View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13985_high_8 (Length: 465)

Name: NF13985_high_8
Description: NF13985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13985_high_8
NF13985_high_8
[»] chr1 (66 HSPs)
chr1 (77-382)||(5804694-5805007)
chr1 (77-191)||(16659078-16659194)
chr1 (97-197)||(38657698-38657798)
chr1 (77-198)||(16659839-16659961)
chr1 (77-198)||(967892-968014)
chr1 (79-134)||(5805977-5806033)
chr1 (77-134)||(7965509-7965567)
chr1 (77-134)||(42616696-42616754)
chr1 (78-198)||(31697117-31697238)
chr1 (67-134)||(35122253-35122321)
chr1 (77-134)||(1040138-1040196)
chr1 (77-134)||(1047044-1047102)
chr1 (77-134)||(7334927-7334985)
chr1 (77-134)||(7964114-7964172)
chr1 (77-134)||(24326583-24326641)
chr1 (77-134)||(24332313-24332371)
chr1 (77-134)||(28050014-28050072)
chr1 (77-134)||(34022470-34022528)
chr1 (78-134)||(7121819-7121876)
chr1 (77-198)||(29021583-29021705)
chr1 (77-134)||(32322210-32322267)
chr1 (67-134)||(6714193-6714261)
chr1 (79-134)||(31698283-31698339)
chr1 (77-132)||(35814397-35814453)
chr1 (77-132)||(39851542-39851598)
chr1 (77-134)||(1039698-1039756)
chr1 (77-134)||(1046604-1046662)
chr1 (77-134)||(3798325-3798383)
chr1 (77-134)||(3798709-3798767)
chr1 (77-134)||(5598519-5598577)
chr1 (77-134)||(5599034-5599092)
chr1 (77-134)||(6328329-6328387)
chr1 (77-134)||(7049088-7049146)
chr1 (77-134)||(7121335-7121393)
chr1 (77-134)||(12501765-12501823)
chr1 (77-134)||(14244559-14244617)
chr1 (77-130)||(20257969-20258023)
chr1 (77-134)||(24231484-24231542)
chr1 (77-134)||(24370116-24370174)
chr1 (77-134)||(24381160-24381218)
chr1 (77-134)||(24508211-24508269)
chr1 (77-134)||(29022548-29022606)
chr1 (77-134)||(31488026-31488084)
chr1 (77-134)||(31488411-31488469)
chr1 (77-134)||(32193994-32194052)
chr1 (77-134)||(32319865-32319923)
chr1 (77-134)||(36967251-36967309)
chr1 (77-134)||(37483055-37483113)
chr1 (77-134)||(37483542-37483600)
chr1 (77-134)||(37708193-37708251)
chr1 (77-134)||(38980053-38980111)
chr1 (77-134)||(39851175-39851233)
chr1 (77-134)||(42617192-42617250)
chr1 (77-134)||(44114517-44114575)
chr1 (77-134)||(45678713-45678771)
chr1 (77-134)||(46448218-46448276)
chr1 (77-134)||(50138496-50138554)
chr1 (77-134)||(50227913-50227971)
chr1 (96-134)||(51241745-51241783)
chr1 (279-340)||(6049292-6049353)
chr1 (77-125)||(10719641-10719690)
chr1 (68-132)||(38657859-38657924)
chr1 (77-132)||(6714704-6714760)
chr1 (77-128)||(10719357-10719409)
chr1 (77-132)||(35368857-35368913)
chr1 (246-306)||(40811404-40811464)
[»] chr8 (51 HSPs)
chr8 (108-382)||(36179489-36179763)
chr8 (79-197)||(16905258-16905377)
chr8 (68-198)||(22594310-22594441)
chr8 (105-193)||(22595085-22595173)
chr8 (77-134)||(2087759-2087817)
chr8 (77-134)||(9319340-9319398)
chr8 (77-134)||(43086884-43086942)
chr8 (77-134)||(9807279-9807337)
chr8 (77-134)||(11760914-11760972)
chr8 (65-134)||(25825301-25825371)
chr8 (96-134)||(44553149-44553187)
chr8 (74-134)||(3443029-3443090)
chr8 (78-134)||(9739278-9739335)
chr8 (78-134)||(15271125-15271182)
chr8 (78-134)||(23017187-23017244)
chr8 (77-132)||(16906465-16906521)
chr8 (79-134)||(30864166-30864222)
chr8 (77-134)||(761394-761452)
chr8 (77-134)||(2221595-2221653)
chr8 (77-134)||(3292018-3292076)
chr8 (77-134)||(7116473-7116531)
chr8 (147-197)||(9317095-9317145)
chr8 (77-134)||(9739784-9739842)
chr8 (77-134)||(11713201-11713259)
chr8 (77-134)||(14897395-14897453)
chr8 (77-134)||(22013463-22013521)
chr8 (77-134)||(22013951-22014009)
chr8 (77-134)||(22323940-22323998)
chr8 (77-134)||(26060107-26060165)
chr8 (77-134)||(26060631-26060689)
chr8 (77-134)||(27786484-27786542)
chr8 (77-134)||(31445670-31445728)
chr8 (77-134)||(33098969-33099027)
chr8 (77-134)||(41154618-41154676)
chr8 (77-134)||(41155013-41155071)
chr8 (77-134)||(41658401-41658459)
chr8 (77-134)||(42193780-42193838)
chr8 (77-134)||(45123221-45123279)
chr8 (77-134)||(45123614-45123672)
chr8 (78-134)||(7775001-7775058)
chr8 (78-164)||(15271562-15271648)
chr8 (95-132)||(21014952-21014989)
chr8 (78-134)||(43086390-43086447)
chr8 (79-134)||(2221965-2222021)
chr8 (78-133)||(9317027-9317083)
chr8 (77-128)||(10134609-10134661)
chr8 (77-128)||(10134922-10134974)
chr8 (79-134)||(13089441-13089497)
chr8 (246-306)||(13366954-13367014)
chr8 (87-134)||(40448734-40448782)
chr8 (77-128)||(40832137-40832189)
[»] chr2 (39 HSPs)
chr2 (77-382)||(11129883-11130209)
chr2 (79-196)||(16329748-16329866)
chr2 (77-134)||(3203130-3203188)
chr2 (77-134)||(5381537-5381595)
chr2 (77-134)||(9401121-9401179)
chr2 (77-134)||(16330838-16330896)
chr2 (77-134)||(16712438-16712496)
chr2 (77-134)||(16712846-16712904)
chr2 (77-134)||(40537000-40537058)
chr2 (78-134)||(12966229-12966286)
chr2 (156-197)||(36889683-36889724)
chr2 (80-134)||(11131183-11131238)
chr2 (79-134)||(14287835-14287890)
chr2 (77-134)||(2822305-2822363)
chr2 (77-134)||(2970816-2970874)
chr2 (77-134)||(4602816-4602874)
chr2 (77-134)||(5382017-5382075)
chr2 (96-134)||(8885679-8885717)
chr2 (77-134)||(10708150-10708208)
chr2 (77-134)||(11713996-11714054)
chr2 (96-134)||(12602596-12602634)
chr2 (77-134)||(13479431-13479489)
chr2 (77-134)||(18469594-18469652)
chr2 (77-134)||(32194828-32194886)
chr2 (77-134)||(38806844-38806902)
chr2 (77-134)||(38807184-38807242)
chr2 (77-134)||(39107760-39107818)
chr2 (77-134)||(18950738-18950795)
chr2 (146-187)||(36888409-36888450)
chr2 (75-134)||(4844047-4844107)
chr2 (77-132)||(12965789-12965845)
chr2 (77-132)||(14288320-14288376)
chr2 (246-306)||(14509361-14509421)
chr2 (79-134)||(17978098-17978154)
chr2 (87-134)||(24181504-24181552)
chr2 (77-128)||(25945827-25945879)
chr2 (77-132)||(26424825-26424881)
chr2 (79-134)||(32194445-32194501)
chr2 (79-126)||(36065530-36065578)
[»] chr3 (29 HSPs)
chr3 (148-373)||(14858886-14859118)
chr3 (77-134)||(52254304-52254362)
chr3 (144-197)||(53227192-53227245)
chr3 (80-134)||(52255530-52255585)
chr3 (77-128)||(26246869-26246921)
chr3 (77-132)||(52857286-52857342)
chr3 (77-134)||(40503240-40503298)
chr3 (79-128)||(43465126-43465176)
chr3 (77-134)||(48085238-48085296)
chr3 (77-134)||(53228213-53228271)
chr3 (77-132)||(4953125-4953181)
chr3 (77-128)||(13301961-13302013)
chr3 (77-128)||(13312617-13312669)
chr3 (77-132)||(24242449-24242505)
chr3 (77-128)||(43464813-43464865)
chr3 (77-134)||(6098980-6099038)
chr3 (77-134)||(12739879-12739937)
chr3 (77-134)||(12739965-12740023)
chr3 (77-134)||(13355726-13355784)
chr3 (77-134)||(24242996-24243054)
chr3 (79-128)||(24244468-24244518)
chr3 (79-128)||(26247184-26247234)
chr3 (77-134)||(44475652-44475710)
chr3 (77-134)||(44712064-44712122)
chr3 (77-134)||(45940216-45940274)
chr3 (77-134)||(48082872-48082930)
chr3 (79-134)||(8101042-8101098)
chr3 (77-132)||(13355176-13355232)
chr3 (77-132)||(28919090-28919146)
[»] chr4 (47 HSPs)
chr4 (145-340)||(4890897-4891096)
chr4 (89-197)||(53594997-53595106)
chr4 (77-194)||(2735541-2735658)
chr4 (79-192)||(43629182-43629296)
chr4 (81-198)||(50282867-50282983)
chr4 (78-134)||(53596148-53596205)
chr4 (79-134)||(2734800-2734856)
chr4 (77-128)||(35017003-35017054)
chr4 (77-134)||(44182563-44182621)
chr4 (96-198)||(26281185-26281287)
chr4 (78-134)||(46308036-46308093)
chr4 (75-134)||(14947686-14947746)
chr4 (75-134)||(25619091-25619151)
chr4 (279-339)||(49896452-49896512)
chr4 (87-134)||(1370103-1370150)
chr4 (77-131)||(44795753-44795808)
chr4 (77-134)||(9091425-9091483)
chr4 (77-134)||(11815861-11815919)
chr4 (77-134)||(22309465-22309523)
chr4 (77-134)||(37208316-37208374)
chr4 (77-134)||(44303516-44303574)
chr4 (77-134)||(45046907-45046965)
chr4 (63-134)||(22813345-22813417)
chr4 (77-127)||(14251197-14251248)
chr4 (64-134)||(40256086-40256157)
chr4 (77-134)||(1098054-1098112)
chr4 (77-134)||(1098395-1098453)
chr4 (77-134)||(17475398-17475456)
chr4 (77-134)||(17475882-17475940)
chr4 (77-134)||(20614116-20614174)
chr4 (77-134)||(20614615-20614673)
chr4 (77-134)||(25618437-25618495)
chr4 (96-134)||(26280095-26280133)
chr4 (77-134)||(31487979-31488037)
chr4 (77-134)||(34237946-34238004)
chr4 (77-134)||(41610128-41610186)
chr4 (77-134)||(42369508-42369566)
chr4 (77-134)||(44304361-44304419)
chr4 (77-134)||(56271215-56271273)
chr4 (73-134)||(9087359-9087420)
chr4 (78-134)||(34543052-34543109)
chr4 (77-132)||(51399526-51399583)
chr4 (79-134)||(34237484-34237540)
chr4 (87-134)||(44183805-44183853)
chr4 (77-132)||(44796177-44796233)
chr4 (79-134)||(46058698-46058754)
chr4 (79-134)||(48453636-48453692)
[»] chr6 (21 HSPs)
chr6 (77-197)||(28866356-28866477)
chr6 (144-197)||(12586728-12586781)
chr6 (77-134)||(13703382-13703440)
chr6 (146-200)||(20489374-20489428)
chr6 (77-134)||(715048-715105)
chr6 (79-134)||(10914563-10914619)
chr6 (89-134)||(901431-901477)
chr6 (77-134)||(902752-902810)
chr6 (77-134)||(9424907-9424965)
chr6 (77-134)||(17383736-17383794)
chr6 (77-134)||(21271487-21271545)
chr6 (77-134)||(21272118-21272176)
chr6 (77-134)||(22498766-22498824)
chr6 (77-134)||(26392844-26392902)
chr6 (77-134)||(28865600-28865658)
chr6 (77-134)||(31739914-31739972)
chr6 (77-128)||(959322-959374)
chr6 (77-132)||(12586853-12586909)
chr6 (79-134)||(14527516-14527572)
chr6 (77-132)||(17383934-17383990)
chr6 (145-197)||(20488330-20488382)
[»] chr5 (44 HSPs)
chr5 (77-191)||(28904631-28904747)
chr5 (77-191)||(28941026-28941142)
chr5 (77-192)||(30644915-30645031)
chr5 (77-198)||(28905392-28905514)
chr5 (77-198)||(28941787-28941909)
chr5 (105-197)||(14348151-14348242)
chr5 (77-194)||(39547778-39547896)
chr5 (77-198)||(30645662-30645784)
chr5 (77-134)||(14347402-14347460)
chr5 (77-134)||(19797665-19797723)
chr5 (77-134)||(39548599-39548657)
chr5 (77-161)||(1095496-1095581)
chr5 (60-134)||(27098524-27098599)
chr5 (77-134)||(3721586-3721644)
chr5 (77-134)||(13668508-13668566)
chr5 (77-134)||(19798719-19798777)
chr5 (77-134)||(39023956-39024014)
chr5 (77-198)||(37192407-37192529)
chr5 (79-134)||(435874-435930)
chr5 (77-161)||(5187093-5187178)
chr5 (77-128)||(17115633-17115685)
chr5 (77-132)||(30645108-30645164)
chr5 (77-134)||(435555-435613)
chr5 (77-134)||(1031303-1031361)
chr5 (77-126)||(4076956-4077006)
chr5 (77-134)||(6157496-6157554)
chr5 (77-134)||(7265613-7265671)
chr5 (77-134)||(11079629-11079687)
chr5 (77-134)||(16669507-16669565)
chr5 (77-134)||(16670027-16670085)
chr5 (77-134)||(17420630-17420688)
chr5 (96-134)||(24042678-24042716)
chr5 (77-134)||(24100699-24100757)
chr5 (77-134)||(27851042-27851100)
chr5 (77-134)||(29962180-29962238)
chr5 (77-134)||(30012560-30012618)
chr5 (77-134)||(37191594-37191652)
chr5 (77-134)||(38312326-38312384)
chr5 (77-134)||(42767692-42767750)
chr5 (77-129)||(14348023-14348076)
chr5 (81-132)||(14662368-14662420)
chr5 (79-126)||(20243369-20243417)
chr5 (83-134)||(27121629-27121681)
chr5 (77-132)||(35463563-35463619)
[»] scaffold0042 (1 HSPs)
scaffold0042 (146-199)||(91432-91485)
[»] chr7 (51 HSPs)
chr7 (77-134)||(28460984-28461042)
chr7 (77-134)||(48094841-48094899)
chr7 (79-134)||(8685892-8685948)
chr7 (77-188)||(17236065-17236177)
chr7 (77-134)||(21433047-21433105)
chr7 (77-126)||(30283919-30283969)
chr7 (77-134)||(39143147-39143205)
chr7 (79-132)||(41911279-41911332)
chr7 (77-134)||(42753915-42753972)
chr7 (78-134)||(45995269-45995326)
chr7 (75-126)||(472597-472649)
chr7 (79-134)||(28460566-28460622)
chr7 (79-134)||(44333002-44333058)
chr7 (79-134)||(29933709-29933764)
chr7 (78-132)||(44495705-44495760)
chr7 (77-134)||(713061-713119)
chr7 (77-134)||(3217753-3217811)
chr7 (77-134)||(5905129-5905187)
chr7 (77-134)||(7776458-7776516)
chr7 (77-134)||(7776956-7777014)
chr7 (77-134)||(13965041-13965099)
chr7 (77-134)||(14682993-14683051)
chr7 (77-134)||(18297155-18297213)
chr7 (77-134)||(18458277-18458335)
chr7 (77-134)||(20493746-20493804)
chr7 (77-134)||(20494227-20494285)
chr7 (77-134)||(24733630-24733688)
chr7 (77-134)||(27284243-27284301)
chr7 (77-134)||(27284608-27284666)
chr7 (77-134)||(31852081-31852139)
chr7 (77-134)||(32072299-32072357)
chr7 (77-134)||(34620217-34620275)
chr7 (77-134)||(34621784-34621842)
chr7 (77-134)||(36720992-36721050)
chr7 (77-134)||(36951575-36951633)
chr7 (77-134)||(37374456-37374514)
chr7 (77-134)||(38444033-38444091)
chr7 (77-134)||(39143510-39143568)
chr7 (77-134)||(40852159-40852217)
chr7 (77-134)||(41691926-41691984)
chr7 (77-134)||(41911818-41911876)
chr7 (77-134)||(44496077-44496135)
chr7 (77-134)||(45456735-45456793)
chr7 (77-134)||(47987328-47987386)
chr7 (74-134)||(8090819-8090880)
chr7 (77-132)||(5101482-5101538)
chr7 (147-187)||(8685840-8685880)
chr7 (79-126)||(16962847-16962895)
chr7 (79-134)||(18458774-18458830)
chr7 (79-126)||(30284232-30284280)
chr7 (77-132)||(45457105-45457161)
[»] scaffold0009 (1 HSPs)
scaffold0009 (79-134)||(218162-218218)
[»] scaffold0220 (2 HSPs)
scaffold0220 (77-128)||(25964-26016)
scaffold0220 (77-128)||(26277-26329)
[»] scaffold0259 (1 HSPs)
scaffold0259 (95-134)||(12062-12101)
[»] scaffold0150 (1 HSPs)
scaffold0150 (95-134)||(38902-38941)
[»] scaffold0202 (1 HSPs)
scaffold0202 (144-198)||(22140-22194)
[»] scaffold0054 (2 HSPs)
scaffold0054 (77-134)||(57023-57081)
scaffold0054 (77-134)||(57557-57615)
[»] scaffold0005 (1 HSPs)
scaffold0005 (77-134)||(1476-1534)
[»] scaffold0002 (1 HSPs)
scaffold0002 (77-134)||(283173-283231)
[»] scaffold0018 (1 HSPs)
scaffold0018 (79-134)||(133576-133632)
[»] scaffold0006 (1 HSPs)
scaffold0006 (79-134)||(83016-83072)


Alignment Details
Target: chr1 (Bit Score: 215; Significance: 1e-118; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 77 - 382
Target Start/End: Original strand, 5804694 - 5805007
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||         ||||||| ||||||||||||||||||||||||    
T  5804694 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttcagtactttaatttaatttttgtta 5804793  T
Q  176 cattttttggtcccttccgttaaggtcgtgaaaaaa-------ggggttaaccccaaatgtctcatgtgggctcacattataggtggtccactaaagacc 268  Q
    |||||||||||||||||||||| ||| |||||||||       |||||||||||||||||||||| ||| |||||||||||||||||||||| |||||||    
T  5804794 cattttttggtcccttccgttagggttgtgaaaaaactgttaaggggttaaccccaaatgtctcacgtgagctcacattataggtggtccaccaaagacc 5804893  T
Q  269 ttagtaatacttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtctacgggatctaactatataccaccaacactt 368  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5804894 ttagtaatacttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtctacgggatctaactatataccaccaacactt 5804993  T
Q  369 aatttgttttttag 382  Q
    ||||||||||||||    
T  5804994 aatttgttttttag 5805007  T

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Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 16659078 - 16659194
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnnta-attgtttgagtactttaatttaatttttgtt 174  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||        | ||| ||||||||||||||||||||||| |||    
T  16659078 gcttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaactaaaaaaaaagattatttgagtactttaatttaattttcgtt 16659177  T
Q  175 acattttttggtccctt 191  Q
    |||||||||||||||||    
T  16659178 acattttttggtccctt 16659194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 97 - 197
Target Start/End: Original strand, 38657698 - 38657798
Alignment:
Q  97 cttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacattttttggtcccttccgtt 196  Q
    |||| |||||||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||  ||| ||||||||||||||||||||    
T  38657698 cttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtattttaatttaattttcattatattttttggtcccttccgtt 38657797  T
Q  197 a 197  Q
    |    
T  38657798 a 38657798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 16659961 - 16659839
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||        ||||||||||||||||||  || || | |||||    
T  16659961 gcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttatctttatctctgtta 16659862  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | ||||||||||||| |||||    
T  16659861 cctgttttggtcccttctgttaa 16659839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 967892 - 968014
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||||||  ||||||| ||| ||||||||||||||||||||||||||||||||          ||||||||||||||||| ||| || | |||||    
T  967892 gcttaaatgttcaattggtcccttaagtatttatttggtatcgttttggtcccttaacaaaaataaagattgtttgagtactttatttttatctatgtta 967991  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | |||||||| ||||||||||    
T  967992 cctattttggtctcttccgttaa 968014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 5806033 - 5805977
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||||||||||||    
T  5806033 ttaaatgctcttttggtctcttaagtatttatttggtatcgttttggtcccttaact 5805977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 7965567 - 7965509
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  ||||||||||||||||||||||||||||||||    
T  7965567 gcttaaatgctcttttggtcccttaactatttatttggtatcgttttggtcccttaact 7965509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 42616696 - 42616754
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| | ||||||| |||||||||||||||||||||||||    
T  42616696 gcttaaatgctcttttggtcctttaagtatttaattggtatcgttttggtcccttaact 42616754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 78 - 198
Target Start/End: Original strand, 31697117 - 31697238
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttac 176  Q
    |||||||| ||||||||||| |||  |||||||||||||||| |||||||||||||||        |||| |||||||||||||  || || | ||||||    
T  31697117 cttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcccttaactaaaaaaaaaattatttgagtactttatctttatatctgttac 31697216  T
Q  177 attttttggtcccttccgttaa 198  Q
     | ||||||||||||| |||||    
T  31697217 ctattttggtcccttctgttaa 31697238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 35122253 - 35122321
Alignment:
Q  67 tataaacaatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| |||||||||||||||||||||||| |||  |||||| || |||||| |||||||||||||||    
T  35122253 tataaagaatgcttaaatgttcttttggtcctttaactatttaattagtatcgctttggtcccttaact 35122321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 1040196 - 1040138
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  1040196 gcttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaact 1040138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 1047102 - 1047044
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  1047102 gcttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaact 1047044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 7334985 - 7334927
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  7334985 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 7334927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 7964114 - 7964172
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||||||||||||| |||||||||||||||    
T  7964114 gcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaact 7964172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 24326583 - 24326641
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||||||||||||| |||||||||||||||    
T  24326583 gcttaaatgctcttttggtcccttaactatttatttggtatcgctttggtcccttaact 24326641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 24332371 - 24332313
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||||||||||||| |||||||||||||||    
T  24332371 gcttaaatgctcttttggtcctttaactatttatttggtatcgctttggtcccttaact 24332313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 28050072 - 28050014
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  28050072 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 28050014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 34022470 - 34022528
Alignment:
Q  77 gcttaaatgttcttttggtcct-taggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||||  ||  |||||| |||||||||||||||||||||||||    
T  34022470 gcttaaatgttcttttggtcccataactatttaattggtatcgttttggtcccttaact 34022528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 7121876 - 7121819
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  7121876 cttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 7121819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 198
Target Start/End: Original strand, 29021583 - 29021705
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||||  ||||||||| |||  |||||||||||||||| |||||||||||||||         |||||||||||||||||  || || | |||||    
T  29021583 gcttaaatgtgtttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctgtta 29021682  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | ||||||||||||| |||||    
T  29021683 cctgttttggtcccttctgttaa 29021705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 32322210 - 32322267
Alignment:
Q  77 gcttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| ||| ||||||| ||||||||| ||| |||||||||||    
T  32322210 gcttaaatgctcttttggtctttaagtatttagttggtatcgctttagtcccttaact 32322267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 6714193 - 6714261
Alignment:
Q  67 tataaacaatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| || ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  6714193 tataaaaaaggcttaaatgctcttttggtccgttaactatttaattggtatcgctttggtcccttaact 6714261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 31698339 - 31698283
Alignment:
Q  79 ttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||| |||||  |||||||||||||||| |||| ||||||||||    
T  31698339 ttaaatgttcttttggttccttaaatatttatttggtatcgctttgatcccttaact 31698283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 35814453 - 35814397
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||    
T  35814453 gcttaaatgctcttttggtcccttaagtatttacttggtatcgctttggtcccttaa 35814397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 39851598 - 39851542
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||    
T  39851598 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaa 39851542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 1039698 - 1039756
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| || | ||||||| ||| |||||||||||||||||||||    
T  1039698 gcttaaatgctcttttggtcttttaagtatttaattgatatcgttttggtcccttaact 1039756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 1046604 - 1046662
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| || | ||||||| ||| |||||||||||||||||||||    
T  1046604 gcttaaatgctcttttggtcttttaagtatttaattgatatcgttttggtcccttaact 1046662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 3798325 - 3798383
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  3798325 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 3798383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 3798767 - 3798709
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  3798767 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 3798709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 5598519 - 5598577
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  5598519 gcttaaatgctcttttggtcgcttaactatttaattggtatcgctttggtcccttaact 5598577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 5599092 - 5599034
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||||||||||| |||||||    
T  5599092 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtctcttaact 5599034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 6328387 - 6328329
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| || ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  6328387 gcttaattgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 6328329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 7049088 - 7049146
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| ||||| ||||||| ||| ||||| ||||||| |||||||    
T  7049088 gcttaaatgttcttttggtcccttaagtatttaattgatatcgctttggtctcttaact 7049146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 7121335 - 7121393
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| |||||||||||||| ||||||||||    
T  7121335 gcttaaatgctcttttggttccttaactatttaattggtatcgttttgatcccttaact 7121393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 12501823 - 12501765
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||| ||||| ||| ||||||| || ||||||||||||||||||||||    
T  12501823 gcttaaatgctctttaggtcccttaagtatttaattagtatcgttttggtcccttaact 12501765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 14244617 - 14244559
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  14244617 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 14244559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 130
Target Start/End: Original strand, 20257969 - 20258023
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccctt 130  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||    
T  20257969 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtccctt 20258023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 24231542 - 24231484
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  24231542 gcttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 24231484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 24370116 - 24370174
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  24370116 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24370174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 24381218 - 24381160
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  24381218 gcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaact 24381160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 24508211 - 24508269
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||| ||| || | |||||||||||||||||||||| ||||||||||    
T  24508211 gcttaaatgctctttttgtcatttaagtatttatttggtatcgttttgatcccttaact 24508269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 29022606 - 29022548
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||| |||||||| |||||  |||||||||||||||  |||||||||||||||    
T  29022606 gcttaaatgtgcttttggttccttaactatttatttggtatcactttggtcccttaact 29022548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 31488026 - 31488084
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  31488026 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31488084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 31488469 - 31488411
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  31488469 gcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact 31488411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 32194052 - 32193994
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||||    
T  32194052 gcttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 32193994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 32319865 - 32319923
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||| |||||||| |||| ||||||| |||||||||||||| || |||||||    
T  32319865 gcttaaatgtttttttggtctcttaagtatttaattggtatcgttttgatctcttaact 32319923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 36967309 - 36967251
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||||| |||  |||||| ||||||||| ||||| |||||||||    
T  36967309 gcttaaatgttcttttggtcctttaactatttaattggtatcgctttgggcccttaact 36967251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 37483055 - 37483113
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  37483055 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37483113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 37483600 - 37483542
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  37483600 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37483542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 37708193 - 37708251
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||||    
T  37708193 gcttaaatgctcttttggttccttaattatttaattggtatcgctttggtcccttaact 37708251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 38980111 - 38980053
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  38980111 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 38980053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 39851175 - 39851233
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||| |||||||||||||||    
T  39851175 gcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 39851233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 42617250 - 42617192
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| ||||| ||||||| ||||||||| ||| |||||||||||    
T  42617250 gcttaaatgatcttttggttccttaagtatttaattggtatcgctttagtcccttaact 42617192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 44114575 - 44114517
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  44114575 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 44114517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 45678713 - 45678771
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  45678713 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45678771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 46448218 - 46448276
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  46448218 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 46448276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 50138496 - 50138554
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  50138496 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 50138554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 50227971 - 50227913
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  50227971 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 50227913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 51241745 - 51241783
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  51241745 ccttaagtatttatttggtatcgctttggtcccttaact 51241783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 279 - 340
Target Start/End: Complemental strand, 6049353 - 6049292
Alignment:
Q  279 ttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtctac 340  Q
    ||||||| | ||||| ||||||||||||||| ||| |  ||||||||||||| |||||||||    
T  6049353 ttttaatttaaaccgattgatattttttattaaaagaggaccattagatcatgcatgtctac 6049292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 125
Target Start/End: Complemental strand, 10719690 - 10719641
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggt 125  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| ||||||    
T  10719690 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggt 10719641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 68 - 132
Target Start/End: Complemental strand, 38657924 - 38657859
Alignment:
Q  68 ataaacaatgcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||| || ||||||||| |||||| |||||| | ||||||||||||||||  |||||||||||||    
T  38657924 ataaaaaaagcttaaatgctcttttcgtcctttaagtatttatttggtatcactttggtcccttaa 38657859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 6714760 - 6714704
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||    
T  6714760 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 6714704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 10719357 - 10719409
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||| ||||| |||||||||| |||||| |||||||||    
T  10719357 gcttaaatgctcttttggtcccttaagtatttatttagtatcgctttggtccc 10719409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 35368857 - 35368913
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||    
T  35368857 gcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaa 35368913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 40811404 - 40811464
Alignment:
Q  246 ttataggtggtccactaaagaccttagtaatacttttaatctcaaccgtttgatatttttt 306  Q
    ||||||||||||||| | |||||||| |||  |||||| | | ||||||||||||||||||    
T  40811404 ttataggtggtccaccatagaccttattaaatcttttatttttaaccgtttgatatttttt 40811464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 140; Significance: 4e-73; HSPs: 51)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 108 - 382
Target Start/End: Original strand, 36179489 - 36179763
Alignment:
Q  108 atttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacattttttggtcccttccgttaaggtcgtgaa 207  Q
    ||||||||||| ||||||| |||||||       | ||||||| | ||| |||||||||||||||||||| ||||||||||||      | ||| |||||    
T  36179489 atttggtatcgctttggtctcttaactaaacaaatgattgtttcaatacattaatttaatttttgttacactttttggtccct------agggttgtgaa 36179582  T
Q  208 aaaa-------ggggttaaccccaaatgtctcatgtgggctcacattataggtggtccactaaagaccttagtaatacttttaatctcaaccgtttgata 300  Q
    ||||       || ||||||||||||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||    
T  36179583 aaaactgttaaggagttaaccccaaatgtctcaggtgggctcacattataggtggtccaccaaagactttagtaatacttttaatctcaaccgtttgata 36179682  T
Q  301 ttttttattgaaaaacaaccattagatcatacatgtctacgggatctaactatataccaccaacacttaatttgttttttag 382  Q
    ||||||| |||||||||||||||||||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||    
T  36179683 tttttta-tgaaaaacaaccattagatcgtacatgtctacgagatctaactatatacaaccaacacttaatttgttttttag 36179763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 79 - 197
Target Start/End: Original strand, 16905258 - 16905377
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttaca 177  Q
    ||||||| ||||||||||| ||| ||||||||||||||||| ||||||||||| |||         |||||||||||||||||||||||||||  |||||    
T  16905258 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttgactaaaaaaaagattgtttgagtactttaatttaattttcattaca 16905357  T
Q  178 ttttttggtcccttccgtta 197  Q
    ||||||||||||||||||||    
T  16905358 ttttttggtcccttccgtta 16905377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 22594310 - 22594441
Alignment:
Q  68 ataaacaatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaa 166  Q
    ||||| || ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||         |||||||||||||||||  || |    
T  22594310 ataaaaaaggcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatcttta 22594409  T
Q  167 tttttgttacattttttggtcccttccgttaa 198  Q
    | | |||||| | ||||||||||||| |||||    
T  22594410 tctctgttacctgttttggtcccttctgttaa 22594441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 105 - 193
Target Start/End: Complemental strand, 22595173 - 22595085
Alignment:
Q  105 tttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacattttttggtcccttcc 193  Q
    |||||||| ||||| |||||||||||||||         ||||||||||||||||||||||||||| |||||||||||| |||||||||    
T  22595173 tttatttgatatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgttacatttttttgtcccttcc 22595085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 2087759 - 2087817
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||| ||| |||| ||||||| |||||||||||||||||||||||||    
T  2087759 gcttaaatgttcttttagtctcttaagtatttaattggtatcgttttggtcccttaact 2087817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 9319398 - 9319340
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||  ||||||| ||| |||||||||||||||||||||||||||||||||    
T  9319398 gcttaaatgttcaattggtcccttaagtatttatttggtatcgttttggtcccttaact 9319340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 43086942 - 43086884
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  43086942 gcttaaatgttcttttggtcccttaactatttaattggtatcgttttggtcccttaact 43086884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 9807337 - 9807279
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  9807337 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 9807279  T

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Target: chr8; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 11760972 - 11760914
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  11760972 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 11760914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 65 - 134
Target Start/End: Complemental strand, 25825371 - 25825301
Alignment:
Q  65 aatataaacaatgcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| || ||||||||| |||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  25825371 aatataaaaaaggcttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 25825301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 44553149 - 44553187
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  44553149 ccttaagtatttatttggtatcgttttggtcccttaact 44553187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 3443029 - 3443090
Alignment:
Q  74 aatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||| || |||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  3443029 aatgcttaaatgctcatttggtcccttaagtatttaattggtatcgctttggtcccttaact 3443090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 9739278 - 9739335
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||| ||||||||| |||  |||||| |||||||||||||||||||||||||    
T  9739278 cttaaatgtttttttggtcccttaactatttaattggtatcgttttggtcccttaact 9739335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 15271125 - 15271182
Alignment:
Q  78 cttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| |||| ||||||| ||||||||  |||||||||||||||    
T  15271125 cttaaatgttcttttggtcacttaagtatttaattggtatcactttggtcccttaact 15271182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 23017244 - 23017187
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  23017244 cttaaatgctcttttggtcccttaagtatttagttggtatcggtttggtcccttaact 23017187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 16906521 - 16906465
Alignment:
Q  77 gcttaaatgttcttttggtccttag-gtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||||||| ||||||| | | ||||||||||||||||| |||||||||||||    
T  16906521 gcttaaatgttctcttggtcccttgagtatttatttggtatcgctttggtcccttaa 16906465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 30864166 - 30864222
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  30864166 ttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 30864222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 761394 - 761452
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  761394 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 761452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 2221595 - 2221653
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  2221595 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 2221653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 3292018 - 3292076
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||  |||||||||| |||  |||||| |||||||||||||||||||||||||    
T  3292018 gcttaaatgcacttttggtcccttaattatttaattggtatcgttttggtcccttaact 3292076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 7116473 - 7116531
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  7116473 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 7116531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 147 - 197
Target Start/End: Original strand, 9317095 - 9317145
Alignment:
Q  147 gtttgagtactttaatttaatttttgttacattttttggtcccttccgtta 197  Q
    |||| |||||||||||||||||||||||||| ||||| |||| ||| ||||    
T  9317095 gttttagtactttaatttaatttttgttacactttttagtccattcagtta 9317145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 9739842 - 9739784
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  9739842 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 9739784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 11713201 - 11713259
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  11713201 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 11713259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 14897453 - 14897395
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||| |||||||||||||||    
T  14897453 gcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 14897395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 22013463 - 22013521
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  22013463 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 22013521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 22014009 - 22013951
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||||    
T  22014009 gcttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 22013951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 22323998 - 22323940
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||  |||||||||||||||    
T  22323998 gcttaaatgctcttttggtcccttaagtatttaattggtatcactttggtcccttaact 22323940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 26060107 - 26060165
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  26060107 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 26060165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 26060689 - 26060631
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  26060689 gcttaaatgctcttttggtcccttaattatttaattggtatcgctttggtcccttaact 26060631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 27786542 - 27786484
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  27786542 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27786484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 31445670 - 31445728
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  31445670 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31445728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 33099027 - 33098969
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  33099027 gcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact 33098969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 41154618 - 41154676
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  41154618 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 41154676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 41155071 - 41155013
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  41155071 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 41155013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 41658401 - 41658459
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||| ||||||||||    
T  41658401 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttgatcccttaact 41658459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 42193780 - 42193838
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  42193780 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 42193838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 45123221 - 45123279
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  45123221 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45123279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 45123672 - 45123614
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||| ||||||    
T  45123672 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcctttaact 45123614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 7775001 - 7775058
Alignment:
Q  78 cttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| ||||||||| |||||  |||||| |||||||||||||||||| ||||||    
T  7775001 cttaaatgctcttttggttccttaactatttaattggtatcgttttggtccattaact 7775058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 164
Target Start/End: Complemental strand, 15271648 - 15271562
Alignment:
Q  78 cttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaattt 164  Q
    |||||||| |||||||||||||| ||||||| ||||||||  |||| ||| ||||||         |||||||||||||||||||||    
T  15271648 cttaaatgctcttttggtccttaagtatttaattggtatcactttgatcctttaactaaaaaaaatattgtttgagtactttaattt 15271562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 132
Target Start/End: Original strand, 21014952 - 21014989
Alignment:
Q  95 tccttaggtatttatttggtatcgttttggtcccttaa 132  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  21014952 tccttaagtatttatttggtatcgttttggtcctttaa 21014989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 43086390 - 43086447
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| ||||||||||| |||  |||||| || ||||||||||||||||||||||    
T  43086390 cttaaatgctcttttggtcccttaactatttaattagtatcgttttggtcccttaact 43086447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 2222021 - 2221965
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  2222021 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 2221965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 78 - 133
Target Start/End: Original strand, 9317027 - 9317083
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaac 133  Q
    |||||||| ||||||||||| ||| ||||||||||| ||||  ||||||||||||||    
T  9317027 cttaaatgctcttttggtcccttaagtatttatttgatatcactttggtcccttaac 9317083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 10134609 - 10134661
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| |||||| |||| ||| ||||||||||||||||| |||||||||    
T  10134609 gcttaaatgctctttttgtcccttaagtatttatttggtatcgctttggtccc 10134661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 10134974 - 10134922
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| |||||||||| |||||| |||||||||    
T  10134974 gcttaaatgctcttttggtcctttaagtatttatttagtatcgctttggtccc 10134922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 13089441 - 13089497
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  13089441 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 13089497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 306
Target Start/End: Complemental strand, 13367014 - 13366954
Alignment:
Q  246 ttataggtggtccactaaagaccttagtaatacttttaatctcaaccgtttgatatttttt 306  Q
    ||||||||||||||| | |||||||| |||  |||||| | | ||||||||||||||||||    
T  13367014 ttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttttt 13366954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 40448734 - 40448782
Alignment:
Q  87 tcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  40448734 tcttttggtccattaagtatttaattggtatcgctttggtcccttaact 40448782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 40832137 - 40832189
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| | ||||||||||| | |||||||||||||||||||||| ||||    
T  40832137 gcttaaatgctattttggtcctttaagtatttatttggtatcgttttgatccc 40832189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 9e-71; HSPs: 39)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 77 - 382
Target Start/End: Original strand, 11129883 - 11130209
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| |||||||||| |||| ||||||||||||||||  |||||||||||||||         ||||||| ||||||||||||||||||||||||    
T  11129883 gcttaaatgctcttttggtctcttaagtatttatttggtatcactttggtcccttaactaataaaaagattgtttcagtactttaatttaatttttgtta 11129982  T
Q  176 cattttttggtcccttccgttaaggtcgtgaaaaaa-------ggggttaaccccaaatgtctcatgtgggctcacattataggtggtccactaaagacc 268  Q
    || ||||||||||||| |||||  || |||||||||       |||||||||||||||||||||  |||| ||||||||||||||||||||| |||||||    
T  11129983 cactttttggtccctttcgttagagttgtgaaaaaactgttgaggggttaaccccaaatgtctctggtggactcacattataggtggtccaccaaagacc 11130082  T
Q  269 ttagtaatacttttaatctcaaccgtttgata-------------ttttttattgaaaaacaaccattagatcatacatgtctacgggatctaactatat 355  Q
    |||||||||||||||| || || |||||||||             |||||||| ||||||||||||||| |||||||||||||||| |||||||||||||    
T  11130083 ttagtaatacttttaaccttaatcgtttgatattttttatagaatttttttatagaaaaacaaccattaaatcatacatgtctacgagatctaactatat 11130182  T
Q  356 accaccaacacttaatttgttttttag 382  Q
    |||||||||||||||||| ||||||||    
T  11130183 accaccaacacttaatttattttttag 11130209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 79 - 196
Target Start/End: Original strand, 16329748 - 16329866
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttaca 177  Q
    ||||||| |||||||||| |||| ||||||||||||||||| |||||||||||||||         |||||||||||||||||  || || | |||||      
T  16329748 ttaaatgctcttttggtctcttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctgttatc 16329847  T
Q  178 ttttttggtcccttccgtt 196  Q
    | |||||||||||||||||    
T  16329848 tgttttggtcccttccgtt 16329866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 3203188 - 3203130
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||| |||||||| ||| ||||||| ||||||| |||||||||||||||||    
T  3203188 gcttaaatgttcatttggtcccttaagtatttaattggtattgttttggtcccttaact 3203130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 5381537 - 5381595
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  5381537 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 5381595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 9401121 - 9401179
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  9401121 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 9401179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 16330896 - 16330838
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||| || ||| ||||||||||||||||| |||||||||||||||    
T  16330896 gcttaaatgctcttttggccccttaagtatttatttggtatcgctttggtcccttaact 16330838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 16712438 - 16712496
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  16712438 gcttaaatgctcttttggtcctttaagtatttaattggtatcgctttggtcccttaact 16712496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 16712904 - 16712846
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  16712904 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 16712846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 40537000 - 40537058
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| | ||||||| ||| |||||||||||||||||||||    
T  40537000 gcttaaatgctcttttggtcctttaagtatttagttgatatcgttttggtcccttaact 40537058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 12966286 - 12966229
Alignment:
Q  78 cttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| |||||||||| |||| ||||||| ||||||||| |||||||||||||||    
T  12966286 cttaaatgctcttttggtctcttaagtatttaattggtatcgctttggtcccttaact 12966229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 156 - 197
Target Start/End: Complemental strand, 36889724 - 36889683
Alignment:
Q  156 ctttaatttaatttttgttacattttttggtcccttccgtta 197  Q
    |||||||||||||||||||||| |||| ||||||||||||||    
T  36889724 ctttaatttaatttttgttacacttttcggtcccttccgtta 36889683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 11131238 - 11131183
Alignment:
Q  80 taaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| |||||| |||| ||| ||||||||||||||||| |||||||||||||||    
T  11131238 taaatgctcttttagtcccttaagtatttatttggtatcgctttggtcccttaact 11131183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 14287835 - 14287890
Alignment:
Q  79 ttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| |||||||||| ||| ||||||| ||| ||||| |||||||||||||||    
T  14287835 ttaaatgctcttttggtctttaagtatttaattgatatcgctttggtcccttaact 14287890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 2822305 - 2822363
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||| ||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  2822305 gcttaaatgtttttttggtcccttaactatttaattggtatcgctttggtcccttaact 2822363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 2970874 - 2970816
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  2970874 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 2970816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 4602874 - 4602816
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  4602874 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 4602816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 5382075 - 5382017
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| || |||||||| ||||  |||||| |||||||||||||||||||||||||    
T  5382075 gcttaaatatttttttggtctcttaactatttaattggtatcgttttggtcccttaact 5382017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 8885679 - 8885717
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  8885679 ccttaagtatttatttggtatcgctttggtcccttaact 8885717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 10708150 - 10708208
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||  |||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  10708150 gcttaaatgcgcttttggtcccttaagtatttatttggtatcactttggtcccttaact 10708208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 11714054 - 11713996
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| |||||  |||||| ||| ||||| |||||||||||||||    
T  11714054 gcttaaatgttcttttggtcccttaactatttaattgatatcgctttggtcccttaact 11713996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 12602634 - 12602596
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  12602634 ccttaagtatttatttggtatcgctttggtcccttaact 12602596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 13479489 - 13479431
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||| |||||||||||||||    
T  13479489 gcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 13479431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 18469594 - 18469652
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||||||| |||||||||||    
T  18469594 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttagtcccttaact 18469652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 32194886 - 32194828
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  32194886 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 32194828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 38806844 - 38806902
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||| ||||||||||||||||    
T  38806844 gcttaaatgctcttttggtcccttaactatttaattggtatcattttggtcccttaact 38806902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 38807242 - 38807184
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||| |||||||||||||||    
T  38807242 gcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 38807184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 39107818 - 39107760
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| ||||  |||||| ||||||||||||| |||||||||||    
T  39107818 gcttaaatgctcttttggtctcttaactatttaattggtatcgtttttgtcccttaact 39107760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 18950738 - 18950795
Alignment:
Q  77 gcttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||| ||||||   ||||  |||||||||||||||| |||||||||||||||    
T  18950738 gcttaaatgtgcttttgacacttaactatttatttggtatcgctttggtcccttaact 18950795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 187
Target Start/End: Original strand, 36888409 - 36888450
Alignment:
Q  146 tgtttgagtactttaatttaatttttgttacattttttggtc 187  Q
    ||||||||| ||||||||||||||||||||||  ||||||||    
T  36888409 tgtttgagtcctttaatttaatttttgttacaccttttggtc 36888450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 75 - 134
Target Start/End: Original strand, 4844047 - 4844107
Alignment:
Q  75 atgcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||| ||||||||| |||||  |||||| ||||||||| |||||| ||||||||    
T  4844047 atgcttaaatgctcttttggtcccttaactatttaattggtatcgctttggttccttaact 4844107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 12965789 - 12965845
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||||| ||||||| ||||| ||||||| ||| |||||||||| ||||||||    
T  12965789 gcttaaatgttattttggtcccttatgtatttaattgatatcgttttgttcccttaa 12965845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 14288376 - 14288320
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| ||| ||||||| ||| ||| |||||||||||||||    
T  14288376 gcttaaatgctcttttggtcccttaagtatttaattgatattgttttggtcccttaa 14288320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 246 - 306
Target Start/End: Original strand, 14509361 - 14509421
Alignment:
Q  246 ttataggtggtccactaaagaccttagtaatacttttaatctcaaccgtttgatatttttt 306  Q
    ||||||||||||||| | |||||||| |||  |||||| | | ||||||||||||||||||    
T  14509361 ttataggtggtccaccatagaccttattaaaccttttatttttaaccgtttgatatttttt 14509421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 17978154 - 17978098
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  17978154 ttaaatgctcttttggtccattaactatttaattggtatcgctttggtcccttaact 17978098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 134
Target Start/End: Original strand, 24181504 - 24181552
Alignment:
Q  87 tcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  24181504 tcttttggttccttaagtatttaattggtatcgttttggttccttaact 24181552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 25945827 - 25945879
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||| ||||| ||||||||| ||||||| |||||||||    
T  25945827 gcttaaatgatcttttggtcccttaagtatttattcggtatcgctttggtccc 25945879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 26424881 - 26424825
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||    
T  26424881 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 26424825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 32194445 - 32194501
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  32194445 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 32194501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 36065578 - 36065530
Alignment:
Q  79 ttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtc 126  Q
    ||||||| ||||||||||||| | |||||||||| ||||||||||||||    
T  36065578 ttaaatgctcttttggtcctttaagtatttatttagtatcgttttggtc 36065530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 107; Significance: 2e-53; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 148 - 373
Target Start/End: Complemental strand, 14859118 - 14858886
Alignment:
Q  148 tttgagtactttaatttaatttttgttacattttttggtcccttccgttaaggtcgtgaaaaaa-------ggggttaaccccaaatgtctcatgtgggc 240  Q
    |||||||  ||||| ||||||||  ||||| ||||||||||||||||||| ||| |||||||||       |||||||||||||||||||||| ||||||    
T  14859118 tttgagtcatttaaattaattttcattacactttttggtcccttccgttagggttgtgaaaaaactgttaaggggttaaccccaaatgtctcaggtgggc 14859019  T
Q  241 tcacattataggtggtccactaaagaccttagtaatacttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtctac 340  Q
      | |||||||||| ||||| |||| ||| ||||||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||    
T  14859018 caatattataggtgatccaccaaaggcctaagtaatatttttaatctcaaccgtttgatattttttacggaaaaacaaccattagatcatacatgtctac 14858919  T
Q  341 gggatctaactatataccaccaacacttaattt 373  Q
      |||||||| || |  ||||||||||||||||    
T  14858918 aagatctaacaatgtgtcaccaacacttaattt 14858886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 52254304 - 52254362
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||    
T  52254304 gcttaaatgctcttttggtcctttaagtatttatttggtatcgttttggtcccttaact 52254362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 53227192 - 53227245
Alignment:
Q  144 attgtttgagtactttaatttaatttttgttacattttttggtcccttccgtta 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||| | ||||||||    
T  53227192 attgtttgagtactttaatttaattttcgttacattttttggttcattccgtta 53227245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 80 - 134
Target Start/End: Complemental strand, 52255585 - 52255530
Alignment:
Q  80 taaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  52255585 taaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaact 52255530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 26246869 - 26246921
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||||    
T  26246869 gcttaaatgatcttttggtcccttaagtatttatttggtatcgttttggtccc 26246921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 52857342 - 52857286
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||    
T  52857342 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaa 52857286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 40503240 - 40503298
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  40503240 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 40503298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 43465176 - 43465126
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtccc 128  Q
    |||||||||||||||||| |||| |||||||||| ||||||||||||||||    
T  43465176 ttaaatgttcttttggtctcttaagtatttatttagtatcgttttggtccc 43465126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 48085296 - 48085238
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  48085296 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 48085238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 53228271 - 53228213
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||  ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  53228271 gcttaaatactcttttggtcccttaagtatttatttggtatcgctttggtcccttaact 53228213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 4953125 - 4953181
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| ||| | ||||||||||||||| |||||||||||||    
T  4953125 gcttaaatgctcttttggtcccttaaggatttatttggtatcgctttggtcccttaa 4953181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 13302013 - 13301961
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||    
T  13302013 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 13301961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 13312669 - 13312617
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||    
T  13312669 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 13312617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 24242449 - 24242505
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||    
T  24242449 gcttaaatgctcttttggtcccttaattatttaattggtatcgttttggtcccttaa 24242505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 43464813 - 43464865
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||    
T  43464813 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 43464865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 6099038 - 6098980
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||| |||||||||||||||    
T  6099038 gcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 6098980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 12739879 - 12739937
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  12739879 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 12739937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 12739965 - 12740023
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  12739965 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 12740023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 13355784 - 13355726
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||| |  |||||| ||||||||| |||||||||||||||    
T  13355784 gcttaaatgctcttttggtcctttaactatttaattggtatcgctttggtcccttaact 13355726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 24243054 - 24242996
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  24243054 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24242996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Original strand, 24244468 - 24244518
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||| ||||    
T  24244468 ttaaatgttcttttggtcccttaagtatttatttagtatcgttttgatccc 24244518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 79 - 128
Target Start/End: Complemental strand, 26247234 - 26247184
Alignment:
Q  79 ttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||||||||||| ||||| |||||||||| |||||| |||||||||    
T  26247234 ttaaatgttcttttggtcccttaagtatttatttagtatcgctttggtccc 26247184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 44475710 - 44475652
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  44475710 gcttaaatgctcttttggtccattaattatttaattggtatcgctttggtcccttaact 44475652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 44712122 - 44712064
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  44712122 gcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaact 44712064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 45940216 - 45940274
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  45940216 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45940274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 48082872 - 48082930
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| ||||| ||||||| ||||||||  |||| ||||||||||    
T  48082872 gcttaaatgttcttttggtcccttaagtatttaattggtatcactttgatcccttaact 48082930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 8101098 - 8101042
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||| ||| |||| ||||||| |||||||||||||| ||||||||||    
T  8101098 ttaaatgtttttttagtctcttaagtatttaattggtatcgttttgctcccttaact 8101042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 13355176 - 13355232
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    |||||||||||||||| |||| |||  |||||| ||||||||| |||||||||||||    
T  13355176 gcttaaatgttcttttagtcccttaactatttaattggtatcgctttggtcccttaa 13355232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 28919090 - 28919146
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||  ||| ||||||| ||||||||| |||||||||||||    
T  28919090 gcttaaatgctcttttggtcgattaagtatttaattggtatcgctttggtcccttaa 28919146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 91; Significance: 6e-44; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 145 - 340
Target Start/End: Original strand, 4890897 - 4891096
Alignment:
Q  145 ttgtttgagtactttaatttaatttttgttacattttttggtcccttccgttaaggtcgtgaaaaaa-------ggggttaaccccaaatgtctcatgtg 237  Q
    |||||||||| |||||| || ||||| |||||| |||||||||| ||||||||  || ||| |||||       ||||||||||||| |||||||| |||    
T  4890897 ttgtttgagtcctttaaatttattttcgttacactttttggtcctttccgttagagttgtggaaaaactgtttaggggttaaccccacatgtctcaggtg 4890996  T
Q  238 ggctcacattataggtggtccactaaagaccttagtaatacttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtc 337  Q
    |||  |||||||||||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||   |||||||||||||||||    
T  4890997 ggccaacattataggtggtccaccaaagaccttagtaatatttttaatctcaaccgtttggtattttttatggaaaaaca---attagatcatacatgtc 4891093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 89 - 197
Target Start/End: Original strand, 53594997 - 53595106
Alignment:
Q  89 ttttggtcctt-aggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacattttttggtc 187  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||| ||||||||||||||||    
T  53594997 ttttggtcctttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgttacattttttggtc 53595096  T
Q  188 ccttccgtta 197  Q
    | ||||||||    
T  53595097 cattccgtta 53595106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 194
Target Start/End: Complemental strand, 2735658 - 2735541
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| ||||||||||| |||  |||||||||||||||| |||||||| ||||||         ||| ||| || |||||||||||||||| ||||    
T  2735658 gcttaaatgctcttttggtcccttaaatatttatttggtatcgctttggtcctttaactaaaaaaaagatttttt-agcactttaatttaattttcgtta 2735560  T
Q  176 cattttttggtcccttccg 194  Q
    |||||||||||||||||||    
T  2735559 cattttttggtcccttccg 2735541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 79 - 192
Target Start/End: Original strand, 43629182 - 43629296
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttaca 177  Q
    ||||||| |||||||||| |||| |||||||||||||||||||||||| ||||||||        |||||||||||||||||| ||| || | ||||||     
T  43629182 ttaaatgctcttttggtctcttaagtatttatttggtatcgttttggttccttaactaaaaaaaaaattgtttgagtactttatttttatctatgttacc 43629281  T
Q  178 ttttttggtcccttc 192  Q
    | |||||||| ||||    
T  43629282 tgttttggtctcttc 43629296  T

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Target: chr4; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 81 - 198
Target Start/End: Complemental strand, 50282983 - 50282867
Alignment:
Q  81 aaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacatt 179  Q
    ||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||        |||||||| |||||||||  || || | |||||| |     
T  50282983 aaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaa--aattgtttaagtactttatctttatctctgttacctg 50282886  T
Q  180 ttttggtcccttccgttaa 198  Q
    |||||||||||||||||||    
T  50282885 ttttggtcccttccgttaa 50282867  T

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Target: chr4; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 53596205 - 53596148
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||    
T  53596205 cttaaatgttcttttggtcccttaagtatttatttggtatcgttttggttccttaact 53596148  T

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Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 2734800 - 2734856
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  2734800 ttaaatgttcttttggtcccttaagtatttattttgtatcgttttggtcccttaact 2734856  T

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Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 35017054 - 35017003
Alignment:
Q  77 gcttaaatgttcttttggtccttaggtatttatttggtatcgttttggtccc 128  Q
    |||||||||||||||||||||||| ||||||||||||||| | |||||||||    
T  35017054 gcttaaatgttcttttggtccttaagtatttatttggtattgctttggtccc 35017003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 44182563 - 44182621
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| || |||||||||| | |||||||||||||||||||||||||||||||||    
T  44182563 gcttaaatgctcatttggtcctttaagtatttatttggtatcgttttggtcccttaact 44182621  T

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Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 96 - 198
Target Start/End: Complemental strand, 26281287 - 26281185
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacattttttggtcccttccgt 195  Q
    ||||| |||||||||||||||||||||||||||||||||         |||||||||||||||||  || || |  ||||| | ||||||||||||||||    
T  26281287 ccttaagtatttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctccgttacctattttggtcccttccgt 26281188  T
Q  196 taa 198  Q
    |||    
T  26281187 taa 26281185  T

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Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 46308093 - 46308036
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  46308093 cttaaatgttcttttggtcccttaactatttaattggtatcgttttggtcccttaact 46308036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 14947746 - 14947686
Alignment:
Q  75 atgcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||||| ||||| ||||||| ||||||||| ||||||| |||||||    
T  14947746 atgcttaaatgttcttttggtcccttaagtatttaattggtatcgctttggtctcttaact 14947686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 75 - 134
Target Start/End: Complemental strand, 25619151 - 25619091
Alignment:
Q  75 atgcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  25619151 atgcttaaatgttcttttggtctcttaactatttaattggtatcgctttggtcccttaact 25619091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 279 - 339
Target Start/End: Complemental strand, 49896512 - 49896452
Alignment:
Q  279 ttttaatctcaaccgtttgatattttttattgaaaaacaaccattagatcatacatgtcta 339  Q
    ||||||| | ||||||||||||||||||||| ||| | |||||||||||||| ||||||||    
T  49896512 ttttaatttaaaccgtttgatattttttattaaaagagaaccattagatcatgcatgtcta 49896452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 1370150 - 1370103
Alignment:
Q  87 tcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||| ||||||| |||||||||||||||||| ||||||    
T  1370150 tcttttggtccttaagtatttaattggtatcgttttggtcctttaact 1370103  T

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Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 131
Target Start/End: Original strand, 44795753 - 44795808
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccctta 131  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||||||||||||||||    
T  44795753 gcttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtccctta 44795808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 9091425 - 9091483
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| |||||||||||| |||| |||||||||||||||    
T  9091425 gcttaaatgctcttttggtcccttaagtatttatttggaatcgctttggtcccttaact 9091483  T

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Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 11815861 - 11815919
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||| |||||||||| |||  |||||||||||||||| |||||||||||||||    
T  11815861 gcttaaatgtgcttttggtcccttaactatttatttggtatcgctttggtcccttaact 11815919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 22309523 - 22309465
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||| ||||  |||||  |||||||||||||||||||||||||    
T  22309523 gcttaaatgttcttttggtctcttaactatttcattggtatcgttttggtcccttaact 22309465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 37208316 - 37208374
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  37208316 gcttaaatgatcttttggtcccttaactatttaattggtatcgttttggtcccttaact 37208374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 44303516 - 44303574
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  44303516 gcttaaatgttcttttggtcccttaactatttaattggtatcgctttggtcccttaact 44303574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 45046965 - 45046907
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||  |||||||||||| |  ||||||||||||||||||||||||||||||||    
T  45046965 gcttaaatgcgcttttggtcctttaactatttatttggtatcgttttggtcccttaact 45046907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 63 - 134
Target Start/End: Original strand, 22813345 - 22813417
Alignment:
Q  63 ctaatataaacaatgcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||  | ||||||||| ||||||||| ||||| ||||||| ||||||||  |||||||||||||||    
T  22813345 ctaatataaaataggcttaaatgctcttttggttccttaagtatttaattggtatcactttggtcccttaact 22813417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 77 - 127
Target Start/End: Original strand, 14251197 - 14251248
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcc 127  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| ||||||||    
T  14251197 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcc 14251248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 64 - 134
Target Start/End: Original strand, 40256086 - 40256157
Alignment:
Q  64 taatataaacaatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| || || ||||||||| ||||||||||| ||| ||||||| ||||||| | |||||||||||||||    
T  40256086 taatattaaaaaggcttaaatgatcttttggtcccttaagtatttaattggtattgctttggtcccttaact 40256157  T

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Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 1098054 - 1098112
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  1098054 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 1098112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 1098453 - 1098395
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||||    
T  1098453 gcttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 1098395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 17475398 - 17475456
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  17475398 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 17475456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 17475940 - 17475882
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  17475940 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 17475882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 20614116 - 20614174
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| |||||  |||||| ||||||||| |||||||| ||||||    
T  20614116 gcttaaatgttcttttggtcccttaactatttaattggtatcgctttggtcctttaact 20614174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 20614673 - 20614615
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  20614673 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 20614615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 25618437 - 25618495
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  25618437 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 25618495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Original strand, 26280095 - 26280133
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||||||||||||||||||| |||||||    
T  26280095 ccttaagtatttatttggtatcgttttggtctcttaact 26280133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 31487979 - 31488037
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  31487979 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31488037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 34238004 - 34237946
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| | ||||||||| |||  |||||| |||||||||||||||||||||||||    
T  34238004 gcttaaatgctattttggtcccttaactatttaattggtatcgttttggtcccttaact 34237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 41610128 - 41610186
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  41610128 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 41610186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 42369566 - 42369508
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  42369566 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 42369508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 44304419 - 44304361
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  44304419 gcttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 44304361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 56271273 - 56271215
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  56271273 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 56271215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 9087420 - 9087359
Alignment:
Q  73 caatgcttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||   ||||||||||||  |||||||||| |||| ||||| ||||||||||    
T  9087420 caatgcttaaatgcgtttttggtccttaactatttatttgatatcattttgttcccttaact 9087359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 78 - 134
Target Start/End: Complemental strand, 34543109 - 34543052
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||  ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  34543109 cttaaatactcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 34543052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 51399583 - 51399526
Alignment:
Q  77 gcttaaatgttctttt-ggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| |||||| ||||| ||| ||||||||||||||||| |||||||||||||    
T  51399583 gcttaaatgctctttttggtcccttaagtatttatttggtatcgctttggtcccttaa 51399526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 34237484 - 34237540
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  34237484 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 34237540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 87 - 134
Target Start/End: Complemental strand, 44183853 - 44183805
Alignment:
Q  87 tcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||| |||  |||||||||||||| |||||||||||||||||    
T  44183853 tcttttggtcccttaaatatttatttggtattgttttggtcccttaact 44183805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 44796233 - 44796177
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||||||| ||| ||| ||| ||||||| |||||||||||||| ||||||||    
T  44796233 gcttaaatgttctattgatcccttaagtatttaattggtatcgttttgctcccttaa 44796177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 46058698 - 46058754
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  46058698 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 46058754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 48453636 - 48453692
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  48453636 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 48453692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 5e-26; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 77 - 197
Target Start/End: Complemental strand, 28866477 - 28866356
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| |||||||||| ||||  |||||||||||||||| |||||||||||||||         ||||||||||||||||||||||||||| ||||    
T  28866477 gcttaaatgctcttttggtctcttaaatatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgtta 28866378  T
Q  176 cattttttggtcccttccgtta 197  Q
    ||||||||||||| ||||||||    
T  28866377 cattttttggtccattccgtta 28866356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 144 - 197
Target Start/End: Original strand, 12586728 - 12586781
Alignment:
Q  144 attgtttgagtactttaatttaatttttgttacattttttggtcccttccgtta 197  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  12586728 attgtttgagtactttaatttaattttcgttacattttttggtcccttccgtta 12586781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 13703382 - 13703440
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  13703382 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 13703440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 200
Target Start/End: Complemental strand, 20489428 - 20489374
Alignment:
Q  146 tgtttgagtactttaatttaatttttgttacattttttggtcccttccgttaagg 200  Q
    ||||||||| ||||||||| ||||| |||||| ||||||||||||||||| ||||    
T  20489428 tgtttgagtcctttaattttattttcgttacactttttggtcccttccgtcaagg 20489374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 715105 - 715048
Alignment:
Q  77 gcttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||||||  |||||| ||||||||| |||| ||||||||||    
T  715105 gcttaaatgctcttttggtccttaactatttaattggtatcgctttgatcccttaact 715048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 10914563 - 10914619
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  10914563 ttaaatgttcttttggtctcttaaatatttaattggtatcgctttggtcccttaact 10914619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 89 - 134
Target Start/End: Original strand, 901431 - 901477
Alignment:
Q  89 ttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||| | ||||||||||||||||| |||||||||||||||    
T  901431 ttttggtcctttaagtatttatttggtatcgctttggtcccttaact 901477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 902810 - 902752
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| || ||||||| || | ||||||||||||||||| |||||||||||||||    
T  902810 gcttaaatgctcatttggtcttttaagtatttatttggtatcgctttggtcccttaact 902752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 9424965 - 9424907
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||||    
T  9424965 gcttaaatgctcttttggtgccttaactatttaattggtatcgctttggtcccttaact 9424907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 17383736 - 17383794
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  17383736 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 17383794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 21271487 - 21271545
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  21271487 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 21271545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 21272176 - 21272118
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  21272176 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 21272118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 22498824 - 22498766
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  22498824 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 22498766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 26392902 - 26392844
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  26392902 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 26392844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 28865600 - 28865658
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| | ||||||||||| |  |||||||||||||||||||||||| |||||||    
T  28865600 gcttaaatgctattttggtcctttaaatatttatttggtatcgttttggtctcttaact 28865658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 31739972 - 31739914
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  31739972 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31739914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 959374 - 959322
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| |||||||||||| |||| |||||||||    
T  959374 gcttaaatgctcttttggtcccttaagtatttatttgggatcgctttggtccc 959322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 12586909 - 12586853
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| |||||| |||| ||| ||||||||||||||||  |||||||||||||    
T  12586909 gcttaaatgctcttttcgtcccttaagtatttatttggtatcactttggtcccttaa 12586853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 14527572 - 14527516
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  14527572 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 14527516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 17383990 - 17383934
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||    
T  17383990 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 17383934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 145 - 197
Target Start/End: Original strand, 20488330 - 20488382
Alignment:
Q  145 ttgtttgagtactttaatttaatttttgttacattttttggtcccttccgtta 197  Q
    |||||| ||| ||||||||| || | |||||||| ||||||||||||||||||    
T  20488330 ttgtttcagtcctttaatttcatctctgttacatattttggtcccttccgtta 20488382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 5e-23; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 28904631 - 28904747
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnnta-attgtttgagtactttaatttaatttttgtt 174  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||        | ||| ||||||||||||||||||||||| |||    
T  28904631 gcttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaactaaaaaaaaagattatttgagtactttaatttaattttcgtt 28904730  T
Q  175 acattttttggtccctt 191  Q
    |||||||||||||||||    
T  28904731 acattttttggtccctt 28904747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 191
Target Start/End: Original strand, 28941026 - 28941142
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnnta-attgtttgagtactttaatttaatttttgtt 174  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||| ||||||||||        | ||| ||||||||||||||||||||||| |||    
T  28941026 gcttaaatgctcttttggtcccttaagtatttatttggtatcgttttgatcccttaactaaaaaaaaagattatttgagtactttaatttaattttcgtt 28941125  T
Q  175 acattttttggtccctt 191  Q
    |||||||||||||||||    
T  28941126 acattttttggtccctt 28941142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 77 - 192
Target Start/End: Original strand, 30644915 - 30645031
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| ||||||||||| |||  |||||||||||||||| | |||||||||||||         ||||||||||||||||||||||||||| ||||    
T  30644915 gcttaaatgctcttttggtcccttaaatatttatttggtatcgctatggtcccttaactaaaaaaaagattgtttgagtactttaatttaattttcgtta 30645014  T
Q  176 cattttttggtcccttc 192  Q
    |||||||||||||||||    
T  30645015 cattttttggtcccttc 30645031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 28905514 - 28905392
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||        ||||||||||||||||||  || || | |||||    
T  28905514 gcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttatctttatctctgtta 28905415  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | ||||||||||||| |||||    
T  28905414 cctgttttggtcccttctgttaa 28905392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 28941909 - 28941787
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||||||||||||||| ||| ||||||||||||||||| |||||||||||||||        ||||||||||||||||||  || || | |||||    
T  28941909 gcttaaatgttcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttatctttatctctgtta 28941810  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | ||||||||||||| |||||    
T  28941809 cctgttttggtcccttctgttaa 28941787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 105 - 197
Target Start/End: Complemental strand, 14348242 - 14348151
Alignment:
Q  105 tttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgttacattttttggtcccttccgtta 197  Q
    ||||||||||||||||||||||||||||||         |||||||| |||||||||||||||||| ||||||||||||||| ||||||||||    
T  14348242 tttatttggtatcgttttggtcccttaactaaaaaaaagattgtttgggtactttaatttaattttcgttacattttttggt-ccttccgtta 14348151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 77 - 194
Target Start/End: Original strand, 39547778 - 39547896
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| | ||||||||| |||  |||||||||||||||| |||||||| ||||||         ||||||| || |||||||||||||||| ||||    
T  39547778 gcttaaatgcttttttggtcccttaaatatttatttggtatcgctttggtcctttaactaaaaaaaagattgttttagcactttaatttaattttcgtta 39547877  T
Q  176 cattttttggtcccttccg 194  Q
    |||||||||||||||||||    
T  39547878 cattttttggtcccttccg 39547896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 30645784 - 30645662
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||         |||||||||||||||||  || || | |||||    
T  30645784 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaactaaaaaaaagattgtttgagtactttatctttatctctgtta 30645685  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | ||||||||||||| |||||    
T  30645684 cctgttttggtcccttctgttaa 30645662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 14347402 - 14347460
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||||||||    
T  14347402 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtcccttaact 14347460  T

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Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 19797665 - 19797723
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| || |||||||| ||| |||||||||||||||||||||||||||||||||    
T  19797665 gcttaaatgctcgtttggtcccttaagtatttatttggtatcgttttggtcccttaact 19797723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 39548657 - 39548599
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||||||||    
T  39548657 gcttaaatgctcttttggtcccttaagtatttattttgtatcgttttggtcccttaact 39548599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 77 - 161
Target Start/End: Original strand, 1095496 - 1095581
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaa 161  Q
    |||||||||||||||| ||| |||| ||||||| ||||||||| |||||||||||||||        |||||||||||||||||||    
T  1095496 gcttaaatgttcttttagtctcttaagtatttaattggtatcgctttggtcccttaactaaaaaaaaaattgtttgagtactttaa 1095581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 60 - 134
Target Start/End: Original strand, 27098524 - 27098599
Alignment:
Q  60 tcactaatataaacaatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||| ||||||||| ||| ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  27098524 tcacaaatataaactatggttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27098599  T

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Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 3721586 - 3721644
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||| || |||| ||||||| ||| |||||||||||||||||||||    
T  3721586 gcttaaatgttcttttgatctcttaagtatttaattgctatcgttttggtcccttaact 3721644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 13668566 - 13668508
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  13668566 gcttaaatgctcttttggtccattaagtatttaattggtatcgctttggtcccttaact 13668508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 19798777 - 19798719
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||  |||||||||||||||    
T  19798777 gcttaaatgctcttttggtcccttaagtatttatttggtatcactttggtcccttaact 19798719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 39024014 - 39023956
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| |||||||  ||||||||||||||||||||||||    
T  39024014 gcttaaatgctcttttggtcccttaagtatttagatggtatcgttttggtcccttaact 39023956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 198
Target Start/End: Complemental strand, 37192529 - 37192407
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||||  ||||||||| |||  |||||||||||||||| |||||||||||||||         ||| |||||||||||||  || || | |||||    
T  37192529 gcttaaatgtgtttttggtcccttaactatttatttggtatcgctttggtcccttaactaaaaaaaagattatttgagtactttatatttatctctgtta 37192430  T
Q  176 cattttttggtcccttccgttaa 198  Q
    | | |||||||||||||||||||    
T  37192429 cctgttttggtcccttccgttaa 37192407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 435930 - 435874
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| |||  |||||| ||||||| |||||||||||||||||    
T  435930 ttaaatgttcttttggtcccttaactatttaattggtattgttttggtcccttaact 435874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 161
Target Start/End: Complemental strand, 5187178 - 5187093
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaa 161  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||       | ||||||||||||||||||    
T  5187178 gcttaaatgctcttttggtcccttaaatatttaattggtatcgctttggtcccttaactaaaaaaatgattgtttgagtactttaa 5187093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 17115685 - 17115633
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  17115685 gcttaaatgctcttttggtcccttacgtatttatttagtatcgttttggtccc 17115633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 30645164 - 30645108
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| |||||| |||| ||| |||||||||||||||| ||||||||||||||    
T  30645164 gcttaaatgctcttttcgtcccttaagtatttatttggtatcattttggtcccttaa 30645108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 435555 - 435613
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  435555 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 435613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 1031361 - 1031303
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||||| ||||  |||||| ||||||||| |||||||||||||||    
T  1031361 gcttaaatgctcttttggtctcttaactatttaattggtatcgctttggtcccttaact 1031303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 4076956 - 4077006
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtc 126  Q
    ||||||||||||||||||| ||||| ||||||| ||||||| |||||||||    
T  4076956 gcttaaatgttcttttggtcccttaagtatttaattggtattgttttggtc 4077006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 6157554 - 6157496
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  6157554 gcttaaatgctcttttggtcccttaactatttaattggtatcgatttggtcccttaact 6157496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 7265671 - 7265613
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| |||||  |||||| ||||||||| |||||| ||||||||    
T  7265671 gcttaaatgttcttttggtcccttaactatttaattggtatcgctttggttccttaact 7265613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 11079687 - 11079629
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| | ||||||||| |||  |||||| |||||||||||||||||||||||||    
T  11079687 gcttaaatgctattttggtcccttaactatttaattggtatcgttttggtcccttaact 11079629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 16669507 - 16669565
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||||  |||||| ||||||||| |||||||||||||||    
T  16669507 gcttaaatgctcttttggttccttaactatttaattggtatcgctttggtcccttaact 16669565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 16670085 - 16670027
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  16670085 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 16670027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 17420630 - 17420688
Alignment:
Q  77 gcttaaatgttcttttgg-tccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||| | |||| ||||||| ||||||||| |||||||| ||||||    
T  17420630 gcttaaatgttcttttggtttcttaagtatttaattggtatcgctttggtcctttaact 17420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 96 - 134
Target Start/End: Complemental strand, 24042716 - 24042678
Alignment:
Q  96 ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  24042716 ccttaagtatttatttggtatcgctttggtcccttaact 24042678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 24100757 - 24100699
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  24100757 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24100699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 27851100 - 27851042
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  27851100 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27851042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 29962238 - 29962180
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  29962238 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 29962180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 30012560 - 30012618
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  30012560 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 30012618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 37191594 - 37191652
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||| |||||||||| |||  | |||||||||||||| |||||||||||||||    
T  37191594 gcttaaatgtgcttttggtcccttaactgtttatttggtatcgctttggtcccttaact 37191652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 38312326 - 38312384
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  38312326 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 38312384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 42767750 - 42767692
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||| |||||||||| |||  |||||||||||||||| |||||||| ||||||    
T  42767750 gcttaaatgtgcttttggtcccttaactatttatttggtatcgatttggtcctttaact 42767692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 77 - 129
Target Start/End: Original strand, 14348023 - 14348076
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccct 129  Q
    ||||||||| | ||||||||| ||| |||||||||||||||| |||||||||||    
T  14348023 gcttaaatgctattttggtcccttaagtatttatttggtatcattttggtccct 14348076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 81 - 132
Target Start/End: Original strand, 14662368 - 14662420
Alignment:
Q  81 aaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||| ||||||||||| ||| |||||||||||| |||| |||||||||||||    
T  14662368 aaatgctcttttggtcccttaagtatttatttggcatcgctttggtcccttaa 14662420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 20243369 - 20243417
Alignment:
Q  79 ttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtc 126  Q
    ||||||||||||||||| ||||| ||||||| || ||||||||||||||    
T  20243369 ttaaatgttcttttggtcccttaagtatttaatttgtatcgttttggtc 20243417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 83 - 134
Target Start/End: Original strand, 27121629 - 27121681
Alignment:
Q  83 atgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  27121629 atgtttttttggtcccttaagtatttaattggtatcgctttggtcccttaact 27121681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Original strand, 35463563 - 35463619
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||||||||||||| |||| ||||||||    
T  35463563 gcttaaatgctcttttggtcccttaaatatttatttggtatcgctttgatcccttaa 35463619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 146 - 199
Target Start/End: Complemental strand, 91485 - 91432
Alignment:
Q  146 tgtttgagtactttaatttaatttttgttacattttttggtcccttccgttaag 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||    
T  91485 tgtttgagtactttaatttaatttttgttacagcttttggtcccttccgttaag 91432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 39; Significance: 0.0000000000007; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 28461042 - 28460984
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  28461042 gcttaaatgttcttttggtcccttaagtatttaattggtatcgctttggtcccttaact 28460984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 48094841 - 48094899
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  48094841 gcttaaatgttcttttggtcccttaactatttaattggtatcgttttggtcccttaact 48094899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 8685948 - 8685892
Alignment:
Q  79 ttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||| | ||||| |||||||||||||||||||||||||||||||||    
T  8685948 ttaaatgctcttttgattccttaagtatttatttggtatcgttttggtcccttaact 8685892  T

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Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 77 - 188
Target Start/End: Original strand, 17236065 - 17236177
Alignment:
Q  77 gcttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaactnnnnnnntaattgtttgagtactttaatttaatttttgtta 175  Q
    ||||||||| ||||||||||||| | ||||||||||||||||| ||||| |||||||||         ||||||||||||||||| ||| || |  ||||    
T  17236065 gcttaaatgctcttttggtcctttaagtatttatttggtatcgctttggccccttaactaaaaaaaagattgtttgagtactttatttttatctccgtta 17236164  T
Q  176 cattttttggtcc 188  Q
    ||| |||||||||    
T  17236165 catgttttggtcc 17236177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 21433105 - 21433047
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||| |||||||||||||||    
T  21433105 gcttaaatgctcttttggtccattaagtatttaattggtatcgctttggtcccttaact 21433047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 126
Target Start/End: Original strand, 30283919 - 30283969
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtc 126  Q
    ||||||||| ||||||||||| ||| |||||||||||||||||||||||||    
T  30283919 gcttaaatgctcttttggtcccttaagtatttatttggtatcgttttggtc 30283969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 39143147 - 39143205
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  39143147 gcttaaatgctcttttggtcccttaactatttaattggtatcgttttggtcccttaact 39143205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 79 - 132
Target Start/End: Original strand, 41911279 - 41911332
Alignment:
Q  79 ttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| |||| ||||||| ||||||| ||||||||| |||||||||||||    
T  41911279 ttaaatgtttttttagtccttaagtatttaattggtatcgctttggtcccttaa 41911332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 42753915 - 42753972
Alignment:
Q  77 gcttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| |||||||| ||||| ||||||||||||||||| |||| ||| ||||||    
T  42753915 gcttaaatgctcttttggcccttaagtatttatttggtatcgctttgatcctttaact 42753972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 78 - 134
Target Start/End: Original strand, 45995269 - 45995326
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||||||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  45995269 cttaaatgttcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45995326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 75 - 126
Target Start/End: Original strand, 472597 - 472649
Alignment:
Q  75 atgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtc 126  Q
    ||||||||||| ||||||||||| ||| |||||||||| ||||||||||||||    
T  472597 atgcttaaatgctcttttggtcccttaagtatttatttagtatcgttttggtc 472649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 28460566 - 28460622
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| ||| ||||||| |||||||||||||||||| ||||||    
T  28460566 ttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtcctttaact 28460622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 44333002 - 44333058
Alignment:
Q  79 ttaaatgttcttttggtcctt-aggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||||| | ||||||| ||||||||| |||||||||||||||    
T  44333002 ttaaatgctcttttggtcctttaagtatttaattggtatcgctttggtcccttaact 44333058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 29933764 - 29933709
Alignment:
Q  79 ttaaatgttcttttggtccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| || ||||||| ||| ||||| |||||||||||||||    
T  29933764 ttaaatgctcttttggtccctaagtatttaattgatatcgctttggtcccttaact 29933709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 78 - 132
Target Start/End: Original strand, 44495705 - 44495760
Alignment:
Q  78 cttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    |||||||| ||||||||||| ||| ||||||| |||||||| ||||||||||||||    
T  44495705 cttaaatgctcttttggtcccttaagtatttaattggtatcattttggtcccttaa 44495760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 713119 - 713061
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||||||||||| |||||||    
T  713119 gcttaaatgctcttttggtcccttaattatttaattggtatcgttttggtctcttaact 713061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 3217811 - 3217753
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  3217811 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 3217753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 5905129 - 5905187
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||| ||| |||  |||||| ||||||||| |||||||||||||||    
T  5905129 gcttaaatgttcttttgatcccttaactatttaattggtatcgctttggtcccttaact 5905187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 7776458 - 7776516
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||||| |||||  |||||| ||| ||||| |||||||||||||||    
T  7776458 gcttaaatgttcttttggtcccttaactatttaattgatatcgctttggtcccttaact 7776516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 7777014 - 7776956
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  7777014 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 7776956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 13965041 - 13965099
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  13965041 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 13965099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 14683051 - 14682993
Alignment:
Q  77 gcttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||  |||||||| ||||  |||||||||||||||| |||||||||||||||    
T  14683051 gcttaaatgtgtttttggtctcttaactatttatttggtatcgctttggtcccttaact 14682993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 18297155 - 18297213
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||  ||||| ||||| ||||||||||||||||| |||| ||||||||||    
T  18297155 gcttaaatgttcaattggttccttaagtatttatttggtatcgctttgatcccttaact 18297213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 18458277 - 18458335
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||  ||||||||||| |||  |||||| |||||||||||||||||||||||||    
T  18458277 gcttaaatactcttttggtcccttaactatttaattggtatcgttttggtcccttaact 18458335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 20493746 - 20493804
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  20493746 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 20493804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 20494285 - 20494227
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||  ||||||||| |||  |||||| |||||||||||||||||||||||||    
T  20494285 gcttaaatgtgtttttggtcccttaattatttaattggtatcgttttggtcccttaact 20494227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 24733630 - 24733688
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  24733630 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 24733688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 27284243 - 27284301
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  27284243 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27284301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 27284666 - 27284608
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  27284666 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 27284608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 31852139 - 31852081
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  31852139 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 31852081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 32072299 - 32072357
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||| ||||| |||||||||||||||    
T  32072299 gcttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtcccttaact 32072357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 34620217 - 34620275
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||||| |||||||||| ||||| ||||||| ||||||||| ||||||| |||||||    
T  34620217 gcttaaatattcttttggtcccttacgtatttaattggtatcgctttggtctcttaact 34620275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 34621842 - 34621784
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| ||||| ||||||| ||||||||| ||||||| |||||||    
T  34621842 gcttaaatgctcttttggtcccttaagtatttaattggtatcgctttggtctcttaact 34621784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 36721050 - 36720992
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||| ||||| |||||||||||||||    
T  36721050 gcttaaatgctcttttggtcccttaagtatttaattgatatcgctttggtcccttaact 36720992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 36951633 - 36951575
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||| |||||||||||||||||||||    
T  36951633 gcttaaatgctcttttggtcccttaattatttaattgatatcgttttggtcccttaact 36951575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 37374514 - 37374456
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  37374514 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 37374456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 38444033 - 38444091
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| ||| ||||||| ||||||||||||||||  |||||||    
T  38444033 gcttaaatgctcttttggtcccttaagtatttaattggtatcgttttggttgcttaact 38444091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 39143568 - 39143510
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  39143568 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 39143510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 40852217 - 40852159
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  40852217 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 40852159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 41691926 - 41691984
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||  ||||||||| |||  |||||| |||||||||||||||||||||||||    
T  41691926 gcttaaatgtatttttggtcccttaactatttaattggtatcgttttggtcccttaact 41691984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 41911876 - 41911818
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| | ||||||| ||||| ||||||| |||||||||||||||| ||||||||    
T  41911876 gcttaaatgctattttggttccttaagtatttagttggtatcgttttggttccttaact 41911818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 44496135 - 44496077
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||| ||||||||||||||| ||| |||||||  |||||||| |||||||||||||||    
T  44496135 gcttagatgttcttttggtcccttaagtatttaactggtatcgctttggtcccttaact 44496077  T

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Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 45456735 - 45456793
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  45456735 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 45456793  T

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Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 47987328 - 47987386
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  47987328 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 47987386  T

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Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 74 - 134
Target Start/End: Original strand, 8090819 - 8090880
Alignment:
Q  74 aatgcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||| ||||||||| ||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  8090819 aatgtttaaatgtttttttggtcccttaactatttaattggtatcgctttggtcccttaact 8090880  T

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Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 5101538 - 5101482
Alignment:
Q  77 gcttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||||||||||||| |||||  |||||| |||||||||||||| || |||||    
T  5101538 gcttaaatgttcttttggtcccttaaatatttaattggtatcgttttgatctcttaa 5101482  T

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Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 147 - 187
Target Start/End: Complemental strand, 8685880 - 8685840
Alignment:
Q  147 gtttgagtactttaatttaatttttgttacattttttggtc 187  Q
    |||||||||||||||||||||||| |||||| | |||||||    
T  8685880 gtttgagtactttaatttaattttcgttacactatttggtc 8685840  T

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Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Original strand, 16962847 - 16962895
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtc 126  Q
    ||||||| ||||||||||| ||| ||||||||||||||||| |||||||    
T  16962847 ttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtc 16962895  T

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Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 18458830 - 18458774
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  18458830 ttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 18458774  T

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Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 126
Target Start/End: Complemental strand, 30284280 - 30284232
Alignment:
Q  79 ttaaatgttcttttggtc-cttaggtatttatttggtatcgttttggtc 126  Q
    |||||||||||||||||| |||| |||||||||| |||||| |||||||    
T  30284280 ttaaatgttcttttggtctcttaagtatttatttagtatcgctttggtc 30284232  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 77 - 132
Target Start/End: Complemental strand, 45457161 - 45457105
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaa 132  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||    
T  45457161 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaa 45457105  T

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Target: scaffold0009 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 218218 - 218162
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||| ||||||||||| ||| ||||||| |||||||||||||||||||||||||    
T  218218 ttaaatgctcttttggtcccttaagtatttaattggtatcgttttggtcccttaact 218162  T

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Target: scaffold0220 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0220
Description:

Target: scaffold0220; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 25964 - 26016
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| ||||||||||||||||| |||||||||    
T  25964 gcttaaatgctcttttggtcccttaagtatttatttggtatcgctttggtccc 26016  T

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Target: scaffold0220; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 26329 - 26277
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtccc 128  Q
    ||||||||| ||||||||||| ||| |||||||||| ||||||||||||||||    
T  26329 gcttaaatgatcttttggtcccttaagtatttatttagtatcgttttggtccc 26277  T

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Target: scaffold0259 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 12062 - 12101
Alignment:
Q  95 tccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  12062 tccttaagtatttatttggtatcgctttggtcccttaact 12101  T

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Target: scaffold0150 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 134
Target Start/End: Original strand, 38902 - 38941
Alignment:
Q  95 tccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| ||||||||||||||||| |||||||||||||||    
T  38902 tccttaagtatttatttggtatcgctttggtcccttaact 38941  T

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Target: scaffold0202 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 198
Target Start/End: Complemental strand, 22194 - 22140
Alignment:
Q  144 attgtttgagtactttaatttaatttttgttacattttttggtcccttccgttaa 198  Q
    ||||||||||||||||| ||| || | |||||| | |||||||||||||||||||    
T  22194 attgtttgagtactttatttttatctctgttacctgttttggtcccttccgttaa 22140  T

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Target: scaffold0054 (Bit Score: 31; Significance: 0.00000004; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 57023 - 57081
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| |||||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  57023 gcttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaact 57081  T

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Target: scaffold0054; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 57615 - 57557
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    |||||| |||||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  57615 gcttaattgttcttttggtcccttaactatttaattggtatcgctttggtcccttaact 57557  T

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Target: scaffold0005 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Original strand, 1476 - 1534
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  1476 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 1534  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 77 - 134
Target Start/End: Complemental strand, 283231 - 283173
Alignment:
Q  77 gcttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  283231 gcttaaatgctcttttggtcccttaactatttaattggtatcgctttggtcccttaact 283173  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Complemental strand, 133632 - 133576
Alignment:
Q  79 ttaaatgttcttttggt-ccttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||||||||||| ||||| ||||||| ||||||||| |||||| || |||||    
T  133632 ttaaatgttcttttggtcccttaagtatttaattggtatcgctttggttccataact 133576  T

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Target: scaffold0006 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 79 - 134
Target Start/End: Original strand, 83016 - 83072
Alignment:
Q  79 ttaaatgttcttttggtcc-ttaggtatttatttggtatcgttttggtcccttaact 134  Q
    ||||||||| ||||||||| |||  |||||| ||||||||| |||||||||||||||    
T  83016 ttaaatgttattttggtcccttaactatttaattggtatcgctttggtcccttaact 83072  T

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