View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13984_high_8 (Length: 521)
Name: NF13984_high_8
Description: NF13984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13984_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 422; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 422; E-Value: 0
Query Start/End: Original strand, 12 - 496
Target Start/End: Original strand, 42243849 - 42244334
Alignment:
| Q |
12 |
atgaatatatattcaaacttaatctcatctaatgtgggattttcaacaacttacatataactaatgatgttcgattttatctcttagactttgattgtgc |
111 |
Q |
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| T |
42243849 |
atgaatacatgttcaaacttaatctcatctaatgtgggattttcaacaacttacatataactaatgatgtttgattttatctcttagactttgattgagc |
42243948 |
T |
|
| Q |
112 |
aaattaaatcttcaaagtattatcttgctaaactaagattctctatgattaccaatataatgtggcacaagtgctaagctaagggaatctcttaactatt |
211 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||| |
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| T |
42243949 |
aaattaaatcttcaaagtattatcttgctaaactaagattctctatgattaccaatataatgtggcacaagtgctaagctaagtgaatctcttaattatt |
42244048 |
T |
|
| Q |
212 |
tggtccaagatttgatcattggttagtgcatgaaaaaccatttgttgcaagagatcaaccttttaaataaatctcaatgaccttaaaatgattagtcttt |
311 |
Q |
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| T |
42244049 |
tggtccaagatttgatcattggttagtgcatgaaaaaacatttgttgtaagagatcaaccttttaaataaatctcaataaccttaaaatgattagtcttt |
42244148 |
T |
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| Q |
312 |
atagtcacgcacagaagatacgtttgatttactaaaaaagaaaagattttttatccttattatatataacacccagattttaaacaaacaaat-attatt |
410 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||| |
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| T |
42244149 |
atagtcacgcacagaagatacgtttgatttactaaaaaagaaaagattttttatccttattatatataacacccagattttaagcaaacaaatgattatt |
42244248 |
T |
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| Q |
411 |
tttgcttatatttgagtccatattataagcattcttatgcatagcgttcacttgatgacttatgtgcgtggttttccttatagtca |
496 |
Q |
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|||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||||||||| |
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| T |
42244249 |
tttgcttatatttgagtccatattataagccctcttatgcatagcattcacttgatgacttatgtgcatggttttccttatagtca |
42244334 |
T |
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