View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13985_high_9 (Length: 465)
Name: NF13985_high_9
Description: NF13985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13985_high_9 |
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Alignment Details
Target: chr3 (Bit Score: 92; Significance: 2e-44; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 261 - 380
Target Start/End: Original strand, 3171222 - 3171340
Alignment:
| Q |
261 |
ccttctttttaactacaactaaccatttaatgaggaccttaaaaggccaaaatacagctagtttccttttactttcatttcattgataggaatggacata |
360 |
Q |
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|||||||||||||||||||| |||||| | |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3171222 |
ccttctttttaactacaactcaccattaattgag-accttaaaaggccaaaatacaactagtttccttttactttcatttcattgataggaatggacata |
3171320 |
T |
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| Q |
361 |
actaaaccttctattgaaat |
380 |
Q |
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|||||||||| ||||||||| |
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| T |
3171321 |
actaaaccttttattgaaat |
3171340 |
T |
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