View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13985_low_26 (Length: 271)

Name: NF13985_low_26
Description: NF13985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13985_low_26
NF13985_low_26
[»] chr3 (53 HSPs)
chr3 (124-271)||(36593377-36593523)
chr3 (1-120)||(4015454-4015574)
chr3 (1-120)||(35844320-35844440)
chr3 (1-120)||(48354935-48355055)
chr3 (1-120)||(51213043-51213163)
chr3 (1-120)||(37157702-37157821)
chr3 (8-113)||(29099356-29099462)
chr3 (1-120)||(37203061-37203181)
chr3 (8-133)||(21193587-21193713)
chr3 (1-125)||(11466813-11466938)
chr3 (12-128)||(22446138-22446255)
chr3 (8-120)||(46297831-46297944)
chr3 (1-120)||(22450962-22451082)
chr3 (3-125)||(40552323-40552446)
chr3 (3-120)||(34132929-34133047)
chr3 (1-110)||(40935995-40936105)
chr3 (1-108)||(11357426-11357535)
chr3 (1-125)||(44186563-44186688)
chr3 (1-129)||(45174488-45174619)
chr3 (1-126)||(3655264-3655390)
chr3 (1-127)||(7327544-7327672)
chr3 (4-125)||(26941325-26941447)
chr3 (3-120)||(39282647-39282764)
chr3 (1-125)||(52040984-52041110)
chr3 (39-120)||(33698186-33698263)
chr3 (1-120)||(4761711-4761833)
chr3 (33-120)||(11835706-11835788)
chr3 (13-124)||(32373462-32373572)
chr3 (75-120)||(40640634-40640679)
chr3 (35-120)||(44891501-44891585)
chr3 (33-120)||(47481516-47481603)
chr3 (3-120)||(53229216-53229335)
chr3 (57-120)||(55343403-55343466)
chr3 (2-83)||(2007964-2008046)
chr3 (4-120)||(20373361-20373478)
chr3 (33-122)||(24489057-24489146)
chr3 (75-124)||(38392628-38392677)
chr3 (75-127)||(45879498-45879550)
chr3 (4-117)||(3362249-3362364)
chr3 (33-120)||(54828796-54828882)
chr3 (3-120)||(25579733-25579851)
chr3 (76-121)||(4556542-4556587)
chr3 (75-120)||(47930666-47930711)
chr3 (75-120)||(53811976-53812021)
chr3 (75-120)||(53818509-53818554)
chr3 (68-120)||(29163841-29163893)
chr3 (1-120)||(33378847-33378964)
chr3 (75-120)||(19606914-19606959)
chr3 (75-124)||(23165838-23165887)
chr3 (75-120)||(49359628-49359673)
chr3 (39-120)||(54505802-54505883)
chr3 (44-120)||(1089725-1089800)
chr3 (37-109)||(2613895-2613967)
[»] chr1 (53 HSPs)
chr1 (1-120)||(1547286-1547406)
chr1 (1-120)||(15752028-15752148)
chr1 (8-120)||(11742414-11742527)
chr1 (1-112)||(47279196-47279308)
chr1 (1-125)||(2959742-2959867)
chr1 (1-120)||(10182065-10182185)
chr1 (1-120)||(38823213-38823333)
chr1 (8-116)||(21289668-21289784)
chr1 (1-120)||(238570-238689)
chr1 (1-120)||(3309147-3309266)
chr1 (1-120)||(42721038-42721158)
chr1 (1-120)||(16415644-16415765)
chr1 (1-120)||(10922726-10922846)
chr1 (1-120)||(14758040-14758160)
chr1 (1-130)||(47682551-47682680)
chr1 (37-120)||(7079168-7079251)
chr1 (8-120)||(48620636-48620749)
chr1 (3-125)||(18422645-18422768)
chr1 (3-133)||(32267020-32267151)
chr1 (1-118)||(27533037-27533155)
chr1 (3-120)||(34012436-34012554)
chr1 (9-110)||(27267264-27267364)
chr1 (8-120)||(3534931-3535044)
chr1 (1-120)||(19899826-19899946)
chr1 (1-120)||(28769652-28769771)
chr1 (1-120)||(31621610-31621730)
chr1 (1-120)||(33725657-33725777)
chr1 (1-120)||(39393382-39393502)
chr1 (33-120)||(15168088-15168175)
chr1 (1-120)||(37618951-37619073)
chr1 (70-120)||(27227604-27227654)
chr1 (1-86)||(32216088-32216174)
chr1 (1-113)||(28564838-28564951)
chr1 (8-120)||(41926162-41926275)
chr1 (75-120)||(43579245-43579290)
chr1 (1-120)||(8222130-8222247)
chr1 (9-120)||(15382932-15383044)
chr1 (1-120)||(23999346-23999466)
chr1 (1-120)||(30327009-30327129)
chr1 (8-91)||(40884841-40884925)
chr1 (55-126)||(30254851-30254922)
chr1 (78-120)||(4150490-4150532)
chr1 (3-104)||(9903113-9903215)
chr1 (5-126)||(30254417-30254538)
chr1 (75-124)||(42663785-42663834)
chr1 (1-110)||(4330288-4330400)
chr1 (68-120)||(22170753-22170805)
chr1 (6-113)||(37451292-37451400)
chr1 (75-125)||(13876919-13876969)
chr1 (75-117)||(34491509-34491551)
chr1 (78-116)||(47279166-47279204)
chr1 (9-93)||(51128885-51128970)
chr1 (75-127)||(16132471-16132523)
[»] scaffold0002 (3 HSPs)
scaffold0002 (1-127)||(130-257)
scaffold0002 (14-102)||(94458-94547)
scaffold0002 (71-120)||(408702-408751)
[»] chr6 (23 HSPs)
chr6 (3-120)||(8513236-8513354)
chr6 (9-120)||(6088911-6089023)
chr6 (1-125)||(3880000-3880125)
chr6 (12-120)||(4318895-4319004)
chr6 (9-120)||(7235103-7235215)
chr6 (1-120)||(21017173-21017293)
chr6 (9-120)||(29182166-29182278)
chr6 (1-120)||(20768089-20768207)
chr6 (1-116)||(18498440-18498557)
chr6 (1-120)||(5627394-5627514)
chr6 (9-120)||(30353427-30353539)
chr6 (1-107)||(15491631-15491738)
chr6 (37-120)||(33893100-33893183)
chr6 (1-120)||(1945836-1945957)
chr6 (1-120)||(33618837-33618957)
chr6 (1-123)||(6091244-6091366)
chr6 (1-125)||(7055276-7055401)
chr6 (75-120)||(11084152-11084197)
chr6 (75-120)||(19631752-19631797)
chr6 (78-126)||(25440955-25441003)
chr6 (74-120)||(24662189-24662235)
chr6 (75-120)||(3005393-3005438)
chr6 (75-120)||(6614036-6614081)
[»] chr7 (49 HSPs)
chr7 (1-120)||(5657544-5657664)
chr7 (1-120)||(4582897-4583017)
chr7 (1-120)||(26524390-26524510)
chr7 (1-125)||(21991609-21991734)
chr7 (1-120)||(8861263-8861383)
chr7 (33-127)||(31579165-31579259)
chr7 (8-125)||(43686014-43686131)
chr7 (1-120)||(18797307-18797425)
chr7 (1-109)||(22687228-22687337)
chr7 (1-120)||(24211719-24211839)
chr7 (1-120)||(32821116-32821236)
chr7 (8-120)||(12165730-12165843)
chr7 (8-120)||(15612829-15612941)
chr7 (1-120)||(30055504-30055625)
chr7 (1-129)||(41765141-41765270)
chr7 (8-120)||(48928633-48928746)
chr7 (1-120)||(7334772-7334892)
chr7 (1-120)||(29173519-29173638)
chr7 (1-120)||(34362212-34362331)
chr7 (9-120)||(37109850-37109962)
chr7 (33-120)||(17842682-17842769)
chr7 (7-120)||(27421448-27421562)
chr7 (12-120)||(23111168-23111277)
chr7 (1-120)||(37347000-37347120)
chr7 (37-120)||(6546497-6546580)
chr7 (9-127)||(32432428-32432542)
chr7 (3-120)||(9355891-9356009)
chr7 (1-120)||(25691607-25691728)
chr7 (1-120)||(27283722-27283842)
chr7 (9-120)||(33688333-33688444)
chr7 (1-120)||(38258523-38258643)
chr7 (8-107)||(48928366-48928466)
chr7 (57-120)||(8299193-8299256)
chr7 (3-93)||(26980328-26980419)
chr7 (8-120)||(31520793-31520906)
chr7 (33-120)||(12390726-12390813)
chr7 (75-120)||(3953734-3953779)
chr7 (1-120)||(11071183-11071304)
chr7 (75-120)||(23402371-23402416)
chr7 (75-130)||(40381933-40381988)
chr7 (35-84)||(43925120-43925169)
chr7 (9-120)||(10359285-10359397)
chr7 (75-115)||(22955312-22955352)
chr7 (33-120)||(44413475-44413563)
chr7 (33-89)||(44598373-44598429)
chr7 (78-125)||(241024-241071)
chr7 (69-120)||(10675326-10675377)
chr7 (1-91)||(38053493-38053584)
chr7 (75-120)||(8133561-8133606)
[»] chr4 (55 HSPs)
chr4 (1-120)||(55241192-55241312)
chr4 (3-120)||(34948187-34948305)
chr4 (1-120)||(47253752-47253871)
chr4 (1-120)||(7703520-7703640)
chr4 (8-120)||(4597996-4598108)
chr4 (1-120)||(19089541-19089661)
chr4 (1-120)||(36493776-36493896)
chr4 (3-125)||(37287731-37287855)
chr4 (9-120)||(39397921-39398033)
chr4 (33-120)||(34361612-34361699)
chr4 (1-120)||(49375969-49376090)
chr4 (1-120)||(27396619-27396739)
chr4 (13-120)||(37775672-37775780)
chr4 (33-120)||(4205119-4205206)
chr4 (33-120)||(17167716-17167803)
chr4 (33-120)||(17173293-17173380)
chr4 (33-120)||(35021156-35021243)
chr4 (3-120)||(38011857-38011975)
chr4 (1-133)||(25701145-25701278)
chr4 (1-120)||(29584288-29584406)
chr4 (1-120)||(28003074-28003194)
chr4 (1-109)||(50764746-50764853)
chr4 (1-125)||(35025676-35025801)
chr4 (33-125)||(25184111-25184203)
chr4 (9-116)||(30002720-30002828)
chr4 (8-120)||(33341398-33341515)
chr4 (1-120)||(55477979-55478103)
chr4 (3-120)||(19440738-19440857)
chr4 (41-120)||(32912709-32912788)
chr4 (1-125)||(37663829-37663952)
chr4 (33-120)||(4396329-4396416)
chr4 (69-120)||(20097485-20097536)
chr4 (1-106)||(23761089-23761195)
chr4 (33-126)||(879669-879762)
chr4 (75-120)||(38812260-38812305)
chr4 (33-98)||(54499360-54499425)
chr4 (68-120)||(17272014-17272066)
chr4 (68-120)||(52516600-52516652)
chr4 (3-109)||(46888247-46888354)
chr4 (1-122)||(6864036-6864158)
chr4 (1-129)||(9139241-9139368)
chr4 (8-120)||(32592096-32592209)
chr4 (75-120)||(38811816-38811861)
chr4 (33-120)||(3042614-3042701)
chr4 (41-120)||(7152235-7152314)
chr4 (69-120)||(51204582-51204633)
chr4 (39-129)||(42199723-42199813)
chr4 (75-120)||(2704515-2704560)
chr4 (1-86)||(4934290-4934375)
chr4 (9-120)||(33816629-33816741)
chr4 (33-120)||(32579447-32579534)
chr4 (74-120)||(47073656-47073702)
chr4 (38-120)||(53124290-53124372)
chr4 (75-120)||(2266856-2266901)
chr4 (75-120)||(33255502-33255547)
[»] chr5 (51 HSPs)
chr5 (1-120)||(36860426-36860546)
chr5 (1-125)||(39572817-39572942)
chr5 (8-120)||(36866765-36866878)
chr5 (1-120)||(5112365-5112485)
chr5 (1-120)||(7693233-7693353)
chr5 (1-120)||(19119862-19119982)
chr5 (3-120)||(699153-699271)
chr5 (3-120)||(40133388-40133506)
chr5 (9-120)||(8741946-8742059)
chr5 (1-125)||(9200231-9200356)
chr5 (9-120)||(5837558-5837670)
chr5 (9-120)||(14409386-14409498)
chr5 (1-120)||(26268077-26268197)
chr5 (33-120)||(15724493-15724580)
chr5 (33-120)||(25501011-25501098)
chr5 (1-111)||(33908245-33908356)
chr5 (1-109)||(30969376-30969485)
chr5 (33-120)||(27318572-27318659)
chr5 (1-120)||(12910353-12910478)
chr5 (1-129)||(27330300-27330427)
chr5 (9-125)||(1429205-1429322)
chr5 (8-120)||(32563152-32563265)
chr5 (33-117)||(22019638-22019722)
chr5 (1-120)||(22980796-22980916)
chr5 (1-120)||(31786698-31786818)
chr5 (1-120)||(35826535-35826655)
chr5 (46-120)||(16004474-16004549)
chr5 (1-120)||(24886105-24886227)
chr5 (40-130)||(8466738-8466828)
chr5 (33-129)||(13956430-13956526)
chr5 (37-125)||(35933900-35933988)
chr5 (9-120)||(38528296-38528408)
chr5 (3-116)||(22255188-22255303)
chr5 (33-120)||(22974167-22974254)
chr5 (1-120)||(21088818-21088938)
chr5 (10-120)||(23116283-23116394)
chr5 (69-127)||(13380491-13380549)
chr5 (38-120)||(26317774-26317856)
chr5 (3-120)||(35511531-35511649)
chr5 (1-120)||(14919580-14919701)
chr5 (75-120)||(22616497-22616542)
chr5 (4-119)||(8436970-8437086)
chr5 (1-120)||(11898005-11898125)
chr5 (8-86)||(25668687-25668765)
chr5 (41-120)||(31705704-31705783)
chr5 (12-84)||(28416590-28416663)
chr5 (1-114)||(43308704-43308818)
chr5 (75-125)||(36055874-36055924)
chr5 (75-120)||(10237417-10237462)
chr5 (10-65)||(23954850-23954907)
chr5 (33-81)||(42342775-42342823)
[»] chr8 (41 HSPs)
chr8 (1-134)||(12876097-12876231)
chr8 (1-129)||(36695034-36695163)
chr8 (9-120)||(40862421-40862534)
chr8 (1-131)||(27082906-27083037)
chr8 (1-120)||(1204929-1205049)
chr8 (1-120)||(6098586-6098706)
chr8 (1-120)||(13307625-13307745)
chr8 (1-117)||(37970587-37970704)
chr8 (1-120)||(10555270-10555390)
chr8 (9-120)||(38643980-38644092)
chr8 (1-116)||(23854499-23854615)
chr8 (3-120)||(9864150-9864268)
chr8 (3-120)||(34894969-34895087)
chr8 (8-125)||(34952106-34952224)
chr8 (8-120)||(465844-465957)
chr8 (33-126)||(16446976-16447069)
chr8 (1-120)||(5300014-5300134)
chr8 (33-120)||(33906226-33906313)
chr8 (1-126)||(1150173-1150299)
chr8 (1-120)||(16222865-16222985)
chr8 (33-125)||(30654684-30654776)
chr8 (3-109)||(11727037-11727144)
chr8 (33-120)||(43643696-43643783)
chr8 (1-133)||(41362507-41362637)
chr8 (1-120)||(4133078-4133196)
chr8 (68-120)||(7891084-7891136)
chr8 (68-120)||(15009244-15009296)
chr8 (57-120)||(35459823-35459886)
chr8 (38-120)||(24823378-24823460)
chr8 (9-120)||(31933962-31934074)
chr8 (68-120)||(33197894-33197946)
chr8 (37-125)||(8803915-8803999)
chr8 (78-120)||(6446709-6446751)
chr8 (83-125)||(7998360-7998402)
chr8 (75-124)||(5018009-5018058)
chr8 (75-120)||(35735984-35736029)
chr8 (68-120)||(44869498-44869550)
chr8 (85-120)||(39099262-39099297)
chr8 (75-117)||(23176763-23176805)
chr8 (75-120)||(28220955-28221000)
chr8 (40-120)||(41911097-41911176)
[»] chr2 (44 HSPs)
chr2 (1-120)||(4166925-4167045)
chr2 (1-125)||(19424708-19424833)
chr2 (1-120)||(36641989-36642109)
chr2 (8-120)||(43770926-43771038)
chr2 (1-120)||(31570814-31570934)
chr2 (1-120)||(33660448-33660568)
chr2 (1-120)||(41463930-41464050)
chr2 (9-125)||(4264165-4264282)
chr2 (8-120)||(13711467-13711580)
chr2 (1-120)||(33551066-33551186)
chr2 (38-120)||(18494386-18494468)
chr2 (7-120)||(19313855-19313969)
chr2 (1-120)||(2325450-2325570)
chr2 (1-120)||(3176942-3177062)
chr2 (8-126)||(27350025-27350145)
chr2 (1-120)||(29242218-29242338)
chr2 (10-120)||(26357580-26357691)
chr2 (68-120)||(41465512-41465564)
chr2 (1-120)||(4478371-4478492)
chr2 (1-120)||(4763631-4763754)
chr2 (5-120)||(33902071-33902185)
chr2 (1-120)||(37905712-37905831)
chr2 (1-120)||(39167443-39167563)
chr2 (37-120)||(44913665-44913747)
chr2 (44-130)||(17054220-17054306)
chr2 (68-130)||(17071885-17071947)
chr2 (75-119)||(18947598-18947642)
chr2 (33-120)||(35958912-35958999)
chr2 (44-125)||(11366505-11366586)
chr2 (1-91)||(33709312-33709403)
chr2 (76-127)||(43446463-43446514)
chr2 (75-120)||(6177778-6177823)
chr2 (75-120)||(19093416-19093461)
chr2 (75-120)||(31861898-31861943)
chr2 (75-120)||(41643875-41643920)
chr2 (1-120)||(44285952-44286072)
chr2 (1-86)||(43648325-43648411)
chr2 (81-126)||(7007051-7007096)
chr2 (75-120)||(17245110-17245155)
chr2 (75-120)||(22963403-22963448)
chr2 (75-120)||(22998029-22998074)
chr2 (75-120)||(34441921-34441966)
chr2 (75-120)||(42005392-42005437)
chr2 (68-120)||(41960886-41960938)
[»] scaffold0009 (2 HSPs)
scaffold0009 (37-127)||(42344-42434)
scaffold0009 (68-120)||(100824-100876)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-120)||(7890-8010)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-120)||(43960-44080)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-120)||(154707-154827)
[»] scaffold0318 (1 HSPs)
scaffold0318 (40-120)||(11909-11990)
[»] scaffold0022 (1 HSPs)
scaffold0022 (39-120)||(146117-146198)
[»] scaffold0262 (1 HSPs)
scaffold0262 (74-120)||(12137-12183)


Alignment Details
Target: chr3 (Bit Score: 104; Significance: 6e-52; HSPs: 53)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 124 - 271
Target Start/End: Original strand, 36593377 - 36593523
Alignment:
Q  124 taaattttattcattcataaaccccattttgtccaacctctttcttcatacaaattaccaaaacatgaaaaagaaacatagactaatgttcctctcaaca 223  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36593377 taaattttattcattcataa-ccccattttgtccaacctctttcttcatacaaattaccaaaacatgaaaaagaaacatagactaatgttcctctcaaca 36593475  T
Q  224 atnnnnnnnnnnnntagatcactaatgtttttcattaaacttaataac 271  Q
    ||            ||||||||||||||||||||||||||||||||||    
T  36593476 ataaaaaataaaaatagatcactaatgtttttcattaaacttaataac 36593523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4015574 - 4015454
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  ||  || ||||||| ||||||||||||||||| |||| ||  |||||||||||||||| ||||||||| |||||    
T  4015574 actatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaacttcatcagaaaagtcattct 4015475  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  4015474 catgacttcaccatagaattt 4015454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 35844440 - 35844320
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||||| |||||||||||  || ||| |||||||| |||||||||||||||||||||  |  |||||||||||||||||||||||||| ||| |    
T  35844440 actatggggactaaacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaacttcaccagaaaagtcattat 35844341  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  35844340 catgacttcaccatagaattt 35844320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 48355055 - 48354935
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||| |||||||||||||||| |  ||| ||||| ||||||||||||||  |||||||| ||| ||||||||||||||||||| |||| | |||||    
T  48355055 actatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaacttcaccataaaaatcattct 48354956  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  48354955 catgacttcaccatagaattt 48354935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 51213043 - 51213163
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||| |||||||||||| |  ||| ||||||||||||||| ||||  |||||||||||  || |||||||||||||||| |||||| |||||    
T  51213043 actatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaacttcaccaaaaaagtcattct 51213142  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  51213143 catgacttcaccatagaattt 51213163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37157821 - 37157702
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctc 100  Q
    ||||||| ||||||||||||||||| || ||| |||||||||||||||||||| ||| |||| ||  |||||||||||||||| || |||||  ||| ||    
T  37157821 actatgatgactgaacttttgatgccactgtacaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagccattttc 37157722  T
Q  101 atgacttcaccatagaattt 120  Q
    ||||||||||||||||||||    
T  37157721 atgacttcaccatagaattt 37157702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 29099462 - 29099356
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||| ||||  || ||| ||||||||||||||||||||| |||||||||||  |||||||||||||||||||||||||| ||||| ||||||    
T  29099462 ggactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaacttcaccagaaaagtcattctaatgact 29099363  T
Q  107 tcaccat 113  Q
    |||||||    
T  29099362 tcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37203181 - 37203061
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| || ||| ||||||||||||||||||||| ||| |||| ||  |||||||||||||||| || |||| | ||| |    
T  37203181 actatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaaatcatttt 37203082  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  37203081 tatgacttcaccatagaattt 37203061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 133
Target Start/End: Complemental strand, 21193713 - 21193587
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  ||  || ||||||||||||||||||||||||| |||| ||   | ||||||||||||||||||||||| ||||||||||||    
T  21193713 ggactgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacagtgttaacttcaccagaaaagtcattctcatgact 21193614  T
Q  107 tcaccatagaatttccctaaattttat 133  Q
    | |||||||||||| ||| | ||||||    
T  21193613 ttaccatagaattttccttatttttat 21193587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 11466938 - 11466813
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||||| |||||||||||| || ||| ||||||||||||||||||||||||| ||   ||  |||||| ||||||||| ||||||||| |||||    
T  11466938 actatggggactaaacttttgatgccactgtacaaacagtggggtgttactcacaacacttgcgatgttatagtcttaacttcatcagaaaagtcattct 11466839  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    || |||||||||||||||||| ||||    
T  11466838 caagacttcaccatagaattttccta 11466813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 128
Target Start/End: Original strand, 22446138 - 22446255
Alignment:
Q  12 tgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattctcatgacttcac 110  Q
    |||||||||||||| || ||| || ||||||||||||||||| | |||||| || ||||| ||||||||||||| | |||||| ||| ||||||||||||    
T  22446138 tgaacttttgatgccactgtacaaaagtggggtgttactcactatatttttgatgatataatgttaacttcaccaaaaaaagtcattttcatgacttcac 22446237  T
Q  111 catagaatttccctaaat 128  Q
    | ||||||||||||||||    
T  22446238 cgtagaatttccctaaat 22446255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 46297831 - 46297944
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    ||||||||||||||| || |  ||| ||||||||| ||||||||||| | |||||| ||  |||||||||||||||||||||||||| ||| ||||||||    
T  46297831 ggactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcaccagaaaagtcattttcatgact 46297930  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  46297931 tcaccatagaattt 46297944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22451082 - 22450962
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||| ||  || |||||||| |||| ||||||| ||| |||| ||  ||||||||| |||||||||||||| | |||||    
T  22451082 actatggggactgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcattct 22450983  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  22450982 catgacttcaccatagaattt 22450962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 3 - 125
Target Start/End: Original strand, 40552323 - 40552446
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||||||||||||||||||||  |  ||| |||| |||| ||||||||||  |||||||| ||  ||||||||||||||| ||| |||||| |||||||    
T  40552323 tatgaggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaacttctccaaaaaagtcattctca 40552422  T
Q  102 tgacttcaccatagaatttcccta 125  Q
    ||||||||||||||||||| ||||    
T  40552423 tgacttcaccatagaattttccta 40552446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 34133047 - 34132929
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||| ||| ||     
T  34133047 tatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcg 34132948  T
Q  102 tgacttcaccatagaattt 120  Q
    ||||||||  |||||||||    
T  34132947 tgacttcattatagaattt 34132929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40936105 - 40935995
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| ||||| || |||||||||| ||||| |||| ||  |||||||||||||||||||||||| | |||||    
T  40936105 actatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagtgttaacttcaccagaaaaatcattct 40936006  T
Q  100 catgacttcac 110  Q
    |||||||||||    
T  40936005 catgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 11357426 - 11357535
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtgggg-tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    ||||||| ||||||||||||||||| || ||| ||||||||||| |||||||||| | | |||| ||  |||||||||||||||||||||||||| ||||    
T  11357426 actatgatgactgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgttaacttcaccagaaaagtcattc 11357525  T
Q  99 tcatgacttc 108  Q
    ||||||||||    
T  11357526 tcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 44186563 - 44186688
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| |||||| |||||||||||||||||| |||| ||  ||||||||||||||||||| |||| | |||||    
T  44186563 actatggggactgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaacttcaccaaaaaaatcattct 44186662  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    |  ||||||| |||||||||| ||||    
T  44186663 ctcgacttcatcatagaattttccta 44186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 45174619 - 45174488
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcaca--acattttttataatatagtgttaacttcaccagaaaagttatt 97  Q
    |||||| |||||||||||||||||| || ||| ||||||||  ||||||||||||  ||| |||| ||  ||||||||||||||||||| ||||||||||    
T  45174619 actatggggactgaacttttgatgctactgtacaaacagtgaagtgttactcacacaacacttttgatgttatagtgttaacttcaccaaaaaagttatt 45174520  T
Q  98 ctcatgacttcaccatagaatttccctaaatt 129  Q
    ||||  ||||||||||| ||||| || |||||    
T  45174519 ctcacaacttcaccataaaattttccaaaatt 45174488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 3655264 - 3655390
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| |||| |||||||||||||||  |||||||||||  |||||||||||||| | || |||||| ||| |    
T  3655264 actatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaactttatcaaaaaagtcatttt 3655363  T
Q  100 catgacttcaccatagaatttccctaa 126  Q
     |||||||||||||| ||||| |||||    
T  3655364 tatgacttcaccataaaattttcctaa 3655390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 7327544 - 7327672
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgtt-aacttcaccagaaaagttattc 98  Q
    |||||| |||||||||||||||||  || ||| ||| | ||| ||||||||||||||| |||| ||  ||||||||| |||||||| | |||||| ||||    
T  7327544 actatggggactgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagtgtttaacttcactaaaaaagtcattc 7327643  T
Q  99 tcatgacttcaccatagaatttccctaaa 127  Q
    |||| ||||||||||||||||| ||||||    
T  7327644 tcataacttcaccatagaattttcctaaa 7327672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 4 - 125
Target Start/End: Original strand, 26941325 - 26941447
Alignment:
Q  4 atgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcat 102  Q
    |||||||||||||||||||||  |   || ||||||||||||||||||||  | | |||| ||  ||||||||||||||||||| |||| | ||||| ||    
T  26941325 atgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaacttcaccaaaaaaatcattcttat 26941424  T
Q  103 gacttcaccatagaatttcccta 125  Q
    |||||||||||||||||| ||||    
T  26941425 gacttcaccatagaattttccta 26941447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 39282764 - 39282647
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||||| |||||||||||||||| || ||| |||||||||||| ||||||||| || |||| ||  ||||||||||| || | ||||||| | ||| |||    
T  39282764 tatgagaactgaacttttgatgccactgtataaacagtggggtattactcaca-cagttttgatgttatagtgttaattttatcagaaaaatcattttca 39282666  T
Q  102 tgacttcaccatagaattt 120  Q
    |||||||||||||||||||    
T  39282665 tgacttcaccatagaattt 39282647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 52040984 - 52041110
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    ||||||| ||||||||||||||||| ||  || ||||| | |||| ||||||||| ||| |||| ||  |||||| ||||||||||||||||||| ||||    
T  52040984 actatgatgactgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatagtattaacttcaccagaaaagtcattc 52041083  T
Q  99 tcatgacttcaccatagaatttcccta 125  Q
    |||||||||||||  ||||||| ||||    
T  52041084 tcatgacttcacctcagaattttccta 52041110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 33698263 - 33698186
Alignment:
Q  39 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||| ||  ||||||||||||||||| ||| |    ||||||||||||||||||||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaattt 33698186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4761711 - 4761833
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc--agaaaagttatt 97  Q
    ||||||||||||||||||||||||  |  ||| ||||||||  ||||||||||  |||||||| ||| |||||| |||||||||||  | |||||| | |    
T  4761711 actatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcaccaaaaaaaagtcaat 4761810  T
Q  98 ctcatgacttcaccatagaattt 120  Q
    ||||||| |||||||||||||||    
T  4761811 ctcatgaattcaccatagaattt 4761833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 11835706 - 11835788
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||| |||||||||||||||| ||||      |||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  11835706 aaacagtgaggtgttactcacaacactttt-----gatagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattt 11835788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 124
Target Start/End: Complemental strand, 32373572 - 32373462
Alignment:
Q  13 gaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcacc 111  Q
    ||||||||||||| || ||| ||||||||| ||  ||||||||||| |||| ||  |||||||||||||| |   ||||||| ||||||||||||||| |    
T  32373572 gaacttttgatgccactgtacaaacagtggagt--tactcacaacacttttgatgctatagtgttaactttattggaaaagtcattctcatgacttcatc 32373475  T
Q  112 atagaatttccct 124  Q
    |||||||||||||    
T  32373474 atagaatttccct 32373462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 40640634 - 40640679
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattt 40640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 35 - 120
Target Start/End: Complemental strand, 44891585 - 44891501
Alignment:
Q  35 acagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||| |||||||||||||| |||| ||  ||||||||||||||||||| |||||| ||| ||||||||||||| || |||||    
T  44891585 acagtgggatgttactcacaacacttttgatgttatagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattt 44891501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 47481603 - 47481516
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| |||  | ||||  |||||||||||||| |||||    
T  47481603 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaacatcattcctatgacttcaccataaaattt 47481516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 53229216 - 53229335
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtg-gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctc 100  Q
    ||||| ||||||||||||||||| || ||| ||||| || ||||||| ||||| ||| |||| ||  ||||||||||| |||||||||||| | ||| ||    
T  53229216 tatgatgactgaacttttgatgcaactgtacaaacattgagggtgttgctcactacacttttgatgctatagtgttaatttcaccagaaaaataattttc 53229315  T
Q  101 atgacttcaccatagaattt 120  Q
    ||||||||||| || |||||    
T  53229316 atgacttcaccttaaaattt 53229335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 55343403 - 55343466
Alignment:
Q  57 attttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||| ||| |||||||||||||||| ||||||||| ||| || |||||||||||||||||||    
T  55343403 atttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattt 55343466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 83
Target Start/End: Complemental strand, 2008046 - 2007964
Alignment:
Q  2 ctatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttca 83  Q
    ||||| ||| |||||||||||||| || ||| ||||||||||||||||||||||||| |||| |   ||||||||||||||||    
T  2008046 ctatggggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttaacgctatagtgttaacttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 4 - 120
Target Start/End: Original strand, 20373361 - 20373478
Alignment:
Q  4 atgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcat 102  Q
    ||||| |||||||||||||||  |  ||| |||||||||||||||||||   |||||||| ||  |||||| |||||||||||| |||| | ||||| ||    
T  20373361 atgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaacttcaccaaaaaaatcattcttat 20373460  T
Q  103 gacttcaccatagaattt 120  Q
    |||||||| ||| |||||    
T  20373461 gacttcactataaaattt 20373478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 122
Target Start/End: Original strand, 24489057 - 24489146
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttcc 122  Q
    |||||||||  ||||||||||||||||||| ||| |||||| |||||||||| | |||| | ||| || |||||||||| |||| |||||    
T  24489057 aaacagtggaatgttactcacaacatttttaatactatagtcttaacttcacaaaaaaaatcattttcgtgacttcaccgtagattttcc 24489146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 38392628 - 38392677
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccct 124  Q
    |||||||||||| |||||| |||||||||||||||||||| |||||||||    
T  38392628 ttaacttcaccaaaaaagtcattctcatgacttcaccatataatttccct 38392677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 127
Target Start/End: Original strand, 45879498 - 45879550
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaa 127  Q
    ||||||| ||||||||||| ||||||||||||||| |||||||||| ||||||    
T  45879498 ttaactttaccagaaaagtcattctcatgacttcagcatagaattttcctaaa 45879550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 117
Target Start/End: Complemental strand, 3362364 - 3362249
Alignment:
Q  4 atgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattctca 101  Q
    ||||||| |||||||||||||| || ||| ||| |||||| |||||||||| | |||| | ||  |||||||||||||||||| | |||||||||| |||    
T  3362364 atgaggagtgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctatagtgttaacttcaccaaaaaaagttattttca 3362265  T
Q  102 tgacttcaccatagaa 117  Q
    | | |||||| |||||    
T  3362264 taatttcaccgtagaa 3362249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 54828796 - 54828882
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| |||||||||||||||  |||||||| ||  |||||||||||||| |||| |||| ||||| | |||||||||||||| |||||    
T  54828796 aaacggtggggtgttactcattacattttt-atgttatagtgttaactttaccaaaaaaattatttttatgacttcaccataaaattt 54828882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 25579851 - 25579733
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| |||||||||||||||||  || ||| ||| ||| |  ||||| |||||||| |||| ||  |||||| ||||||||||||||||| | |||||||    
T  25579851 tatggggactgaacttttgatgtcactgtataaatagtagaatgttattcacaacacttttgatgctatagtattaacttcaccagaaaaatcattctca 25579752  T
Q  102 tgacttcaccatagaattt 120  Q
    | |||| |||||| |||||    
T  25579751 taacttaaccataaaattt 25579733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 76 - 121
Target Start/End: Complemental strand, 4556587 - 4556542
Alignment:
Q  76 taacttcaccagaaaagttattctcatgacttcaccatagaatttc 121  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||    
T  4556587 taacttcacgagaaaagtcattttcatgacttcaccatagaatttc 4556542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 47930666 - 47930711
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| | ||| ||||||||||||||||||||||    
T  47930666 ttaacttcaccagaaaaatcattttcatgacttcaccatagaattt 47930711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 53811976 - 53812021
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||| ||||||||| ||||||||||||||||| ||||||||    
T  53811976 ttaacttcatcagaaaagtcattctcatgacttcaccgtagaattt 53812021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 53818509 - 53818554
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattt 53818554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 29163893 - 29163841
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||| | ||| | |||||||||||||| |||||    
T  29163893 tatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattt 29163841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33378847 - 33378964
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| ||| | ||||||  ||||||| ||| |||| ||| ||||||||| |||||||   |||||| |||||    
T  33378847 actatggggactgaacttttgatgtcaccgtacaaatattggggtactactcactacacttttgatactatagtgttgacttcac---aaaagtcattct 33378943  T
Q  100 catgacttcaccatagaattt 120  Q
    ||| ||||  |||||||||||    
T  33378944 cataactttgccatagaattt 33378964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 19606914 - 19606959
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||| | || |||||||||||||||||    
T  19606914 ttaacttcaccagaaaagtcatttttataacttcaccatagaattt 19606959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 23165838 - 23165887
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccct 124  Q
    |||||||||| | |||| | ||| ||||||||||||||||||||||||||    
T  23165838 ttaacttcactaaaaaaatcattatcatgacttcaccatagaatttccct 23165887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 49359628 - 49359673
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| | |||||| ||| ||||||||||||||||||||||    
T  49359628 ttaacttcacaaaaaaagtcattttcatgacttcaccatagaattt 49359673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 39 - 120
Target Start/End: Complemental strand, 54505883 - 54505802
Alignment:
Q  39 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||  |||||||| ||  |||||||||||||||| || |||||| |||||   ||||||| |||| |||||    
T  54505883 tggggtgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtcattcttgcgacttcatcataaaattt 54505802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 120
Target Start/End: Complemental strand, 1089800 - 1089725
Alignment:
Q  44 tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||||| ||| |||| | ||||||| || |||||| | ||| |||| |||||||||||||||||    
T  1089800 tgttactcactacatttttgatactataatattaactttactagaaaaatcattatcat-acttcaccatagaattt 1089725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 37 - 109
Target Start/End: Complemental strand, 2613967 - 2613895
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttca 109  Q
    |||| |||||||||||||||| ||||  |  |||||||||||||||| || |||||| ||| | |||||||||    
T  2613967 agtgtggtgttactcacaacacttttggtgttatagtgttaacttcaacaaaaaagtcattttaatgacttca 2613895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1547406 - 1547286
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||| |||||||||||||||| || | | ||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||| |||||    
T  1547406 actatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagtcattct 1547307  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  1547306 catgacttcaccatagaattt 1547286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 15752148 - 15752028
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| |  ||| |||||||| |||||||||||| | |||||||||  ||||||||||||||||||| |||||| |||||    
T  15752148 actatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaacttcaccaaaaaagtcattct 15752049  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  15752048 catgacttcaccatagaattt 15752028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 11742414 - 11742527
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| |||||||||||||||||| |||||| |||| |||||||||||||||||||||||||||||| |||||||| |||    
T  11742414 ggactgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagtgttaacttcaccagaaaagtcattctcataact 11742513  T
Q  107 tcaccatagaattt 120  Q
    |||| ||| |||||    
T  11742514 tcacgataaaattt 11742527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 47279308 - 47279196
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||| ||||| || ||| ||||||||||||||||||||||||| |||| ||| |||| |||||||||||||| |||| | |||||    
T  47279308 actatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaacttcaccaaaaaaatcattct 47279209  T
Q  100 catgacttcacca 112  Q
    |||||||||||||    
T  47279208 catgacttcacca 47279196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 2959867 - 2959742
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| |||||||||| ||||||| || ||| |||| ||  |||||||||||||||| ||||||||| ||| |    
T  2959867 actatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaacttcatcagaaaagtcatttt 2959768  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    ||||||||||||||||||||| ||||    
T  2959767 catgacttcaccatagaattttccta 2959742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10182065 - 10182185
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| || ||| ||||||||| ||||||| ||| | |||||||||  || ||| |||||||||||| |||||| ||| |    
T  10182065 actatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaacttcaccaaaaaagtcatttt 10182164  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  10182165 catgacttcaccatagaattt 10182185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38823333 - 38823213
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||| |||||||||||||  || ||| ||| ||||||||||||||| ||||| |||| ||  |||||||||||||| ||||||||||| |||||    
T  38823333 actatggggattgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtgttaacttaaccagaaaagtcattct 38823234  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  38823233 catgacttcaccatagaattt 38823213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 21289784 - 21289668
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataat-------atagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||| ||||||||||| ||       ||||||||||||||||||||||||| |||||    
T  21289784 ggactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatgatatagtgttaacttcaccagaaaagtcattct 21289685  T
Q  100 catgacttcaccataga 116  Q
    ||||||||||| |||||    
T  21289684 catgacttcacaataga 21289668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 238570 - 238689
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  |  ||| |||||||||  ||||||||||||||||||| ||| ||||||||||||||||||| |||||||||| |    
T  238570 actatggggactgaacttttgatgtcattgtacaaacagtgga-tgttactcacaacatttttaatactatagtgttaacttcaccaaaaaagttatttt 238668  T
Q  100 catgacttcaccatagaattt 120  Q
    | ||||||||| |||||||||    
T  238669 cgtgacttcactatagaattt 238689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3309266 - 3309147
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| || |||||||||||| | || ||| |||||||||| |||||||||||||| |||| ||  |||||||||||||| ||||||||||| |||||    
T  3309266 actatgaagattgaacttttgataccactgtacaaacagtggg-tgttactcacaacacttttgatgttatagtgttaactttaccagaaaagtcattct 3309168  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||| ||||||||||||    
T  3309167 catgactttaccatagaattt 3309147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 42721158 - 42721038
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||| |||||||||||||  || ||| ||||||||||||||||||||| | ||||||||| |||||| | ||||||||||| |||| | ||| |    
T  42721158 actatggggattgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaacttcaccaaaaaaatcatttt 42721059  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  42721058 catgacttcaccatagaattt 42721038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16415765 - 16415644
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtg-gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    ||||||| | ||||||||||||||| || ||| ||||| |  ||||||||||||| ||| |||| ||  |||||||||||||||||||||||||| ||||    
T  16415765 actatgatggctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcattc 16415666  T
Q  99 tcatgacttcaccatagaattt 120  Q
    ||||||||||||| ||||||||    
T  16415665 tcatgacttcaccttagaattt 16415644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 10922846 - 10922726
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||  |  ||| |||||||||||| |||||||  |||||||||||  ||||||||||||||||||| |||| | |||||    
T  10922846 actatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcattct 10922747  T
Q  100 catgacttcaccatagaattt 120  Q
    ||||| ||||||||| |||||    
T  10922746 catgatttcaccataaaattt 10922726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 14758160 - 14758040
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||| || ||| ||||||| | ||| ||||||| ||| |||| ||  ||||||||| |||||||||||||||| |||||    
T  14758160 actatggggactgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattct 14758061  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| || |||||    
T  14758060 catgacttcaccgtaaaattt 14758040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 47682551 - 47682680
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaaaa-cagtggg-gtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    |||||||||| |||||||||||| | || ||| || ||||||| |||||||||||||||||||||||  ||  ||||||||||||||| |||||| | ||    
T  47682551 actatgaggaatgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgcta--gtgttaacttcaccaaaaaagtcactc 47682648  T
Q  99 tcatgacttcaccatagaatttccctaaattt 130  Q
    |||||||||||||||| ||||| || ||||||    
T  47682649 tcatgacttcaccataaaattttccaaaattt 47682680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 7079168 - 7079251
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||||| |||| ||| ||||||||||||||||||| |||||| ||| ||||||||| |||||| |||||    
T  7079168 agtggggtgttactcacaacacttttgatattatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaattt 7079251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 48620749 - 48620636
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||  |||| |||||||||||| |||||||| ||| | || |||    
T  48620749 ggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaacttcacaagaaaagtcattttaataact 48620650  T
Q  107 tcaccatagaattt 120  Q
    ||| ||||||||||    
T  48620649 tcaacatagaattt 48620636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 18422768 - 18422645
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||||||||||||||||||||  |  ||| |||| ||||||||||||||   | |||||| ||  ||||||||||||||||||| |||||| ||| | |    
T  18422768 tatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttta 18422669  T
Q  102 tgacttcaccatagaatttcccta 125  Q
    ||||||||||||||||||| ||||    
T  18422668 tgacttcaccatagaattttccta 18422645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 133
Target Start/End: Complemental strand, 32267151 - 32267020
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||||||| |||||||||||||  |  ||| ||||||||||||||||||||  |||||||| ||  |||| |||||||||||| | |||||| ||||| |    
T  32267151 tatgaggagtgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaaaaaagtcattctta 32267052  T
Q  102 tgacttcaccatagaatttccctaaattttat 133  Q
    ||||||||||||| ||||| |||  |||||||    
T  32267051 tgacttcaccataaaattttcctttattttat 32267020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 27533037 - 27533155
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||| |||||||||||||| || ||| ||| |||||| |||||| ||||| | |||| ||  |||||||||||||||||||||||||| |||||    
T  27533037 actatggggattgaacttttgatgccactgtacaaagagtgggttgttacccacaatacttttgatgctatagtgttaacttcaccagaaaagtcattct 27533136  T
Q  100 catgacttcaccatagaat 118  Q
    ||| |||| | ||||||||    
T  27533137 cataactttatcatagaat 27533155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 34012436 - 34012554
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||| ||||||||||||||||| ||  || ||||||||| ||||||||||| ||| | || ||  |||||||||||||||| || ||| || ||| |||    
T  34012436 tatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcataaacgtcattttca 34012535  T
Q  102 tgacttcaccatagaattt 120  Q
    |||||||||||||||||||    
T  34012536 tgacttcaccatagaattt 34012554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 9 - 110
Target Start/End: Original strand, 27267264 - 27267364
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    |||||||||||| |||| || ||| |||||||||||||| |||||| |||||||||||  ||  ||||||||||||||| |||| | |||||||||||||    
T  27267264 gactgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttttatgcta--gtgttaacttcaccaaaaaaatcattctcatgactt 27267361  T
Q  108 cac 110  Q
    |||    
T  27267362 cac 27267364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 3535044 - 3534931
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || | | |||||||  |||||||||||||||| |||| ||  ||||||||||||||||| |||||| | ||||| ||||||    
T  3535044 ggactgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaattaattctaatgact 3534945  T
Q  107 tcaccatagaattt 120  Q
    |||  |||||||||    
T  3534944 tcataatagaattt 3534931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19899826 - 19899946
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||  |||||||||||||| |   || |||||||| ||||||||||   |||||||| ||  ||||||||||||||||||| |||| | ||| |    
T  19899826 actatgagggttgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcattat 19899925  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  19899926 tatgacttcaccatagaattt 19899946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 28769771 - 28769652
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||| |||| |||||||| |  ||| |||| || ||||||||||||  |||||||| ||   |||||||||||||||| | |||||||||| |    
T  28769771 actatgaggaccgaacctttgatgccattgtacaaacggt-gggtgttactcattacatttttgatgtcatagtgttaacttcacaaaaaaagttatttt 28769673  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  28769672 tatgacttcaccatagaattt 28769652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31621610 - 31621730
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||| ||||||||| || ||| ||| || |||||| ||||||  |||  ||| ||  ||||||||| ||||||| |||||||| |||||    
T  31621610 actatggggactgaatttttgatgccaccgtacaaatagcggggtgctactcaatacacctttgatgttatagtgttgacttcactagaaaagtcattct 31621709  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| ||||||||    
T  31621710 catgacttcaccgtagaattt 31621730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33725657 - 33725777
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| ||   | ||| |||||| || ||||||  ||| |||| || |||||| ||| ||||||| |||||||| |||||    
T  33725657 actatgaggactgaacttttgatgccaccaaagaaatagtgggctgctactcaatacacttttgatgatatagcgttgacttcactagaaaagtcattct 33725756  T
Q  100 catgacttcaccatagaattt 120  Q
    | |||||| ||||||||||||    
T  33725757 cttgactttaccatagaattt 33725777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 39393502 - 39393382
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||| | |||||||||||| || ||| ||||| ||  || |||||||||||| |||| ||  ||||||||||||||||  |||||||| |||||    
T  39393502 actatggggattaaacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagtgttaacttcattagaaaagtcattct 39393403  T
Q  100 catgacttcaccatagaattt 120  Q
    ||| |||||||| ||||||||    
T  39393402 cataacttcaccgtagaattt 39393382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 15168175 - 15168088
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||| ||||||| ||| |||| ||  ||||||||| ||||||||||||||   |||||||| ||||||| |||||||||    
T  15168175 aaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattt 15168088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 37618951 - 37619073
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgtt--actcacaacattttttataatatagtgttaacttcaccagaaaagttatt 97  Q
    |||||||| |||||||||||||||  |   || |||||||||||||||  |||||  | |||||| ||  ||||||||||||||||||| |||||| |||    
T  37618951 actatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtgttaacttcaccaaaaaagtcatt 37619050  T
Q  98 ctcatgacttcaccatagaattt 120  Q
    || || |||||||||||||||||    
T  37619051 cttataacttcaccatagaattt 37619073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 70 - 120
Target Start/End: Original strand, 27227604 - 27227654
Alignment:
Q  70 tagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| |||| | ||||||||||||||||||||||||||    
T  27227604 tagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattt 27227654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 86
Target Start/End: Complemental strand, 32216174 - 32216088
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 86  Q
    |||| ||||||||||||||||| || |  ||| ||||||||| ||||||||||| |||||||| ||  |||||||||||||||||||    
T  32216174 actacgaggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttcacca 32216088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 113
Target Start/End: Original strand, 28564838 - 28564951
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| |||||||  |||||||||||  |||||||| ||  |||||||||||||||| || |||| | ||| |    
T  28564838 actatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaacttcatcaaaaaaatcatttt 28564937  T
Q  100 catgacttcaccat 113  Q
    ||| ||||||||||    
T  28564938 cataacttcaccat 28564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 41926275 - 41926162
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    ||||||||||| |||||| || ||| |||||||||| | |||||||| | |||||| ||  |||||| ||||||||| || |||| | ||| |||| |||    
T  41926275 ggactgaacttgtgatgccactgtacaaacagtgggatattactcactatatttttgatgttatagtattaacttcatcaaaaaaatcattttcataact 41926176  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  41926175 tcaccatagaattt 41926162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 43579290 - 43579245
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattt 43579245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8222247 - 8222130
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctc 100  Q
    |||||||| |||||||||||||||| |  ||||  | ||| |||||||||||  |||||||| ||  ||||||||||||||||| | ||| || ||| |     
T  8222247 actatgagaactgaacttttgatgccattgtaa--cggtgtggtgttactcattacatttttgatgttatagtgttaacttcactaaaaaggtcattttt 8222150  T
Q  101 atgacttcaccatagaattt 120  Q
    ||||||||||| ||||||||    
T  8222149 atgacttcaccgtagaattt 8222130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 15383044 - 15382932
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  |  ||| |||| ||||| |||||||||  |||||||| ||  ||||||||||| ||||||| |||||| ||| | || ||||    
T  15383044 gactgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcatttttataactt 15382945  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  15382944 caccatagaattt 15382932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23999466 - 23999346
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||  |   || ||| |||||||||||||||   | |||||||||  | ||||||||||||||||| |||| | |||||    
T  23999466 actatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcaccaaaaaaatcattct 23999367  T
Q  100 catgacttcaccatagaattt 120  Q
     |||||||||||||| |||||    
T  23999366 tatgacttcaccataaaattt 23999346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 30327009 - 30327129
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||||| |  ||| |||| || |||| |||||||  |||||||| ||  ||||||||||| ||||| | |||||| ||| |    
T  30327009 actatgatgactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaaattcacaaaaaaagtcatttt 30327108  T
Q  100 catgacttcaccatagaattt 120  Q
     |||||||||| |||||||||    
T  30327109 tatgacttcactatagaattt 30327129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 40884925 - 40884841
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 91  Q
    |||||||||||||||||| || ||| ||||||||||||| ||||||| ||| |||| ||  ||| ||||| ||||||||||||||    
T  40884925 ggactgaacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgttatggtgttgacttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 55 - 126
Target Start/End: Complemental strand, 30254922 - 30254851
Alignment:
Q  55 acattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaa 126  Q
    |||||||| ||  |||||||||||||||| || |||||| ||| | |||||||||||||||||||| |||||    
T  30254922 acatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcctaa 30254851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 4150490 - 4150532
Alignment:
Q  78 acttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  4150490 acttcaccagaaaagtcattatcatgacttcaccatagaattt 4150532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 104
Target Start/End: Original strand, 9903113 - 9903215
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| ||| |||||||||||||  || ||| |||||| |||||||||||||| ||| |||| ||  |||||||||||||||| || |||||| ||| |||    
T  9903113 tatgtggattgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaacttcatcaaaaaagtcattttca 9903212  T
Q  102 tga 104  Q
    |||    
T  9903213 tga 9903215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 126
Target Start/End: Complemental strand, 30254538 - 30254417
Alignment:
Q  5 tgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatg 103  Q
    ||||||||||||||||||||  |  ||| |||||||| | | |||||||  |||||||| ||  |||| ||||||||||| || |||||| ||||| ||     
T  30254538 tgaggactgaacttttgatgtcattgtacaaacagtgtg-tattactcattacatttttgatgttatattgttaacttcaacaaaaaagtcattcttata 30254440  T
Q  104 acttcaccatagaatttccctaa 126  Q
    ||||||||||||||||| |||||    
T  30254439 acttcaccatagaattttcctaa 30254417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 42663785 - 42663834
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccct 124  Q
    |||||||||| | |||||| ||| ||||||||||||||||||||||||||    
T  42663785 ttaacttcactaaaaaagtcattatcatgacttcaccatagaatttccct 42663834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4330400 - 4330288
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtg-ttaacttcaccagaaaagttatt 97  Q
    ||||||| ||||||||||||||| | || ||| ||||| | |||||||||||||| ||| |||| ||  ||||||| ||| ||||| ||||||||| |||    
T  4330400 actatgatgactgaacttttgatcccactgtacaaacattgggggtgttactcactacacttttgatgctatagtgtttatcttcatcagaaaagtcatt 4330301  T
Q  98 ctcatgacttcac 110  Q
    ||||| |||||||    
T  4330300 ctcataacttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 22170805 - 22170753
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||  |||||||| ||| |||||| |||||||||||||||    
T  22170805 tatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattt 22170753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 113
Target Start/End: Complemental strand, 37451400 - 37451292
Alignment:
Q  6 gaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatga 104  Q
    |||||||||||||||||||  |  ||| |||| || |||||||||| |  |||||||| ||  |||||||||||||| |||| |||||| ||| | ||||    
T  37451400 gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaactttaccaaaaaagtcatttttatga 37451301  T
Q  105 cttcaccat 113  Q
    |||||||||    
T  37451300 cttcaccat 37451292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 13876919 - 13876969
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    |||||||||||| |||||| ||| |||| ||||||||||||||||| ||||    
T  13876919 ttaacttcaccataaaagtcattttcataacttcaccatagaattttccta 13876969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 34491509 - 34491551
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaa 117  Q
    ||||||||| ||||||| |||||||||| ||||||||||||||    
T  34491509 ttaacttcatcagaaaaattattctcatcacttcaccatagaa 34491551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 116
Target Start/End: Complemental strand, 47279204 - 47279166
Alignment:
Q  78 acttcaccagaaaagttattctcatgacttcaccataga 116  Q
    ||||||||| |||||| ||||||||||||||||||||||    
T  47279204 acttcaccaaaaaagtcattctcatgacttcaccataga 47279166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 93
Target Start/End: Complemental strand, 51128970 - 51128885
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 93  Q
    ||||||||||||||||  |  ||| |||| |||| ||||||||||  |||||||||||  ||||||||||||||||| | ||||||    
T  51128970 gactgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaacttcactaaaaaagt 51128885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 75 - 127
Target Start/End: Complemental strand, 16132523 - 16132471
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaa 127  Q
    |||||||||||| |||||| | |||  ||||||||||||||||||| ||||||    
T  16132523 ttaacttcaccaaaaaagtcaatctattgacttcaccatagaattttcctaaa 16132471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 80; Significance: 1e-37; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 257 - 130
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| |  ||| ||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||||| ||| |    
T  257 actatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcaccagaaaagtcatttt 158  T
Q  100 catgacttcaccatagaatttccctaaa 127  Q
    | ||||||||||||||||||| ||||||    
T  157 cgtgacttcaccatagaattttcctaaa 130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 14 - 102
Target Start/End: Original strand, 94458 - 94547
Alignment:
Q  14 aacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcat 102  Q
    |||||||||||| || ||| ||||||||||||||||||||| ||| |||| ||  |||| ||||||||||| ||||||||| ||| ||||    
T  94458 aacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaacttcatcagaaaagtcattttcat 94547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 71 - 120
Target Start/End: Original strand, 408702 - 408751
Alignment:
Q  71 agtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||| |||| | ||| | ||||||||||||||||||||    
T  408702 agtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattt 408751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 8513354 - 8513236
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| |||||||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||| |||||||    
T  8513354 tatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaacttcaccagaaaagtcattctca 8513255  T
Q  102 tgacttcaccatagaattt 120  Q
    |||||||||||||||||||    
T  8513254 tgacttcaccatagaattt 8513236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 6089023 - 6088911
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||| ||  || ||||||||||| ||||||||||||| |||| ||| |||||||||||||||||||||||| | |||||||||||||    
T  6089023 gactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaacttcaccagaaaaatcattctcatgactt 6088924  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  6088923 caccatagaattt 6088911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 3880000 - 3880125
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||| |||||||||||||  |  ||| ||||||| ||||||||||||||||| |||| ||| |||| ||||||||||||||||||||| |||||    
T  3880000 actatggggattgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcaccagaaaagtcattct 3880099  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    | ||||||||||||||||||| ||||    
T  3880100 cgtgacttcaccatagaattttccta 3880125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 12 - 120
Target Start/End: Original strand, 4318895 - 4319004
Alignment:
Q  12 tgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcac 110  Q
    |||||||||||||  || ||| |||||||||||||||||||| |||| |||| ||  ||||||||||||||||||| |||||| ||||||||||||||||    
T  4318895 tgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcaccaaaaaagtcattctcatgacttcac 4318994  T
Q  111 catagaattt 120  Q
    ||||||||||    
T  4318995 catagaattt 4319004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 7235103 - 7235215
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| ||||||||||||| ||||||| ||| |||| ||  ||||||||| |||||||| ||||||| |||||||| ||||    
T  7235103 gactgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttgacttcaccggaaaagtcattctcataactt 7235202  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  7235203 caccatagaattt 7235215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 21017173 - 21017293
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||| |  ||| ||| | |||||||||||||||||||||||||||| || | |||||||||||||| |||||| ||| |    
T  21017173 actatggggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcaccaaaaaagtcatttt 21017272  T
Q  100 catgacttcaccatagaattt 120  Q
    | |||||||||| || |||||    
T  21017273 cgtgacttcaccgtataattt 21017293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 29182278 - 29182166
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||  |||||||||||||||| ||  ||| | |||||||||||||    
T  29182278 gactgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcatcaataaaatcattctcatgactt 29182179  T
Q  108 caccatagaattt 120  Q
    ||||||| |||||    
T  29182178 caccataaaattt 29182166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 20768207 - 20768089
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctc 100  Q
    ||||||||||||||||||||||||| ||    ||||| |||  || ||||||| ||| |||| ||  ||||||||| |||||||||||||||| ||||||    
T  20768207 actatgaggactgaacttttgatgccactaacaaacaatgga-tgctactcactacacttttgatgctatagtgttgacttcaccagaaaagtcattctc 20768109  T
Q  101 atgacttcaccatagaattt 120  Q
    ||||||||||||||||||||    
T  20768108 atgacttcaccatagaattt 20768089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 18498557 - 18498440
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtgggg-tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    ||||||||||||||||||||||||| || ||| |||| |||||| |||| ||||| ||| |||| ||  |||| ||||||||||||||| ||||| ||||    
T  18498557 actatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaagtcattc 18498458  T
Q  99 tcatgacttcaccataga 116  Q
    |||||||||||| |||||    
T  18498457 tcatgacttcactataga 18498440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 5627514 - 5627394
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||  |   || ||| ||||||||||||||||  | |||||||||  ||||||||||||||||||| |||||| |||||    
T  5627514 actatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcaccaaaaaagtcattct 5627415  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||| ||||||||    
T  5627414 tatgacttcaccttagaattt 5627394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 30353427 - 30353539
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||| | ||||| || ||| |||||||| | | |||||| ||||| |||| ||  |||| ||||||||||||||||||||| |||||||||||||    
T  30353427 gactgaactatcgatgccactgtacaaacagtgagatattactcgcaacacttttgatgttataatgttaacttcaccagaaaagtcattctcatgactt 30353526  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  30353527 caccatagaattt 30353539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15491738 - 15491631
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||| || ||| ||| ||||||||||||||||||||| |||| ||  || | |||||||||||| |||||||| |||||    
T  15491738 actatgagggctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaacttcacgagaaaagtcattct 15491639  T
Q  100 catgactt 107  Q
    ||| ||||    
T  15491638 cataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Original strand, 33893100 - 33893183
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||||| |||| ||  ||||||||||||||||| | |||| ||||||| ||||||| ||||||||||||    
T  33893100 agtggggtgttactcacaacacttttgatgttatagtgttaacttcactaaaaaaattattctaatgactttaccatagaattt 33893183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1945957 - 1945836
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattc 98  Q
    ||||||||| ||||||||||||||  |   || ||||||||||||||||||||  |||||||| ||  |||||||||||||||||| | |||||| ||||    
T  1945957 actatgagggctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaagtcattc 1945858  T
Q  99 tcatgacttcaccatagaattt 120  Q
    | ||||||||||| ||||||||    
T  1945857 ttatgacttcaccgtagaattt 1945836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 33618957 - 33618837
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||| |||||||||||||||| || ||| ||| | |||| || ||||||| ||| |||| ||   |||||||| ||||||||||||||||  |||     
T  33618957 actatgagaactgaacttttgatgccaccgtacaaataatgggttgctactcactacacttttgatgcgatagtgttgacttcaccagaaaagtatttcc 33618858  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| ||||||||    
T  33618857 catgacttcaccgtagaattt 33618837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6091244 - 6091366
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||| ||| |||||||||||||||  |  ||| ||||| ||| ||||||||||| |||||||||||  || | ||||||||| |||| |||| ||||| |    
T  6091244 actacgagtactgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgttaca-tgttaactttaccaaaaaaattatttt 6091342  T
Q  100 catgacttcaccatagaatttccc 123  Q
    ||||||||||| ||||||||||||    
T  6091343 catgacttcacaatagaatttccc 6091366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7055276 - 7055401
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||  |   || ||| |||| ||||||||| |  | |||||||||  ||||||||||||||||||| |||| | |||||    
T  7055276 actatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcaccaaaaaaatcattct 7055375  T
Q  100 catgacttcaccatagaatttcccta 125  Q
     |||||||||||||| ||||| ||||    
T  7055376 tatgacttcaccataaaattttccta 7055401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 11084152 - 11084197
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||| ||||||||||||||| ||||||||||||||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattt 11084197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 19631797 - 19631752
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattt 19631752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 78 - 126
Target Start/End: Complemental strand, 25441003 - 25440955
Alignment:
Q  78 acttcaccagaaaagttattctcatgacttcaccatagaatttccctaa 126  Q
    |||||||||||||||| ||| | | ||||||||||||||||||||||||    
T  25441003 acttcaccagaaaagtcattttaacgacttcaccatagaatttccctaa 25440955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 24662189 - 24662235
Alignment:
Q  74 gttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||| |||||||| ||| ||||||||| ||||||||||||    
T  24662189 gttaacttcactagaaaagtcattatcatgactttaccatagaattt 24662235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 3005393 - 3005438
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||| || |||||| ||||||||||||||| ||||||||||    
T  3005393 ttaacttcatcaaaaaagtcattctcatgacttcaacatagaattt 3005438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 6614036 - 6614081
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||||| |||| ||||||||| |||||    
T  6614036 ttaacttcaccagaaaagtcattcttatgatttcaccatataattt 6614081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5657544 - 5657664
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||||| |||||||| |||||    
T  5657544 actatgaagactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcactagaaaagtcattct 5657643  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  5657644 catgacttcaccatagaattt 5657664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4583017 - 4582897
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  |  ||| ||| |||||||||||||||||||||||||| ||| |||||| ||||||||||||||||||| ||| |    
T  4583017 actatggggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcaccagaaaagtcatttt 4582918  T
Q  100 catgacttcaccatagaattt 120  Q
    | |||||||||||||||||||    
T  4582917 cgtgacttcaccatagaattt 4582897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 26524390 - 26524510
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||| ||||||||||| || | | ||||| ||| |||||| ||||||||||||| ||  |||||||||||| ||||||||||||| |||||    
T  26524390 actatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaacatcaccagaaaagtcattct 26524489  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  26524490 catgacttcaccatagaattt 26524510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 21991734 - 21991609
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| ||||||||||||||||||| ||||| |||| ||  ||||||||||||||||||| |||| | |||||    
T  21991734 actatggggactgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaacttcaccataaaaatcattct 21991635  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    |||||||||||| |||||||| ||||    
T  21991634 catgacttcaccctagaattttccta 21991609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8861383 - 8861263
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||||| |||||||||||| || ||| |||||||||||||||| ||| |||| |||| ||  ||||||||||||||| | |||||||| |||||    
T  8861383 actatggggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaacttcgcgagaaaagtcattct 8861284  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  8861283 catgacttcaccatagaattt 8861263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 33 - 127
Target Start/End: Original strand, 31579165 - 31579259
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaa 127  Q
    ||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| |||| ||||||| |||||||||||||||||||| ||||||    
T  31579165 aaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcctaaa 31579259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 8 - 125
Target Start/End: Complemental strand, 43686131 - 43686014
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||| |  ||| |||||||||| ||||||||||||||||||| ||| ||||||||||||||||||  |||||| ||| || |||||    
T  43686131 ggactgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcacccaaaaagtcattttcgtgact 43686033  T
Q  107 tcaccatagaatttcccta 125  Q
    |||||||||||||| ||||    
T  43686032 tcaccatagaattttccta 43686014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 18797425 - 18797307
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||  |  ||| ||||||||||||||||||||  |||||||||||  ||  ||||||||||||||| |||||| |||||    
T  18797425 actatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgtta--gtgttaacttcaccaaaaaagtcattct 18797328  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  18797327 catgacttcaccatagaattt 18797307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 22687337 - 22687228
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||| | || | | ||||||||| |||||||||||||||||||| ||  |||||||||||||||| ||||||||| |||||    
T  22687337 actatggggactgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatagtgttaacttcatcagaaaagtcattct 22687238  T
Q  100 catgacttca 109  Q
    ||||||||||    
T  22687237 catgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24211839 - 24211719
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||| |   || ||||||| ||||||||||||  |||||||| ||  ||||||||||||||||||| |||||| |||||    
T  24211839 actatgagggctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattct 24211740  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  24211739 tatgacttcaccatagaattt 24211719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 32821116 - 32821236
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||| |||||||||||||||||||| |  ||| ||||||||| ||||||||||| |||||||| ||  |||| |||||||||||||| |||| | ||| |    
T  32821116 actacgaggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcaccaaaaaaatcatttt 32821215  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  32821216 catgacttcaccatagaattt 32821236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 12165843 - 12165730
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    ||||| |||||||||||| || ||| ||||||||||||||||||||||||| |||  ||  |||||||||||||||||||||||||| ||| | | ||||    
T  12165843 ggacttaacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtgttaacttcaccagaaaagtcattttaacgact 12165744  T
Q  107 tcaccatagaattt 120  Q
    ||||| ||||||||    
T  12165743 tcaccgtagaattt 12165730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 15612829 - 15612941
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||| ||  || ||||| |||||||||||||| |||| |||  ||  ||||||||||||||||| ||||| |||||||||||||||    
T  15612829 ggactgaacttttgatgccactctacaaacactggggtgttactcataacactttg-atgttatagtgttaacttcacaagaaacgttattctcatgact 15612927  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  15612928 tcaccatagaattt 15612941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 30055625 - 30055504
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttca-ccagaaaagttattc 98  Q
    ||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  ||| |||| ||| |||||||||||||||| | | |||||| ||||    
T  30055625 actatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaaagtcattc 30055526  T
Q  99 tcatgacttcaccatagaattt 120  Q
    | ||||||||||||||||||||    
T  30055525 ttatgacttcaccatagaattt 30055504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 41765141 - 41765270
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||| ||||||||||| || ||| ||||||||||||| ||||||| ||| |||| ||  |||||| || |||| | ||||||||| |||||    
T  41765141 actatgaggactggacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgctatagtattgactttatcagaaaagtcattct 41765240  T
Q  100 catgacttcaccatagaatttccctaaatt 129  Q
    |||||||||||||| |||||| ||| ||||    
T  41765241 catgacttcaccatggaattttccttaatt 41765270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 48928633 - 48928746
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| ||| ||||||||| ||||||| ||| |||| ||  ||||||||| |||||||||||||||| ||||||||||||    
T  48928633 ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgact 48928732  T
Q  107 tcaccatagaattt 120  Q
    |||||||| |||||    
T  48928733 tcaccataaaattt 48928746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7334892 - 7334772
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||| |||||||||||||||  |  ||| ||||||||||||||||||||  |||| ||||||  |||||||||||||||| || |||||| |||||    
T  7334892 actatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcatcaaaaaagtcattct 7334793  T
Q  100 catgacttcaccatagaattt 120  Q
    || ||||||||| ||||||||    
T  7334792 cacgacttcaccgtagaattt 7334772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 29173638 - 29173519
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||||||||| ||||||||||||||| |||| ||| || ||||||||||||||||||||||| ||||     
T  29173638 actatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatactacagtgttaacttcaccagaaaagtcattca 29173539  T
Q  100 catgacttcaccatagaattt 120  Q
      |||||||| ||||||||||    
T  29173538 tgtgacttca-catagaattt 29173519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 34362212 - 34362331
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||| |||||||||| ||||| || ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||  | |||||||| |||||    
T  34362212 actatgagaactgaacttt-gatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagtcattct 34362310  T
Q  100 catgacttcaccatagaattt 120  Q
    ||| | |||||||||||||||    
T  34362311 cataatttcaccatagaattt 34362331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 37109962 - 37109850
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  |  ||| |||| |||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| ||| | |||||||    
T  37109962 gactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgactt 37109863  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  37109862 caccatagaattt 37109850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 17842682 - 17842769
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| |||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| ||| | ||||||||||||||||||||    
T  17842682 aaacggtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcatttttatgacttcaccatagaattt 17842769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 120
Target Start/End: Original strand, 27421448 - 27421562
Alignment:
Q  7 aggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgac 105  Q
    ||||||||||||||||||  |  ||| ||||||||| ||||||||||||||| |||| ||  ||||||||||||||||||| |||| | ||| ||| |||    
T  27421448 aggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgac 27421547  T
Q  106 ttcaccatagaattt 120  Q
    |||||||||||||||    
T  27421548 ttcaccatagaattt 27421562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 120
Target Start/End: Complemental strand, 23111277 - 23111168
Alignment:
Q  12 tgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcac 110  Q
    |||||||||||||| |  ||| ||| ||||| ||||||||||||| |||||| ||  |||||||||||||||||||||||| | ||| ||||||||||||    
T  23111277 tgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcaccagaaaaatcattttcatgacttcac 23111178  T
Q  111 catagaattt 120  Q
    || |||||||    
T  23111177 cacagaattt 23111168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37347120 - 37347000
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| ||||| ||||||||||||||  | |||||| ||  |||||| |||||||||||| |||| | ||| |    
T  37347120 actatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaacttcaccaaaaaaatcatttt 37347021  T
Q  100 catgacttcaccatagaattt 120  Q
    ||||||||||||||| |||||    
T  37347020 catgacttcaccataaaattt 37347000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 6546580 - 6546497
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||| ||||| |||| ||  ||||||||||||||||| |||||| | ||||| ||||||||||||||||||||    
T  6546580 agtggggtgttactcgcaacacttttgatgctatagtgttaacttcactagaaaaatcattcttatgacttcaccatagaattt 6546497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 9 - 127
Target Start/End: Complemental strand, 32432542 - 32432428
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  |  ||| ||||| ||||||||||||||||||||||||      ||||||||||||||||||||||| | ||| || ||||||    
T  32432542 gactgaacttttgatgtcattgtacaaacaatggggtgttactcacaacattttt-----gatagtgttaacttcaccagaaaaatcattttcgtgactt 32432448  T
Q  108 caccatagaatttccctaaa 127  Q
    ||||||||||||| ||||||    
T  32432447 caccatagaattttcctaaa 32432428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 9355891 - 9356009
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||||| ||| |||||||||||  || ||| |||||||||||| || ||||| |||||||||||  ||||||||||| ||||||| ||  || |||||||    
T  9355891 tatgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctatagtgttaaattcaccaaaatggtcattctca 9355990  T
Q  102 tgacttcaccatagaattt 120  Q
    ||||||||||||| |||||    
T  9355991 tgacttcaccataaaattt 9356009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 25691607 - 25691728
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtg-ttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    ||||| || |||||||| ||||||| || ||| |||||||| |||  |||||||||| | |||| ||  ||||||||||||||||| |||||||| ||||    
T  25691607 actataagaactgaactgttgatgccactgtacaaacagtgaggtaattactcacaatacttttgatgttatagtgttaacttcacgagaaaagtcattc 25691706  T
Q  99 tcatgacttcaccatagaattt 120  Q
    |||||||||||||||| |||||    
T  25691707 tcatgacttcaccataaaattt 25691728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27283842 - 27283722
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||||||||||||||   |  ||| |||| |||||||||||||||  |||||||| ||  ||||||||||||||||||| |||| | ||| |    
T  27283842 actatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaaatcatttt 27283743  T
Q  100 catgacttcaccatagaattt 120  Q
     || |||||||||||||||||    
T  27283742 tataacttcaccatagaattt 27283722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 33688333 - 33688444
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||| || | | ||||||| || ||||||||| |||| |||| ||  |||||||||||||| ||||||||||| |||||||| ||||    
T  33688333 gactgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaactt-accagaaaagtcattctcataactt 33688431  T
Q  108 caccatagaattt 120  Q
    ||||||| |||||    
T  33688432 caccatataattt 33688444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 38258643 - 38258523
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||  |  ||| |||| ||| |||||||||||  |||||||||||  ||||||||||||||||||| |||| | ||| |    
T  38258643 actatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcatttt 38258544  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||| ||||||||    
T  38258543 tatgacttcaccgtagaattt 38258523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 107
Target Start/End: Original strand, 48928366 - 48928466
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| ||| ||||||||| ||||||| ||| |||| ||  ||||||||| |||||||||||||||| ||||||||||||    
T  48928366 ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctcatgact 48928465  T
Q  107 t 107  Q
    |    
T  48928466 t 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 57 - 120
Target Start/End: Complemental strand, 8299256 - 8299193
Alignment:
Q  57 attttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||| ||| |||||||||||||||||||||||||| ||| || |||||||||||||||||||    
T  8299256 atttttgatactatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaattt 8299193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 93
Target Start/End: Complemental strand, 26980419 - 26980328
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagt 93  Q
    |||| |||||||||||||||||| || ||| |||| |||||||||||||||||||| |||| ||  |||| |||||||||||||| ||||||    
T  26980419 tatggggactgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaacttcaccataaaagt 26980328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 31520793 - 31520906
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| ||||| ||| ||||||||||| | |||||| ||  |||||| |||||||||||| |||||| ||| ||||||||    
T  31520793 ggactgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagtcattttcatgact 31520892  T
Q  107 tcaccatagaattt 120  Q
    ||| |||| |||||    
T  31520893 tcatcataaaattt 31520906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 12390726 - 12390813
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||||||  ||| |||| ||  ||||||||||||||||||| ||||||   ||| ||||||||||||||||||||    
T  12390726 aaacagtgggatgttactcattacacttttgatgttatagtgttaacttcaccaaaaaagtcgatctgatgacttcaccatagaattt 12390813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 3953779 - 3953734
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||||||||||||||| ||||||||||    
T  3953779 ttaacttcaccagaaaagtcattctcatgacttcatcatagaattt 3953734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11071304 - 11071183
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagtt-attc 98  Q
    |||||||| |||||||||||||||  || ||| ||||||||| ||||||||| | | |||||| || |||||||  |||||| |||| |||| |  |||     
T  11071304 actatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtactaactttaccaaaaaaatacattt 11071205  T
Q  99 tcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||||||    
T  11071204 tcatgacttcaccatagaattt 11071183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 23402371 - 23402416
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattt 23402416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 75 - 130
Target Start/End: Complemental strand, 40381988 - 40381933
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaattt 130  Q
    ||||||||||||||||||| |||||||| |||||||| |||||||| ||| |||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttccttaattt 40381933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 35 - 84
Target Start/End: Complemental strand, 43925169 - 43925120
Alignment:
Q  35 acagtggggtgttactcacaacattttttataatatagtgttaacttcac 84  Q
    |||||| ||||||||||||||||||||||||| || | ||||||||||||    
T  43925169 acagtgaggtgttactcacaacattttttatactacaatgttaacttcac 43925120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 10359285 - 10359397
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| ||| ||| || |||||||||| ||| |||| ||  ||||   |||| || ||||||||||| ||| |||||||||    
T  10359285 gactgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctataagattaattttaccagaaaagtcattatcatgactt 10359384  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  10359385 caccatagaattt 10359397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 75 - 115
Target Start/End: Original strand, 22955312 - 22955352
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatag 115  Q
    ||||||||||||||||||| |||||||| ||||||||||||    
T  22955312 ttaacttcaccagaaaagtcattctcattacttcaccatag 22955352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 44413475 - 44413563
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttca-ccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||| ||||||||||||||| | |||||| ||  ||||||||||||||||   | |||||| ||| ||||||||| ||||||||||||    
T  44413475 aaacattggggtgttactcactatatttttgatgttatagtgttaacttcattaaaaaaagtcattttcatgactttaccatagaattt 44413563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 33 - 89
Target Start/End: Complemental strand, 44598429 - 44598373
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaa 89  Q
    ||||||| | |||||||||||||||||||| ||| |||||| |||||||||| ||||    
T  44598429 aaacagtagagtgttactcacaacatttttgatattatagtattaacttcacgagaa 44598373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 78 - 125
Target Start/End: Original strand, 241024 - 241071
Alignment:
Q  78 acttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    ||||||||| |||||| ||| |||||||||||||||||||||| ||||    
T  241024 acttcaccaaaaaagtcattttcatgacttcaccatagaattttccta 241071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 10675326 - 10675377
Alignment:
Q  69 atagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| ||||| |||| ||||||||| ||| ||||||||||||||||||||||    
T  10675326 atagggttaatttcatcagaaaagtcattatcatgacttcaccatagaattt 10675377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 38053584 - 38053493
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 91  Q
    |||||||| |||||||||||||||  |  ||| ||||||| |||| |||||||  |||||||||||  |||||| |||||||||||| ||||    
T  38053584 actatgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcaccaaaaaa 38053493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 8133561 - 8133606
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |||||||||||| ||||||||||  ||||||||    
T  8133561 ttaacttcaccaaaaaagttattcttatgacttcacagtagaattt 8133606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 77; Significance: 8e-36; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 55241192 - 55241312
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||| || ||| ||||||||||||||||||| ||||| |||| |||||||||| |||||||||| |||||||| |||||    
T  55241192 actatggggactgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcactagaaaagtcattct 55241291  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  55241292 catgacttcaccatagaattt 55241312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 34948187 - 34948305
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||||||||||||||||||||| ||  || ||||||||||||||||||||||||| |||| ||  ||||||||||||||| |||||||||| |||||||    
T  34948187 tatgaggactgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcgccagaaaagtcattctca 34948286  T
Q  102 tgacttcaccatagaattt 120  Q
    ||||||||||||| |||||    
T  34948287 tgacttcaccataaaattt 34948305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 47253871 - 47253752
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| ||||| |||| |||||||||||||| |||| || |||||||||||||||||||| |||||| |||||    
T  47253871 actatgaggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagtcattct 47253773  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  47253772 catgacttcaccatagaattt 47253752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7703640 - 7703520
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| |||||||||||||||||| |||||| |||| ||  |||||||||||||||||||||||||| |||||    
T  7703640 actatggggactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagtcattct 7703541  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||| | ||||||||||    
T  7703540 catgactttaacatagaattt 7703520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 4598108 - 4597996
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||| |||  ||  |||||||||||||||||||||||||| ||||| ||||||    
T  4598108 ggactgaacttttgatgccactgtacaaacagtggggtgttactcacaacactttg-atgttatagtgttaacttcaccagaaaagtcattctaatgact 4598010  T
Q  107 tcaccatagaattt 120  Q
    |||||||| |||||    
T  4598009 tcaccataaaattt 4597996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 19089541 - 19089661
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |   || ||||||||||||||||||||  ||| |||| ||| |||||||||||||||| || ||||||||||||    
T  19089541 actatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaacttcatcaaaaaagttattct 19089640  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  19089641 tatgacttcaccatagaattt 19089661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 36493776 - 36493896
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| ||||| ||||||||||||||| | |||||| ||  |||||| |||||||||||| |||||||||| |    
T  36493776 actatggggactgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaacttcaccaaaaaagttatttt 36493875  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  36493876 catgacttcaccatagaattt 36493896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 3 - 125
Target Start/End: Complemental strand, 37287855 - 37287731
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattctc 100  Q
    |||||||| |||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||  |||||||||||||| ||| | |||||| ||||||    
T  37287855 tatgaggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagtcattctc 37287756  T
Q  101 atgacttcaccatagaatttcccta 125  Q
    || ||||||||||||||||| ||||    
T  37287755 attacttcaccatagaattttccta 37287731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 39398033 - 39397921
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| ||||| ||||||||||||||||||| |||| ||  ||||||||||||||||||| |||||| ||||| |||||||    
T  39398033 gactgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagtcattctaatgactt 39397934  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  39397933 caccatagaattt 39397921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 34361612 - 34361699
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  34361612 aaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattt 34361699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 49376090 - 49375969
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaaaa-cagtggggtgttactcacaacattttttataatatagtgttaacttcaccag-aaaagttattc 98  Q
    ||||||| ||||||||||||||||| || ||| || |||||||||||||||||| ||| |||| ||  |||| ||||||||||||||| |||||| ||||    
T  49376090 actatgaagactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaacttcaccagaaaaagtcattc 49375991  T
Q  99 tcatgacttcaccatagaattt 120  Q
    ||||||||||||| ||||||||    
T  49375990 tcatgacttcaccgtagaattt 49375969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 27396739 - 27396619
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||  |||||||||||  |  ||| ||||||| |||||||||||| |||| |||| ||  |||| ||||||||||||||||||||| |||||    
T  27396739 actatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaacttcaccagaaaagtcattct 27396640  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  27396639 catgacttcaccatagaattt 27396619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 13 - 120
Target Start/End: Complemental strand, 37775780 - 37775672
Alignment:
Q  13 gaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcacc 111  Q
    ||||||||||||| || ||| |||||||||||||||||||||||||||||| ||| ||||||| ||||||||||| |||| | ||| | |||||||||||    
T  37775780 gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaacttcaccaaaaaaatcattttaatgacttcacc 37775681  T
Q  112 atagaattt 120  Q
     ||||||||    
T  37775680 gtagaattt 37775672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 4205206 - 4205119
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||| ||| ||||||||| ||| |||||||||||||||| ||||||||| ||| || |||||||||||||||||||    
T  4205206 aaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaattt 4205119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 17167803 - 17167716
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  17167803 aaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaattt 17167716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 17173380 - 17173293
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||||||||| ||| |||| ||||||||||| ||||||||| ||| || | |||||||||||||||||    
T  17173380 aaacagtggggtgttactcacaacatttttgatattataatgttaacttcatcagaaaagtcattttcgtaacttcaccatagaattt 17173293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 35021156 - 35021243
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||| ||||||||||| |||||||| ||  |||| ||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  35021156 aaacagtggtgtgttactcactacatttttgatgttataatgttaacttcaccagaaaagtcattttcatgacttcaccatagaattt 35021243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 38011975 - 38011857
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| |||||||||||||||||  || ||| ||||||||||||| || |||| ||| |||| ||  ||||||||| |||||||||||||||| |||||||    
T  38011975 tatggggactgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttgacttcaccagaaaagtcattctca 38011876  T
Q  102 tgacttcaccatagaattt 120  Q
    ||| |||||||||||||||    
T  38011875 tgatttcaccatagaattt 38011857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 25701145 - 25701278
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| ||||||| ||||||||||||| ||| |||| ||  |||| ||||||||| |||| |||||| ||| |    
T  25701145 actatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaactttaccaaaaaagtcattat 25701244  T
Q  100 catgacttcaccatagaatttccctaaattttat 133  Q
    ||||||||||||||| ||||| |||  |||||||    
T  25701245 catgacttcaccataaaattttcctttattttat 25701278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29584288 - 29584406
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||||| |  ||| |||||||| |||||||||||  ||| |||| ||  |||||||||||||||||||||||||| ||||     
T  29584288 actatgaagactgaacttttgatgccattgtacaaacagtgaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcc 29584385  T
Q  100 catgacttcaccatagaattt 120  Q
    || ||||||||||||||||||    
T  29584386 cacgacttcaccatagaattt 29584406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 28003074 - 28003194
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||||  || ||| ||||||||| ||  |||| || ||| |||| ||  ||||||||| |||||||||||||||| |||||    
T  28003074 actatgatgactgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcaccagaaaagtcattct 28003173  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  28003174 catgacttcaccatagaattt 28003194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 50764853 - 50764746
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||  || ||| ||||||||||||||||||||||||| |||| ||    |||||||||||||| || ||||||||||||    
T  50764853 actatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgat--gttagtgttaacttcatcaaaaaagttattct 50764756  T
Q  100 catgacttca 109  Q
    ||||||||||    
T  50764755 catgacttca 50764746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 35025676 - 35025801
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||| |||||||||||||||||||  |  ||| ||||||||||||| ||||||| ||| |||| ||  ||||||||| |||||||||||||| | ||| |    
T  35025676 actacgaggactgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaatcatttt 35025775  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    |||||||||| |||||||||| ||||    
T  35025776 catgacttcagcatagaattttccta 35025801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 125
Target Start/End: Complemental strand, 25184203 - 25184111
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    ||||||| | ||||||||||  |||||||| ||  ||||||||||||||||||| || ||| |||||||||||||||||||||||||| ||||    
T  25184203 aaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattttccta 25184111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 9 - 116
Target Start/End: Original strand, 30002720 - 30002828
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| |||||||| |||||||||||||||| |||| ||  || ||||||||||||||||||||| | ||| | |||||||    
T  30002720 gactgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaatcattttaatgactt 30002819  T
Q  108 caccataga 116  Q
    |||||||||    
T  30002820 caccataga 30002828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 33341515 - 33341398
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacatt----ttttataatatagtgttaacttcaccagaaaagttattctcat 102  Q
    |||||||||||||||||| || ||| ||||||||||||||| ||| ||||| |    ||| || |||||||||||| |||||||||||| | ||||||||    
T  33341515 ggactgaacttttgatgccactgtacaaacagtggggtgttcctcgcaacaatcaattttgatgatatagtgttaatttcaccagaaaaatcattctcat 33341416  T
Q  103 gacttcaccatagaattt 120  Q
    |||||||| |||||||||    
T  33341415 gacttcactatagaattt 33341398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 55477979 - 55478103
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-----aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagtta 95  Q
    ||||||||||||||||||||||||  |  |||     ||||||||| |||||||||   |||||||| ||  ||||||||||||||||||| |||| | |    
T  55477979 actatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatca 55478078  T
Q  96 ttctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||||    
T  55478079 ttctcatgacttcaccatagaattt 55478103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 19440738 - 19440857
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||||||||||||||||||||| |  ||| |||| |||| |||||| |||  |||||||| ||  |||||||||||| |||||| |||||| |||||||    
T  19440738 tatgaggactgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaacatcaccaaaaaagtcattctca 19440837  T
Q  102 tgac-ttcaccatagaattt 120  Q
    |||| |||||||||||||||    
T  19440838 tgactttcaccatagaattt 19440857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 32912709 - 32912788
Alignment:
Q  41 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||  |||||||| ||  ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  32912709 gggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattt 32912788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 37663829 - 37663952
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  ||| |||| ||  ||  |||||||||||| || |||||| |||||    
T  37663829 actatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgtta--gtgttaacttcatcaaaaaagtcattct 37663926  T
Q  100 catgacttcaccatagaatttcccta 125  Q
     |||||||||||||||||||| ||||    
T  37663927 tatgacttcaccatagaattttccta 37663952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 4396416 - 4396329
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| |||||||||||||||  |||||||||||  ||||||||||||||||| | |||||| ||| | |||||||||| |||||||||    
T  4396416 aaacggtggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattt 4396329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 69 - 120
Target Start/End: Original strand, 20097485 - 20097536
Alignment:
Q  69 atagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| |||||||||||||||||||| ||||||||||||||||||||||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaattt 20097536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 23761195 - 23761089
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  ||  || |||||||| |||||||||||||||| |||| ||  |||||||||||||| || |||| ||| |||||    
T  23761195 actatggggactgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaactttacaagaatagtcattct 23761096  T
Q  100 catgact 106  Q
    |||||||    
T  23761095 catgact 23761089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 879669 - 879762
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaa 126  Q
    ||||| || |||||||||||  |||||||| ||  ||||||||| ||||||||| |||| ||||||||||||||||||| || ||||| |||||    
T  879669 aaacaatgaggtgttactcattacatttttgatgttatagtgtttacttcaccaaaaaaattattctcatgacttcaccttaaaattttcctaa 879762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 38812260 - 38812305
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattt 38812305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 33 - 98
Target Start/End: Original strand, 54499360 - 54499425
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattc 98  Q
    |||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||||    
T  54499360 aaacggtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattc 54499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 17272066 - 17272014
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||||| |||| || ||||||||||||||||||    
T  17272066 tatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattt 17272014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 52516652 - 52516600
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| |||||| |||||||||||||||||||| |||||    
T  52516652 tatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaattt 52516600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 109
Target Start/End: Original strand, 46888247 - 46888354
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| ||||||||||||||||||  | ||| ||| |||||||| |||||||| ||| |||| ||  |||||| ||||||||| ||||||||||||| ||     
T  46888247 tatggggactgaacttttgatgccgctgtacaaatagtggggtattactcactacaattttgatgttatagtattaacttcatcagaaaagttattttct 46888346  T
Q  102 tgacttca 109  Q
    ||||||||    
T  46888347 tgacttca 46888354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6864158 - 6864036
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||| ||||||||||| |  ||| ||| ||| || ||||| |||  | |||||| ||  ||||||| ||||||||||| |||||| |||||    
T  6864158 actatgaggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataacttcaccaaaaaagtcattct 6864059  T
Q  100 catgacttcaccatagaatttcc 122  Q
    |||||| |||||||| |||||||    
T  6864058 catgacatcaccatacaatttcc 6864036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 9139368 - 9139241
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||| ||||||||| |||  || ||| |||| |||||||||||||||| |  ||||||||  ||||  ||||||||||||| |||||| | | |    
T  9139368 actatggggattgaactttttatgtcactgtacaaacggtggggtgttactcacta--ttttttatgctataacgttaacttcaccaaaaaagtcaattt 9139271  T
Q  100 catgacttcaccatagaatttccctaaatt 129  Q
    ||||||||||||||||||||| ||| ||||    
T  9139270 catgacttcaccatagaattttccttaatt 9139241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 32592209 - 32592096
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  ||  || ||||||||| ||||||||| ||||| |||| ||| | |||||||||||||| || |||||| ||| | ||||||    
T  32592209 ggactgaacttttgatgtcactatacaaacagtggagtgttactctcaacacttttgatactgtagtgttaacttcatcaaaaaagtcattataatgact 32592110  T
Q  107 tcaccatagaattt 120  Q
    |||| ||| |||||    
T  32592109 tcacaataaaattt 32592096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 38811861 - 38811816
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattt 38811816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 3042701 - 3042614
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| ||||||| |||||||  ||||||| |||  ||||||||||||||||||| |||| | ||| | |||| |||||||||||||||    
T  3042701 aaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgatttcaccatagaattt 3042614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 7152235 - 7152314
Alignment:
Q  41 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||| | | |||| ||  |||| ||||||||| ||||||||||| |||  |||||||||||||||||||||    
T  7152235 gggtgttactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattt 7152314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 69 - 120
Target Start/End: Complemental strand, 51204633 - 51204582
Alignment:
Q  69 atagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| |||||||||||||||||||| ||| | ||||||||||||||||||||    
T  51204633 atagggttaacttcaccagaaaagtcatttttatgacttcaccatagaattt 51204582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 39 - 129
Target Start/End: Complemental strand, 42199813 - 42199723
Alignment:
Q  39 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaatt 129  Q
    |||||| |||||||  |||||||| ||  |||||| |||||||||||| |||| | ||||| |||| ||||||||||| ||| ||||||||    
T  42199813 tggggtattactcattacatttttgatgttatagtattaacttcaccaaaaaaatcattcttatgatttcaccatagatttttcctaaatt 42199723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 2704560 - 2704515
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||| |||||||||||||||| |||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattt 2704515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 4934290 - 4934375
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtgttaacttcacca 86  Q
    |||||||||| |||||||||||||| |  ||| ||||| | |||||||||||||| ||||||||||||   |||||||||||||||||    
T  4934290 actatgaggattgaacttttgatgccagtgtacaaacaatgggggtgttactcactacattttttata--ctagtgttaacttcacca 4934375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 33816629 - 33816741
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||| || ||| ||| |||| |||| ||||||| ||| |||| ||  || | |||| |||||||||||||| | |||||||||||||    
T  33816629 gactgaacttttgatgccaccgtataaatagtgaggtgctactcactacacttttgatgctacaatgttgacttcaccagaaaaatcattctcatgactt 33816728  T
Q  108 caccatagaattt 120  Q
     | |||| |||||    
T  33816729 aagcatataattt 33816741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 32579534 - 32579447
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||| ||||||| |||||||  || |||| ||  |||| |||| |||||||||||||||| |||||||  ||||||||||| |||||    
T  32579534 aaacactggggtgctactcactgcacttttgatgttataatgttgacttcaccagaaaagtcattctcagaacttcaccataaaattt 32579447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 47073656 - 47073702
Alignment:
Q  74 gttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||| |||||| ||| ||||||||| ||||||||||||    
T  47073656 gttaacttcaccaaaaaagtcattatcatgactttaccatagaattt 47073702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 38 - 120
Target Start/End: Complemental strand, 53124372 - 53124290
Alignment:
Q  38 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||  | |||||| ||  ||||||||||||||||||| |||| | ||| | ||||||||| |||| |||||    
T  53124372 gtggggtgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataattt 53124290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 2266856 - 2266901
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||||| ||| |||||||||||||||| |||||    
T  2266856 ttaacttcactagaaaagtcattatcatgacttcaccatataattt 2266901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 33255547 - 33255502
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |||||| |||||| ||||||||||||| |||||    
T  33255547 ttaacttcaccaaaaaagtgattctcgtgacttcaccatataattt 33255502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 73; Significance: 2e-33; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36860546 - 36860426
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | ||| |    
T  36860546 actatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcaccagaaaaatcatttt 36860447  T
Q  100 catgacttcaccatagaattt 120  Q
    | |||||||||||||||||||    
T  36860446 cgtgacttcaccatagaattt 36860426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 39572942 - 39572817
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||| |||||||||||||||  || | | ||||||||| |||||||||||||||||||||||| |||||| ||||||| || |||||||| |||||    
T  39572942 actatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaacttaactagaaaagtcattct 39572843  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    ||||||||||||||||||||| ||||    
T  39572842 catgacttcaccatagaattttccta 39572817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 36866878 - 36866765
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||| |  ||| ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||| | ||| || |||||    
T  36866878 ggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcaccagaaaaatcattttcgtgact 36866779  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  36866778 tcaccatagaattt 36866765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5112365 - 5112485
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||| || ||| ||||||||||||||||||||| | |||||||||  |||||| |||||||||||| |||||| ||| |    
T  5112365 actatggggactgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaacttcaccaaaaaagtcatttt 5112464  T
Q  100 catgacttcaccatagaattt 120  Q
    ||||||||||||||| |||||    
T  5112465 catgacttcaccataaaattt 5112485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 7693353 - 7693233
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||| ||||| |||||||||||||| || ||| |||||||||| |||||||||||||| |||| ||  |||||||||||||||||||||||||| ||| |    
T  7693353 actaagaggattgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagtcatttt 7693254  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  7693253 aatgacttcaccatagaattt 7693233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 19119982 - 19119862
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| ||||||||||||||||||  ||||| |||| ||  ||||||||||||||||||| |||||| |||||    
T  19119982 actatggggactgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagtgttaacttcaccacaaaagtcattct 19119883  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  19119882 catgacttcaccatagaattt 19119862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 699271 - 699153
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||| ||||||||||||||||  || ||| ||||||||||||||||||||| | |||||||||  |||||||||||||||| ||||||||| |||||||    
T  699271 tatgatgactgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaacttcatcagaaaagtcattctca 699172  T
Q  102 tgacttcaccatagaattt 120  Q
    | ||||||||||| |||||    
T  699171 taacttcaccataaaattt 699153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 40133506 - 40133388
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| |||||||||||||||||| |  ||| ||| |||||||||||||||||||||||||| ||| |||| |||||||||||||| |||||| ||| ||     
T  40133506 tatggggactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcaccacaaaagtcattttcg 40133407  T
Q  102 tgacttcaccatagaattt 120  Q
    |||||||||||||||||||    
T  40133406 tgacttcaccatagaattt 40133388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 8741946 - 8742059
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagt-ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    ||||||||||||||||| |  ||| ||||| | |||||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||||||||||||    
T  8741946 gactgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattctcatgact 8742045  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  8742046 tcaccatagaattt 8742059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 9200356 - 9200231
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||| ||||||| |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||  |||||||||||||||||||||||||||||| |    
T  9200356 actaagaggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagttatttt 9200257  T
Q  100 catgacttcaccatagaatttcccta 125  Q
     |||||||||||||| ||||| ||||    
T  9200256 aatgacttcaccataaaattttccta 9200231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 5837670 - 5837558
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||| ||||||||  || ||| ||||||||||||||||||||||||| |||| ||  |||||||||| ||||||||||||||| |||||||||| ||    
T  5837670 gactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaccttcaccagaaaagtcattctcatgaatt 5837571  T
Q  108 caccatagaattt 120  Q
    |||| ||||||||    
T  5837570 caccgtagaattt 5837558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 14409386 - 14409498
Alignment:
Q  9 gactgaacttttgatgcgacagtaa-aacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||| || |||  || ||||||||| ||||||| |||||||| ||  ||||||||| |||||||||||||| | |||||||||||||    
T  14409386 gactgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttatagtgttgacttcaccagaaaaatcattctcatgactt 14409485  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  14409486 caccatagaattt 14409498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 26268197 - 26268077
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||||| |||||||||||  || ||| |||||||||||||||||||| |||| |||| ||  |||||||||||||||||||||||| | |||||    
T  26268197 actatgtggactaaacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaacttcaccagaaaaatcattct 26268098  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||  ||||||||    
T  26268097 catgacttcactgtagaattt 26268077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 15724580 - 15724493
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||||||| | |||| ||  ||||||||||||||||||| |||||| |||||||| |||||||||||||||||    
T  15724580 aaacagtggggtgttactcacaaaacttttgatgttatagtgttaacttcaccaaaaaagtcattctcataacttcaccatagaattt 15724493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 25501011 - 25501098
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||| ||||||| |||||||| |||| ||  |||||||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  25501011 aaacagtgaggtgttattcacaacacttttgatgctatagtgttaactttaccagaaaagtcattctcatgacttcaccatagaattt 25501098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 33908356 - 33908245
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| || ||| ||||||||| ||| ||||||| ||| |||| || |||||||||| |||||||||||||  | |||||    
T  33908356 actatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtgttgacttcaccagaaagttcattct 33908257  T
Q  100 catgacttcacc 111  Q
    ||||||||||||    
T  33908256 catgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 109
Target Start/End: Original strand, 30969376 - 30969485
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||| ||||||||||||||||||||| |||| ||  ||||||||||||||||||||| || | |||||    
T  30969376 actatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagataaatcattct 30969475  T
Q  100 catgacttca 109  Q
    ||||||||||    
T  30969476 catgacttca 30969485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 27318572 - 27318659
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||| ||||||||||| |||||||||||  | |||||||||||||||||||||| | ||||||||||||||||| | ||||||    
T  27318572 aaacagtggtgtgttactcactacattttttatgttttagtgttaacttcaccagaaaaatcattctcatgacttcaccgttgaattt 27318659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 12910478 - 12910353
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta------aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagtt 94  Q
    ||||||||||||||||||||||||  || |||      ||||||||||||||||| ||| | |||||| ||  |||||| |||||||||||| ||||||     
T  12910478 actatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcactatatttttgatgttatagttttaacttcaccaaaaaagtc 12910379  T
Q  95 attctcatgacttcaccatagaattt 120  Q
    ||| ||||||||||||||||||||||    
T  12910378 attttcatgacttcaccatagaattt 12910353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 27330427 - 27330300
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||||| |  ||| |||||||  |||||||||||  ||| |||| ||  |||||||||||||||||||||||||| ||||     
T  27330427 actatgaagactgaacttttgatgccattgtacaaacagtaaggtgttactca--acacttttgatgttatagtgttaacttcaccagaaaagtcattcc 27330330  T
Q  100 catgacttcaccatagaatttccctaaatt 129  Q
    || |||||||||||||||||| ||| ||||    
T  27330329 cacgacttcaccatagaattttccttaatt 27330300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 1429205 - 1429322
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||| ||||||||| |  ||| ||||||||||||||||||||| | |||||| ||  ||||||||||||||||||| || ||| ||| |||||||||    
T  1429205 gactgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaacttcaccaaaagagtcattttcatgactt 1429304  T
Q  108 caccatagaatttcccta 125  Q
    ||||||||| ||| ||||    
T  1429305 caccatagatttttccta 1429322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 32563265 - 32563152
Alignment:
Q  8 ggactgaacttttgatgcgacagtaaa-acagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| | ||||||| ||||||||||||||| |||| ||  |||||||||||||||| ||||||| | ||| | ||||||    
T  32563265 ggactgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaacttcatcagaaaaatcattttaatgact 32563166  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  32563165 tcaccatagaattt 32563152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 117
Target Start/End: Complemental strand, 22019722 - 22019638
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaa 117  Q
    ||||| ||||||||||||||||||| |||| ||  |||||| ||||||||||||||||||| ||||| || ||||||||||||||    
T  22019722 aaacaatggggtgttactcacaacacttttgattctatagttttaacttcaccagaaaagtcattctaataacttcaccatagaa 22019638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 22980916 - 22980796
Alignment:
Q  1 actatgaggactgaacttttgatgcgacag-taaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  |  | | |||||||||||| ||||||||   |||||| ||| |||||||||||||||||||||||||| |||||    
T  22980916 actatggggactgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactatagtgttaacttcaccagaaaagtcattct 22980817  T
Q  100 catgacttcaccatagaattt 120  Q
    ||| |||||| |||| |||||    
T  22980816 cataacttcatcataaaattt 22980796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31786698 - 31786818
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||| || ||| |||||||||||   | ||||| |||||||| ||  ||||||||||||||||||| |||||| |||||    
T  31786698 actatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctatagtgttaacttcaccaaaaaagtcattct 31786797  T
Q  100 catgacttcaccatagaattt 120  Q
    ||  ||||||| |||||||||    
T  31786798 cactacttcactatagaattt 31786818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 35826535 - 35826655
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| ||||| ||  ||||||||||  |||||||| ||  |||||| |||||||||| | |||||| ||| |    
T  35826535 actatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagtcattat 35826634  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  35826635 catgacttcaccatagaattt 35826655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 46 - 120
Target Start/End: Original strand, 16004474 - 16004549
Alignment:
Q  46 ttactcacaacattttttataatatagtgttaacttcaccagaaaagt-tattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| ||  ||||||||||||||||||||||||||  ||||||||||||| ||||||||||||    
T  16004474 ttactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattt 16004549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 24886227 - 24886105
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc--agaaaagttatt 97  Q
    ||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  |||||||| ||  |||||| |||||||||||  | |||||| |||    
T  24886227 actatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaacttcaccaaaaaaaagtcatt 24886128  T
Q  98 ctcatgacttcaccatagaattt 120  Q
    ||||||| ||||||||| |||||    
T  24886127 ctcatgatttcaccataaaattt 24886105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 40 - 130
Target Start/End: Complemental strand, 8466828 - 8466738
Alignment:
Q  40 ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaattt 130  Q
    ||||||||| |||||||| |||| ||  || ||||||||||||||||||||||| ||||||||||| ||| |||||||||| ||| |||||    
T  8466828 ggggtgttattcacaacacttttgatgttacagtgttaacttcaccagaaaagtcattctcatgacctcatcatagaattttccttaattt 8466738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 33 - 129
Target Start/End: Original strand, 13956430 - 13956526
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaatt 129  Q
    |||||||| |||||||||||| ||| |||| ||  ||||||||||||||||  |||||||| ||| ||||||||||||| |||||||| ||| ||||    
T  13956430 aaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttccttaatt 13956526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 37 - 125
Target Start/End: Complemental strand, 35933988 - 35933900
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    |||| |||||||||||||||| |||| ||  |||||||||||||||| || |||| | |||||||||||||||||||| ||||| ||||    
T  35933988 agtgaggtgttactcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttccta 35933900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 38528296 - 38528408
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| ||||| ||||||||||||||  ||| |||| ||  |||||||||||||||| |||||||   ||| |||||||||    
T  38528296 gactgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaacttcatcagaaaaaccattttcatgactt 38528395  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  38528396 caccatagaattt 38528408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 3 - 116
Target Start/End: Complemental strand, 22255303 - 22255188
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacatttttt-ataatatagtgttaacttcaccagaaaagttattctc 100  Q
    |||||| |||||||||||||||| |  ||| |||| |||||||||||||||  ||||||||| ||  |||| |||||||||||||| |||||||||| |     
T  22255303 tatgagaactgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgttaacttcaccaaaaaagttattttt 22255204  T
Q  101 atgacttcaccataga 116  Q
    ||||||||||| ||||    
T  22255203 atgacttcaccgtaga 22255188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 22974167 - 22974254
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||||||  || ||||| ||  ||||||||||||||||||| |||| | |||||||| |||||||||||||||||    
T  22974167 aaacagtgggatgttactcattacttttttgatgttatagtgttaacttcaccaaaaaaatcattctcataacttcaccatagaattt 22974254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 21088818 - 21088938
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacc-agaaaagttattc 98  Q
    |||||| |||||||||||||||||  |  ||| |||||||||||||| ||||||||||||||||||| || ||| ||||||||||| | |||||| |||     
T  21088818 actatggggactgaacttttgatgtcattgtacaaacagtggggtgtcactcacaacattttttatactacagt-ttaacttcaccaaaaaaagtcattt 21088916  T
Q  99 tcatgacttcaccatagaattt 120  Q
    || |||||||| | ||||||||    
T  21088917 tcgtgacttcatcgtagaattt 21088938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 10 - 120
Target Start/End: Original strand, 23116283 - 23116394
Alignment:
Q  10 actgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttc 108  Q
    |||||||||||||| | || ||| ||||||||||||| ||||||| ||| |||| ||  |||| |||||||||||  | |||||| ||| ||||||| ||    
T  23116283 actgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaacttcataaaaaaagtcattttcatgacgtc 23116382  T
Q  109 accatagaattt 120  Q
    ||||||||||||    
T  23116383 accatagaattt 23116394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 69 - 127
Target Start/End: Complemental strand, 13380549 - 13380491
Alignment:
Q  69 atagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaa 127  Q
    |||| ||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||    
T  13380549 atagggttaacttcactagaaaagtcattctcatgacttcaccataaaatttgcctaaa 13380491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 26317774 - 26317856
Alignment:
Q  38 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||   | |||||| ||  ||||||||||||||||||| |||||| ||| ||||||||||| ||||||||||    
T  26317774 gtggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattt 26317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 3 - 120
Target Start/End: Original strand, 35511531 - 35511649
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||| ||||||||||||||||  ||  || ||||||||| ||||||||||| ||| | || ||  |||| ||||||||||| |||||| || ||| |||    
T  35511531 tatgatgactgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaacttcatcagaaacgtcattttca 35511630  T
Q  102 tgacttcaccatagaattt 120  Q
    |||||||||||||| ||||    
T  35511631 tgacttcaccataggattt 35511649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 14919580 - 14919701
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttca-ccagaaaagttattc 98  Q
    ||||||||||||||||||||||||  |   || |||||||| |||||||||||  |||||||| ||  |||| ||||||||||| | | |||| | ||||    
T  14919580 actatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaacttcatcaaaaaaaataattc 14919679  T
Q  99 tcatgacttcaccatagaattt 120  Q
    |||||||||||||||| |||||    
T  14919680 tcatgacttcaccatataattt 14919701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 22616542 - 22616497
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattt 22616497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 119
Target Start/End: Complemental strand, 8437086 - 8436970
Alignment:
Q  4 atgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcat 102  Q
    |||||||||||||||||||||  || ||| ||||| |||| |||||||||| ||| |||  |   ||||||||||| ||||||| |||| | ||||||||    
T  8437086 atgaggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaatcattctcat 8436987  T
Q  103 gacttcaccatagaatt 119  Q
    ||||||||  |||||||    
T  8436986 gacttcacattagaatt 8436970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 11898125 - 11898005
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaaaac-agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||| |||||||||||  || ||| ||| ||| ||||||||||||   || |||| ||  |||| | ||||||| ||||||||||||||| |    
T  11898125 actatgaggactaaacttttgatgtcactgtacaactagtagggtgttactcagtgcacttttgatgctataatattaactttaccagaaaagttattat 11898026  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| || |||||    
T  11898025 catgacttcaccctaaaattt 11898005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 86
Target Start/End: Complemental strand, 25668765 - 25668687
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 86  Q
    |||||||||||||||||| || ||  ||||||||||||||||||||||||| |||| ||  || ||||||||||||||||    
T  25668765 ggactgaacttttgatgccactgttcaaacagtggggtgttactcacaacacttttgatgtta-agtgttaacttcacca 25668687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 41 - 120
Target Start/End: Original strand, 31705704 - 31705783
Alignment:
Q  41 gggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||   |||||||| ||  ||||||||||||||||||| |||| | ||| | ||||||||||||||||||||    
T  31705704 gggtgttactcgttacatttttgatgttatagtgttaacttcaccaaaaaaatcatttttatgacttcaccatagaattt 31705783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 84
Target Start/End: Original strand, 28416590 - 28416663
Alignment:
Q  12 tgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcac 84  Q
    |||||||||||| | || ||| |||||||||| |||||||||||| | |||| ||| |||||||||||||||||    
T  28416590 tgaacttttgattccactgtacaaacagtgggatgttactcacaatacttttgatattatagtgttaacttcac 28416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 43308704 - 43308818
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcac-cagaaaagttattc 98  Q
    ||||||||||||||||||||||||| |  |||  |||||| |||||||| |||  |||||||| ||  |||| ||||||||| ||  | |||||| ||||    
T  43308704 actatgaggactgaacttttgatgccattgtacgaacagt-gggtgttattcattacatttttgatgttataatgttaactttactaaaaaaagtcattc 43308802  T
Q  99 tcatgacttcaccata 114  Q
    ||||||||||||||||    
T  43308803 tcatgacttcaccata 43308818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 125
Target Start/End: Original strand, 36055874 - 36055924
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    |||||||||| |||||||| ||||||||||| |||||||| ||||| ||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttccta 36055924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 10237462 - 10237417
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||||| ||| |||||||||||| |||||||||    
T  10237462 ttaacttcactagaaaagtcattttcatgacttcacaatagaattt 10237417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 65
Target Start/End: Original strand, 23954850 - 23954907
Alignment:
Q  10 actgaacttttgatgcgac-agtaaaa-cagtggggtgttactcacaacattttttat 65  Q
    |||||||||||||||| || ||||||| |||||||||||||||||| | |||||||||    
T  23954850 actgaacttttgatgccactagtaaaaacagtggggtgttactcactatattttttat 23954907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 33 - 81
Target Start/End: Complemental strand, 42342823 - 42342775
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaactt 81  Q
    |||||||||||| ||||||||||||||||| ||  |||||| |||||||    
T  42342823 aaacagtggggtattactcacaacatttttgatgttatagtattaactt 42342775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 12876231 - 12876097
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||||||| |||||||||||||||||||||||||| |||||||||||||||| ||||||||| ||| |    
T  12876231 actatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaacttcatcagaaaagtcatttt 12876132  T
Q  100 catgacttcaccatagaatttccctaaattttatt 134  Q
    | |||||| |||||||||||| || || |||||||    
T  12876131 cgtgacttaaccatagaattttccaaatttttatt 12876097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 36695034 - 36695163
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||| ||| |||||||||||||||| ||||||||| ||| |    
T  36695034 actatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcatcagaaaagtcatttt 36695133  T
Q  100 catgacttcaccatagaatttccctaaatt 129  Q
    | ||||||||||||||||||| ||| ||||    
T  36695134 cctgacttcaccatagaattttccttaatt 36695163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 40862534 - 40862421
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacatttttt-ataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    ||||||||||||||||| |  ||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| || |||||    
T  40862534 gactgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaagttattttcgtgact 40862435  T
Q  107 tcaccatagaattt 120  Q
    |||| |||||||||    
T  40862434 tcactatagaattt 40862421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 27082906 - 27083037
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||||||||||| |||| || | | ||||||||||||||||||||| ||| |||| ||  |||||||||||||||||||||||||| | |||    
T  27082906 actatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatagtgttaacttcaccagaaaagtcagtct 27083005  T
Q  100 catgacttcaccatagaatttccctaaatttt 131  Q
     |||||||||||||||||||| ||||| ||||    
T  27083006 gatgacttcaccatagaattttcctaagtttt 27083037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 1205049 - 1204929
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||||||||  ||||||||||| |||||||||||  |||||||||||||||||||||||||| |||||    
T  1205049 actatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaacttcaccagaaaagtcattct 1204950  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| || |||||    
T  1204949 catgacttcaccgtaaaattt 1204929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 6098586 - 6098706
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| ||||||||||||||||||||| | |||||| ||  |||||| |||||||||||| |||||||||| |    
T  6098586 actatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaacttcaccaaaaaagttatttt 6098685  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  6098686 catgacttcaccatagaattt 6098706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 13307745 - 13307625
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || ||| ||| |||| |||||||||||||||| |||| ||  |||||||||||||||||||||||| | |||||    
T  13307745 actatggggactgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaatcattct 13307646  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  13307645 catgacttcaccatagaattt 13307625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37970587 - 37970704
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||  |  ||| ||||||||||||||||||||  |||||||| ||  ||||||||||||||||||| |||||| |||||    
T  37970587 actatgagggctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcattct 37970686  T
Q  100 catgacttcaccatagaa 117  Q
    ||||||||||||||||||    
T  37970687 catgacttcaccatagaa 37970704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 10555270 - 10555390
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||  |  ||| ||||||||| ||||||||||  |||||||||||  ||||||||||||||||||| |||||| |||||    
T  10555270 actatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattct 10555369  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| ||||||||    
T  10555370 catgacttcaccgtagaattt 10555390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 9 - 120
Target Start/End: Complemental strand, 38644092 - 38643980
Alignment:
Q  9 gactgaacttttgatgcgac-agtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||| || ||  ||||||||||||||||||||||||| |||| ||  |||||||||||||| |||| |||||| |||||||||| ||    
T  38644092 gactgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatagtgttaacttgaccaaaaaagtcattctcatgattt 38643993  T
Q  108 caccatagaattt 120  Q
    |||||||||||||    
T  38643992 caccatagaattt 38643980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 116
Target Start/End: Original strand, 23854499 - 23854615
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  | | ||||||| ||||||||||||  |||||||||||  ||||||||||||||||||| |||||| |||||    
T  23854499 actatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagtcattct 23854598  T
Q  100 catgacttcaccataga 116  Q
    |||||||||||| ||||    
T  23854599 catgacttcaccgtaga 23854615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 9864268 - 9864150
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    |||| |||||||||||||||||  |  ||| |||||||||||||||||||||||||||||| ||| ||||||||||| ||||||| |||||| ||| ||     
T  9864268 tatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcaccaaaaaagtcattttcg 9864169  T
Q  102 tgacttcaccatagaattt 120  Q
    ||||||||  |||||||||    
T  9864168 tgacttcattatagaattt 9864150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 3 - 120
Target Start/End: Complemental strand, 34895087 - 34894969
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||| ||||||||||||||||| ||  || ||||||||| ||||||||||| ||| | || ||  |||||||||||||||| ||||||||| ||| |||    
T  34895087 tatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaacttcatcagaaaagtcattttca 34894988  T
Q  102 tgacttcaccatagaattt 120  Q
    |||||||||||||||||||    
T  34894987 tgacttcaccatagaattt 34894969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 125
Target Start/End: Original strand, 34952106 - 34952224
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||  || ||| |||||||||| |||||||||||||| |||| || ||||||||||||||| ||||||||||| ||| | ||||||    
T  34952106 ggactgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaacttgaccagaaaagtcattttaatgact 34952205  T
Q  107 tcaccatagaatttcccta 125  Q
    | || ||||||||| ||||    
T  34952206 ttactatagaattttccta 34952224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 465957 - 465844
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||| ||||||||| || ||| ||||||||||||||||||||||||| |||| ||  ||| ||||||||||||||| |||||| ||| | ||||||    
T  465957 ggactgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaacttcaccacaaaagtcattttaatgact 465858  T
Q  107 tcaccatagaattt 120  Q
    |||||||| |||||    
T  465857 tcaccataaaattt 465844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 33 - 126
Target Start/End: Original strand, 16446976 - 16447069
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaa 126  Q
    ||||||||||||||||||||| ||| |||| ||  |||||||||||||| | ||||||||| ||| |||||||||||||||||||||| |||||    
T  16446976 aaacagtggggtgttactcactacaattttgatgttatagtgttaactttatcagaaaagtcattttcatgacttcaccatagaattttcctaa 16447069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 5300014 - 5300134
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||| ||||||||||||||||||| || ||| ||||||| | ||| |||| |||||| |||| ||  ||||||||||||||||  | |||||| |||||    
T  5300014 actataaggactgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagtgttaacttcattaaaaaagtcattct 5300113  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  5300114 catgacttcaccatagaattt 5300134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 33906313 - 33906226
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||| ||||||| ||| |||| ||| ||||||||| |||||||||||||||| |||||||| | |||||||||||||||    
T  33906313 aaacagtggggtgctactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattt 33906226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 1150173 - 1150299
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||||     ||| |||||||||| |||||||||  |||||||| ||  ||||| ||||||||||||| |||||| |||||    
T  1150173 actatgatgactgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaacttcaccaaaaaagtcattct 1150272  T
Q  100 catgacttcaccatagaatttccctaa 126  Q
     |||||||||||||||||||| |||||    
T  1150273 tatgacttcaccatagaattttcctaa 1150299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 16222985 - 16222865
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| |||| ||||||   ||||||| | |||||||||  ||||||||||| |||||||||||||| |||||    
T  16222985 actatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcaccagaaaagtcattct 16222886  T
Q  100 catgacttcaccatagaattt 120  Q
    ||||| |||||| ||||||||    
T  16222885 catgatttcaccgtagaattt 16222865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 33 - 125
Target Start/End: Original strand, 30654684 - 30654776
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    ||||||||||||||||||||  |||||||||||  ||||||||||||||||||| |||| | | ||| |||||||||||||| ||||| ||||    
T  30654684 aaacagtggggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaaatcactcttatgacttcaccataaaattttccta 30654776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 11727144 - 11727037
Alignment:
Q  3 tatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctca 101  Q
    ||||||||||||||||||||||| ||  || ||| |||||||||||||| |||||| |||| ||  ||||||||||||||||||| |||| | |||||||    
T  11727144 tatgaggactgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattctca 11727045  T
Q  102 tgacttca 109  Q
    | ||||||    
T  11727044 taacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 120
Target Start/End: Original strand, 43643696 - 43643783
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||| | ||||||||||  |||||||| ||  ||||||||||||||||||| || ||| ||||||||||||||||||||||||||    
T  43643696 aaacagtagagtgttactcattacatttttgatgttatagtgttaacttcaccaaaatagtcattctcatgacttcaccatagaattt 43643783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 41362637 - 41362507
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||| ||||||||||||||  ||  || ||| ||||||||||||||||| ||||||||   |   ||||||||||||||||| |||||| ||| |    
T  41362637 actatgaggtctgaacttttgatgtcactatacaaatagtggggtgttactcactacattttt---atgctagtgttaacttcaccaaaaaagtcatttt 41362541  T
Q  100 catgacttcaccatagaatttccctaaattttat 133  Q
    ||| ||||||||||||||||| || || ||||||    
T  41362540 cataacttcaccatagaattttcccaacttttat 41362507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 4133078 - 4133196
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| || ||| |||||||  ||| |||||||| |  ||||||||  ||  ||||||||||||||| |||||| |||||    
T  4133078 actatgaggactgaacttttgatgccactgtacaaacagtcaggtattactcactatcttttttatgcta--gtgttaacttcaccaaaaaagtcattct 4133175  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||| |||||| |||||    
T  4133176 gatgacttgaccataaaattt 4133196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Original strand, 7891084 - 7891136
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| | |||||| ||||||||||||||||||||||||||    
T  7891084 tatagtgttaacttcacaaaaaaagtcattctcatgacttcaccatagaattt 7891136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 15009296 - 15009244
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| |||||| ||||| ||||||||||||||||||||    
T  15009296 tatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattt 15009244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 120
Target Start/End: Original strand, 35459823 - 35459886
Alignment:
Q  57 attttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||| |||||| ||||||| || | |||||| ||||||||||||||||||||||||||    
T  35459823 attttttatattatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaattt 35459886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 24823378 - 24823460
Alignment:
Q  38 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |  |||| |||| ||| ||||||||||||||||||| |||||| |||||||| |||| ||||||| ||||    
T  24823378 gtggggtgttacacttaacacttttgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattt 24823460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 120
Target Start/End: Original strand, 31933962 - 31934074
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  |  ||| ||| ||||||||||||||||  | |||||| |||  |||||||||||||||||| |||| | |||||||| ||||    
T  31933962 gactgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcaccaaaaaaatcattctcataactt 31934061  T
Q  108 caccatagaattt 120  Q
    |||  ||||||||    
T  31934062 cacgttagaattt 31934074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 33197946 - 33197894
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||| ||||||| | ||||||| ||||||||||||||||||||||||||||    
T  33197946 tatagtattaacttaatcagaaaaattattctcatgacttcaccatagaattt 33197894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 37 - 125
Target Start/End: Original strand, 8803915 - 8803999
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    ||||| ||||||||||  |||||||| ||  ||||||||||||||||||| |||||| ||    |||||||||||||||||||| ||||    
T  8803915 agtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttcaccatagaattttccta 8803999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 78 - 120
Target Start/End: Original strand, 6446709 - 6446751
Alignment:
Q  78 acttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||| ||| ||||||||||||||||||||||    
T  6446709 acttcaccagaaaagtcattatcatgacttcaccatagaattt 6446751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 83 - 125
Target Start/End: Complemental strand, 7998402 - 7998360
Alignment:
Q  83 accagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    ||||||||||| |||||||||||||||||||||||||| ||||    
T  7998402 accagaaaagtcattctcatgacttcaccatagaattttccta 7998360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 124
Target Start/End: Complemental strand, 5018058 - 5018009
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatttccct 124  Q
    |||||||||| | |||||| ||| ||||||||||||||||||||||||||    
T  5018058 ttaacttcactaaaaaagtcattatcatgacttcaccatagaatttccct 5018009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 35735984 - 35736029
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |||||| ||||| ||||||||||||||||||||    
T  35735984 ttaacttcaccaaaaaagtcattctaatgacttcaccatagaattt 35736029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 44869550 - 44869498
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| |||||||||||| || | |||||| ||||||||    
T  44869550 tatagtgttaacttcaccaaaaaagttattcttataatttcaccgtagaattt 44869498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 120
Target Start/End: Original strand, 39099262 - 39099297
Alignment:
Q  85 cagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||| ||||||||||||||||||||||||||    
T  39099262 cagaaaagtcattctcatgacttcaccatagaattt 39099297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 75 - 117
Target Start/End: Original strand, 23176763 - 23176805
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaa 117  Q
    |||||||||||| |||||| ||| |||||||||||||||||||    
T  23176763 ttaacttcaccaaaaaagtcattttcatgacttcaccatagaa 23176805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 28220955 - 28221000
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| ||| ||||||||| | ||||||||||    
T  28220955 ttaacttcaccagaaaagtcattttcatgactttatcatagaattt 28221000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 120
Target Start/End: Original strand, 41911097 - 41911176
Alignment:
Q  40 ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||| ||| |||| || ||||||| |||||||||||| |||| | | | ||||||||||| | ||||||||    
T  41911097 ggggtgttactcacgacacttttgatgatatagtattaacttcaccaaaaaaatca-tatcatgacttcatcgtagaattt 41911176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 69; Significance: 5e-31; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4167045 - 4166925
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||| |  ||| ||||||||||||||||||||||| |||||| ||| |||| ||||||||||||||||||||| ||| |    
T  4167045 actatggggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcaccagaaaagtcatttt 4166946  T
Q  100 catgacttcaccatagaattt 120  Q
    | |||||||||||||||||||    
T  4166945 cgtgacttcaccatagaattt 4166925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 19424708 - 19424833
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||| |||||||||||| ||  || ||||| ||||||||||||||||||| |||| ||  |||||||||||||||||||||||||  |||||    
T  19424708 actatgaggactaaacttttgatgccactatataaacaatggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaagccattct 19424807  T
Q  100 catgacttcaccatagaatttcccta 125  Q
    ||||||||||||||| ||||| ||||    
T  19424808 catgacttcaccataaaattttccta 19424833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 36642109 - 36641989
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  || ||| |||||||| |||||||||| ||||| |||| ||  |||||| |||| |||||||||||||| |||||    
T  36642109 actatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaatttcaccagaaaagtcattct 36642010  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  36642009 catgacttcaccatagaattt 36641989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 8 - 120
Target Start/End: Original strand, 43770926 - 43771038
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    |||||||||||||||||| || ||| ||||||||||||||||||||||||| |||| ||  ||||||||||||||||||| |||| | ||||| ||||||    
T  43770926 ggactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaacttcacca-aaaaatcattctaatgact 43771024  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  43771025 tcaccatagaattt 43771038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 31570814 - 31570934
Alignment:
Q  1 actatgaggactgaacttttgatgcgac-agtaaaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| |||||||||||||||||  || |  |||| |||||||||||||| |||||| |||| ||  ||||||||||| ||||||||||||||||||||    
T  31570814 actatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttacaacacttttaatgttatagtgttaatttcaccagaaaagttattct 31570913  T
Q  100 catgacttcaccatagaattt 120  Q
    ||| |||||||||||||||||    
T  31570914 cataacttcaccatagaattt 31570934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33660448 - 33660568
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||| |||||||||||||||||||| || ||| ||||||| ||||||||||||||||| |||| ||  |||||||||||||| || |||||||| ||| |    
T  33660448 actaagaggactgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaactagaaaagtcatttt 33660547  T
Q  100 catgacttcaccatagaattt 120  Q
     ||||||||||||||||||||    
T  33660548 aatgacttcaccatagaattt 33660568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 41463930 - 41464050
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||| |||||||||||||| || ||| |||||||| |||||||||||||||| |||| ||  |||||| |||||||||||| ||| || |||||    
T  41463930 actatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaacttcaccaaaaatgtcattct 41464029  T
Q  100 catgacttcaccatagaattt 120  Q
    || ||||||||||||||||||    
T  41464030 cacgacttcaccatagaattt 41464050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 9 - 125
Target Start/End: Original strand, 4264165 - 4264282
Alignment:
Q  9 gactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgactt 107  Q
    ||||||||||||||||  || ||| |||||||||| |||||||||||||| |||| ||  |||||||||||||| ||||||||||| ||| | |||||||    
T  4264165 gactgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaactttaccagaaaagtcattatgatgactt 4264264  T
Q  108 caccatagaatttcccta 125  Q
    ||||||||||||| ||||    
T  4264265 caccatagaattttccta 4264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 120
Target Start/End: Complemental strand, 13711580 - 13711467
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgact 106  Q
    ||||| |||||||||||  || ||| |||| |||||||||||||||||||| |||| ||  |||| ||||||||||||||||||||| ||||| ||||||    
T  13711580 ggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctgatgact 13711481  T
Q  107 tcaccatagaattt 120  Q
    ||||||||||||||    
T  13711480 tcaccatagaattt 13711467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 33551066 - 33551186
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||| ||||||||||||  |  ||| ||||||||||||||||||||| |||||||| ||  ||||||||||||||||| | |||||| |||||    
T  33551066 actatgaagaccgaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaacttcactaaaaaagtcattct 33551165  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| ||||||||    
T  33551166 catgacttcaccgtagaattt 33551186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 38 - 120
Target Start/End: Original strand, 18494386 - 18494468
Alignment:
Q  38 gtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||| |||| ||  |||||||||||||||||||||||||| ||| |||||||||||||| |||||||    
T  18494386 gtggggtgttactcacaacacttttgatgctatagtgttaacttcaccagaaaagtcattttcatgacttcaccacagaattt 18494468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 120
Target Start/End: Complemental strand, 19313969 - 19313855
Alignment:
Q  7 aggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgac 105  Q
    ||||||||||||||||||  || ||| ||| |||  |||||||||||||||| |||| ||  |||| ||||||||||||||||||||| ||||| |||||    
T  19313969 aggactgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatgttaacttcaccagaaaagtcattctaatgac 19313870  T
Q  106 ttcaccatagaattt 120  Q
    |||||||||||||||    
T  19313869 ttcaccatagaattt 19313855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 2325450 - 2325570
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||| |  ||| ||||| ||||||||||||||  |||||| | ||  |||| |||||||||||| |||||||| ||||     
T  2325450 actatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagtcattca 2325549  T
Q  100 catgacttcaccatagaattt 120  Q
    ||| |||||||||||||||||    
T  2325550 cataacttcaccatagaattt 2325570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 3177062 - 3176942
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||||||| | |||||||||| ||||||||| ||| |||||| ||||||||| ||||||||| ||| |    
T  3177062 actatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcatcagaaaagtcatttt 3176963  T
Q  100 catgacttcaccatagaattt 120  Q
    | | |||||||||||||||||    
T  3176962 cgtaacttcaccatagaattt 3176942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 8 - 126
Target Start/End: Original strand, 27350025 - 27350145
Alignment:
Q  8 ggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa-gttattctcatgac 105  Q
    |||||||||||||||||  || ||| |||||||| ||||||||||||||||||||| ||  ||||||||||||||||||| ||||  ||||| | |||||    
T  27350025 ggactgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaacttcaccaaaaaatattattttaatgac 27350124  T
Q  106 ttcaccatagaatttccctaa 126  Q
    ||||||||| ||||| |||||    
T  27350125 ttcaccataaaattttcctaa 27350145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 29242218 - 29242338
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||| ||||||||||||||| | || ||| ||||||||||||||||| ||| | |||||||||  |||||| |||||||||||| ||||   ||| |    
T  29242218 actatgaagactgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatagttttaacttcaccaaaaaaaccatttt 29242317  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||||||||||||    
T  29242318 catgacttcaccatagaattt 29242338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 10 - 120
Target Start/End: Complemental strand, 26357691 - 26357580
Alignment:
Q  10 actgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttc 108  Q
    |||||||||||||||  || ||| |||||||||| |||||||||| ||| |||| ||  |||||||||||||||| ||||||||| ||| ||||||||||    
T  26357691 actgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaacttcatcagaaaagtcattttcatgacttc 26357592  T
Q  109 accatagaattt 120  Q
    |||||| |||||    
T  26357591 accataaaattt 26357580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 41465564 - 41465512
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  41465564 tatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattt 41465512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4478492 - 4478371
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||| |||||||||||| || ||| ||||| ||| ||||||||||||||| |||| ||  ||||||||||||||||||| |||  | ||| |    
T  4478492 actatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaatatcatttt 4478393  T
Q  100 c-atgacttcaccatagaattt 120  Q
    | |||||||||| |||||||||    
T  4478392 ctatgacttcactatagaattt 4478371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 4763754 - 4763631
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgtt---aacttcaccagaaaagttat 96  Q
    |||||| | |||||||||||||||  || ||| ||||||||||||||||||||| ||| ||||  | ||||||||||   ||||||| ||||||||| ||    
T  4763754 actatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgttgttaacttcatcagaaaagtcat 4763655  T
Q  97 tctcatgacttcaccatagaattt 120  Q
    | ||||||||||| ||||||||||    
T  4763654 tttcatgacttcatcatagaattt 4763631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 33902185 - 33902071
Alignment:
Q  5 tgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatg 103  Q
    ||||||||||||||||||||  |   || |||||||||||| |||||||| |||||||||||  ||  |||||||||||||||||||||| ||||| | |    
T  33902185 tgaggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgtta--gtgttaacttcaccagaaaagtcattctaacg 33902088  T
Q  104 acttcaccatagaattt 120  Q
    |||||| ||||||||||    
T  33902087 acttcatcatagaattt 33902071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 37905831 - 37905712
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| |||| ||||||||||||||   |||||||||||  ||||||||||||||||||| |||| | ||| |    
T  37905831 actatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaacttcacca-aaaaatcatttt 37905733  T
Q  100 catgacttcaccatagaattt 120  Q
     || |||||||||||||||||    
T  37905732 tataacttcaccatagaattt 37905712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 39167443 - 39167563
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| |||||||| |||||||||||||| | |||| ||| |||  ||||||||||| || |||| | |||||    
T  39167443 actatgaggactgaacttttgatgtcattgtacaaacagtgaggtgttactcacaatacttttgatactattctgttaacttcatcaaaaaaatcattct 39167542  T
Q  100 catgacttcaccatagaattt 120  Q
    | ||||||||||||| |||||    
T  39167543 cgtgacttcaccataaaattt 39167563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 37 - 120
Target Start/End: Complemental strand, 44913747 - 44913665
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||| ||||||||||||||||||||| ||| || ||||||||||||| || |||||| ||| || |||||||||||||||||||    
T  44913747 agtgaggtgttactcacaacatttttgatactacagtgttaacttca-cataaaagtcattttcgtgacttcaccatagaattt 44913665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 44 - 130
Target Start/End: Original strand, 17054220 - 17054306
Alignment:
Q  44 tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaattt 130  Q
    ||||||| || |||||||| ||  |||||| |||||||||||| |||||| |||| ||||||||||||||||||||| |||| ||||    
T  17054220 tgttacttactacatttttgatgttatagtattaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcctacattt 17054306  T

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Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 68 - 130
Target Start/End: Original strand, 17071885 - 17071947
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaattt 130  Q
    ||||||||||||||||||| |||||| |||| ||||||||||||||||||||| |||| ||||    
T  17071885 tatagtgttaacttcaccaaaaaagtcattcgcatgacttcaccatagaattttcctacattt 17071947  T

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Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 75 - 119
Target Start/End: Original strand, 18947598 - 18947642
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaatt 119  Q
    ||||||||||||||||||||||| |||||||||||||||||||||    
T  18947598 ttaacttcaccagaaaagttattttcatgacttcaccatagaatt 18947642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 120
Target Start/End: Complemental strand, 35958999 - 35958912
Alignment:
Q  33 aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||| ||||  |||||||||||  |||||||  |||||||||| |||||| ||| | ||||||||| ||||||||||    
T  35958999 aaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttcatcatagaattt 35958912  T

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Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 11366505 - 11366586
Alignment:
Q  44 tgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttcccta 125  Q
    |||||||||  |||||||| ||  ||||||||||| ||||||| |||||| ||||| |||| ||||||||||||||| ||||    
T  11366505 tgttactcattacatttttgatgttatagtgttaatttcaccaaaaaagtcattcttatgatttcaccatagaattttccta 11366586  T

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Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 33709312 - 33709403
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagtaa-aacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaa 91  Q
    |||||| |||||||||||||||||  || |||  |||||||| ||||||||| ||||| |||| ||  ||||||||||||||||||| ||||    
T  33709312 actatggggactgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtgttaacttcaccataaaa 33709403  T

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Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 76 - 127
Target Start/End: Original strand, 43446463 - 43446514
Alignment:
Q  76 taacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaa 127  Q
    ||||||||||  |||||| |||||||||||||||||||||||||| ||||||    
T  43446463 taacttcaccgaaaaagtcattctcatgacttcaccatagaattttcctaaa 43446514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 6177823 - 6177778
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||||| |||||||||||||| || ||||||||    
T  6177823 ttaacttcaccagaaaagtcattctcatgacttcgccgtagaattt 6177778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 19093461 - 19093416
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||||| | |||||||||||||||||||| |||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattt 19093416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 31861943 - 31861898
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |||||| |||||||| |||||||||||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattt 31861898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 41643920 - 41643875
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |||||| ||| ||||||||||||||||||||||    
T  41643920 ttaacttcaccaaaaaagtcattatcatgacttcaccatagaattt 41643875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 44286072 - 44285952
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||| ||||| |||||||||||| ||  || |||||||| | | || ||| ||||| |||| ||  |||||||||||||||| ||||||| | ||||     
T  44286072 actatgtggactaaacttttgatgccactatacaaacagtgagatattgctcgcaacacttttgatgctatagtgttaacttcatcagaaaaatcattcg 44285973  T
Q  100 catgacttcaccatagaattt 120  Q
    |||||||||||| || |||||    
T  44285972 catgacttcaccgtataattt 44285952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 86
Target Start/End: Original strand, 43648325 - 43648411
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcacca 86  Q
    ||||||| ||||||||||||||||  |   || |||||||| |||||||||||  |||||||| ||  |||||||||||||||||||    
T  43648325 actatgatgactgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaacttcacca 43648411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 81 - 126
Target Start/End: Original strand, 7007051 - 7007096
Alignment:
Q  81 tcaccagaaaagttattctcatgacttcaccatagaatttccctaa 126  Q
    |||||| |||| | |||||||||||||||||||||||||| |||||    
T  7007051 tcaccaaaaaaatcattctcatgacttcaccatagaattttcctaa 7007096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 17245110 - 17245155
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||| ||||||||||| ||||||  ||||||||||||||||||    
T  17245110 ttaactttaccagaaaagtcattctcgcgacttcaccatagaattt 17245155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 22963448 - 22963403
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  22963448 ttaactttaccagaaaagtcattcttatgacttcaccataaaattt 22963403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 22998029 - 22998074
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||| ||||||||||| ||||| |||||||||||||| |||||    
T  22998029 ttaactttaccagaaaagtcattcttatgacttcaccataaaattt 22998074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Original strand, 34441921 - 34441966
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||| |||| |||||| ||| ||||||||||||||||||||||    
T  34441921 ttaactttaccaaaaaagtcattttcatgacttcaccatagaattt 34441966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 75 - 120
Target Start/End: Complemental strand, 42005437 - 42005392
Alignment:
Q  75 ttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||| |||| | ||| ||||||||||||||||||||||    
T  42005437 ttaacttcaccaaaaaaatcattttcatgacttcaccatagaattt 42005392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 41960938 - 41960886
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||| || |||||| |||   ||||||||||||||||||||    
T  41960938 tatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattt 41960886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 37 - 127
Target Start/End: Complemental strand, 42434 - 42344
Alignment:
Q  37 agtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaatttccctaaa 127  Q
    ||||||||||||||||||||| |||| ||  |||||||||||||||||||||||| |||||||||||||||||||||| ||||| ||||||    
T  42434 agtggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcctaaa 42344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 120
Target Start/End: Complemental strand, 100876 - 100824
Alignment:
Q  68 tatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||| ||||||||||||| |||| | ||||||||||||||||||||||||||    
T  100876 tatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattt 100824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 8010 - 7890
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    ||||||||||||||||||||||||  |  ||| ||||||||||||||||||||  ||| |||| ||  |||||||||||||||| || |||||| |||||    
T  8010 actatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaacttcatcaaaaaagtcattct 7911  T
Q  100 catgacttcaccatagaattt 120  Q
     || |||||||||||||||||    
T  7910 tataacttcaccatagaattt 7890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 44080 - 43960
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||||||||||| |||| |  ||| |||||  |||||||||||||  |||||||| ||| ||||| ||||||||||||| ||||||  ||||    
T  44080 actatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttct 43981  T
Q  100 catgacttcaccatagaattt 120  Q
     | ||||||||||||||||||    
T  43980 tacgacttcaccatagaattt 43960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 154707 - 154827
Alignment:
Q  1 actatgaggactgaacttttgatgcgacagta-aaacagtggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattct 99  Q
    |||||||||||||||||||| |||| |  ||| |||||  |||||||||||||  |||||||| ||| ||||| ||||||||||||| ||||||  ||||    
T  154707 actatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaacttcaccaaaaaagtctttct 154806  T
Q  100 catgacttcaccatagaattt 120  Q
     | ||||||||||||||||||    
T  154807 tacgacttcaccatagaattt 154827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 40 - 120
Target Start/End: Complemental strand, 11990 - 11909
Alignment:
Q  40 ggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagtta-ttctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||| |||| ||  ||| ||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  11990 ggggtgttactcacaacacttttaatgttatggtgttaatttcaccagaaaagtcatttctcatgacttcaccatagaattt 11909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 39 - 120
Target Start/End: Original strand, 146117 - 146198
Alignment:
Q  39 tggggtgttactcacaacattttttataatatagtgttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    ||||||||||||||  |||||||||||  |||| ||||||||| |||| |||| | ||||| ||||||||||| ||||||||    
T  146117 tggggtgttactcattacattttttatgttataatgttaacttaaccaaaaaaatcattcttatgacttcaccgtagaattt 146198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 120
Target Start/End: Original strand, 12137 - 12183
Alignment:
Q  74 gttaacttcaccagaaaagttattctcatgacttcaccatagaattt 120  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattt 12183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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