View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF13984_low_16 (Length: 395)
Name: NF13984_low_16
Description: NF13984
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13984_low_16 |
 | |
|
Alignment Details
Target: chr4 (Bit Score: 270; Significance: 1e-151; HSPs: 9)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 23 - 389
Target Start/End: Complemental strand, 14179057 - 14178691
Alignment:
| Q |
23 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn----tgaac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
14179057 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcaataaaaaaaatgaac |
14178958 |
T |
|
| Q |
119 |
accaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14178957 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
14178858 |
T |
|
| Q |
219 |
tccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttata |
318 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
14178857 |
tccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttata |
14178762 |
T |
|
| Q |
319 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14178761 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
14178691 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 22 - 389
Target Start/End: Complemental strand, 14174304 - 14173937
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn----tgaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
14174304 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagtgataaaaaaaatgaa |
14174205 |
T |
|
| Q |
118 |
caccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattct |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
14174204 |
caccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattct |
14174105 |
T |
|
| Q |
218 |
ctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttat |
317 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
14174104 |
ctccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttat |
14174009 |
T |
|
| Q |
318 |
agagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
14174008 |
agagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
14173937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 22 - 389
Target Start/End: Original strand, 28611566 - 28611933
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn----tgaa |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
28611566 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaatgaa |
28611665 |
T |
|
| Q |
118 |
caccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattct |
217 |
Q |
| |
|
||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28611666 |
caccaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattct |
28611765 |
T |
|
| Q |
218 |
ctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttat |
317 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
28611766 |
ctccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttat |
28611861 |
T |
|
| Q |
318 |
agagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28611862 |
agagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
28611933 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 23 - 389
Target Start/End: Original strand, 28606805 - 28607171
Alignment:
| Q |
23 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn----tgaac |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |
|
|
| T |
28606805 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaaattaac |
28606904 |
T |
|
| Q |
119 |
accaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
218 |
Q |
| |
|
|||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28606905 |
accaatatttaacgtgaaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
28607004 |
T |
|
| Q |
219 |
tccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttata |
318 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28607005 |
tccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttctattctaatgctattattttatagcacctagaagttata |
28607100 |
T |
|
| Q |
319 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
28607101 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
28607171 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 24 - 389
Target Start/End: Complemental strand, 44161949 - 44161586
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn----tgaaca |
119 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
44161949 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
44161850 |
T |
|
| Q |
120 |
ccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
44161849 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaat--tctct |
44161752 |
T |
|
| Q |
220 |
ccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatag |
319 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
44161751 |
ccactctcttacacacaca----agagatacaatatagtgtttcccgtaagacctacttctattctaatgctattattttatagcacctagaagttatag |
44161656 |
T |
|
| Q |
320 |
agatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||| |
|
|
| T |
44161655 |
agatgatacccacccggtgtatttttcccacactctctggatttactcaacactctattattcctctcac |
44161586 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 24 - 381
Target Start/End: Complemental strand, 11104829 - 11104477
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn-tgaacacca |
122 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||| |
|
|
| T |
11104829 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagctgtagcgataaaaatgaacacca |
11104730 |
T |
|
| Q |
123 |
atatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
222 |
Q |
| |
|
||||||||| | ||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||| |
|
|
| T |
11104729 |
atatttaacatagaaaatcctctaatatcgagggtaaa-ccacgggacaaactccgaaaaatattccaccatatctaagaatattacaatattctctcca |
11104631 |
T |
|
| Q |
223 |
ctctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
322 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||| ||| |||||| ||||||||||| ||||| ||||||||||||||||||| |
|
|
| T |
11104630 |
ctctcttacacacaa-----agagatacaatatagtgtttcccgtgagacccactcctattcaaatgctattattttataacacctagaagttatagaga |
11104536 |
T |
|
| Q |
323 |
tgatacccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
381 |
Q |
| |
|
||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
11104535 |
tgatatccacccggtgtatttttcctacactctctggatttactcaacactctattttt |
11104477 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 141; E-Value: 8e-74
Query Start/End: Original strand, 23 - 327
Target Start/End: Original strand, 48826701 - 48827000
Alignment:
| Q |
23 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnnt--gaacac |
120 |
Q |
| |
|
|||||||| |||||||||||||||||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||| |||||| |
|
|
| T |
48826701 |
ttgttgggatcgacgagcttaacgcaattgtaaattaaaatttcaaaattcaa--gagattggatcttgcagcgcagcggtagcgatagaaaaagaacac |
48826798 |
T |
|
| Q |
121 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
220 |
Q |
| |
|
||||||||||||||||||| |||||||||| |||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48826799 |
caatatttaacgtggaaaatcctctaataccgagggaaaaatcacgggacaa-ctccgaaaaatattccactatattaaagaatattacaatattctctt |
48826897 |
T |
|
| Q |
221 |
cactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttataga |
320 |
Q |
| |
|
| |||||| ||||||||||||||||||||||||||||| ||| ||||| ||||||||||| ||||||||||||||||||||||| |
|
|
| T |
48826898 |
cgctctct----tacacacacaagagatacaatatagtgtttcccgtgagattcactcctatttgaatgctattattttatagcacctagaagttataga |
48826993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 119 - 220
Target Start/End: Original strand, 48708155 - 48708256
Alignment:
| Q |
119 |
accaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
218 |
Q |
| |
|
||||||||||||| || ||||| || ||||||| || ||||||||||| |||||||||| ||||||||| || ||||||||| ||||||||||||||||| |
|
|
| T |
48708155 |
accaatatttaacatgaaaaactctataatactaagagaaaaaccacgtgacaaactccaaaaaatatttcattatattaaaaaatattacaatattctc |
48708254 |
T |
|
| Q |
219 |
tc |
220 |
Q |
| |
|
|| |
|
|
| T |
48708255 |
tc |
48708256 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 135 - 228
Target Start/End: Original strand, 24726288 - 24726381
Alignment:
| Q |
135 |
gaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctct |
228 |
Q |
| |
|
||||||| ||||||| |||||||| ||||| ||||||||| ||||||||||||| |||||||||||| || | ||||||||||||| ||||| |
|
|
| T |
24726288 |
gaaaaccatctaatatcaagggaaaagccacgagacaaactctgaaaaatattccattatattaaagaacataataatattctctccattctct |
24726381 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 269; Significance: 1e-150; HSPs: 5)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 22 - 389
Target Start/End: Complemental strand, 12931042 - 12930676
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn---tgaac |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |
|
|
| T |
12931042 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaac |
12930943 |
T |
|
| Q |
119 |
accaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
218 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12930942 |
accaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctc |
12930843 |
T |
|
| Q |
219 |
tccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttata |
318 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
12930842 |
tccactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttata |
12930747 |
T |
|
| Q |
319 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12930746 |
gagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
12930676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 24 - 389
Target Start/End: Complemental strand, 12935786 - 12935422
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn---tgaacac |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||||||||||||||| ||||||| |
|
|
| T |
12935786 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaattcaaaagaaactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
12935687 |
T |
|
| Q |
121 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12935686 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
12935587 |
T |
|
| Q |
221 |
cactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttataga |
320 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
12935586 |
cactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttttactctaatgctattattttatagcacctagaagttataga |
12935491 |
T |
|
| Q |
321 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
12935490 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
12935422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 158 - 228
Target Start/End: Original strand, 26504985 - 26505055
Alignment:
| Q |
158 |
aaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctccactctct |
228 |
Q |
| |
|
|||||||| | ||||||||| |||||||||| |||||| |||| |||||||||||||||| || ||||||| |
|
|
| T |
26504985 |
aaaaccacagtacaaactccaaaaaatattcaactataataaaaaatattacaatattctttcaactctct |
26505055 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 226
Target Start/End: Complemental strand, 15589060 - 15588948
Alignment:
| Q |
114 |
tgaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaata |
213 |
Q |
| |
|
|||||| ||||||||| || ||||||||||| || |||| |||||| || | ||||||||| ||||||||| |||| ||| ||| |||||||||| | |
|
|
| T |
15589060 |
tgaacatcaatatttattttgaaaaaccctctattaatgagagaaaaatcaagtgacaaactctaaaaaatatttcactttatcaaacaatattacaaca |
15588961 |
T |
|
| Q |
214 |
ttctctccactct |
226 |
Q |
| |
|
|| |||||||||| |
|
|
| T |
15588960 |
ttttctccactct |
15588948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 32 - 77
Target Start/End: Original strand, 26504850 - 26504895
Alignment:
| Q |
32 |
tcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa |
77 |
Q |
| |
|
|||||||| |||| | ||||||||||||||||| |||||||||||| |
|
|
| T |
26504850 |
tcgacgagtttaatggaagtgtaaattaaaatttcaaaatccaaaa |
26504895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 24 - 389
Target Start/End: Complemental strand, 34907503 - 34907139
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn---tgaacac |
120 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |
|
|
| T |
34907503 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagactggatcttgcagcgcagcggtagcgataaaaaaatgaacac |
34907404 |
T |
|
| Q |
121 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34907403 |
caatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
34907304 |
T |
|
| Q |
221 |
cactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttataga |
320 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
34907303 |
cactctctcacacacaca----agagatacaatatagtgtttcccgtgagacctacttttattctaatgctattattttatagcacctagaagttataga |
34907208 |
T |
|
| Q |
321 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
34907207 |
gatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
34907139 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 253; Significance: 1e-140; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 253; E-Value: 1e-140
Query Start/End: Original strand, 24 - 389
Target Start/End: Original strand, 37040426 - 37040791
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn----tgaaca |
119 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||| |
|
|
| T |
37040426 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaaagactggatcttgcagcgcagcggtagcgataaaaaaaatgaaca |
37040525 |
T |
|
| Q |
120 |
ccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctct |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
37040526 |
ccaatatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattttct |
37040625 |
T |
|
| Q |
220 |
ccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatag |
319 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
37040626 |
ccactctctcacacacaca----agagatacaatatagtgttttccgtgagacctacttctattctaatgctattattttatagcacctagaagttatag |
37040721 |
T |
|
| Q |
320 |
agatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
37040722 |
agatgatacccacccgatgtatttttcccacactctctggatttactcaacactctatttttcctctcac |
37040791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 22 - 378
Target Start/End: Complemental strand, 15290596 - 15290243
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaa-gagattggatcttgcagcgcagcggtagcnnnnnnn----tga |
116 |
Q |
| |
|
|||||||||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||| |||| ||| |
|
|
| T |
15290596 |
cttgttgggctcgacgagcttaacgcaattgtaaattaaaatttcaaaatccaaaaagagattggatcttgcagcgcagccttagcgataaaaaaaatga |
15290497 |
T |
|
| Q |
117 |
acaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattc |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||| ||| || |||||||||||| |||||||||||||||||| |
|
|
| T |
15290496 |
acaccaatatttaacgtggaaaaccctctaataccgaggtataaaccacgggacaaactccaaaagattttccactatatttaagaatattacaatattc |
15290397 |
T |
|
| Q |
217 |
tctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagtta |
316 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||||| ||| |||||| |||||||| |||| ||||||||||||||| |
|
|
| T |
15290396 |
tctccactctct----tacacacacaagagatacaatatagtgttt-ccgtgagacccactcctattcgaatgctat--tatttcagcacctagaagtta |
15290304 |
T |
|
| Q |
317 |
tagagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatt |
378 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||| |
|
|
| T |
15290303 |
tagagatgatacccacccggtgtattttt-ccacactttctggatttagtcaacactctatt |
15290243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 106; E-Value: 6e-53
Query Start/End: Original strand, 24 - 328
Target Start/End: Complemental strand, 12099361 - 12099060
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn-tgaacacca |
122 |
Q |
| |
|
|||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||| ||||||||||| || || |||| |||| | || |
|
|
| T |
12099361 |
tgttgggctcgacgagtttaacgcgagtgtaaattaaaattccaaaatccaaaagagatatgatcttgcagctcaccgatagcgataaaaatgaaaagca |
12099262 |
T |
|
| Q |
123 |
atatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
222 |
Q |
| |
|
|||||| ||||| ||||||||||||| || |||||||||| |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
12099261 |
atattttacgtgaaaaaccctctaatgacgaaggaaaaaccaagggacaaactccgaaaaaatttcaactatattaaagaatattacaatattctctcca |
12099162 |
T |
|
| Q |
223 |
ctctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
322 |
Q |
| |
|
|||||| ||||| ||||||| ||||||| ||||||| ||| |||||| |||| |||||| ||||| |||||| |||||||||||| |
|
|
| T |
12099161 |
ctctct----tacacgcacaagagacacaatattgtgtttctagtgagactcactcctattcaaatgatattattttataacacctaaaagttatagaga |
12099066 |
T |
|
| Q |
323 |
tgatac |
328 |
Q |
| |
|
|||||| |
|
|
| T |
12099065 |
tgatac |
12099060 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 171 - 383
Target Start/End: Complemental strand, 12082227 - 12082021
Alignment:
| Q |
171 |
aaactccgaaaaatattccactatattaaagaatattacaatattctctccactctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgag |
270 |
Q |
| |
|
||||||| ||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||| |||| |
|
|
| T |
12082227 |
aaactccaaaaaatattccactatattaa-gaatattacaatattttctccactctcttacacggaaa----agagatacaatatagtgtttctaatgag |
12082133 |
T |
|
| Q |
271 |
acctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtatttttcccacactctctggatttactcaac |
370 |
Q |
| |
|
|| || |||||| |||| |||||| ||||||| |||||||||||||||||| ||||| ||||| | |||||||||| | | ||||||||||| |||| |
|
|
| T |
12082132 |
actcgctcctattcaaatgttattattttatagcgcctagaagttatagagataatacctacccgatatatttttccc-ctttttctggatttacccaac |
12082034 |
T |
|
| Q |
371 |
actctatttttct |
383 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
12082033 |
actctaattttct |
12082021 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 24 - 106
Target Start/End: Complemental strand, 12084751 - 12084669
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagc |
106 |
Q |
| |
|
|||||||||| ||||||||||| | || ||||||||||||| |||||||||| ||| ||||||||||| |||||| ||||||| |
|
|
| T |
12084751 |
tgttgggctcaacgagcttaacacgagggtaaattaaaatttcaaaatccaatagacattggatcttgtagcgcaacggtagc |
12084669 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 116 - 228
Target Start/End: Original strand, 2757307 - 2757418
Alignment:
| Q |
116 |
aacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatatt |
215 |
Q |
| |
|
||||||||||||||| || ||| |||| |||| || | |||||||||| | |||||| | ||||| |||||||||||||| || |||||| || |||| |
|
|
| T |
2757307 |
aacaccaatatttaatatgaaaacccctttaatgcttaaggaaaaaccatgagacaaattttgaaaa-tattccactatatttaaaaatattgcactatt |
2757405 |
T |
|
| Q |
216 |
ctctccactctct |
228 |
Q |
| |
|
||||||||||||| |
|
|
| T |
2757406 |
ctctccactctct |
2757418 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 22 - 84
Target Start/End: Original strand, 2757211 - 2757273
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattg |
84 |
Q |
| |
|
||||||| | || ||||||||| ||||||||||||||||||||||||| ||||||| |||| |
|
|
| T |
2757211 |
cttgttgtgttcaacgagcttattacaagtgtaaattaaaattccaaaattcaaaagaaattg |
2757273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 220; Significance: 1e-121; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 24 - 373
Target Start/End: Original strand, 29106878 - 29107224
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn-tgaacacca |
122 |
Q |
| |
|
||||||| |||| |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
29106878 |
tgttgggatcgaggagcttaatgcaagtgtaaattaaaattccaaaatccaaaaaagattggatcttgcagcgcagcggtagcgttaaaaatgaacacca |
29106977 |
T |
|
| Q |
123 |
atatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
222 |
Q |
| |
|
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29106978 |
atatttaacgtggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcca |
29107077 |
T |
|
| Q |
223 |
ctctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagaga |
322 |
Q |
| |
|
|||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||| |
|
|
| T |
29107078 |
ctctct----tacacacacaagagatacaa-atagtgtttcccgtgagacctacttctattctaatgctattattttttagcacctagaagttataaaga |
29107172 |
T |
|
| Q |
323 |
tgata-cccacccggtgtatttttcccacactctctggatttactcaacact |
373 |
Q |
| |
|
||||| ||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29107173 |
tgataccccacccaatgtatttttcccacactctctggatttactcaacact |
29107224 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 23 - 381
Target Start/End: Original strand, 42910992 - 42911346
Alignment:
| Q |
23 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn-tgaacacc |
121 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||| | | |||||||| |
|
|
| T |
42910992 |
ttgttgggctcgacgagcttaacgcaagtggaaattaaaattttaaaatccaaaagagattagatcttgcagcgcagcggcaacgataaaaatgaacacc |
42911091 |
T |
|
| Q |
122 |
aatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctcc |
221 |
Q |
| |
|
|||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
42911092 |
aatatttaacatggaaaaccctctaataccgagggaaaaaccacgggacaaactccgaaaa-tattccactatatttaagaatattacaatattctctcc |
42911190 |
T |
|
| Q |
222 |
actctctnnnnnnnnnnnnnnagagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagag |
321 |
Q |
| |
|
||||||| | ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |
|
|
| T |
42911191 |
actctctcacacacaca----aaagatacaatatagtgtttcccttgagacctacttctattctaatgctattattttatagcaccaagaagttatagag |
42911286 |
T |
|
| Q |
322 |
atgatacccacccggtgtatttttcccacactctctggatttactcaacactctattttt |
381 |
Q |
| |
|
||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
42911287 |
atgatacccacccagtgtattttttccacactctctggatttactcaacactctattttt |
42911346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 22 - 104
Target Start/End: Original strand, 38994697 - 38994779
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggta |
104 |
Q |
| |
|
||||||||||| ||||| ||||| || |||||||||||||||||||||| ||||| | |||||||||||||| ||||||||| |
|
|
| T |
38994697 |
cttgttgggcttgacgatcttaatgctagtgtaaattaaaattccaaaacccaaacaaaattggatcttgcagtgcagcggta |
38994779 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 115 - 205
Target Start/End: Original strand, 38997230 - 38997320
Alignment:
| Q |
115 |
gaacaccaatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaata |
205 |
Q |
| |
|
||||| |||||||| |||| ||||||||||||||| || ||||||| |||||||||||||| ||||||| |||| |||||||||||||| |
|
|
| T |
38997230 |
gaacagcaatattttacgtcgaaaaccctctaatatcgaacgaaaaactacgggacaaactccaaaaaataatccattatattaaagaata |
38997320 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 79
Target Start/End: Original strand, 38997136 - 38997193
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaaga |
79 |
Q |
| |
|
||||||||| |||| | |||||| || |||||||||||||||||| ||||||||||| |
|
|
| T |
38997136 |
cttgttgggttcgaagggcttaatgcgggtgtaaattaaaattccagaatccaaaaga |
38997193 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 183; Significance: 7e-99; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 23 - 389
Target Start/End: Complemental strand, 8539549 - 8539183
Alignment:
| Q |
23 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagcnnnnnnn--tgaacac |
120 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
8539549 |
ttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaattctaaaagagattggatcttgcagcgcagcggtaacaataaaaaatgaacat |
8539450 |
T |
|
| Q |
121 |
caatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaatattacaatattctctc |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||||| |||| |
|
|
| T |
8539449 |
caatatttaacgtggaaaaccctctaataccgagggaaaaatcacgggacaaactccgaaagatattccactatatttaagaatattacaatattatctc |
8539350 |
T |
|
| Q |
221 |
cactctctnnnnnnnnnnnnnnagagatacaa---tatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttat |
317 |
Q |
| |
|
|||||||| |||||||||| |||||||||| |||||||||| ||| |||||| | ||||||||| ||| |||||||| ||||||| |
|
|
| T |
8539349 |
cactctct----tacacacacaagagatacaatattatagtgttt-ccgtgagacccactcctattcgattgctattattttacagcacctaaaagttat |
8539255 |
T |
|
| Q |
318 |
agagatgatacccacccggtgtatttttcccacactctctggatttactcaacactctatttttcttctcac |
389 |
Q |
| |
|
|||||||||||||| ||| |||||||||||||||||||||| ||||||| |||||| |||||||| |||||| |
|
|
| T |
8539254 |
agagatgatacccatccgatgtatttttcccacactctctgaatttactgaacactatatttttcctctcac |
8539183 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 99; Significance: 9e-49; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 244 - 382
Target Start/End: Complemental strand, 51302306 - 51302168
Alignment:
| Q |
244 |
gagatacaatatagtgtttcccgtgagacctacttctattctaatgctattatattatagcacctagaagttatagagatgatacccacccggtgtattt |
343 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||| |||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
51302306 |
gagatacaatatagtgtttcccgtgagacccactcctattcgaatgcaattgttttatagcacctagaagttatagagatgattcccacccggtgtattt |
51302207 |
T |
|
| Q |
344 |
ttcccacactctctggatttactcaacactctatttttc |
382 |
Q |
| |
|
| ||||||||||||||||||||||| |||||||||||| |
|
|
| T |
51302206 |
tatccacactctctggatttactcaatactctatttttc |
51302168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 22 - 106
Target Start/End: Complemental strand, 51303021 - 51302937
Alignment:
| Q |
22 |
cttgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattggatcttgcagcgcagcggtagc |
106 |
Q |
| |
|
||||||||| ||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
51303021 |
cttgttgggatcgacgagcttaatgcaagtgtaaattaaaatttcaaaatccaaaacagattggatcttgcagcgcagcggtagc |
51302937 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 114 - 150
Target Start/End: Complemental strand, 51302344 - 51302308
Alignment:
| Q |
114 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
150 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |
|
|
| T |
51302344 |
tgaacaccaatatttaacgtggaaaaccctctaatac |
51302308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 69; Significance: 7e-31; HSPs: 2)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 24 - 205
Target Start/End: Original strand, 2100199 - 2100379
Alignment:
| Q |
24 |
tgttgggctcgacgagcttaacgcaagtgtaaattaaaattccaaaatccaaaagagattgga-tcttgcagcgcagcggtagcnnnnnnnt-gaacacc |
121 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||| || |||||||| || | ||||||| || || || | ||||| | |
|
|
| T |
2100199 |
tgttgggctcgacgagcttaacacaagtgtaaattaaaattccaaaattcataagagatttgaattttgcagcacaacgataatgataaaattgaacatc |
2100298 |
T |
|
| Q |
122 |
aatatttaacgtggaaaaccctctaatactgagggaaaaaccacgggacaaactccgaaaaatattccactatattaaagaata |
205 |
Q |
| |
|
||||||||| |||||||||||| ||||| |||| ||||||| ||| |||||||||||||||||||||||||||||||||||| |
|
|
| T |
2100299 |
aatatttaaggtggaaaaccctttaataatgagcgaaaaac---ggggcaaactccgaaaaatattccactatattaaagaata |
2100379 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 198 - 228
Target Start/End: Original strand, 2100723 - 2100753
Alignment:
| Q |
198 |
aaagaatattacaatattctctccactctct |
228 |
Q |
| |
|
||||||||||||||||||||||||||||||| |
|
|
| T |
2100723 |
aaagaatattacaatattctctccactctct |
2100753 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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