View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13984_high_34 (Length: 267)
Name: NF13984_high_34
Description: NF13984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13984_high_34 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 8 - 251
Target Start/End: Complemental strand, 36459122 - 36458879
Alignment:
| Q |
8 |
catcatcatgaccaaagtgaaggagaaagatgcttcaactaaacctattaagattcgtcaggtgtgggctgaaaatctgaagcgtgaatttgatcttata |
107 |
Q |
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||||||||||||||||||||||||| | |||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
36459122 |
catcatcatgaccaaagtgaaggaggaggatgcttcaaataaacctattaagattcgtcaggtgtgggctgaaaatctggagcgtgaatttgatcttata |
36459023 |
T |
|
| Q |
108 |
agaaatttcgttcacatgtttccctatgtatcaatggataccgagtttcctggtgtcgtcgttgcacctaactttgatcccaatataccgtatcacctcc |
207 |
Q |
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||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36459022 |
agagatttcgttcacatgtttccctatgtatcaatggataccgagtttcctggtgtcgtcgttgcacctaactttgatcccaatataccgtatcacctcc |
36458923 |
T |
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| Q |
208 |
gccatatggatccatcagaacagtacagtttcttgaaggctaac |
251 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36458922 |
gccatatggatccatcagaacagtacagtttcttgaaggctaac |
36458879 |
T |
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