View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13982_high_30 (Length: 234)
Name: NF13982_high_30
Description: NF13982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13982_high_30 |
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Alignment Details
Target: chr2 (Bit Score: 188; Significance: 1e-102; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 42873100 - 42873322
Alignment:
| Q |
1 |
aataaataaatgataaaaataagttgacaagcttcttgaccatgtttattattgttcgcaaaagggatcttttttcttacaattcttatcaaatcaaatg |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
42873100 |
aataaataaatgataaaaataagttgacaagcttcttgaccatgtttattattgttcacaaaagggatcttttttcttacaattcttatcaaatcaaatg |
42873199 |
T |
|
| Q |
101 |
ttgtaaataaaatgaaactttgtatacttcaatgaaacttgaggtaccaataaaagaacattatgtctatcattcttctttaattagtatcacta--gct |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || || |
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| T |
42873200 |
ttgtaaataaaatgaaactttgtatacttcaatgaaacttgaggtaccaataaaagaacattatgtctatcatttttctttaattagtattagtatcact |
42873299 |
T |
|
| Q |
199 |
acttcttaggtctagttgatttt |
221 |
Q |
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||||||||||| ||||||||||| |
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| T |
42873300 |
acttcttaggtttagttgatttt |
42873322 |
T |
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