View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13982_high_21 (Length: 309)
Name: NF13982_high_21
Description: NF13982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13982_high_21 |
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Alignment Details
Target: chr8 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 17 - 291
Target Start/End: Original strand, 43535238 - 43535512
Alignment:
| Q |
17 |
catcataagtaggatacattgacaaggaaggaatgaacctaggctcagcaatgaaagtacgaaacgcaagtgatatagcaagagcagcaaacacagtttt |
116 |
Q |
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| T |
43535238 |
catcataagtaggatacattgacaaggaaggaatgaacctaggctcagcaatgaaagtacgaaacgcaagtgatatagcaagagcagcaaacacagtttt |
43535337 |
T |
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| Q |
117 |
cgcatcatcagaagtaaaattcaaccaatcaggaaaaggtcccgacgactcatttttcttatccacatcccggtcaccaccaccaccgtcgccgtcacct |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||| |
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| T |
43535338 |
cgcatcatcagaagtaaaattcaaccaatcaggaaaaggtcccgacgactcatttttcttatccacctcccggtcaccaccaccaccgtcgccgccacct |
43535437 |
T |
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| Q |
217 |
ccgccggagtctttcaaagctttactacatggaattctacggcgaagagttgaagaggttttgtagagatgggga |
291 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43535438 |
ccgccggagtctttcaaagctttactacatggaattctacggcgaagagttgaagaggttttgtagagatgggga |
43535512 |
T |
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