View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13985_high_16 (Length: 385)
Name: NF13985_high_16
Description: NF13985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13985_high_16 |
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Alignment Details
Target: chr7 (Bit Score: 320; Significance: 1e-180; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 20 - 375
Target Start/End: Original strand, 31881278 - 31881633
Alignment:
| Q |
20 |
ccgaggccaatatgagaggttcctgaaaatggacaaatacaaagtctggcccgaaaaagtctttgacattcaccctgatggccatcaccatgatctcctt |
119 |
Q |
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| T |
31881278 |
ccgaggccaatatgagaggttcctgaaaatggacaaatacaaagtctggcccgaaaaagtctttgacattcaccctgatggccatcaccatgatctcctt |
31881377 |
T |
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| Q |
120 |
cggatgtttaggaaccgtaagtggaccacactcctaagcccttacacgaagatcaacattggcctcttaaaagagttttatgccaatgttgtaaccgatg |
219 |
Q |
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| T |
31881378 |
cagatgtttaggaaccgtaggtggaccacactcttaagcccttacacgaagatcaacattggcctcttaaaggagttttattccaatgttgtaaccgatg |
31881477 |
T |
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| Q |
220 |
cctcccacactaccatggccgactccttttctttcaccaccaccgtgaggggaaagaccatccgcttcaatagggatgcgatcaatgacttccttggtaa |
319 |
Q |
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| T |
31881478 |
cctcccacactaccatggccgactccttttctttcaccaccaccgtgaggggaaagaccatccgcttcgatagggatgcgatcaatgacttccttggtaa |
31881577 |
T |
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| Q |
320 |
accttttacccttcctgagtcggaggaaccaactgtacccactctctatgcctatg |
375 |
Q |
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| T |
31881578 |
accttttaccctacctaagtcggaggaaccaactgtacccactctctgtgcctatg |
31881633 |
T |
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