View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13981_high_8 (Length: 259)
Name: NF13981_high_8
Description: NF13981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13981_high_8 |
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Alignment Details
Target: chr1 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 11 - 243
Target Start/End: Complemental strand, 31486819 - 31486587
Alignment:
| Q |
11 |
cagagaaagatgatggcaaaccggtgttgtcatcaccgtcaccggttaaagagatcaaaagtgaaacaaaacaagtccttcctgttctggaacttaagga |
110 |
Q |
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| T |
31486819 |
cagagaaagatgatggcaaaccggtgttttcatcaccgtcaccggttaaagagatcaaaagtgaaacaaaacaagtccttcctgttctggaacttaagga |
31486720 |
T |
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| Q |
111 |
aggtacaaggtcttcatggaaattctcaagagaggctcctaggctttctttagatagcagagcagttgttgatgccaaaggagggcttcaccctagagag |
210 |
Q |
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| T |
31486719 |
aggtacaaggtcttcatggaaattctcaagagaggctcctaggctttctttagatagcagagcagttgttgatgccaaaggagggcttcaccctagagag |
31486620 |
T |
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| Q |
211 |
atccgaacaaatgcaactgctaatcttgagaac |
243 |
Q |
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| T |
31486619 |
atccgaacaaatgcaactgctaatcttgagaac |
31486587 |
T |
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