View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13982_low_31 (Length: 236)
Name: NF13982_low_31
Description: NF13982
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13982_low_31 |
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Alignment Details
Target: chr2 (Bit Score: 146; Significance: 5e-77; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 37658272 - 37658442
Alignment:
| Q |
1 |
gaaaatggtgatttggnnnnnnngctatggacctatggtaggaagattcggtacttatgaaaccgtttttatgttgcagtcgattccgtactcttagatt |
100 |
Q |
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| T |
37658272 |
gaaaatggtgatttggaaaaaaagctatggacctatggtaggaagattcggtacttatgaaaccgtttttatgttgcagtcgattccgtactcttagatt |
37658371 |
T |
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| Q |
101 |
aagagaatatgtaatttcttaatctattagcaaacaatcggctgcactataaattcagttgtagacaattc |
171 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
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| T |
37658372 |
aagagaatatgtaatttcttaatctattagcaaacaatcggctgcactacaaattcagttgtagacaattc |
37658442 |
T |
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