View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF1397_low_10 (Length: 204)

Name: NF1397_low_10
Description: NF1397
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF1397_low_10
NF1397_low_10
[»] chr7 (1 HSPs)
chr7 (1-61)||(27154627-27154687)


Alignment Details
Target: chr7 (Bit Score: 57; Significance: 5e-24; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 5e-24
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27154627 - 27154687
Alignment:
1 tccttgctacaccatagaaacaatgctcactccccagtttgctctcggtgtggtctctctg 61  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
27154627 tccttgctacaccatagaaacaatgctcactcccaagtttgctctcggtgtggtctctctg 27154687  T

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