View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13984_high_33 (Length: 267)
Name: NF13984_high_33
Description: NF13984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13984_high_33 |
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Alignment Details
Target: chr5 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 71 - 249
Target Start/End: Original strand, 10011087 - 10011264
Alignment:
| Q |
71 |
ttcttaaacttgcatagttcatcaaaaagtagaaattgcaatgcagtgaacaaaaatagtaatatttgactagaatcgaaaactttatacgcaaaataac |
170 |
Q |
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| T |
10011087 |
ttcttaaacttgcatagttcatcaaagagtagaaattgcaatg-agtgaacaaaaatagtaatatttgactagaatcgaaaactttatacgcaaaataac |
10011185 |
T |
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| Q |
171 |
aagaataacgagtgataataacagtaatgataaagtgaagtttgatgttcgagaatgaaggaagaagaggaaaacctag |
249 |
Q |
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| T |
10011186 |
aagaataacgagtgataataacagtaatgataaagtgaagtttgatgttcgagaatgaaggaagaagaggaaaacctag |
10011264 |
T |
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