View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13984_high_30 (Length: 288)
Name: NF13984_high_30
Description: NF13984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13984_high_30 |
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Alignment Details
Target: chr1 (Bit Score: 258; Significance: 1e-144; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 258; E-Value: 1e-144
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 37342804 - 37342547
Alignment:
| Q |
15 |
atatagttaactattttgagtatacttttttaggtgtattttgagtatacaatcaatactatatttatatcaagaaataatttataagtcataacacaat |
114 |
Q |
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| T |
37342804 |
atatagttaactattttgagtatacttttttaggtgtattttgagtatacaatcaatactatatttatatcaagaaataatttataagtcataacacaat |
37342705 |
T |
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| Q |
115 |
tttgtcccgctgcataggatccttcacagctaatacgagtattctaaaattatggtatcactctacaactaaatagtcaattaaactatgatatttttat |
214 |
Q |
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| T |
37342704 |
tttgtcccgctgcataggatccttcacagctaatacgagtattctaaaattatggtatcactctacaactaaatagtcaattaaactatgatatttttat |
37342605 |
T |
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| Q |
215 |
attaagaagtacacagcatactaatctgcaaaacgtcatagaaagcagagtttctttt |
272 |
Q |
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| T |
37342604 |
attaagaagtacacagcatactaatctgcaaaacgtcatagaaagcagagtttctttt |
37342547 |
T |
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