||| | | |||| | ||||| |   ||| | || ||||| | ||||    
T  28006626 ttccgttatcactttaacccctgacgttaaataattctgttaactgatgatatgacaaa-agtttatgctgacagggagtatgatgtatcacaaggacta 28006528  T
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa 390  Q
    |||| ||| |||||| |||||||||| ||   ||||| |||||||||||||||||||    
T  28006527 aagtgaaaatagaaagtggtcactttggtcactgaactaaaaatcaatatccccaaa 28006471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 390
Target Start/End: Complemental strand, 28063929 - 28063774
Alignment:
Q  234 ttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaacta 333  Q
    ||||||||||| |||   ||| |||||||||| |||||||||| ||||||| ||||| | | |||| | ||||| |   ||| | || ||||| | ||||    
T  28063929 ttccgttatcactttaacccctgacgttaaataattctgttaactgatgatatgacaaa-agtttatgctgacagggagtatgatgtatcacaaggacta 28063831  T
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa 390  Q
    |||| ||| |||||| |||||||||| ||   ||||| |||||||||||||||||||    
T  28063830 aagtgaaaatagaaagtggtcactttggtcactgaactaaaaatcaatatccccaaa 28063774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 317 - 404
Target Start/End: Original strand, 8569563 - 8569650
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatc 404  Q
    |||||||||||| |||||| | |||| | |||||  ||| |||  | | ||||| |||||||||||||| ||||||||||||||||||    
T  8569563 aggtgtcacatggactaaaatgaaaggaaaaaattatcattttgatccctgaactaaaaatcaatatccacaaattgaatctcaaatc 8569650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 396
Target Start/End: Original strand, 2561354 - 2561420
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaat 396  Q
    |||||| | |||||||||||| || | ||| ||||||||||| |||||||||||||  |||||||||    
T  2561354 actaaaatgaaagtagaaaatagtgattttggttcttgaaccgaaaatcaatatcctaaaattgaat 2561420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 330 - 384
Target Start/End: Complemental strand, 28526479 - 28526425
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatc 384  Q
    |||||||| ||| ||||||||| ||| ||| ||||||||||| ||||||||||||    
T  28526479 actaaagtgaaaatagaaaatgatcattttggttcttgaaccgaaaatcaatatc 28526425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 35178847 - 35178783
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||| |||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  35178847 ctgattctgcacttccgttatcactttagtccctgacgttaaa-aaatctgttaagtgatgatgtg 35178783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 9626409 - 9626341
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcc 385  Q
    ||||||||||||||||||||| |||||||||| ||  ||||||  | | |||||| ||||| |||||||    
T  9626409 aggtgtcacatgaactaaagtgaaagtagaaattgaccactttaatccctgaaccgaaaattaatatcc 9626341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 289
Target Start/End: Complemental strand, 10407620 - 10407560
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgac 289  Q
    |||| ||||||||||| ||| || || |||||||||  | |||||||||||||||||||||    
T  10407620 tgcacttccgttatcactttagttcctgacgttaaaaaaatctgttaagtgatgatgtgac 10407560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 1e-48; HSPs: 27)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 218 - 411
Target Start/End: Original strand, 19050314 - 19050505
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||| ||||||||| ||||||||||| ||| ||| | |||||||||| ||||| ||||||||||||||||||  | ||||||||||| ||| ||||| |    
T  19050314 gtctcggactctgcacttccgttatcactttagtctccgacgttaaataattctattaagtgatgatgtgaca--tgttttacgatgatatggcatatga 19050411  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||||||||| |||||||| |||||| |||||| ||||||| || |||||| |||||||||||||||| |||||||||||||||||| |||||    
T  19050412 ggtgtcacatggactaaagtgaaagtataaaatgatcactttggtccttgaagcaaaaatcaatatccctaaattgaatctcaaatccctaaat 19050505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 224 - 428
Target Start/End: Original strand, 4701847 - 4702049
Alignment:
Q  224 gactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtc 323  Q
    |||| |||| ||||| ||||| ||| ||||| || ||||||| |||||||||||||||||| | |||||  |||||||||||| || |||  |  |||||    
T  4701847 gactatgcacttccgctatcactttagtccctgatgttaaataattctgttaagtgatgatattacacaagttttacgatgacgtggcatgaa--gtgtc 4701944  T
Q  324 acatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctca 423  Q
    ||||| |||||||| |||||||||||| |||||||| || | |||| ||||| |||||||||  |||||||||||||||||  |||||||||| ||||||    
T  4701945 acatggactaaagtgaaagtagaaaatagtcactttggtccctgaaacaaaagtcaatatcctaaaattgaatctcaaatctctaaatccctagatctca 4702044  T
Q  424 aatcc 428  Q
    |||||    
T  4702045 aatcc 4702049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 224 - 411
Target Start/End: Original strand, 39869002 - 39869188
Alignment:
Q  224 gactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtc 323  Q
    ||||||||| ||||||||||| ||| ||| | |||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  39869002 gactctgcacttccgttatcactttagtctctgacgttaaataattatgttaagtgatgatgtgacacatattttatgatgacatgacatatcaggtgtc 39869101  T
Q  324 acatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||   |||||| | |||||| ||||| |||||||| || | ||| | |||||| ||||| || ||| | |||||||||||| |||||    
T  39869102 acaatgactaaattgaaagtataaaatagtcactttagtccctgatctaaaaattaatatacctaaa-tcaatctcaaatccctaaat 39869188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 234 - 433
Target Start/End: Complemental strand, 4703248 - 4703049
Alignment:
Q  234 ttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaacta 333  Q
    ||||||||||| ||| ||| | | | |||||| ||||| |||||||||||||||   |   ||||| |||||| |||||||| || ||||| ||| ||||    
T  4703248 ttccgttatcactttagtctctggcattaaataattctattaagtgatgatgtggtgcgagttttatgatgacgtgacatatgagatgtcatatggacta 4703149  T
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    |||| |||||| ||||| |||||||| || | ||| |||||||||||||||||||||||||||||||||||  | |||| ||||||||||||||| ||||    
T  4703148 aagtgaaagtataaaattgtcactttggtccctgacccaaaaatcaatatccccaaattgaatctcaaatctctgaatcactaaatctcaaatccctaaa 4703049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 238 - 412
Target Start/End: Complemental strand, 20599933 - 20599759
Alignment:
Q  238 gttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagt 337  Q
    ||||||| ||| ||||| ||  |||||| ||| |||||||||||||||||||| |  || | | |||||||||||||| |||||||||| | |||||| |    
T  20599933 gttatcactttagtccccgatattaaataattatgttaagtgatgatgtgacataggttatgcaatgacatgacatatgaggtgtcacagggactaaaat 20599834  T
Q  338 taaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
     |||||| |||||||||||||| || | |||||||||||| ||||| ||||||||||||||||||| | ||||||    
T  20599833 gaaagtaaaaaatggtcactttggtccctgaaccaaaaattaatattcccaaattgaatctcaaattcctaaatc 20599759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 222 - 404
Target Start/End: Complemental strand, 39870717 - 39870535
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtg 321  Q
    ||||||||||| ||||| ||||| ||  ||| ||| |||||||| |||||||| ||| ||||||||| |||  ||||||||||||||||||||| |||||    
T  39870717 ctgactctgcacttccgatatcacttcagtctcaggcgttaaataattctgttgagtaatgatgtgatacacgttttacgatgacatgacatatgaggtg 39870618  T
Q  322 tcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatc 404  Q
    ||||| | | |||||| | |||||||||  |||||||| || |  |||||||||||||| ||| ||||||||||| |||||||    
T  39870617 tcacaaggaataaagtgagagtagaaaaatgtcactttcgtccccgaaccaaaaatcaaaatctccaaattgaatttcaaatc 39870535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 42278198 - 42278299
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||| ||||||||||||||||| || | ||||||||||||||||||||||||||||||| |||||||| ||||    
T  42278198 catatgaggtgtcacagggaccaaagtgaaactagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 42278297  T
Q  411 tc 412  Q
    ||    
T  42278298 tc 42278299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 257 - 391
Target Start/End: Original strand, 44158619 - 44158753
Alignment:
Q  257 acgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtag-aaaatggtca 355  Q
    ||||||||| ||| ||||||   ||||||||||| |  ||||||||||||||||||||| | ||||||||| |||| || | ||||||| ||||||||||    
T  44158619 acgttaaataattatgttaaacaatgatgtgacataagttttacgatgacatgacatatgatgtgtcacataaacttaaatgaaagtagtaaaatggtca 44158718  T
Q  356 cttttgttcttgaaccaaaaatcaatatccccaaat 391  Q
    |||| | || ||||||||||||||||||||||||||    
T  44158719 ctttag-tcctgaaccaaaaatcaatatccccaaat 44158753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 229 - 387
Target Start/End: Original strand, 21621910 - 21622068
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatg 328  Q
    |||| ||||||||||| ||| ||||| || ||||||| ||| |||||| ||||||||||||| | |||||||| ||||  |   ||| | |||||||| |    
T  21621910 tgcacttccgttatcactttagtccctgatgttaaataattatgttaactgatgatgtgacaaagattttacgctgacgaggagtatgatgtgtcacaag 21622009  T
Q  329 aactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcccc 387  Q
     |||||||| |||||| ||||||||||||||  ||| ||||||||||| ||||||||||    
T  21622010 cactaaagtgaaagtataaaatggtcactttgattcctgaaccaaaaaccaatatcccc 21622068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 319 - 412
Target Start/End: Original strand, 47874720 - 47874813
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||||| | || ||||| |||||| |||||||||||||| || ||||||||||||||||||||||| ||||||||| |||||||| ||||||    
T  47874720 gtgtcacagggaccaaagtgaaagtataaaatggtcactttggtccttgaaccaaaaatcaatatcccaaaattgaatatcaaatccctaaatc 47874813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 47878458 - 47878336
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| || ||||||||| |||||| | ||||    
T  47878458 catatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaa 47878359  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | | |||||| ||||||| ||||    
T  47878358 ttcttaaatcacaaatccctaaa 47878336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 256 - 405
Target Start/End: Original strand, 56041078 - 56041223
Alignment:
Q  256 gacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcac-atgaactaaagttaaagtagaaaatggtc 354  Q
    |||||||||| ||| ||||||||||||||||||||||  |||||| |||||||||||||| | ||||||| | || ||||| | | |||| |||||| ||    
T  56041078 gacgttaaataattatgttaagtgatgatgtgacacaagttttacaatgacatgacatatgaagtgtcactaagacctaaa-tgagagtaaaaaatgttc 56041176  T
Q  355 acttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||    ||| ||||| |||||||||||||| |||||||||| ||||||||    
T  56041177 act----ttcctgaactaaaaatcaatatccacaaattgaatttcaaatcc 56041223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 317 - 413
Target Start/End: Complemental strand, 42391854 - 42391758
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcc 413  Q
    |||||||||||| |||||||| ||||||||||||||||||||| || | ||||| ||||||  |||||  |||||||| |||||||||| |||||||    
T  42391854 aggtgtcacatggactaaagtgaaagtagaaaatggtcactttagtccctgaactaaaaattcatatcttcaaattgagtctcaaatccctaaatcc 42391758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 334 - 411
Target Start/End: Complemental strand, 53771021 - 53770944
Alignment:
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||| |||||||||||| |||||||| ||    ||||||||||||||||||||||| ||||||||||||||| |||||    
T  53771021 aagtgaaagtagaaaattgtcactttagtctccgaaccaaaaatcaatatccccaacttgaatctcaaatccctaaat 53770944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 397
Target Start/End: Complemental strand, 26172989 - 26172808
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaa--gtgatgatgtgacacatattttacgatgacatgacatat 315  Q
    ||||||||||||||| ||||||||||| ||| ||||  | |||||||  ||| ||||||  ||||| ||||| ||||| ||||| |   ||| |   |||    
T  26172989 gtctctgactctgcacttccgttatcactttagtccatgccgttaaaaaattatgttaaaagtgataatgtggcacatgttttatgtcaacaaggagtat 26172890  T
Q  316 aaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatc 397  Q
     ||||||||||   |||||||| | ||||||||||  ||||||| |||| |||| ||||||||||||| || ||||||||||    
T  26172889 gaggtgtcacaatgactaaagtgacagtagaaaataatcactttagttcctgaatcaaaaatcaatattccaaaattgaatc 26172808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 414
Target Start/End: Original strand, 38216621 - 38216716
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    |||||| ||||| |||||||| ||||||  |||||||| |||| |||| |||| | | |||||||||||| ||||||||| |||||||| ||||||||    
T  38216621 aggtgttacatggactaaagtgaaagta--aaatggtccctttggttcctgaatcgataatcaatatcccaaaattgaatatcaaatccctaaatccc 38216716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 334 - 433
Target Start/End: Original strand, 54574597 - 54574696
Alignment:
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    |||| ||||||||||||| |||||||  | |  |||||||||||||| || | |||||||||| |||||| | ||| ||| |||||||||||||| ||||    
T  54574597 aagtgaaagtagaaaatgatcactttgatccccgaaccaaaaatcaaaattctcaaattgaatatcaaattcctaactccttaaatctcaaatccctaaa 54574696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 221 - 287
Target Start/End: Original strand, 50694828 - 50694894
Alignment:
Q  221 tctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||| |||||| ||||||||||  ||| ||||| |||||||||  |||||||||||||||||||||    
T  50694828 tctgattctgcacttccgttatctctttagtccctgacgttaaaaaattctgttaagtgatgatgtg 50694894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 42278129 - 42278194
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||||||||| |||  |||| |||||||||  | |||||||||||||||||||    
T  42278129 ctgactctgcacttccgttatcactttaatccctgacgttaaaaaaatctgttaagtgatgatgtg 42278194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 412
Target Start/End: Complemental strand, 25810381 - 25810285
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatc--cccaaattgaatctcaaatccttaaatc 412  Q
    |||||||||||| |||||||| |||||| ||||| |||| ||| ||  ||||||  ||||||||||||  ||||| |||||||| |||||| ||||||    
T  25810381 aggtgtcacatggactaaagtgaaagtataaaatagtca-tttggtctttgaactgaaaatcaatatcttcccaagttgaatcttaaatccctaaatc 25810285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 405
Target Start/End: Complemental strand, 26685410 - 26685324
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||| | |||||| | |||||||||||| |||| |||  | | |||||||||||||||||| |  || |||||||||||||||    
T  26685410 gtgtcacagggactaaaatgaaagtagaaaatagtcagtttaatccctgaaccaaaaatcaatattcataacttgaatctcaaatcc 26685324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 279
Target Start/End: Complemental strand, 48740060 - 48740006
Alignment:
Q  225 actctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtg 279  Q
    |||||||| ||| ||||||| ||| ||||| |||||||||| |||||||||||||    
T  48740060 actctgcacttctgttatcactttagtccctgacgttaaataattctgttaagtg 48740006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 2786400 - 2786465
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatc 384  Q
    |||||| ||| | |||||| ||||||||||||||||||||| ||   |||||| ||||||||||||    
T  2786400 gtgtcatatggattaaagtaaaagtagaaaatggtcactttggtctctgaaccgaaaatcaatatc 2786465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 433
Target Start/End: Complemental strand, 42278912 - 42278855
Alignment:
Q  376 atcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    |||||||| |||||||||||| ||||||   ||||||| |||||||||||||| ||||    
T  42278912 atcaatattcccaaattgaatatcaaatttctaaatccttaaatctcaaatccctaaa 42278855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 53770481 - 53770562
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||| | ||| ||||||||||||||||| ||   | || || |||||||||||||||| |||||| |||||||| |||||    
T  53770481 actaaaatgaaaatagaaaatggtcactttagtcactaaagcagaaatcaatatccccaacttgaatatcaaatccctaaat 53770562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 53771092 - 53771035
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtg 279  Q
    ||||||||||| ||||||||||| ||| |||   |||||||||| |||||||||||||    
T  53771092 ctgactctgcacttccgttatcactttagtcattgacgttaaataattctgttaagtg 53771035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 381 - 427
Target Start/End: Complemental strand, 19051256 - 19051213
Alignment:
Q  381 tatccccaaattgaatctcaaatccttaaatccctaaatctcaaatc 427  Q
    ||||||||| ||||||||||||||   ||||||||||||||||||||    
T  19051256 tatccccaacttgaatctcaaatc---aaatccctaaatctcaaatc 19051213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 2e-44; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 218 - 425
Target Start/End: Complemental strand, 17330277 - 17330079
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||||||||||||||| ||| ||||  |||||||| | ||||||||||||||||||||||||||          ||| ||||||||| |    
T  17330277 gtctctgactctgcatttccgttatcactttagtccatgacgttaagttattctgttaagtgatgatgtgacacag---------tgatatgacatatga 17330187  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaa 417  Q
    |||||||||   |||||||| |||||| |||||||||||||| || | |||||| |||||||||||||| ||||||||||||||||| ||||||||||||    
T  17330186 ggtgtcacagagactaaagtgaaagtaaaaaatggtcactttggtccctgaacccaaaatcaatatccctaaattgaatctcaaatcattaaatccctaa 17330087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 9e-43
Query Start/End: Original strand, 271 - 403
Target Start/End: Original strand, 43380696 - 43380828
Alignment:
Q  271 tgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaac 370  Q
    ||||||||||||||||||||  | ||||||||||||  ||||||| ||||||||||||||||||||| ||||||||||||||||||||| || | |||||    
T  43380696 tgttaagtgatgatgtgacatgtgttttacgatgacgcgacatatgaggtgtcacatgaactaaagtgaaagtagaaaatggtcactttggtccctgaac 43380795  T
Q  371 caaaaatcaatatccccaaattgaatctcaaat 403  Q
    |||||||||||||||||||||||||| ||||||    
T  43380796 caaaaatcaatatccccaaattgaatttcaaat 43380828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 218 - 411
Target Start/End: Complemental strand, 17466875 - 17466683
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| ||||||||||| ||| |||  ||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| | ||||| |    
T  17466875 gtctctgactctgcacttccgttatcactttagtctaagacgttaaataattctgttaagtgatgatgtgacacatgttttaggatgacaaggcatatga 17466776  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||||||| | |||||||| |||||| ||||||||||  |||| ||   |||||||||| |||||||| ||||| ||| |||||||| |||||    
T  17466775 ggtgtcacacgcactaaagtgaaagtaaaaaatggtca-atttgatccctaaccaaaaattaatatccctaaattaaatttcaaatccctaaat 17466683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 229 - 415
Target Start/End: Original strand, 7412179 - 7412365
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatg 328  Q
    |||| ||||||||||| ||| |||||  || |||||| ||| |||||||||||||  |||||||| ||||||||||||||| ||||| | |||||||| |    
T  7412179 tgcacttccgttatcactttagtccctaacattaaataattatgttaagtgatgacatgacacatgttttacgatgacatggcatatgatgtgtcacaag 7412278  T
Q  329 aactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccct 415  Q
     |||||||| ||| |||||||||||||||||  | | | ||||||||| ||||||||| |||||||||||||||||| |||||||||    
T  7412279 gactaaagtgaaaatagaaaatggtcactttgttccctcaaccaaaaaacaatatccctaaattgaatctcaaatccctaaatccct 7412365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 257 - 413
Target Start/End: Complemental strand, 39257029 - 39256871
Alignment:
Q  257 acgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcac 356  Q
    ||||||||| ||| ||||||||||||  |||||| || ||||| ||||||||||||||| | |||||| ||||||||| || ||| ||||||||||||||    
T  39257029 acgttaaataattatgttaagtgatggcgtgacagatgttttatgatgacatgacatatgatgtgtcatatgaactaatgtgaaattagaaaatggtcac 39256930  T
Q  357 ttttgttct--tgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcc 413  Q
    ||| |||||  |||||||||||| ||||| ||| ||||||||||||||||| |||||||    
T  39256929 tttggttctcctgaaccaaaaattaatattccccaattgaatctcaaatccctaaatcc 39256871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 234 - 411
Target Start/End: Original strand, 33161859 - 33162037
Alignment:
Q  234 ttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacata-ttttacgatgacatgacatataaggtgtcacatgaact 332  Q
    ||||||||||| ||| ||||  |||||||||| ||| |||||||||||||| | ||||| | |||||| |||||||| ||||| ||||||||||   |||    
T  33161859 ttccgttatcactttagtccttgacgttaaataattttgttaagtgatgatataacacaaaattttacaatgacatggcatatgaggtgtcacaaagact 33161958  T
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||| | ||||||||||||  ||||||| || | ||||||||||||| |||||||||||| |||||||||||||||||||    
T  33161959 aaaatgaaagtagaaaatcatcactttagtccctgaaccaaaaatcgatatccccaaatcgaatctcaaatccttaaat 33162037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 7073715 - 7073922
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||||||| |||||| ||||||||||| ||| ||||| |||||||| | ||||||||||||||||||||||||||  |         ||||| ||||| |    
T  7073715 gtctctgattctgcacttccgttatcactttagtccctgacgttaagttattctgttaagtgatgatgtgacacagtt---------acatggcatatta 7073805  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaat-caatatccccaaattgaatctcaaatccttaaatcccta 416  Q
    ||||||||| | |||||||  ||| || |||||| ||||||| || | |||||||||||| |||||| || ||||||||||||||||||||||||| |||    
T  7073806 ggtgtcacagggactaaagcgaaaataaaaaatgatcactttggtccctgaaccaaaaattcaatattcctaaattgaatctcaaatccttaaatcacta 7073905  T
Q  417 aatctcaaatccttaaa 433  Q
     ||||||||||| ||||    
T  7073906 tatctcaaatccctaaa 7073922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 223 - 419
Target Start/End: Complemental strand, 33163500 - 33163304
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgt 322  Q
    ||||| |||||||||||||||| ||| ||| | |||||| | | ||| ||| ||||||||| ||||||||| |||||  |||||||| ||||||||||||    
T  33163500 tgactatgcatttccgttatcactttagtctctgacgttgattaattttgtgaagtgatgaagtgacacatgttttagaatgacatggcatataaggtgt 33163401  T
Q  323 cacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaat 419  Q
    |||| | || ||||| |||||||||||  ||   ||| || | ||||||||||||||||||||||||||||||| |||||||  ||||| |||||||    
T  33163400 cacaggcaccaaagtcaaagtagaaaaatgttgttttggtccctgaaccaaaaatcaatatccccaaattgaatttcaaatctctaaattcctaaat 33163304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 32765086 - 32765208
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | |||||||| |||||||||||||||| |||| || | ||||||||||||||||||||||||||||||| |||||||| ||||    
T  32765086 catatgaggtgtcatagggactaaagtgaaagtagaaaatggtcgctttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 32765185  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||| | |||||||||||    
T  32765186 tccctaaattttaaatccttaaa 32765208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 219 - 396
Target Start/End: Original strand, 17466118 - 17466295
Alignment:
Q  219 tctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataag 318  Q
    |||||||||||||| ||||||| ||| ||| ||||| ||||| |||  ||| |||||||||||||||| ||||   |||||| |||||||| ||||| ||    
T  17466118 tctctgactctgcacttccgttttcactttagtccctgacgtgaaacaattatgttaagtgatgatgtaacactggttttacaatgacatggcatatgag 17466217  T
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaat 396  Q
    |||||||||| | |||||| ||||||||||||| ||||||| |||| | ||| |||||| |||||| |||| ||||||    
T  17466218 gtgtcacatggattaaagtaaaagtagaaaatgatcactttggttcctaaactaaaaattaatatctccaatttgaat 17466295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 39015154 - 39015276
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||| ||| || |||||||||||||||||||| |||||||||||| |||||| |  |||    
T  39015154 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcagtttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaattccaaaa 39015253  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    |||||||||||||||||| ||||    
T  39015254 tccctaaatctcaaatccctaaa 39015276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 218 - 394
Target Start/End: Complemental strand, 34037720 - 34037544
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||| |||||||||| ||| ||||||| ||| || || | |||||||  ||| ||||||||||||||||||||||| ||||| | ||||| |   ||| |    
T  34037720 gtctatgactctgcacttctgttatcactttagttcccgccgttaaaaaattatgttaagtgatgatgtgacacatgttttatgctgacaaggagtatga 34037621  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattga 394  Q
    |||||||||   |||||||| | |||||||||| ||||||||  ||| |||||||||||||||||||| ||||||||    
T  34037620 ggtgtcacacagactaaagtgacagtagaaaatagtcactttgattcctgaaccaaaaatcaatatcctcaaattga 34037544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 275 - 411
Target Start/End: Complemental strand, 43381181 - 43381045
Alignment:
Q  275 aagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaa 374  Q
    ||||||||||||| ||||| ||||| |||||| || ||||| |||||||||| | |||||||| ||| |||||||| |||| ||| || | |||||  ||    
T  43381181 aagtgatgatgtggcacatgttttatgatgacgtggcatatgaggtgtcacaaggactaaagtaaaaatagaaaatagtcattttggtccctgaacacaa 43381082  T
Q  375 aatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||||||| |||||||||||||||||| |||||    
T  43381081 aatcaatatccctaaattgaatctcaaatccctaaat 43381045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 24458209 - 24458331
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | | || ||||||||||||||| |||||||||| ||| |||| ||||    
T  24458209 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctcaatcaaaaatcaatatcctcaaattgaatatcagatccctaaa 24458308  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||| | |||||||||||    
T  24458309 tccctaaattttaaatccttaaa 24458331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 223 - 349
Target Start/End: Complemental strand, 31814386 - 31814260
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgt 322  Q
    |||||||||| ||||||||||| ||| |||||   | |||||| ||||||||||||||||||||||||||  |||||||||||||||| |||| ||||||    
T  31814386 tgactctgcacttccgttatcactttagtccctagcattaaataattctgttaagtgatgatgtgacacaagttttacgatgacatgaaatatgaggtgt 31814287  T
Q  323 cacatgaactaaagttaaagtagaaaa 349  Q
    |||||  |||||| | ||| |||||||    
T  31814286 cacatagactaaaatgaaaatagaaaa 31814260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 14704154 - 14704255
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| |||||||||||| |||||||| || | ||||||||||||||||||||||||||||||| |||||||| ||||    
T  14704154 catatgaggtgtcacagggaccaaagtgaaagtagaaaatagtcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 14704253  T
Q  411 tc 412  Q
    ||    
T  14704254 tc 14704255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 311 - 428
Target Start/End: Complemental strand, 40000309 - 40000192
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| ||||||||||||| ||||||| || |||||||||||||||||||| |||||||||||| ||||||   ||||    
T  40000309 catatgaggtgtcagagggaccaaagtgaaagtagaaaatgatcactttggtccttgaaccaaaaatcaatattcccaaattgaatatcaaatttctaaa 40000210  T
Q  411 tccctaaatctcaaatcc 428  Q
    ||| ||||||||||||||    
T  40000209 tccttaaatctcaaatcc 40000192  T

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Target: chr2; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 218 - 405
Target Start/End: Complemental strand, 21733818 - 21733631
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| |||||| |||| ||| ||    |  ||||||  ||||||||||||||||||||||||||| ||||| | ||||| |   ||| |    
T  21733818 gtctctgactctgcacttccgtcatcactttagttgttgcagttaaaaaattctgttaagtgatgatgtgacacatgttttatgctgacaaggagtatga 21733719  T
Q  318 ggtgtcac-atgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
     ||||||| |||| ||||||| |||||| |||||||||||||| ||   |||||| ||||||||||| |||||||||||||||||||||    
T  21733718 agtgtcacgatga-ctaaagtgaaagtaaaaaatggtcactttggtctctgaaccgaaaatcaatattcccaaattgaatctcaaatcc 21733631  T

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Target: chr2; HSP #19
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 330 - 405
Target Start/End: Original strand, 21732283 - 21732358
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||| ||||||||||||||||||||| || | |||||||||||| |||||||||||||||||||||||||||    
T  21732283 actaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaattaatatccccaaattgaatctcaaatcc 21732358  T

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Target: chr2; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 339 - 433
Target Start/End: Original strand, 2910277 - 2910371
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    ||||| ||||||| ||||||| || | ||||||||||||||||||||||||||||||| || ||||| ||||||| ||||| |||||||||||||    
T  2910277 aaagtcgaaaatgatcactttggtccatgaaccaaaaatcaatatccccaaattgaatatcgaatccctaaatccgtaaatttcaaatccttaaa 2910371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 24459428 - 24459306
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| |||||||||||||||||||||  | | |||||||||||||||||| |||||||||||| |||||| | ||||    
T  24459428 catatgaggtgtcatagggaccaaagtgaaagtagaaaatggtcactttgatccctgaaccaaaaatcaatattcccaaattgaatatcaaattcgtaaa 24459329  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| ||||||| |||||| ||||    
T  24459328 tccttaaatctgaaatccctaaa 24459306  T

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Target: chr2; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 31091501 - 31091379
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| ||||||||||   || ||||| ||||||||||||||||||||| ||  ||||||||||||||||||| || | ||||||| |||||| | ||||    
T  31091501 catatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtctttgaaccaaaaatcaatattccgagattgaatatcaaattcctaaa 31091402  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  31091401 tccttaaatctcaaatccgtaaa 31091379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 333 - 418
Target Start/End: Original strand, 31090328 - 31090413
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    ||||| |||||||||||||| | |||| || | |||||||||||| |||||||||||||||||| |||||||||||||||||||||    
T  31090328 aaagtgaaagtagaaaatggccgctttggtccctgaaccaaaaattaatatccccaaattgaatatcaaatccttaaatccctaaa 31090413  T

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Target: chr2; HSP #24
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 39016357 - 39016256
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||||| || ||||| |||||||||||| |||||||| || | |||||||||||||||||| |||||||||||| | |||||| ||||    
T  39016357 catatgaggtgtcacatggaccaaagtgaaagtagaaaattgtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatgaaatccctaaa 39016258  T
Q  411 tc 412  Q
    ||    
T  39016257 tc 39016256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 317 - 426
Target Start/End: Complemental strand, 31443193 - 31443084
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
    ||||||||||   |||||||| |||||||||||| |||| ||| |||| |||||| |||||||||||| ||||||| |||||||||| | ||||||||||    
T  31443193 aggtgtcacagtgactaaagtgaaagtagaaaattgtcattttggttcctgaaccgaaaatcaatatctccaaattaaatctcaaattcctaaatcccta 31443094  T
Q  417 aatctcaaat 426  Q
     ||| |||||    
T  31443093 tatcccaaat 31443084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 311 - 426
Target Start/End: Complemental strand, 2911461 - 2911346
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgt-tcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    ||||| |||||||| | |||| ||||| |||||||||||| |||||||| || |||| ||||||||||||||||  ||||||||||| |||||| | |||    
T  2911461 catatgaggtgtcataggaaccaaagtgaaagtagaaaattgtcactttggtctctt-aaccaaaaatcaatatttccaaattgaatatcaaattcctaa 2911363  T
Q  410 atccctaaatctcaaat 426  Q
    |||| ||||||||||||    
T  2911362 atccttaaatctcaaat 2911346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 426
Target Start/End: Complemental strand, 5914967 - 5914871
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaat 426  Q
    |||||| | |||||| ||||| |||||||| || | |||||||||||||||||||||||  |||||||| |||||  ||||||||||||||||||||    
T  5914967 actaaaatgaaagtaaaaaattgtcactttagtccctgaaccaaaaatcaatatccccagcttgaatctaaaatctctaaatccctaaatctcaaat 5914871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 330 - 426
Target Start/End: Original strand, 12010227 - 12010323
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaat 426  Q
    |||||||| ||||||||||||||||| ||| ||   ||||||||||||||||||||||||||||||| |||||||  || || |||||||| |||||    
T  12010227 actaaagtgaaagtagaaaatggtcattttggtatatgaaccaaaaatcaatatccccaaattgaatatcaaatctctagattcctaaatcccaaat 12010323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 229 - 387
Target Start/End: Complemental strand, 34582706 - 34582548
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatg 328  Q
    |||| ||||||||||| ||| ||||| |||||||||| ||| | | || |||| ||||| || |  ||||| | ||||| ||  ||| ||||||||||||    
T  34582706 tgcacttccgttatcactttagtccctgacgttaaataattatatcaactgatcatgtggcaaaggttttatgctgacaagaggtatgaggtgtcacatg 34582607  T
Q  329 aactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcccc 387  Q
    ||||||||| |||||||||||||  |||||| || | ||||  ||||||||||||||||    
T  34582606 aactaaagtaaaagtagaaaatgtccactttagtccctgaataaaaaatcaatatcccc 34582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 223 - 411
Target Start/End: Complemental strand, 38985031 - 38984844
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatga-ttctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtg 321  Q
    |||||||||| ||||||||||| ||| ||| |  ||||||||| | || ||||||||| ||||||| |||| ||| || ||||| ||| ||||| | |||    
T  38985031 tgactctgcacttccgttatcactttagtcactaacgttaaataaattatgttaagtgttgatgtggcacaaattatatgatgagatgccatatgatgtg 38984932  T
Q  322 tcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||  ||  |||||||| |||||||||||| |||||||| || |   |||||||||| |||||||  ||||||||| |||||||| |||||    
T  38984931 tcgtatagactaaagtgaaagtagaaaattgtcactttagtcc--aaaccaaaaattaatatccaaaaattgaatttcaaatccgtaaat 38984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 12396162 - 12396248
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||||| |||||| | |||||||||||| |||||||| ||   | |||||||||||||||||||||| | |||||||||||||    
T  12396162 gtgtcacatggactaaaatgaaagtagaaaatagtcactttagtcactaaaccaaaaatcaatatccccaattagaatctcaaatcc 12396248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 426
Target Start/End: Original strand, 33439396 - 33439504
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcccta 416  Q
    |||| ||| ||| ||||||||||||||||||||||||| |||   ||| |||||  |||||||||||  ||||||||||| |||||||| || |||||||    
T  33439396 aggtatcatatggactaaagttaaagtagaaaatggtctcttagattcctgaactgaaaatcaatat-tccaaattgaatgtcaaatccctacatcccta 33439494  T
Q  417 aatctcaaat 426  Q
    |||| |||||    
T  33439495 aatcccaaat 33439504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 229 - 385
Target Start/End: Original strand, 37607189 - 37607345
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatg 328  Q
    |||| ||||||||||| ||| ||||| ||||||| || ||| |||||| |||||| |||||| |  ||||| | | ||| ||  ||| || ||||||| |    
T  37607189 tgcacttccgttatcactttagtccctgacgttatataattatgttaactgatgacgtgacaaaggttttatgctaacaagaagtatgagatgtcacaag 37607288  T
Q  329 aactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcc 385  Q
     |||||||| || ||||||||| |||||||| ||   ||||||||||||||||||||    
T  37607289 gactaaagtgaacgtagaaaatagtcactttggtctctgaaccaaaaatcaatatcc 37607345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 31090240 - 31090317
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatat 295  Q
    ||||||||||||||| ||||||||| ||||| ||||| |||||||||  | | ||||||||||||| ||||| |||||    
T  31090240 gtctctgactctgcacttccgttatgattttagtccctgacgttaaaaaaatatgttaagtgatgaggtgacgcatat 31090317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 258 - 390
Target Start/End: Complemental strand, 14887505 - 14887373
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcact 357  Q
    |||||||| ||| |||||| ||||||||||||| || ||||| | | ||| |   ||| |||||||||| | |||||||| ||||||||||||||||| |    
T  14887505 cgttaaataattttgttaactgatgatgtgacaaatgttttatgctaacaaggagtatgaggtgtcacagggactaaagtgaaagtagaaaatggtcaat 14887406  T
Q  358 tttgttcttgaaccaaaaatcaatatccccaaa 390  Q
     | || | ||||  |||||||||||||| ||||    
T  14887405 atggtccctgaattaaaaatcaatatcctcaaa 14887373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 287
Target Start/End: Original strand, 2910176 - 2910245
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||||||| |||| || ||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  2910176 gtctctgactctgcacttcctttgtcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 2910245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 321 - 414
Target Start/End: Complemental strand, 12004941 - 12004848
Alignment:
Q  321 gtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    |||||||  ||||||||||||| ||||||| |||  ||| || | | |||| |||| |||||||||||||||||||||  ||||| ||||||||    
T  12004941 gtcacatcgactaaagttaaagaagaaaattgtcgttttggtcccttaaccgaaaaccaatatccccaaattgaatcttcaatccctaaatccc 12004848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 414
Target Start/End: Complemental strand, 28864759 - 28864662
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    |||||||| ||| |||||||| ||| ||||||||| ||| ||| ||||  |||   ||||||||||| ||||| |||||| |||||||| ||||||||    
T  28864759 aggtgtcatatggactaaagtgaaaatagaaaatgatcattttagttccagaattgaaaatcaatattcccaagttgaatttcaaatccctaaatccc 28864662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 414
Target Start/End: Original strand, 31442506 - 31442603
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    |||||||| | | |||||||| |||||  ||||||  ||| || || | |||||| |||||||||||||| |||||||||||||||||| || |||||    
T  31442506 aggtgtcataaggactaaagtgaaagtcaaaaatgaacacattggtccctgaaccgaaaatcaatatccctaaattgaatctcaaatccctatatccc 31442603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 330 - 390
Target Start/End: Complemental strand, 18676758 - 18676698
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaa 390  Q
    |||||||  ||||||||||||||||||||| || | ||||| ||||||||||||| |||||    
T  18676758 actaaagcgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaatatctccaaa 18676698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 385
Target Start/End: Original strand, 26585194 - 26585318
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcact 357  Q
    |||||||| ||| |||||| ||||||||||  |||||||||| | ||||| |   ||| |||||||||| | |||||||| ||| ||| |||||||||||    
T  26585194 cgttaaataattatgttaattgatgatgtg--acatattttatgttgacaaggagtatgaggtgtcacagggactaaagtgaaaatag-aaatggtcact 26585290  T
Q  358 tttgttcttgaaccaaaaatcaatatcc 385  Q
    || || | |||||| ||||| |||||||    
T  26585291 ttggtccctgaaccgaaaataaatatcc 26585318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 18675259 - 18675328
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcccc 387  Q
    |||||||||| || ||||||| |||||||||||| ||||||||  | |||||| ||||||| |||||||||    
T  18675259 aggtgtcacagga-ctaaagtcaaagtagaaaattgtcactttgatccttgaatcaaaaattaatatcccc 18675328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 320 - 420
Target Start/End: Original strand, 12003745 - 12003845
Alignment:
Q  320 tgtcacatgaactaaagttaaagtagaaaatggtcacttttgttct-tgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    ||||||| | |||||||| ||| |||||||| || | ||||| ||| | |||| |||| ||||||||||||||||||| |||||||  ||||| ||||||    
T  12003745 tgtcacagggactaaagtgaaaatagaaaatagtaa-ttttggtctctcaaccgaaaaccaatatccccaaattgaatatcaaatctctaaattcctaaa 12003843  T
Q  419 tc 420  Q
    ||    
T  12003844 tc 12003845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 31091570 - 31091505
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||||||||| ||| ||| | |||||||||  | | |||||||||||||||||    
T  31091570 ctgactctgcacttccgttatcactttagtctctgacgttaaaaaaatatgttaagtgatgatgtg 31091505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 386 - 427
Target Start/End: Complemental strand, 31814255 - 31814214
Alignment:
Q  386 ccaaattgaatctcaaatccttaaatccctaaatctcaaatc 427  Q
    ||||||||||| ||||||| |||||||||||||||| |||||    
T  31814255 ccaaattgaatttcaaatctttaaatccctaaatcttaaatc 31814214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 314 - 402
Target Start/End: Original strand, 11985843 - 11985930
Alignment:
Q  314 ataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaa 402  Q
    ||||||||||||||  | |||||| |||||||||||  ||||||||  | | |||||| ||||| |||||  |||||||||||||||||    
T  11985843 ataaggtgtcacataga-taaagtgaaagtagaaaaaagtcactttgatccctgaaccgaaaattaatatttccaaattgaatctcaaa 11985930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 91; Significance: 6e-44; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 222 - 412
Target Start/End: Original strand, 20464149 - 20464339
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtg 321  Q
    ||||||||||| ||| ||||||| ||| ||||  |||||||||| | ||||||||||||||||||||||||| ||||||||| ||||||||||  ||||     
T  20464149 ctgactctgcacttctgttatcactttagtccacgacgttaaataactctgttaagtgatgatgtgacacatgttttacgataacatgacatacgaggta 20464248  T
Q  322 tcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||   |||||| | ||||||||||||||||||||| || | |||| ||||||||||||||||||| ||||| ||||||||| ||||||    
T  20464249 tcacagagactaaaatgaaagtagaaaatggtcactttggtccatgaatcaaaaatcaatatccccaatttgaacctcaaatccctaaatc 20464339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 48574433 - 48574311
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || |||||||||||| |||||||||||||||||||| |||||||  ||||    
T  48574433 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttagtccttgaaccaaaattcaatatccccaaattgaatatcaaatctctaaa 48574334  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||||| |||||||||||    
T  48574333 tccctaaatcttaaatccttaaa 48574311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 319 - 433
Target Start/End: Original strand, 55388216 - 55388330
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    |||||||| | || ||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| |||||||| ||||| ||||||    
T  55388216 gtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaattcctaaa 55388315  T
Q  419 tctcaaatccttaaa 433  Q
    ||| |||||||||||    
T  55388316 tcttaaatccttaaa 55388330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 310 - 433
Target Start/End: Complemental strand, 55389444 - 55389321
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    |||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||| ||||||||||| |||||||||||| |||||| | |||    
T  55389444 acatatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccgaaaatcaatattcccaaattgaatatcaaattcctaa 55389345  T
Q  410 atccctaaatctcaaatccttaaa 433  Q
    |||| |||||||||||||| ||||    
T  55389344 atccttaaatctcaaatccctaaa 55389321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 260 - 392
Target Start/End: Original strand, 612332 - 612464
Alignment:
Q  260 ttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttt 359  Q
    |||||| ||| ||||||||||||||||||||| | |||||||||||||||||| || ||||||||||   |||||||| ||||||||||||| ||| |||    
T  612332 ttaaataattatgttaagtgatgatgtgacacgtgttttacgatgacatgacacatgaggtgtcacagagactaaagtgaaagtagaaaatgatcaattt 612431  T
Q  360 tgttcttgaaccaaaaatcaatatccccaaatt 392  Q
        | ||||||||||||||||||||| |||||    
T  612432 aacccatgaaccaaaaatcaatatcccaaaatt 612464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 318 - 423
Target Start/End: Original strand, 33837319 - 33837424
Alignment:
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaa 417  Q
    ||||| ||| ||| |||| | ||||||||||||||||||||| || | ||||||||||||||||||||||| ||||||| |||||||||||| || ||||    
T  33837319 ggtgttacaagaattaaaatgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccagattgaatttcaaatccttaagtctctaa 33837418  T
Q  418 atctca 423  Q
    ||||||    
T  33837419 atctca 33837424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 218 - 412
Target Start/End: Original strand, 36279028 - 36279202
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||||||  ||||| ||||||||||||||||||||||                    | |    
T  36279028 gtctctgactctgcacttccgttatcattttagtccctgacgttaaaaaattcttttaagtgatgatgtgacacata--------------------tga 36279107  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    ||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||||  |||||||||||||||||| |||||||| ||||||    
T  36279108 ggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaaaaatatccccaaattgaatatcaaatccctaaatc 36279202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 17700668 - 17700790
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | ||||| |||||||||||  || ||||||||| |||||| | ||||    
T  17700668 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaacaaaaaatcaataatccaaaattgaatatcaaattcctaaa 17700767  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | | |||||||||||||||||||    
T  17700768 ttcttaaatctcaaatccttaaa 17700790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 36280291 - 36280169
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||| | |||| |||||||||||||||| || | | |||||||||||||||| |||||||||||| |||||| | ||||    
T  36280291 catatgaggtgtcacacggaccaaaatgaaagaagaaaatggtcactttagtccctaaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 36280192  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  36280191 tccttaaatctcaaatccctaaa 36280169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 48573134 - 48573256
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| |||||||||||||||||||||  | | |||||||||||||||||| || ||||||||| |||||| | ||||    
T  48573134 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattccaaaattgaatatcaaattcctaaa 48573233  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | | |||||||||||||| ||||    
T  48573234 ttcttaaatctcaaatccctaaa 48573256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 48809629 - 48809507
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | |||||||| |||||||||||||||||||||  | | |||||||||||||||||| || ||||||||| |||||| | ||||    
T  48809629 catatgaggtgtcagaaggactaaagtgaaagtagaaaatggtcactttgatccatgaaccaaaaatcaatattcctaaattgaatatcaaattcctaaa 48809530  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    | | |||||||||||||| ||||    
T  48809529 tacttaaatctcaaatccctaaa 48809507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 47075326 - 47075245
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||||||||||||||||||| |||||||| || | |||||||||||||||||||||||| |||||||| |||||| |||||    
T  47075326 actaaagttaaagtagaaaattgtcactttagtccctgaaccaaaaatcaatatccccaacttgaatcttaaatccctaaat 47075245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Original strand, 48808521 - 48808622
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| ||||||||||   || ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| |||||||| ||||    
T  48808521 catatgaggtgtcacagagaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaatccctaaa 48808620  T
Q  411 tc 412  Q
    ||    
T  48808621 tc 48808622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 52318291 - 52318190
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| |  | ||||| ||||||||||||||||||||| || | ||||||||||| ||||||||||||||||||| |||||||| ||||    
T  52318291 catatgaggtgtcacaaggtccaaagtgaaagtagaaaatggtcactttggtccatgaaccaaaaaacaatatccccaaattgaatatcaaatccctaaa 52318192  T
Q  411 tc 412  Q
    ||    
T  52318191 tc 52318190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 310 - 419
Target Start/End: Original strand, 53957821 - 53957930
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    |||||| |||||||||  | || ||||| ||||||||||||| | ||||| || | ||||||||||||||||||||||||||||||| |||||||| |||    
T  53957821 acatatgaggtgtcacggggaccaaagtgaaagtagaaaatgattactttagtccatgaaccaaaaatcaatatccccaaattgaatgtcaaatccctaa 53957920  T
Q  410 atccctaaat 419  Q
    |||| |||||    
T  53957921 atccttaaat 53957930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 427
Target Start/End: Complemental strand, 53959074 - 53958958
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| || ||||||| | || ||||| |||||||||||| |||||||| |  | |||||||||||||||||| |||||||||||| |||||| | ||||    
T  53959074 catatgagctgtcacagggaccaaagtgaaagtagaaaattgtcactttggcccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 53958975  T
Q  411 tccctaaatctcaaatc 427  Q
    ||| |||||||||||||    
T  53958974 tccttaaatctcaaatc 53958958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 319 - 428
Target Start/End: Complemental strand, 19115133 - 19115024
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaa 418  Q
    |||||||||| |||||||| ||||||||||||   |||||| || | ||||| |||||||||||||||||| |||||| ||| ||||  |||||| ||||    
T  19115133 gtgtcacatggactaaagtgaaagtagaaaataaccactttagtccatgaactaaaaatcaatatccccaatttgaatatcatatccccaaatccttaaa 19115034  T
Q  419 tctcaaatcc 428  Q
    ||||||||||    
T  19115033 tctcaaatcc 19115024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 301 - 427
Target Start/End: Original strand, 2591764 - 2591891
Alignment:
Q  301 gatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattg-aatctc 399  Q
    ||||| ||| ||||| |||||||||||| |||||||| |||||| ||||| | |||||| || | |||| |||||||||||||| | |||||| ||||||    
T  2591764 gatgatatggcatatgaggtgtcacatggactaaagtgaaagtaaaaaattgccactttggtccctgaagcaaaaatcaatatctcgaaattgaaatctc 2591863  T
Q  400 aaatccttaaatccctaaatctcaaatc 427  Q
    |||| | ||||| | |||||||||||||    
T  2591864 aaattcctaaattcttaaatctcaaatc 2591891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 319 - 405
Target Start/End: Original strand, 33427888 - 33427974
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||||| |||||||| ||||||||||||  ||||||| |  | |||||||||||||||||||||||| |||||||| ||||||    
T  33427888 gtgtcacatggactaaagtgaaagtagaaaattatcactttagcccctgaaccaaaaatcaatatccccaacttgaatcttaaatcc 33427974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 319 - 412
Target Start/End: Complemental strand, 47118037 - 47117945
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||||| | |||||||| ||| |||||| |||||||||| || | |||||||||||||||||||||||| ||||||||| ||||| ||||||    
T  47118037 gtgtcacaaggactaaagtgaaaatagaaa-tggtcactttagtccctgaaccaaaaatcaatatccccaacttgaatctcgaatccctaaatc 47117945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 411
Target Start/End: Complemental strand, 47428549 - 47428457
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||||| |||||||| ||||||| ||||||||||||| || | |||||||||||| ||||| |  || ||||||||||||||| |||||    
T  47428549 gtgtcacatggactaaagtgaaagtaggaaatggtcactttagtccctgaaccaaaaattaatattcataacttgaatctcaaatccctaaat 47428457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 319 - 410
Target Start/End: Original strand, 19114670 - 19114760
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    |||||||| | |||||||| |||||||||||||||||||||  | | |||| ||||||||||||| ||||| ||||||||||||||| ||||    
T  19114670 gtgtcacaaggactaaagtgaaagtagaaaatggtcactttaatccctgaatcaaaaatcaatat-cccaacttgaatctcaaatccctaaa 19114760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 324 - 411
Target Start/End: Original strand, 45599046 - 45599133
Alignment:
Q  324 acatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||| |||||| | ||||||||||||||||||||| |||| |||||||||||||||||| |  || ||||| ||||||||| |||||    
T  45599046 acatggactaaaatgaaagtagaaaatggtcactttagttcctgaaccaaaaatcaatattcttaacttgaaactcaaatccctaaat 45599133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 411
Target Start/End: Complemental strand, 45600911 - 45600833
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||||| |||||| ||||||| || ||| || |||||||||||||||||||||||||| |||||| |||||||| |||||    
T  45600911 aaagtgaaagtaaaaaatggccagtttagtccttgaaccaaaaatcaatatccccaacttgaatttcaaatccctaaat 45600833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 218 - 398
Target Start/End: Original strand, 3671114 - 3671287
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||| ||||||| || ||||||||||| |||  |||| | |||||||  ||| ||||||||||||||||||||||| ||||| | ||||| |   ||| |    
T  3671114 gtctatgactctccacttccgttatcactttaatccctgccgttaaaaaattatgttaagtgatgatgtgacacatgttttatgctgacaaggggtatga 3671213  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatct 398  Q
      ||||||  | |||||||| |||||||||||       ||| || | |||||| ||||||||||||||||||||||||||    
T  3671214 catgtcacggggactaaagtgaaagtagaaaa-------tttggtccctgaaccgaaaatcaatatccccaaattgaatct 3671287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 353 - 431
Target Start/End: Complemental strand, 17701861 - 17701783
Alignment:
Q  353 tcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatcctta 431  Q
    ||||||| || | |||| ||||||||||||| |||||||||||| ||||||||  |||| ||||||||| |||||||||    
T  17701861 tcactttggtccctgaagcaaaaatcaatattcccaaattgaatatcaaatcccaaaattcctaaatcttaaatcctta 17701783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 36280364 - 36280295
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||||||| ||||||||||| ||| ||||| |||||||||  | | |||||||||||||||||    
T  36280364 gtctctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatatgttaagtgatgatgtg 36280295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 40317947 - 40318018
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    |||||||||||| |||||||| || | |||| ||||||||||||| || ||||| |||||||||||| ||||    
T  40317947 aaagtagaaaatagtcactttggtccctgaatcaaaaatcaatattccaaaattaaatctcaaatccataaa 40318018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 234 - 412
Target Start/End: Complemental strand, 36827506 - 36827328
Alignment:
Q  234 ttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaacta 333  Q
    ||||||||||| ||| ||| | || ||||||| ||| |||||||||||||||||||| || ||||| | ||| | |     | | || ||||| | ||||    
T  36827506 ttccgttatcactttagtctctgatgttaaataattttgttaagtgatgatgtgacaaatgttttatgctgagaaggagcgtgaagtatcacagggacta 36827407  T
Q  334 aagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||| ||| ||||||||| | | ||| || | |||| | |||||||||||||||||||||||| |||||| | ||||||    
T  36827406 aagtgaaaatagaaaatgattattttggtccctgaatcgaaaatcaatatccccaaattgaatttcaaattcctaaatc 36827328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 222 - 279
Target Start/End: Complemental strand, 45600982 - 45600925
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtg 279  Q
    ||||||||||| ||||||||||| ||| ||||  |||||||||| |||||||||||||    
T  45600982 ctgactctgcacttccgttatcactttagtccacgacgttaaataattctgttaagtg 45600925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 47074828 - 47074909
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||| | ||| ||||||||||||||||| || |||||| |||||||||||| ||| || || || ||||||||| |||||    
T  47074828 actaaattgaaaatagaaaatggtcactttagtccttgaatcaaaaatcaatacccctaacttaaacctcaaatccctaaat 47074909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 47118098 - 47118037
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtg 279  Q
    ||||||||||||||| || |||||||| ||| ||||| |||||||||| ||| |||||||||    
T  47118098 gtctctgactctgcactttcgttatcactttagtccctgacgttaaataattttgttaagtg 47118037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 330 - 405
Target Start/End: Complemental strand, 3694075 - 3694000
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||| |||||| ||||||||||||||  | | ||||  |||||| ||| ||| |||||||||||||||||||    
T  3694075 actaaagtgaaagtacaaaatggtcactttgatccctgaataaaaaattaatctcctcaaattgaatctcaaatcc 3694000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 218 - 284
Target Start/End: Original strand, 2591703 - 2591769
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgat 284  Q
    ||||||||||||||| |||| | |||| ||| ||||| || ||||| | ||||||||||||||||||    
T  2591703 gtctctgactctgcacttccatgatcactttagtccctgatgttaagttattctgttaagtgatgat 2591769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 225 - 287
Target Start/End: Original strand, 52317062 - 52317124
Alignment:
Q  225 actctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||  |||||||||||||| ||||  |||||||||  | |||||||||||||||||||    
T  52317062 actctgcacctccgttatcattttagtccatgacgttaaaaaaatctgttaagtgatgatgtg 52317124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 222 - 292
Target Start/End: Original strand, 55388153 - 55388223
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacaca 292  Q
    ||||||||||| | ||||||||| ||| ||||| |||||||||  | | ||||||||||||||||| ||||    
T  55388153 ctgactctgcactcccgttatcactttagtccctgacgttaaaaaaatttgttaagtgatgatgtgtcaca 55388223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Complemental strand, 33428410 - 33428329
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||| | |||||| |||||||||||||| || | | ||| ||||||||||||| | || ||||||||||| ||| |||||    
T  33428410 actaaaatgaaagtaaaaaatggtcactttagtccctcaacaaaaaatcaatatctcaaacttgaatctcaattccctaaat 33428329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 279
Target Start/End: Complemental strand, 49261584 - 49261523
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtg 279  Q
    |||||| |||||||||||||||||||| ||| ||| | |||||||| | ||||| |||||||    
T  49261584 gtctctaactctgcatttccgttatcactttagtctctgacgttaatttattctattaagtg 49261523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 396 - 432
Target Start/End: Original strand, 8168539 - 8168575
Alignment:
Q  396 tctcaaatccttaaatccctaaatctcaaatccttaa 432  Q
    |||||||||| |||| |||||||||||||||||||||    
T  8168539 tctcaaatccctaaacccctaaatctcaaatccttaa 8168575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 311 - 359
Target Start/End: Original strand, 34263954 - 34264002
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttt 359  Q
    |||||||| ||||||| |||  ||||| |||||||||||||||||||||    
T  34263954 catataagatgtcacaagaatcaaagtaaaagtagaaaatggtcacttt 34264002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 293
Target Start/End: Original strand, 50753896 - 50753968
Alignment:
Q  221 tctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacat 293  Q
    ||||||||| || ||| ||||||| ||| ||||| | |||||||  | ||||||||||||||||||| |||||    
T  50753896 tctgactctacacttctgttatcactttagtccctgccgttaaaaaaatctgttaagtgatgatgtggcacat 50753968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 223 - 287
Target Start/End: Complemental strand, 53959142 - 53959078
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||||||||| ||||||||||| ||| ||| | |||||||||  | | |||||||||||||||||    
T  53959142 tgactctgcacttccgttatcactttagtctctgacgttaaaaaaatttgttaagtgatgatgtg 53959078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0767
Description:

Target: scaffold0767; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 222 - 419
Target Start/End: Original strand, 5679 - 5874
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtg 321  Q
    |||||||| || ||||||||||| ||| ||| | | |||||||| ||| ||||| ||||||||| |||||||||||||||||||||||||  || |||||    
T  5679 ctgactctacacttccgttatcactttagtctctggcgttaaataattatgttatgtgatgatgcgacacatattttacgatgacatgac--atgaggtg 5776  T
Q  322 tcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaat 419  Q
    ||||||  |||||||| |||||| ||| ||||||||||  | | |||||||||||||||||||| |||||| |||||||||||| ||| ||| |||||    
T  5777 tcacatagactaaagtgaaagtaaaaagtggtcactttgatccctgaaccaaaaatcaatatcctcaaattaaatctcaaatccctaattccttaaat 5874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0767; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 273 - 433
Target Start/End: Complemental strand, 6242 - 6085
Alignment:
Q  273 ttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaacca 372  Q
    |||||||||||||||||| |  |||||| |||||||||||||| ||||| |||||| |   |||| |||||| |||||||||||||| || | |||||||    
T  6242 ttaagtgatgatgtgacataggttttacaatgacatgacatatgaggtgacacatgga---aagtgaaagtaaaaaatggtcactttggtccctgaacca 6146  T
Q  373 aaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaaa 433  Q
    |||||||||||||||||||  |||||||||| | |||||||||||||||||||||| ||||    
T  6145 aaaatcaatatccccaaatataatctcaaattcctaaatccctaaatctcaaatccctaaa 6085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 83; Significance: 4e-39; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 256 - 426
Target Start/End: Original strand, 79187 - 79357
Alignment:
Q  256 gacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtca 355  Q
    |||||||||| ||| ||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||| | |||||| | |||| |||||||| |||    
T  79187 gacgttaaataattttgttaagtgatgatgtgacacatgttttacgatgacatgacatatgaggtctcacagggactaaaatgaaagaagaaaatgatca 79286  T
Q  356 cttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaat 426  Q
    |||| || | ||||  |||||||||||| || |||||||||||| ||| | ||||||| ||||||||||||    
T  79287 ctttggtccctgaataaaaaatcaatatgcctaaattgaatctcgaattcctaaatccttaaatctcaaat 79357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 218 - 298
Target Start/End: Complemental strand, 79730 - 79650
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatatttt 298  Q
    |||| ||||||||||||||  |||||||||| |||   |||||||||| ||| | ||||||||||||||||||||| ||||    
T  79730 gtctttgactctgcatttctattatcattttagtctttgacgttaaataattttattaagtgatgatgtgacacatgtttt 79650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 40)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 223 - 412
Target Start/End: Original strand, 9537103 - 9537292
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgt 322  Q
    ||||| |||| |||| |||||| ||| ||| | |||||||||| ||| || |||||||||||||| ||||| |||||||| |||| | ||||| | ||||    
T  9537103 tgactgtgcacttccattatcactttagtcactgacgttaaataattatggtaagtgatgatgtggcacatgttttacgacgacaagtcatatgatgtgt 9537202  T
Q  323 cacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    ||||   |||||||| |||||||||||| ||||||||  | | |||| ||||||||||||||||||||||||||||||||||| ||||||    
T  9537203 cacagtgactaaagtgaaagtagaaaatagtcactttgatccctgaatcaaaaatcaatatccccaaattgaatctcaaatccctaaatc 9537292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 2464818 - 2464940
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | ||||||||||||||||||||||||||||||| |||||||| ||||    
T  2464818 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatccccaaattgaatatcaaatccctaaa 2464917  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| ||||||| |||||||||||    
T  2464918 tccttaaatcttaaatccttaaa 2464940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 310 - 433
Target Start/End: Original strand, 32640436 - 32640559
Alignment:
Q  310 acatataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaa 409  Q
    ||||||||||||||||| | || ||||| ||||||||||||||||||||| || |||||||||||||||||||| || ||||||||| |||||| | |||    
T  32640436 acatataaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccttgaaccaaaaatcaatattccaaaattgaatatcaaattcctaa 32640535  T
Q  410 atccctaaatctcaaatccttaaa 433  Q
    |||| |||||||||||||| ||||    
T  32640536 atccttaaatctcaaatccctaaa 32640559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 218 - 359
Target Start/End: Complemental strand, 9538096 - 9537955
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||||||| | |||| ||||||||||||||| ||| | || ||||||| ||| ||||||||||| ||||||||||| ||||||||||| ||||||||| |    
T  9538096 gtctctgattgtgcacttccgttatcattttagtctctgatgttaaataattatgttaagtgattatgtgacacatgttttacgatgatatgacatatga 9537997  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttt 359  Q
     || ||||||| |||||||| |||||| ||||||||||||||    
T  9537996 tgtttcacatggactaaagtgaaagtataaaatggtcacttt 9537955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 8074599 - 8074721
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| ||||||||  |||    
T  8074599 catatgaggtgtcacaggtaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaaatccccaaa 8074698  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||||| ||||| |||||    
T  8074699 tccctaaatcttaaatctttaaa 8074721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 28591087 - 28590964
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaa-tcaatatccccaaattgaatctcaaatccttaa 409  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| || | ||||||||||| ||||||| |||||||||||| |||||| |||||    
T  28591087 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaaatcaatattcccaaattgaatatcaaattcttaa 28590988  T
Q  410 atccctaaatctcaaatccttaaa 433  Q
    |||| |||||||||||||| ||||    
T  28590987 atccttaaatctcaaatccctaaa 28590964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 14889918 - 14890040
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||| | | || ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||| |||| ||  ||||    
T  14889918 catatgaggtgtcatagggaccaaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaatatcaattcgctaaa 14890017  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||||| |||||||||||    
T  14890018 tccctaaatcttaaatccttaaa 14890040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 218 - 433
Target Start/End: Original strand, 18004714 - 18004925
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataa 317  Q
    |||| |||||||||| ||||||||||| ||| ||| | || |||||||  || ||||||||||| ||| || | |  || |||||||||| | ||| | |    
T  18004714 gtctatgactctgcacttccgttatcactttagtctctgatgttaaatagttatgttaagtgataatgcgatataagttgtacgatgacaaggcatgtga 18004813  T
Q  318 ggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaa 417  Q
    |||||||||   |||||| | |||||||||||| |||||||| || | |||| ||||| |||||||||||||||||||| |||||||| |||||||        
T  18004814 ggtgtcacagagactaaaatgaaagtagaaaatagtcactttggtccctgaatcaaaattcaatatccccaaattgaatatcaaatccctaaatcc---- 18004909  T
Q  418 atctcaaatccttaaa 433  Q
    ||||||||||||||||    
T  18004910 atctcaaatccttaaa 18004925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 25590579 - 25590701
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||| ||   |||||||||||||||||| |||||||||||| |||||| | ||||    
T  25590579 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcactttggtctctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 25590678  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  25590679 tccttaaatctcaaatccataaa 25590701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 433
Target Start/End: Original strand, 40611409 - 40611531
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||||||||  || | |||||||||||||||||| |||||||||||| |||||| | ||||    
T  40611409 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcacttgggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 40611508  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  40611509 tccttaaatctcaaatccctaaa 40611531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 40612633 - 40612511
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||||||||||||| ||||| || | |||||||||||||||||| ||||||||||||  ||||||| ||||    
T  40612633 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatggttactttggtccctgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaa 40612534  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||||||||||| |||||| ||||    
T  40612533 tccctaaatcttaaatccctaaa 40612511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 429
Target Start/End: Original strand, 544797 - 544915
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | |  ||||| |||||||||||| |||| ||  |||| |||||||||||||||||| |||||||||||| |||||| | ||||    
T  544797 catatgaggtgtcacagggatcaaagtgaaagtagaaaatagtcatttgggttcctgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 544896  T
Q  411 tccctaaatctcaaatcct 429  Q
    |||||||||||||||||||    
T  544897 tccctaaatctcaaatcct 544915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 433
Target Start/End: Complemental strand, 2466747 - 2466625
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| ||||||| |||| || ||||| |||||||||||| |||| ||| || | |||||||||| ||||||| |||||||||||| |||||| ||||||    
T  2466747 catatgaggtgtcccatggaccaaagtgaaagtagaaaatagtcattttggtccctgaaccaaaattcaatattcccaaattgaatatcaaattcttaaa 2466648  T
Q  411 tccctaaatctcaaatccttaaa 433  Q
    ||| |||||||||||||| ||||    
T  2466647 tccttaaatctcaaatccctaaa 2466625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 311 - 429
Target Start/End: Complemental strand, 8075807 - 8075689
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| ||||| ||||||| ||||||| || | |||||||||||||||||| |||||||||||| |||||| | || |    
T  8075807 catatgaggtgtcacaaggaccaaagtgaaagtcgaaaatgatcactttggtccctgaaccaaaaatcaatattcccaaattgaatatcaaattcctata 8075708  T
Q  411 tccctaaatctcaaatcct 429  Q
    |||||||||||||||||||    
T  8075707 tccctaaatctcaaatcct 8075689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 261 - 406
Target Start/End: Original strand, 18400297 - 18400442
Alignment:
Q  261 taaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcactttt 360  Q
    ||||| ||| ||||||||||||||||| | ||  |||||| |||||||||||||| |||||||||||| | |||||  |||||||||||||  ||||||     
T  18400297 taaataattatgttaagtgatgatgtggctcaggttttacaatgacatgacatatcaggtgtcacatggagtaaagcgaaagtagaaaatgaccacttta 18400396  T
Q  361 gttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcct 406  Q
     ||| | || |||||| |||||||||||| || |||||||||||||    
T  18400397 attcctaaatcaaaaaacaatatccccaacttaaatctcaaatcct 18400442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 314 - 420
Target Start/End: Original strand, 34173432 - 34173538
Alignment:
Q  314 ataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcc 413  Q
    ||||||| ||||| | |||||| | ||||||||||||| ||||||| ||   ||||||||||||||||||||||||||||||| |||||||  |||||||    
T  34173432 ataaggtatcacagggactaaactgaaagtagaaaatgatcactttggtctctgaaccaaaaatcaatatccccaaattgaatttcaaatcactaaatcc 34173531  T
Q  414 ctaaatc 420  Q
    |||||||    
T  34173532 ctaaatc 34173538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 546010 - 545909
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| |||||||||||| |||||||| || |||||||||||||||||||| ||||||||||||  ||||||| ||||    
T  546010 catatgaggtgtcacaaggaccaaagtgaaagtagaaaatagtcactttggtccttgaaccaaaaatcaatatgcccaaattgaataacaaatccctaaa 545911  T
Q  411 tc 412  Q
    ||    
T  545910 tc 545909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 237 - 402
Target Start/End: Original strand, 16979087 - 16979252
Alignment:
Q  237 cgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaag 336  Q
    |||||||||||| ||| |  ||||||| | ||||||||||||||||||||||||||  |  ||| |||||||| ||||| |  ||| | | | |||||||    
T  16979087 cgttatcattttagtctctaacgttaagttattctgttaagtgatgatgtgacacagttggtacaatgacatgtcatatgaaatgtaatagggactaaag 16979186  T
Q  337 ttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaa 402  Q
    | ||  || |||||||||||||| |||| |||| ||||||||||||||| |||| |||||||||||    
T  16979187 tgaagataaaaaatggtcactttggttcctgaatcaaaaatcaatatcctcaaactgaatctcaaa 16979252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 419
Target Start/End: Complemental strand, 14891121 - 14891013
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| | ||||||||||||||||||| || | |||| ||||||||||||| |||||||||||| |||||| | ||||    
T  14891121 catatgaggtgtcacaaggaccaaagtgatagtagaaaatggtcactttagtccctgaatcaaaaatcaatattcccaaattgaatttcaaattcctaaa 14891022  T
Q  411 tccctaaat 419  Q
    |||||||||    
T  14891021 tccctaaat 14891013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 333 - 433
Target Start/End: Original strand, 28589870 - 28589970
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatccctaaatctcaaatccttaa 432  Q
    ||||| ||||||||||||||||||||| || | |||||||||||||||||| || ||||||||| |||||||  |||||| ||||| || ||||||||||    
T  28589870 aaagtaaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatataccaaaattgaatatcaaatcactaaatctctaaaccttaaatccttaa 28589969  T
Q  433 a 433  Q
    |    
T  28589970 a 28589970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 229 - 353
Target Start/End: Complemental strand, 30970621 - 30970497
Alignment:
Q  229 tgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatg 328  Q
    |||||||| ||||||| ||| |||||  || |||||| ||||||||||  ||||| |||||| || ||||| | ||||||||||||| | || ||||| |    
T  30970621 tgcatttctgttatcactttagtccctaacattaaataattctgttaaccgatgacgtgacaaatgttttatgctgacatgacatatgatgtatcacaag 30970522  T
Q  329 aactaaagttaaagtagaaaatggt 353  Q
    ||||||||| |||||||||||||||    
T  30970521 aactaaagtaaaagtagaaaatggt 30970497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 395
Target Start/End: Original strand, 4593031 - 4593093
Alignment:
Q  333 aaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaa 395  Q
    ||||| ||||||||||||||||||||| || | |||||||||||||||||| |||||||||||    
T  4593031 aaagtgaaagtagaaaatggtcactttggtccctgaaccaaaaatcaatatgcccaaattgaa 4593093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 256 - 350
Target Start/End: Complemental strand, 27720925 - 27720832
Alignment:
Q  256 gacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaat 350  Q
    |||||||||| ||||||||||||||||||||||||||| |||||| ||||||| |||||| | || ||| ||| |||||||| ||| | ||||||    
T  27720925 gacgttaaataattctgttaagtgatgatgtgacacatgttttacaatgacat-acatatgatgtatcaaatggactaaagtgaaaattgaaaat 27720832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 311 - 412
Target Start/End: Complemental strand, 4594075 - 4593974
Alignment:
Q  311 catataaggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    ||||| |||||||||| | || ||||| |||||||||||||||||   | || | |||||||||||||||||| |||||||||||| |||||| | ||||    
T  4594075 catatgaggtgtcacagggaccaaagtgaaagtagaaaatggtcatcgtagtccatgaaccaaaaatcaatattcccaaattgaatatcaaattcctaaa 4593976  T
Q  411 tc 412  Q
    ||    
T  4593975 tc 4593974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 382
Target Start/End: Complemental strand, 32555561 - 32555430
Alignment:
Q  250 gtcccagacgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaa 349  Q
    ||||| |||||||||| ||| |||||| ||||||| ||||| |  ||||| | ||||| |   ||| |||||||||||| |||||||| |||||||||||    
T  32555561 gtccccgacgttaaataattatgttaattgatgatatgacaaaggttttatgctgacaaggagtatgaggtgtcacatggactaaagtgaaagtagaaaa 32555462  T
Q  350 tggtcacttttgttcttgaaccaaaaatcaata 382  Q
    | ||||| || |||| |||||| ||||||||||    
T  32555461 ttgtcac-ttggttcctgaaccgaaaatcaata 32555430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 222 - 287
Target Start/End: Original strand, 4592941 - 4593006
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||||||||| ||| ||||| |||||||||  | |||||||||||||||||||    
T  4592941 ctgactctgcacttccgttatcactttagtccctgacgttaaaaaaatctgttaagtgatgatgtg 4593006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 317 - 400
Target Start/End: Complemental strand, 578720 - 578637
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctca 400  Q
    |||||| ||||| |||||| | |||||| | |||| ||||||| || | |||||| |||||||||||||| |||||||||||||    
T  578720 aggtgtgacatggactaaaatgaaagtaaagaatgatcactttggtccctgaaccgaaaatcaatatccctaaattgaatctca 578637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 330 - 405
Target Start/End: Original strand, 16611876 - 16611951
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatcc 405  Q
    |||||||| || |||||||||| |||||||  | | |||||||||||||||||||||||  || ||||||||||||    
T  16611876 actaaagtgaatgtagaaaatgatcactttaatccctgaaccaaaaatcaatatccccaccttaaatctcaaatcc 16611951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 330 - 411
Target Start/End: Original strand, 19271530 - 19271612
Alignment:
Q  330 actaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaat-caatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||| |||||||||||| |||||||| || | |||||  ||||| ||||||||||||||| ||| |||||||| |||||    
T  19271530 actaaagtgaaagtagaaaattgtcactttagtccctgaactgaaaattcaatatccccaaattaaatatcaaatccataaat 19271612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 339 - 413
Target Start/End: Complemental strand, 32641673 - 32641599
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatcc 413  Q
    |||||| |||||||| |||||  | | | ||||||||||||||||||||||||||||| | |||||| |||||||    
T  32641673 aaagtaaaaaatggttactttgatccctcaaccaaaaatcaatatccccaaattgaatatgaaatccctaaatcc 32641599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 320 - 385
Target Start/End: Complemental strand, 13651106 - 13651041
Alignment:
Q  320 tgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatcc 385  Q
    ||||||| | |||||||| |||||| |||||||||||||| || | |||||| |||||||||||||    
T  13651106 tgtcacagggactaaagtgaaagtaaaaaatggtcactttagtccctgaaccgaaaatcaatatcc 13651041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 398
Target Start/End: Complemental strand, 12445363 - 12445284
Alignment:
Q  319 gtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatct 398  Q
    |||||||||| |||||||| ||||||||||||| ||||||   | | ||||| ||||||||||||| | ||||| |||||    
T  12445363 gtgtcacatggactaaagtaaaagtagaaaatgatcacttcgatacctgaacaaaaaatcaatatctctaaattaaatct 12445284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 223 - 289
Target Start/End: Complemental strand, 546078 - 546012
Alignment:
Q  223 tgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgac 289  Q
    |||||||||| ||||||||||| ||| ||||| |||||||||  | | |||||||||||||| ||||    
T  546078 tgactctgcacttccgttatcactttagtccctgacgttaaaaaaatttgttaagtgatgatatgac 546012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 350 - 412
Target Start/End: Complemental strand, 2314449 - 2314387
Alignment:
Q  350 tggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaatc 412  Q
    |||||||||| || | |||||||||| | |||||||||||||||||| |||||| | ||||||    
T  2314449 tggtcactttggtccctgaaccaaaatttaatatccccaaattgaatatcaaattcctaaatc 2314387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 383
Target Start/End: Original strand, 37072733 - 37072799
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatat 383  Q
    |||||||||||| || ||| | |||||||||||| |||||||| || | |||||| |||||||||||    
T  37072733 aggtgtcacatggaccaaaatgaaagtagaaaatagtcactttagtccctgaaccgaaaatcaatat 37072799  T

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Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 14891194 - 14891125
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||||||||||| || ||||||||||| ||| ||| | |||||||||  | | |||||||||||||||||    
T  14891194 gtctctgactctacacttccgttatcactttagtctctgacgttaaaaaaatatgttaagtgatgatgtg 14891125  T

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Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 218 - 287
Target Start/End: Complemental strand, 19186267 - 19186198
Alignment:
Q  218 gtctctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    |||||||||||| |||||||||||||| ||| ||||  | |||||||  | ||||||||| |||||||||    
T  19186267 gtctctgactctacatttccgttatcactttagtccttgtcgttaaaacaatctgttaagcgatgatgtg 19186198  T

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Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 258 - 411
Target Start/End: Original strand, 21069405 - 21069557
Alignment:
Q  258 cgttaaatgattctgttaagtgatgatgtgacacatattttacgatgacatgacatataaggtgtcacatgaactaaagttaaagtagaaaatggtcact 357  Q
    |||||||  ||| ||||||||||||||||| |||||   ||| | ||||| |   ||| | |||||| ||| | |||||| ||||||||||||||||| |    
T  21069405 cgttaaaaaattttgttaagtgatgatgtggcacatgacttatgttgacaaggagtatgacgtgtcatatggattaaagtgaaagtagaaaatggtca-t 21069503  T
Q  358 tttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    ||  | | |||||  ||||||||||| | ||| ||||||||||||||| |||||    
T  21069504 ttgatccctgaactgaaaatcaatattctcaacttgaatctcaaatccctaaat 21069557  T

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Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 287
Target Start/End: Complemental strand, 32641769 - 32641704
Alignment:
Q  222 ctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtg 287  Q
    ||||||||||| ||||||||||| |||  |||| |||||||||  | | |||||||||||||||||    
T  32641769 ctgactctgcacttccgttatcactttaatccctgacgttaaaaaaatatgttaagtgatgatgtg 32641704  T

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Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 221 - 289
Target Start/End: Complemental strand, 8075877 - 8075809
Alignment:
Q  221 tctgactctgcatttccgttatcattttcgtcccagacgttaaatgattctgttaagtgatgatgtgac 289  Q
    ||||| |||||| || |||||||| ||| ||||| |||||| ||  | |||||||||||||||||||||    
T  8075877 tctgattctgcactttcgttatcactttagtccctgacgtttaaaaaatctgttaagtgatgatgtgac 8075809  T

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Target: scaffold0016 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 410
Target Start/End: Complemental strand, 36471 - 36400
Alignment:
Q  339 aaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaa 410  Q
    |||||||||||||||||||||  | | |||||| |||||||||||||  |||||||| ||||||||| ||||    
T  36471 aaagtagaaaatggtcactttgatccctgaaccgaaaatcaatatcctaaaattgaaactcaaatccctaaa 36400  T

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Target: scaffold0369 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 411
Target Start/End: Original strand, 8675 - 8768
Alignment:
Q  317 aggtgtcacatgaactaaagttaaagtagaaaatggtcacttttgttcttgaaccaaaaatcaatatccccaaattgaatctcaaatccttaaat 411  Q
    |||||||||||| | ||||||  ||||| | |||| |||||||  | | |||||||||||||||||||||||| || |||||||||||| |||||    
T  8675 aggtgtcacatggaataaagtggaagtaaagaatgttcactttaat-cgtgaaccaaaaatcaatatccccaacttaaatctcaaatccctaaat 8768  T

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Target: scaffold0026 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 93028 - 92987
Alignment:
Q  373 aaaatcaatatccccaaattgaatctcaaatccttaaatccc 414  Q
    |||||||||||||||||||| ||||| |||||||||||||||    
T  93028 aaaatcaatatccccaaattaaatctaaaatccttaaatccc 92987  T

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