View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13986_low_2 (Length: 398)

Name: NF13986_low_2
Description: NF13986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13986_low_2
NF13986_low_2
[»] chr7 (20 HSPs)
chr7 (8-398)||(7241197-7241587)
chr7 (75-234)||(20881665-20881825)
chr7 (145-230)||(22283777-22283862)
chr7 (143-234)||(40689015-40689107)
chr7 (133-203)||(35536046-35536117)
chr7 (70-160)||(33672954-33673044)
chr7 (108-234)||(37064493-37064622)
chr7 (168-234)||(47177611-47177677)
chr7 (157-234)||(30456479-30456556)
chr7 (131-198)||(1417201-1417269)
chr7 (158-234)||(12110325-12110401)
chr7 (69-148)||(39393692-39393770)
chr7 (131-216)||(27481341-27481427)
chr7 (133-230)||(27548202-27548300)
chr7 (164-234)||(39907774-39907844)
chr7 (157-230)||(38010678-38010751)
chr7 (143-234)||(20526395-20526487)
chr7 (125-200)||(22759117-22759193)
chr7 (157-205)||(30180015-30180063)
chr7 (119-178)||(35266824-35266884)
[»] chr5 (22 HSPs)
chr5 (69-264)||(9202743-9202943)
chr5 (85-234)||(12425462-12425612)
chr5 (86-264)||(39105356-39105539)
chr5 (166-234)||(7319379-7319447)
chr5 (119-234)||(42582837-42582953)
chr5 (73-128)||(16938013-16938068)
chr5 (117-234)||(4014453-4014571)
chr5 (164-234)||(41957480-41957550)
chr5 (157-216)||(14295470-14295529)
chr5 (119-170)||(42099954-42100005)
chr5 (122-195)||(34112803-34112877)
chr5 (184-229)||(7319335-7319380)
chr5 (133-216)||(16945030-16945112)
chr5 (133-162)||(18852952-18852981)
chr5 (133-206)||(32059646-32059719)
chr5 (157-234)||(41981894-41981971)
chr5 (133-216)||(4855637-4855721)
chr5 (119-234)||(7674573-7674689)
chr5 (140-234)||(10363696-10363792)
chr5 (133-216)||(32172592-32172676)
chr5 (69-149)||(32703563-32703643)
chr5 (186-234)||(32942611-32942659)
[»] chr4 (21 HSPs)
chr4 (69-234)||(3155478-3155644)
chr4 (141-234)||(51630058-51630152)
chr4 (75-180)||(50662815-50662921)
chr4 (70-205)||(26520287-26520424)
chr4 (133-232)||(27043861-27043961)
chr4 (133-234)||(6364088-6364190)
chr4 (164-234)||(56480319-56480389)
chr4 (133-234)||(437461-437564)
chr4 (135-234)||(44319891-44319990)
chr4 (139-180)||(41336706-41336747)
chr4 (157-279)||(47118946-47119071)
chr4 (120-234)||(1706548-1706663)
chr4 (164-271)||(25332745-25332857)
chr4 (159-234)||(26883961-26884036)
chr4 (159-234)||(32421071-32421146)
chr4 (157-228)||(35290222-35290293)
chr4 (93-215)||(45516656-45516779)
chr4 (124-180)||(7601689-7601746)
chr4 (169-234)||(35571660-35571725)
chr4 (157-206)||(54325094-54325143)
chr4 (133-227)||(40174504-40174597)
[»] chr6 (14 HSPs)
chr6 (119-264)||(9093551-9093701)
chr6 (69-159)||(35069427-35069517)
chr6 (157-234)||(31671103-31671180)
chr6 (133-206)||(29274286-29274360)
chr6 (69-177)||(264246-264355)
chr6 (133-205)||(22742305-22742378)
chr6 (70-159)||(23063633-23063722)
chr6 (85-180)||(9559624-9559720)
chr6 (157-270)||(2112165-2112280)
chr6 (70-156)||(2455140-2455227)
chr6 (184-234)||(21024202-21024252)
chr6 (122-199)||(24476530-24476608)
chr6 (131-216)||(33911329-33911414)
chr6 (157-279)||(2735033-2735159)
[»] chr2 (23 HSPs)
chr2 (111-234)||(8017352-8017475)
chr2 (164-234)||(18066099-18066169)
chr2 (157-234)||(12464502-12464579)
chr2 (133-216)||(18962085-18962169)
chr2 (164-264)||(1625871-1625975)
chr2 (75-205)||(2416194-2416325)
chr2 (168-264)||(26626848-26626948)
chr2 (69-234)||(42457823-42457989)
chr2 (73-178)||(7043809-7043913)
chr2 (193-279)||(16451118-16451208)
chr2 (119-261)||(750596-750742)
chr2 (157-227)||(11513862-11513932)
chr2 (91-162)||(32420077-32420150)
chr2 (119-180)||(42420377-42420439)
chr2 (173-234)||(680483-680544)
chr2 (157-230)||(22681218-22681291)
chr2 (158-264)||(29316771-29316880)
chr2 (131-200)||(29430693-29430762)
chr2 (131-215)||(30537575-30537660)
chr2 (133-193)||(44600478-44600541)
chr2 (119-178)||(4026742-4026802)
chr2 (235-279)||(32614929-32614972)
chr2 (119-206)||(39567828-39567916)
[»] chr3 (24 HSPs)
chr3 (75-264)||(402537-402730)
chr3 (133-234)||(39602239-39602340)
chr3 (133-279)||(21367611-21367757)
chr3 (144-233)||(33405197-33405287)
chr3 (188-234)||(28622028-28622074)
chr3 (85-206)||(30669027-30669149)
chr3 (136-233)||(44061053-44061151)
chr3 (164-233)||(1217830-1217899)
chr3 (102-234)||(14145820-14145953)
chr3 (125-180)||(2128334-2128390)
chr3 (139-230)||(30956659-30956751)
chr3 (139-230)||(30972471-30972563)
chr3 (158-197)||(21574456-21574495)
chr3 (119-232)||(36783365-36783480)
chr3 (133-210)||(20192659-20192737)
chr3 (135-216)||(22232767-22232849)
chr3 (137-206)||(52618946-52619016)
chr3 (138-230)||(24887316-24887409)
chr3 (125-197)||(32703069-32703142)
chr3 (139-215)||(37689432-37689509)
chr3 (119-262)||(46030913-46031063)
chr3 (191-279)||(46778171-46778262)
chr3 (174-264)||(52440658-52440751)
chr3 (119-175)||(30574002-30574057)
[»] chr8 (18 HSPs)
chr8 (73-234)||(34236041-34236203)
chr8 (133-234)||(3936788-3936890)
chr8 (75-279)||(10120638-10120846)
chr8 (133-279)||(10114429-10114579)
chr8 (74-234)||(37353278-37353439)
chr8 (131-230)||(4558735-4558835)
chr8 (135-198)||(16210951-16211015)
chr8 (235-279)||(32840966-32841010)
chr8 (133-215)||(7514517-7514600)
chr8 (85-263)||(9956810-9956991)
chr8 (157-216)||(29592579-29592638)
chr8 (144-197)||(35374439-35374493)
chr8 (123-195)||(14280469-14280542)
chr8 (72-176)||(26215374-26215479)
chr8 (164-233)||(31804484-31804553)
chr8 (157-233)||(29205772-29205848)
chr8 (186-234)||(36338291-36338339)
chr8 (157-197)||(42237488-42237528)
[»] chr1 (35 HSPs)
chr1 (133-234)||(2294850-2294952)
chr1 (69-230)||(9572141-9572303)
chr1 (72-264)||(27820332-27820532)
chr1 (134-234)||(37842384-37842485)
chr1 (157-279)||(31517721-31517846)
chr1 (76-145)||(33541837-33541906)
chr1 (68-149)||(47498958-47499039)
chr1 (134-233)||(1432455-1432555)
chr1 (119-194)||(38116257-38116330)
chr1 (133-288)||(27145707-27145866)
chr1 (164-234)||(7218103-7218173)
chr1 (141-234)||(10280596-10280690)
chr1 (133-202)||(43722376-43722446)
chr1 (133-234)||(49888706-49888808)
chr1 (135-276)||(3224364-3224509)
chr1 (139-276)||(24915034-24915176)
chr1 (73-149)||(5894278-5894354)
chr1 (157-254)||(14629971-14630074)
chr1 (119-232)||(23544670-23544785)
chr1 (133-180)||(48748666-48748713)
chr1 (193-264)||(6292493-6292567)
chr1 (186-265)||(7069294-7069377)
chr1 (184-230)||(33759561-33759607)
chr1 (164-229)||(25006068-25006133)
chr1 (186-252)||(34290229-34290299)
chr1 (134-234)||(34952155-34952256)
chr1 (212-262)||(38503462-38503516)
chr1 (157-279)||(51695475-51695600)
chr1 (186-234)||(7137027-7137075)
chr1 (133-216)||(15579422-15579505)
chr1 (119-178)||(27146333-27146393)
chr1 (131-206)||(44032056-44032132)
chr1 (135-198)||(45990123-45990187)
chr1 (131-206)||(49517007-49517083)
chr1 (119-202)||(51190786-51190870)
[»] scaffold0024 (2 HSPs)
scaffold0024 (133-218)||(27515-27601)
scaffold0024 (133-193)||(21348-21409)


Alignment Details
Target: chr7 (Bit Score: 347; Significance: 0; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 347; E-Value: 0
Query Start/End: Original strand, 8 - 398
Target Start/End: Complemental strand, 7241587 - 7241197
Alignment:
Q  8 atatcactatggtgtcatgttaaaattttatttcataaaatattgggacaaatatctaaccaggccctgtttggacgaacaacttatttgcaggttttaa 107  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  7241587 atatcactatggtgtcatgttaaaatattatttcataaaatattgggacaaatatctacccaggccctgtttggacgaacaacttatttgcaggttttaa 7241488  T
Q  108 cacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcg 207  Q
    |||||||||||||||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7241487 cacaagtgttcatcatgataagtgtttatgtataagcaatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcg 7241388  T
Q  208 taaactatctttgagaacttatgaaaactgaaaacaacctatgaacaatgtcataagtcgtttttataagttttttcaaaacagtcccacaactagtgaa 307  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||| |||||| ||||||    
T  7241387 taaactatctttgagaacttatgaaaactgaaaacaacttatgaacaatgtcataagtcgttttcataagttttttcaaaacggtctcacaaccagtgaa 7241288  T
Q  308 tgatgttaaataaatcaatccaaacaggcccttactgagatatgattgaaagtctgtgtacaactctcaatccatattaaataaattcata 398  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7241287 tgatgttaaataaatcaatccaaacaggcccttacttagatatgattgaaagtctgtgtacaactctcaatccatattaaataaattcata 7241197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 75 - 234
Target Start/End: Complemental strand, 20881825 - 20881665
Alignment:
Q  75 tgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagtt 173  Q
    ||||| || |||||||||||||| || || || ||||||   | |||||||||| |  |||||||| |||||| | ||||||||| ||| |||  |||||    
T  20881825 tgtttagatgaacaacttatttgtagtttatagcacaagcacttatcatgataagctcttatgtatgagctatatctatagcaaaagataaaacgaagtt 20881726  T
Q  174 aaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||| | | || |||||||||| | ||||| |||||||||||  ||||||||||||||    
T  20881725 aaattgtttccgtacaagctataagttgttttcataaactatcttaaagaacttatgaaaa 20881665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 230
Target Start/End: Complemental strand, 22283862 - 22283777
Alignment:
Q  145 tatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    ||||| |||||||||||| ||||||||||||||||| |   ||| |||||||| || ||||| ||||| ||||| |||||||||||    
T  22283862 tatttctatagcaaagataaaataaagttaaattgtttttgtatcagctataaactgttttcataaaccatcttagagaacttatg 22283777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 143 - 234
Target Start/End: Complemental strand, 40689107 - 40689015
Alignment:
Q  143 gctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||| ||||||||| ||| ||||||||||||||| | | ||||||||||||||||| | ||| ||| ||||| | || ||||||||||||    
T  40689107 gctatttctatagcaaaagataaaataaagttaaattattttcatataagctataagctgtgttcataagctatcctggataacttatgaaaa 40689015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 203
Target Start/End: Original strand, 35536046 - 35536117
Alignment:
Q  133 ttatgtataagctatttatatagca-aagatcaaataaagttaaattgtgtacatataagctataagctatt 203  Q
    ||||||||||||||||| |||| || ||||| ||||||||| ||||||| | |||||||| |||||||||||    
T  35536046 ttatgtataagctatttctataacataagataaaataaagtcaaattgttttcatataagttataagctatt 35536117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 70 - 160
Target Start/End: Original strand, 33672954 - 33673044
Alignment:
Q  70 ggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaag 160  Q
    |||||||||||||  ||| | |||||||||| || || ||||||| || || ||||||| || |||||||||||||| || ||||||||||    
T  33672954 ggccctgtttggataaactatttatttgcagcttatagcacaagtatttattatgataagcgcttatgtataagctacttctatagcaaag 33673044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 108 - 234
Target Start/End: Complemental strand, 37064622 - 37064493
Alignment:
Q  108 cacaagtgttcatcatgataaacgtttatgtata--agctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattt 204  Q
    ||||| |||| || ||||||| || ||||||| |  |||||||| |||||| |||||| ||||| ||||||||||| |  | ||| |||||||||| |||    
T  37064622 cacaactgtttatgatgataagcgcttatgtacatgagctatttctatagccaaagatgaaatacagttaaattgtttttacatatgctataagctgttt 37064523  T
Q  205 tcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| |||| || ||| |||||||||||    
T  37064522 tcgtaagctattttagaggacttatgaaaa 37064493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 168 - 234
Target Start/End: Original strand, 47177611 - 47177677
Alignment:
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||| | ||||||||||||||||| |||||  || ||||||| ||||| |||||||||    
T  47177611 aaagttaaattgttttcatataagctataagctgttttcaaaagctatcttggagaatttatgaaaa 47177677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 30456556 - 30456479
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| ||||||||| ||||||| | |||||||| ||||||   ||||| ||||||||||| |||| ||||||||||    
T  30456556 aaagataaaataaagtcaaattgttttcatataagttataagtggttttcataaactatcttggagagcttatgaaaa 30456479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 198
Target Start/End: Original strand, 1417201 - 1417269
Alignment:
Q  131 gtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataag 198  Q
    |||||||||||| ||||||||||| | |||||| ||||||||| ||||||| | ||||||||| |||||    
T  1417201 gtttatgtataaactatttatataacaaaagataaaataaagtcaaattgttttcatataagcaataag 1417269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 234
Target Start/End: Original strand, 12110325 - 12110401
Alignment:
Q  158 aagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||| ||||||||| ||||||| |   ||||||||||||||| ||||| ||| |||||||  ||||||||||||||    
T  12110325 aagataaaataaagtcaaattgttttggtataagctataagctgttttcataagctatcttgaagaacttatgaaaa 12110401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 69 - 148
Target Start/End: Complemental strand, 39393770 - 39393692
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatt 148  Q
    |||||||||||||| ||||| ||||||||||| || || ||||||  || |||||||||| || |||| |||||||||||    
T  39393770 aggccctgtttggatgaacagcttatttgcagcttatagcacaagctttgatcatgataagcgcttat-tataagctatt 39393692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 27481427 - 27481341
Alignment:
Q  131 gtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    ||||||||||||||||||| |||| |||| ||| |||  |||| ||| ||| | ||||||||||||||| ||||||| ||| |||||    
T  27481427 gtttatgtataagctatttctataacaaaggataaaacgaagtcaaactgtttccatataagctataagttattttcataagctatc 27481341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 230
Target Start/End: Original strand, 27548202 - 27548300
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    |||| ||||||||||||   ||||||| ||| |||||||||  |||||| | ||| ||||||||||||| ||||| ||| ||||||| || ||||||||    
T  27548202 ttatctataagctatttccttagcaaaagataaaataaagtctaattgttttcatttaagctataagctgttttcataagctatcttggataacttatg 27548300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 39907774 - 39907844
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| |||||||||| |   |||||||||||| || ||||| ||||||||||| ||||||| |||||||    
T  39907774 aaataaggttaaattgtttttgtataagctataaactgttttcataaactatcttagagaactaatgaaaa 39907844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Original strand, 38010678 - 38010751
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    |||||| ||| ||||  ||||||| | ||||||||||||||||| ||||| ||| ||||| | |||||||||||    
T  38010678 aaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatg 38010751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 234
Target Start/End: Original strand, 20526395 - 20526487
Alignment:
Q  143 gctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||| |||||||||||| ||| ||||||||||||||| |||   || | |||||||||| ||||| ||| |||| || ||||||| |||||||    
T  20526395 gctacttatatagcaaaagataaaataaagttaaattatgtttgtacatgctataagctgttttcataagctattttggagaactaatgaaaa 20526487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 125 - 200
Target Start/End: Original strand, 22759117 - 22759193
Alignment:
Q  125 ataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagct 200  Q
    |||| ||||||||| |||||||||| |||| |||| ||| ||||||||  ||||||| | ||||||||||| |||||    
T  22759117 ataagcgtttatgtttaagctatttgtataacaaaagataaaataaaggaaaattgttttcatataagctaaaagct 22759193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 205
Target Start/End: Original strand, 30180015 - 30180063
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctatttt 205  Q
    |||||| ||||||||||||||||| | | ||||||||||||||| ||||    
T  30180015 aaagataaaataaagttaaattgttttcgtataagctataagctgtttt 30180063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 35266824 - 35266884
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaatt 178  Q
    |||||||||||| | ||| |||||||||||| |||| |||| ||| |||||||||||||||    
T  35266824 atcatgataaacatctatttataagctatttctataacaaatgattaaataaagttaaatt 35266884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 1e-32; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 69 - 264
Target Start/End: Complemental strand, 9202943 - 9202743
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaat 167  Q
    ||||||||||||||  |||| ||||||||||| || || |||||||||| ||||||||||  | |||| |||||||||||| | |||| |||||| ||||    
T  9202943 aggccctgtttggataaacatcttatttgcagcttatagcacaagtgtttatcatgataagtgcttatatataagctatttctgtagcaaaagataaaat 9202844  T
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataa 263  Q
    ||||||||||||| | ||||||||| ||||||| ||||| |||  ||||||  ||||||||||||||    ||| ||||| | |||||||||||||||||    
T  9202843 aaagttaaattgttttcatataagcaataagctgttttcataagttatcttgaagaacttatgaaaataagctggaaacagcttatgaacaatgtcataa 9202744  T
Q  264 g 264  Q
    |    
T  9202743 g 9202743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 85 - 234
Target Start/End: Original strand, 12425462 - 12425612
Alignment:
Q  85 aacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgta 183  Q
    |||| ||||||||||| || ||  ||||||||| ||||||||||||| |||||||||| |||||||||||| ||| ||| ||||||||||||||||| |     
T  12425462 aacatcttatttgcagcttatagtacaagtgtttatcatgataaacgcttatgtataaactatttatatagtaaaagataaaataaagttaaattgtttt 12425561  T
Q  184 catataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    | ||||||||||||||| |||||  || ||||||| |||||||||||||||    
T  12425562 cgtataagctataagctgttttcacaagctatcttggagaacttatgaaaa 12425612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 86 - 264
Target Start/End: Original strand, 39105356 - 39105539
Alignment:
Q  86 acaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtac 184  Q
    ||||||||||||||| || || || ||||| | |||||||||| || ||||||||||||||||| |||||| ||| || |||| |||||||||||| | |    
T  39105356 acaacttatttgcagcttatagcataagtgcttatcatgataagcgcttatgtataagctatttctatagctaaatatgaaatgaagttaaattgttttc 39105455  T
Q  185 atataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataag 264  Q
     |||||||||||| || ||||| ||| ||||||| |||||||||||||||    || |||| | | ||||||||||||||||||    
T  39105456 gtataagctataatctgttttcataagctatcttggagaacttatgaaaataagctaaaaatagcttatgaacaatgtcataag 39105539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 166 - 234
Target Start/End: Original strand, 7319379 - 7319447
Alignment:
Q  166 ataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||||| | |||||||||||||| || ||||||||| ||||||| |||||||||| ||||    
T  7319379 ataaagttaaattgttttcatataagctataaactgttttcgtaagctatcttggagaacttataaaaa 7319447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 42582837 - 42582953
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatat-agcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatct 217  Q
    ||||| |||| || |||||||||||||||||  || |  |||||| ||||||||||||||||||| | | |||| |||||||| |||| |||| |||| |    
T  42582837 atcataataagcgcttatgtataagctatttccatgataaaagatgaaataaagttaaattgtgttcgtttaaggtataagctgtttttgtaagctatat 42582936  T
Q  218 ttgagaacttatgaaaa 234  Q
    | |||||||||||||||    
T  42582937 tggagaacttatgaaaa 42582953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 16938068 - 16938013
Alignment:
Q  73 cctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataa 128  Q
    ||||||||||| ||||||||||||| || || ||||||||||||| ||||||||||    
T  16938068 cctgtttggacaaacaacttatttgaagcttataacacaagtgtttatcatgataa 16938013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 4014571 - 4014453
Alignment:
Q  117 tcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactat 215  Q
    |||||||||||| ||  |||||||||||||||| |||||| |||||| ||||||||||| ||||| |    | ||   ||||||| ||||| ||| ||||    
T  4014571 tcatcatgataagcgcctatgtataagctatttctatagcaaaagataaaataaagttagattgtttttggaaaaatgataagctgttttcataagctat 4014472  T
Q  216 ctttgagaacttatgaaaa 234  Q
    ||| |||||||||||||||    
T  4014471 cttggagaacttatgaaaa 4014453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 41957550 - 41957480
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||| |||||||||||| | ||| |||| |||||||| ||||| ||| ||||| |||||||||||||||||    
T  41957550 aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaaa 41957480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Original strand, 14295470 - 14295529
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||| ||||||||| ||| ||| | ||||||||||||||||| ||||||||| |||||    
T  14295470 aaagataaaataaagtcaaactgttttcatataagctataagctgttttcgtaagctatc 14295529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 170
Target Start/End: Complemental strand, 42100005 - 42099954
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaagatcaaataaa 170  Q
    ||||||||||  | ||||||||||||||||||||||||||| || |||||||    
T  42100005 atcatgataagtgcttatgtataagctatttatatagcaaaaataaaataaa 42099954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 195
Target Start/End: Original strand, 34112803 - 34112877
Alignment:
Q  122 atgataaacgtttatgtataagctatttatatag-caaagatcaaataaagttaaattgtgtacatataagctat 195  Q
    ||||||| || ||||||||||||||||| |||||  |||||| || ||||||||| |||| | ||||||||||||    
T  34112803 atgataagcgcttatgtataagctatttctatagtaaaagattaattaaagttaagttgttttcatataagctat 34112877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 229
Target Start/End: Original strand, 7319335 - 7319380
Alignment:
Q  184 catataagctataagctattttcgtaaactatctttgagaacttat 229  Q
    |||||||||||||| || ||||||||| ||||||| ||||||||||    
T  7319335 catataagctataaactgttttcgtaagctatcttggagaacttat 7319380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 16945112 - 16945030
Alignment:
Q  133 ttatgtataagctatttatata-gcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    ||||||||||||||||| || | | |||||| |||||  |||||||||| | |||| |||||||||||||||||| | |||||||    
T  16945112 ttatgtataagctatttctacaagaaaagataaaata--gttaaattgttttcatagaagctataagctattttcattaactatc 16945030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 162
Target Start/End: Original strand, 18852952 - 18852981
Alignment:
Q  133 ttatgtataagctatttatatagcaaagat 162  Q
    ||||||||||||||||||||||||||||||    
T  18852952 ttatgtataagctatttatatagcaaagat 18852981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 32059719 - 32059646
Alignment:
Q  133 ttatgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    ||||||||||||| ||| | || | ||||| ||||||||| ||| ||| | ||||||||||||||||| |||||    
T  32059719 ttatgtataagctgtttttgtaactaagataaaataaagtcaaactgttttcatataagctataagctgttttc 32059646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 41981971 - 41981894
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| |||||||| |||| ||| |   ||||| ||||||||| ||||| |||||||| |||||||||||| |||||    
T  41981971 aaagataaaataaagctaaaatgtttttgtataaactataagctgttttcataaactatttttgagaacttacgaaaa 41981894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 4855637 - 4855721
Alignment:
Q  133 ttatgtataagctatttatatagcaaaga-tcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||||| |||||||| |||| |||| | | |||||||||||||||||   |||||||| |||||| | ||||| |||||||||    
T  4855637 ttatgtattagctatttttataacaaaaaataaaataaagttaaattgttatcatataagttataagttgttttcataaactatc 4855721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 234
Target Start/End: Original strand, 7674573 - 7674689
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatct 217  Q
    |||||||||| |  |||| |||||||||||| |||| | |||||| ||||||| ||||||||| | | ||||||| ||||  | ||||| ||| ||||||    
T  7674573 atcatgataagcacttatatataagctatttctataccaaaagataaaataaatttaaattgttttcttataagccataaaatgttttcataagctatct 7674672  T
Q  218 ttgagaacttatgaaaa 234  Q
    | ||||| || ||||||    
T  7674673 tggagaatttgtgaaaa 7674689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 234
Target Start/End: Original strand, 10363696 - 10363792
Alignment:
Q  140 taagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagcta-ttttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||||||| |||| |||| ||| ||||||||||||||||| | ||| | | | |||||||| ||||| ||||||||||  |||||||| ||||||    
T  10363696 taagctatttctataacaaaagataaaataaagttaaattgttttcatgttaacaataagctatttttcataaactatctcagagaacttgtgaaaa 10363792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 32172592 - 32172676
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||||||| |||||| || | |||| ||| |||| |||| || |||| ||||||||||||||||||| ||||| ||| |||||    
T  32172592 ttatgtataaactatttctacaacaaaagataaaatgaagtcaagttgtttacatataagctataagctgttttcataagctatc 32172676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 69 - 149
Target Start/End: Complemental strand, 32703643 - 32703563
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctattt 149  Q
    ||||||||||| ||  |||||||||||||||| || || ||||||  || |||||||||| || ||||||  |||||||||    
T  32703643 aggccctgtttagaaaaacaacttatttgcagcttatagcacaagcatttatcatgataagcgcttatgttaaagctattt 32703563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 32942611 - 32942659
Alignment:
Q  186 tataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||| |||||||||| ||||| ||| ||||||| |||||||||||||||    
T  32942611 tatatgctataagctgttttcataagctatcttggagaacttatgaaaa 32942659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 21)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 3155478 - 3155644
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaat 167  Q
    ||||||| ||||||  |||||||||| ||||| || ||  ||||| | | |||||||||| | | |||||||||||||||| |||||| |||||| ||||    
T  3155478 aggccctatttggataaacaacttatctgcagcttatagtacaagcgcttatcatgataagcatgtatgtataagctatttctatagcaaaagataaaat 3155577  T
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||| |   || |||||| ||||| ||||| |||||||||||  |||||| |||||||    
T  3155578 aaagttaaattgtttttgtacaagctacaagctgttttcataaactatcttgaagaactaatgaaaa 3155644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 51630058 - 51630152
Alignment:
Q  141 aagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||||| ||| |||||||  |||| |||||||||    
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataagctattttcataagctatcttgaagaatttatgaaaa 51630152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 75 - 180
Target Start/End: Complemental strand, 50662921 - 50662815
Alignment:
Q  75 tgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagca-aagatcaaataaagtt 173  Q
    ||||||||  |||||||||||||||| || || |||||| | | |||||||| | |||||||||||||||||||| ||||||| ||||| |||||| |||    
T  50662921 tgtttggataaacaacttatttgcagcttatatcacaagagcttatcatgatgagcgtttatgtataagctatttttatagcataagataaaataatgtt 50662822  T
Q  174 aaattgt 180  Q
    |||||||    
T  50662821 aaattgt 50662815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 70 - 205
Target Start/End: Complemental strand, 26520424 - 26520287
Alignment:
Q  70 ggccctgtttggacgaacaactta-tttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaat 167  Q
    |||||||||||||  ||||||||| ||||| | || || || ||||||| |||||||||| |  |||||||||| || ||| |||| |||| ||| ||||    
T  26520424 ggccctgtttggataaacaacttaatttgctgcttctagcataagtgtttatcatgataagcacttatgtataaactgtttctataacaaaagatgaaat 26520325  T
Q  168 aaagttaaattgtgtacatataagctataagctatttt 205  Q
    ||||||||||||| | | | ||||||||||||||||||    
T  26520324 aaagttaaattgttttcgtgtaagctataagctatttt 26520287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 232
Target Start/End: Complemental strand, 27043961 - 27043861
Alignment:
Q  133 ttatgtataagctatttatatagcaaag-atcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||||||||| || ||||||| ||||| || ||||||||||||||||| | | ||||||||||||| | ||||  ||||||||||| |||||| |||||    
T  27043961 ttatgtataaggtacttatataacaaaggataaaataaagttaaattgttttcgtataagctataagatgtttttataaactatcttggagaacgtatga 27043862  T
Q  232 a 232  Q
    |    
T  27043861 a 27043861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 6364088 - 6364190
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||||||||||||||| |||| |||| ||| ||||||||| ||||| ||| || ||||||||||||| |||||| ||| ||||  | ||||||||| ||    
T  6364088 ttatgtataagctatttctataacaaaagataaaataaagtgaaattctgttcacataagctataagcaattttcataagctataatggagaacttacga 6364187  T
Q  232 aaa 234  Q
    |||    
T  6364188 aaa 6364190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 56480319 - 56480389
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||||||| ||  |||||| |||||||| ||||| ||||||||||| |||| ||||||||||    
T  56480319 aaataaagttaaattgtttatgtataagttataagctgttttcataaactatcttggagagcttatgaaaa 56480389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 437564 - 437461
Alignment:
Q  133 ttatgtataagctatttat-atagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    ||||||||||||||||| | |||||||| ||| ||||||||||||||||||| |||||||| | |||| | ||||| ||| |||| || |||  ||||||    
T  437564 ttatgtataagctattttttatagcaaaagataaaataaagttaaattgtgttcatataagttttaagttgttttcataagctattttagaggccttatg 437465  T
Q  231 aaaa 234  Q
    ||||    
T  437464 aaaa 437461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 135 - 234
Target Start/End: Original strand, 44319891 - 44319990
Alignment:
Q  135 atgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||||| |||||| ||||  |||||| |||||||||  || ||| | ||||||||||| ||||||||||  ||| ||||| | |||||||||||||||    
T  44319891 atgtataaactatttctataaaaaagataaaataaagtcgaactgttttcatataagctacaagctattttgataagctatcctagagaacttatgaaaa 44319990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 180
Target Start/End: Original strand, 41336706 - 41336747
Alignment:
Q  139 ataagctatttatatagcaaagatcaaataaagttaaattgt 180  Q
    ||||||||||| |||||||||||| |||||||||||||||||    
T  41336706 ataagctatttttatagcaaagataaaataaagttaaattgt 41336747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 47119071 - 47118946
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga----aaactgaaaacaacctatgaa 252  Q
    |||||| ||| ||||||||||||| | ||||||||||||||| | | ||| ||  |||||||  |||||||||||    || |||||||||||| || ||    
T  47119071 aaagataaaacaaagttaaattgttttcatataagctataagttgtattcatatgctatcttgaagaacttatgaagataagctgaaaacaaccaat-aa 47118973  T
Q  253 caatgtcataagtcgtttttataagtt 279  Q
    ||||||||| ||| ||||| |||||||    
T  47118972 caatgtcatgagttgttttcataagtt 47118946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 120 - 234
Target Start/End: Original strand, 1706548 - 1706663
Alignment:
Q  120 tcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctt 218  Q
    |||||||||  | ||||||| ||||||||| ||||| ||| | | |||||| ||| |||||| | | || |||||||||||| ||||| |||||||||||    
T  1706548 tcatgataagtgcttatgtagaagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagctataagctgttttcataaactatctt 1706647  T
Q  219 tgagaacttatgaaaa 234  Q
     || | ||||||||||    
T  1706648 ggacagcttatgaaaa 1706663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 164 - 271
Target Start/End: Original strand, 25332745 - 25332857
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctt-tgagaacttatgaaaa----ctgaaaacaacctatgaacaatgt 258  Q
    |||| |||||||||||| |   |||||||| |||||||||||  ||| ||||||| | ||||||||||||||    ||||||||||| |||||| ||||     
T  25332745 aaatgaagttaaattgtttttgtataagctctaagctatttttataagctatcttatcagaacttatgaaaataagctgaaaacaacttatgaataatgc 25332844  T
Q  259 cataagtcgtttt 271  Q
    ||||||| |||||    
T  25332845 cataagttgtttt 25332857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 26883961 - 26884036
Alignment:
Q  159 agatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||| |||| |||||||||||| | |||||||||||||||   |||||||||||| | || |||||| ||||||||    
T  26883961 agataaaatgaagttaaattgttttcatataagctataagtcgttttcgtaaactttattggagaacctatgaaaa 26884036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 32421071 - 32421146
Alignment:
Q  159 agatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||| |||||||||| |||||| ||||||||||||||||||  ||| | ||| |||| ||  ||||||||||||||    
T  32421071 agataaaataaagtttaattgtttacatataagctataagcagtttccataagctattttgaagaacttatgaaaa 32421146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 228
Target Start/End: Complemental strand, 35290293 - 35290222
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaactta 228  Q
    |||||| ||||||||||||||||| | |||||||| || ||||| ||||| ||| |||||||| ||| ||||    
T  35290293 aaagataaaataaagttaaattgtattcatataagttagaagcttttttcataagctatctttaagagctta 35290222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 93 - 215
Target Start/End: Original strand, 45516656 - 45516779
Alignment:
Q  93 atttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaaga-tcaaataaagttaaattgtgtacatataag 191  Q
    |||||||| || || || || |||| ||||||||||| ||||||||||||| ||||  |||| |||| | | |||||||| |||||||| ||| || ||     
T  45516656 atttgcagcttatagcataaatgtttatcatgataaatgtttatgtataagttattcctataacaaaaactaaaataaagctaaattgtttacgtagaaa 45516755  T
Q  192 ctataagctattttcgtaaactat 215  Q
    ||||||  | ||||||||||||||    
T  45516756 ctataaattgttttcgtaaactat 45516779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 180
Target Start/End: Original strand, 7601689 - 7601746
Alignment:
Q  124 gataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgt 180  Q
    ||||| || ||||||||||||||||  ||||||||| ||| |||||||||||||||||    
T  7601689 gataagcgcttatgtataagctattcctatagcaaaggataaaataaagttaaattgt 7601746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 169 - 234
Target Start/End: Complemental strand, 35571725 - 35571660
Alignment:
Q  169 aagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| ||||| | | ||||||||||||||| ||||| ||| ||||||| |||||||| ||||||    
T  35571725 aagttatattgttttcgtataagctataagctgttttcataagctatcttagagaacttgtgaaaa 35571660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 206
Target Start/End: Complemental strand, 54325143 - 54325094
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    |||||| ||||||||| ||| ||| | |||||||||||||||||||||||    
T  54325143 aaagataaaataaagtcaaactgttttcatataagctataagctattttc 54325094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 227
Target Start/End: Original strand, 40174504 - 40174597
Alignment:
Q  133 ttatgtataagctatttatatagcaaagatcaaat-aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaactt 227  Q
    ||||||||||||||||||||  ||||| |  |||| ||||||||||||| | |||| |||||||||||| ||||| ||| |||  || ||||||||    
T  40174504 ttatgtataagctatttata--gcaaaaaataaattaaagttaaattgttttcataaaagctataagctgttttcataagctacattggagaactt 40174597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 50; Significance: 2e-19; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 119 - 264
Target Start/End: Complemental strand, 9093701 - 9093551
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatct 217  Q
    |||||||||| || ||||| ||||||||||| |||| |||| ||| ||||||||||||||||| | | ||||||||||||||| ||||| ||| || |||    
T  9093701 atcatgataagcgcttatggataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagctgtct 9093602  T
Q  218 ttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataag 264  Q
    | ||||||||| |||||    |||||||||   ||| ||||||||||||||    
T  9093601 tagagaacttaagaaaataagctgaaaacaggttattaacaatgtcataag 9093551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 159
Target Start/End: Original strand, 35069427 - 35069517
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa 159  Q
    ||||||||||| ||  |||||||||||||||| || || |||||| ||| ||||||||||  | ||||| |||||||||||||||||||||    
T  35069427 aggccctgttttgataaacaacttatttgcagcttatagcacaagcgtttatcatgataagtgcttatgcataagctatttatatagcaaa 35069517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 31671180 - 31671103
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| ||| ||||||||||||| | ||||||||||||||||| ||||||||||||||| | || | ||||||||||    
T  31671180 aaagataaaacaaagttaaattgttttcatataagctataagctgttttcgtaaactatcctagatagcttatgaaaa 31671103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 206
Target Start/End: Complemental strand, 29274360 - 29274286
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    ||||||||||||||||| ||||||||| ||| ||||||||| ||||||| | |||||||||||||| || |||||    
T  29274360 ttatgtataagctatttctatagcaaaagataaaataaagtcaaattgttttcatataagctataaactgttttc 29274286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 69 - 177
Target Start/End: Original strand, 264246 - 264355
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaat 167  Q
    ||||||||||||||  |||| || |||||||| || || |||||||| | ||||||||||  | |||| |||||||||||| || ||| |||||| ||||    
T  264246 aggccctgtttggattaacagctaatttgcagcttatagcacaagtgcttatcatgataagtgcttatatataagctatttctaaagcaaaagataaaat 264345  T
Q  168 aaagttaaat 177  Q
    ||||||||||    
T  264346 aaagttaaat 264355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 22742305 - 22742378
Alignment:
Q  133 ttatgtataagctatttatatagcaaag-atcaaataaagttaaattgtgtacatataagctataagctatttt 205  Q
    |||| |||||||||||| |||| ||||| || ||||||||| ||||||| | ||||||||||||||||||||||    
T  22742305 ttatctataagctatttgtataacaaaggataaaataaagtcaaattgttttcatataagctataagctatttt 22742378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 70 - 159
Target Start/End: Complemental strand, 23063722 - 23063633
Alignment:
Q  70 ggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa 159  Q
    |||||||||||||  | |||||||||||||  || || ||||| || | |||||||||| ||||||||||||| |||||| |||||||||    
T  23063722 ggccctgtttggattatcaacttatttgcatcttatagcacaaatgattatcatgataagcgtttatgtataacctatttttatagcaaa 23063633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 180
Target Start/End: Complemental strand, 9559720 - 9559624
Alignment:
Q  85 aacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgt 180  Q
    |||||| ||||||||| || || | |||| ||| |||| ||||| || ||||||||||| ||||| |||||| |||||| ||||||| |||||||||    
T  9559720 aacaacctatttgcagtttatagctcaagagtttatcaagataagcgcttatgtataagttatttctatagcaaaagataaaataaatttaaattgt 9559624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 270
Target Start/End: Original strand, 2112165 - 2112280
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttat-ga---aaactgaaaacaacctatgaa 252  Q
    |||||| ||||||||||||||||| | ||||||| ||||||| | ||||| ||||||||||| |||  ||||| ||   |||| ||||||||| ||||||    
T  2112165 aaagataaaataaagttaaattgt-ttcatataaactataagttgttttcataaactatcttagagtgcttatagaaataaaccgaaaacaacttatgaa 2112263  T
Q  253 caatgtcataagtcgttt 270  Q
    | ||||||||||| ||||    
T  2112264 c-atgtcataagttgttt 2112280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 70 - 156
Target Start/End: Original strand, 2455140 - 2455227
Alignment:
Q  70 ggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacg-tttatgtataagctatttatatagc 156  Q
    |||| |||||||| |||||| |||||||||| || |  |||||||| ||||| | |||| || |||||||||||||||||| ||||||    
T  2455140 ggccatgtttggatgaacaatttatttgcagcttatggcacaagtgctcatcgtaataagcgctttatgtataagctatttctatagc 2455227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 234
Target Start/End: Original strand, 21024202 - 21024252
Alignment:
Q  184 catataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||| ||||||||||||| || |||||| | |||||||||||||||    
T  21024202 catataagcaataagctattttcatatactatcctcgagaacttatgaaaa 21024252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 24476530 - 24476608
Alignment:
Q  122 atgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagc 199  Q
    |||||||||  ||||||||||||||||| |||||| |||||| ||||  ||||||||| | | ||||||||| ||||||    
T  24476530 atgataaacacttatgtataagctatttctatagcaaaagataaaatgtagttaaattattttcatataagcgataagc 24476608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 33911414 - 33911329
Alignment:
Q  131 gtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||||||||| |||||| |||| |||| ||||||||||||||||| ||  | |||||||  |||||||| ||||| |||||||||    
T  33911414 gtttatgtataatctatttttataacaaaagatcaaataaagttaaactg-atccatataatttataagctgttttcataaactatc 33911329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 279
Target Start/End: Original strand, 2735033 - 2735159
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaa 252  Q
    |||||| ||||||||||||||| | |   ||||| ||||||||| ||||| ||| | |||||  | ||||||||||||    | ||||||| | ||||||    
T  2735033 aaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaatcttgaacaacttatgaaaataagccgaaaacagcttatgaa 2735132  T
Q  253 caatgtcataagtcgtttttataagtt 279  Q
     ||||||||||| |||||| |||||||    
T  2735133 aaatgtcataagccgttttcataagtt 2735159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 3e-18; HSPs: 23)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 111 - 234
Target Start/End: Original strand, 8017352 - 8017475
Alignment:
Q  111 aagtgttcatcatgataaacgtttatgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaa 210  Q
    ||||||| ||||||||| ||| |||||||| |||||||| ||||  || ||| ||| ||||||||||| | | |||||||||| ||| || ||||| |||    
T  8017352 aagtgtttatcatgatacacgcttatgtatcagctatttctatacaaaggataaaacaaagttaaattattttcatataagctgtaaactgttttcataa 8017451  T
Q  211 actatctttgagaacttatgaaaa 234  Q
     ||||||| |||||||||||||||    
T  8017452 gctatcttggagaacttatgaaaa 8017475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 164 - 234
Target Start/End: Original strand, 18066099 - 18066169
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||||||| | ||||||||||||||||| ||||| ||| ||||||| ||||||||| |||||    
T  18066099 aaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaa 18066169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 234
Target Start/End: Complemental strand, 12464579 - 12464502
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| ||||||||||||||||| |   |||| |||||||||||||||| ||| ||||||| |||||||| ||||||    
T  12464579 aaagataaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaa 12464502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 18962169 - 18962085
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||||| |||||||| |||| |||| ||| ||||||||||||| ||| | |||||||||||||| |||||||| ||| |||||    
T  18962169 ttatgtattagctatttttataacaaaagataaaataaagttaaactgttttcatataagctataaactattttcataagctatc 18962085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 164 - 264
Target Start/End: Original strand, 1625871 - 1625975
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtc 259  Q
    ||||||||||||||||| | | |||||| |||||| | ||||| ||| ||||||| ||||||||| |||||    ||||||||| | |||||||| ||||    
T  1625871 aaataaagttaaattgttttcgtataagttataagttgttttcataagctatcttggagaacttacgaaaatcagctgaaaacatcttatgaacattgtc 1625970  T
Q  260 ataag 264  Q
    |||||    
T  1625971 ataag 1625975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 75 - 205
Target Start/End: Original strand, 2416194 - 2416325
Alignment:
Q  75 tgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagtt 173  Q
    ||||||||  |||||||||||| ||| || || |||||||  | |||||| |||  | ||||||||||| ||||| | ||||||| ||| |||| |||||    
T  2416194 tgtttggataaacaacttattttcagcttatagcacaagttcttatcatgttaagtgcttatgtataagttatttctgtagcaaaagataaaatgaagtt 2416293  T
Q  174 aaattgtgtacatataagctataagctatttt 205  Q
    ||||||| |  |||||||||||||||| ||||    
T  2416294 aaattgttttgatataagctataagctgtttt 2416325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 168 - 264
Target Start/End: Original strand, 26626848 - 26626948
Alignment:
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataa 263  Q
    ||||||||||||| | | ||||||||| ||||| ||||| ||| |||||||  ||||||||||||||    |||||||||   |||||||||||||||||    
T  26626848 aaagttaaattgttttcgtataagctagaagctgttttcataagctatcttgcagaacttatgaaaataacctgaaaacagattatgaacaatgtcataa 26626947  T
Q  264 g 264  Q
    |    
T  26626948 g 26626948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 69 - 234
Target Start/End: Original strand, 42457823 - 42457989
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatag-caaagatcaaat 167  Q
    ||||||||||||||  ||| |||||||||  | || || |||||| |   |||||||||| | ||||||||||| |||||| |||||  |||||| ||||    
T  42457823 aggccctgtttggattaaccacttatttgtggcttatagcacaagcgcctatcatgataagcatttatgtataatctatttctatagtaaaagataaaat 42457922  T
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||| |   | |||||| | |||| | ||| ||| ||||||| |||||| ||||||||    
T  42457923 aaagttaaattgtttttgtttaagctcttagctgtattcataagctatcttagagaacatatgaaaa 42457989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 73 - 178
Target Start/End: Complemental strand, 7043913 - 7043809
Alignment:
Q  73 cctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaagatcaaataaagt 172  Q
    ||||||||||  |||||||||||||||| || ||||| |  |||| ||||  ||||||| ||||||||||| ||||| ||||| ||  || |||||||||    
T  7043913 cctgtttggataaacaacttatttgcagcttataacatagatgtttatcacaataaacgcttatgtataagttatttctatag-aacaataaaataaagt 7043815  T
Q  173 taaatt 178  Q
    ||||||    
T  7043814 taaatt 7043809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 193 - 279
Target Start/End: Original strand, 16451118 - 16451208
Alignment:
Q  193 tataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataagtcgtttttataagtt 279  Q
    |||||||| ||||||||| ||||||| |||||||  ||||||    ||||||||| |  |||||||||||||||||| ||||| |||||||    
T  16451118 tataagctgttttcgtaagctatcttggagaactcgtgaaaataagctgaaaacagctcatgaacaatgtcataagttgttttcataagtt 16451208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 261
Target Start/End: Original strand, 750596 - 750742
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaagatcaaat-aaagttaaattgtgtacatataagctataagctattttcgtaaactatct 217  Q
    ||||| |||| ||||||||||||| || ||| ||||||||||   |||| | ||||||| ||| ||| |||||||||| ||||  |||| ||| ||||||    
T  750596 atcatcataagcgtttatgtataaactgtttctatagcaaagggtaaatgagagttaaactgtttacgtataagctatgagct-gtttcataagctatct 750694  T
Q  218 ttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcat 261  Q
    | ||||||||||| |||    || |||||| | |||||||||||||||    
T  750695 tggagaacttatgcaaataagctcaaaacagcttatgaacaatgtcat 750742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 227
Target Start/End: Original strand, 11513862 - 11513932
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaactt 227  Q
    |||||| ||||||||| ||||||| | ||||||||||||||| | ||||| ||| ||||| | ||||||||    
T  11513862 aaagataaaataaagtcaaattgttttcatataagctataagttgttttcataagctatcatggagaactt 11513932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 91 - 162
Target Start/End: Original strand, 32420077 - 32420150
Alignment:
Q  91 ttatttgcaggttttaacacaagtgtt--catcatgataaacgtttatgtataagctatttatatagcaaagat 162  Q
    |||||| ||| || || ||||||||||  ||||||||||| ||  ||||||| |||||||||||||||||||||    
T  32420077 ttatttacagcttatagcacaagtgttatcatcatgataagcgcctatgtattagctatttatatagcaaagat 32420150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 119 - 180
Target Start/End: Complemental strand, 42420439 - 42420377
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgt 180  Q
    |||||||||| || ||| ||||||||||||| |||||| |||||| |||||| ||||||||||    
T  42420439 atcatgataagcgcttacgtataagctatttttatagcaaaagataaaataacgttaaattgt 42420377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 173 - 234
Target Start/End: Original strand, 680483 - 680544
Alignment:
Q  173 taaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||||| | | ||||||||||||||||||||| ||| |||||||  ||||||| ||||||    
T  680483 taaattgttttcgtataagctataagctattttcataagctatcttgaagaacttgtgaaaa 680544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 230
Target Start/End: Complemental strand, 22681291 - 22681218
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    |||||| ||| ||||  ||||||| | ||||||||||||||||| ||||| ||| ||||| | |||||||||||    
T  22681291 aaagataaaacaaagccaaattgttttcatataagctataagctgttttcataatctatcctagagaacttatg 22681218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 264
Target Start/End: Complemental strand, 29316880 - 29316771
Alignment:
Q  158 aagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaac 253  Q
    ||||| |||||| |||||||||| | || |||| ||||||||| ||||| | | ||||||| ||||||||||| |||    ||||||| ||| |||||||    
T  29316880 aagataaaataaggttaaattgttttcacataatctataagctgttttcatcagctatcttggagaacttatggaaataagctgaaaagaacttatgaac 29316781  T
Q  254 aatgtcataag 264  Q
     ||||||||||    
T  29316780 -atgtcataag 29316771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 200
Target Start/End: Original strand, 29430693 - 29430762
Alignment:
Q  131 gtttatgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagct 200  Q
    ||||||||||||||||||| |||| ||||  | ||||||||| ||| ||| | | |||||||||||||||    
T  29430693 gtttatgtataagctatttctataacaaaagttaaataaagtcaaactgttttcttataagctataagct 29430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 30537660 - 30537575
Alignment:
Q  131 gtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactat 215  Q
    |||||| | |||||||||| |||| | |||||||| ||||||| |||  || | |||||||||||||||||||| |||||| ||||    
T  30537660 gtttatatgtaagctatttctataactaaagatcatataaagtcaaacagttttcatataagctataagctattctcgtaagctat 30537575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Original strand, 44600478 - 44600541
Alignment:
Q  133 ttatgtataagctatttatatagc---aaagatcaaataaagttaaattgtgtacatataagct 193  Q
    ||||||||||||||||| ||||||   |||||| |||||||||||||| || | ||||||||||    
T  44600478 ttatgtataagctatttctatagccaaaaagataaaataaagttaaatagttttcatataagct 44600541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 4026742 - 4026802
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaatt 178  Q
    ||||||||||  | |||| |||||||||||| |||||| |||||| |||||||||||||||    
T  4026742 atcatgataagtgcttatctataagctatttttatagcaaaagataaaataaagttaaatt 4026802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 32614972 - 32614929
Alignment:
Q  235 ctgaaaacaacctatgaacaatgtcataagtcgtttttataagtt 279  Q
    ||||||||||| |||||||| |||||||||| |||||||||||||    
T  32614972 ctgaaaacaacatatgaaca-tgtcataagttgtttttataagtt 32614929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 39567828 - 39567916
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    |||||||||| |  || |||||||| ||||| |||| |||| ||| ||||||||||||||||| |  | |||||||||||||| |||||    
T  39567828 atcatgataagcacttgtgtataagatatttctataacaaaagataaaataaagttaaattgtttcaagataagctataagctgttttc 39567916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 75 - 264
Target Start/End: Complemental strand, 402730 - 402537
Alignment:
Q  75 tgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagtt 173  Q
    |||||| || |||||||||||||||| |  || |||||||| | ||||||||||  | ||||||||||||||||| ||||| ||| ||| || |||| ||    
T  402730 tgtttgaacaaacaacttatttgcagctcatagcacaagtgcttatcatgataagggcttatgtataagctatttctatagaaaaagat-aattaaattt 402632  T
Q  174 aaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataag 264  Q
    ||||||| | | |||||| |||||||| ||||  ||| |||||||  ||||||| |||||     ||||||||| | ||||||||||||||||||    
T  402631 aaattgttttcgtataagttataagctgtttttataatctatcttgaagaacttgtgaaattaagctgaaaacagcttatgaacaatgtcataag 402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 234
Target Start/End: Complemental strand, 39602340 - 39602239
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||| ||||||||||| ||||| ||| ||| | ||||||||||||||| | | |||||| |||||||| ||||| ||| ||||||||||||||||||||    
T  39602340 ttatgcataagctatttctatagaaaaagataacataaagttaaattgt-tgcgtataagttataagctgttttcataagctatctttgagaacttatga 39602242  T
Q  232 aaa 234  Q
    |||    
T  39602241 aaa 39602239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 133 - 279
Target Start/End: Original strand, 21367611 - 21367757
Alignment:
Q  133 ttatgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaa 232  Q
    ||||||||||| ||| | |||||||||    ||||||||||||||||| | | |||||  |||||| | ||||| ||| ||||||| |||||||||||||    
T  21367611 ttatgtataagatatctctatagcaaa----aaataaagttaaattgttttcgtataatgtataagttgttttcataagctatcttggagaacttatgaa 21367706  T
Q  233 aa----ctgaaaacaacctatgaacaatgtcataagtcgtttttataagtt 279  Q
    ||    ||||||||| | | ||||||||||||||||  ||||| |||||||    
T  21367707 aataagctgaaaacagcttgtgaacaatgtcataagctgttttcataagtt 21367757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 144 - 233
Target Start/End: Complemental strand, 33405287 - 33405197
Alignment:
Q  144 ctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaa 233  Q
    |||||| ||||||||| | | |||||||||||| |||| | ||||||||||||||||| ||||| ||| |||||||  |||||||||||||    
T  33405287 ctatttctatagcaaaaggtaaaataaagttaatttgttttcatataagctataagctgttttcataagctatcttgaagaacttatgaaa 33405197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 188 - 234
Target Start/End: Complemental strand, 28622074 - 28622028
Alignment:
Q  188 taagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||||||| ||||| ||||||||||| |||||||||||||||    
T  28622074 taagctataagctgttttcataaactatcttcgagaacttatgaaaa 28622028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 85 - 206
Target Start/End: Complemental strand, 30669149 - 30669027
Alignment:
Q  85 aacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgta 183  Q
    ||||||||||||| || |  |||||||| |||| ||||| || || ||||||||||||||||||| |||| | |||||| |||||| ||| |||| | |     
T  30669149 aacaacttatttgtagttgataacacaattgtttatcataattaatgtttatgtataagctatttttataacaaaagataaaataatgttgaattttttt 30669050  T
Q  184 catataagctataagctattttc 206  Q
    | ||||| |||||| ||||||||    
T  30669049 cttataaactataatctattttc 30669027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 233
Target Start/End: Complemental strand, 44061151 - 44061053
Alignment:
Q  136 tgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaa 233  Q
    |||||||||||||| ||||||||| ||| |||||| |||||||||| |   ||||||||||||| | ||||| ||   |||||| ||||||||||||||    
T  44061151 tgtataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttgttttcatatgatatcttagagaacttatgaaa 44061053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 1217899 - 1217830
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaa 233  Q
    |||| |||||||||||| | ||| |||| |||||||| ||||| ||| ||||| ||||||||||||||||    
T  1217899 aaatgaagttaaattgttttcatgtaagttataagctgttttcataagctatccttgagaacttatgaaa 1217830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 102 - 234
Target Start/End: Original strand, 14145820 - 14145953
Alignment:
Q  102 ttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagca-aagatcaaataaagttaaattgtgtacatataagctataagct 200  Q
    |||||||| ||||| | ||||||| ||| | |  ||||||||| | || |||| || ||||| ||||||||||||||||| | | |||| |||||||| |    
T  14145820 ttttaacataagtgcttatcatgacaaatgctcttgtataagcaagttttataacagaagataaaataaagttaaattgttttcgtatatgctataagtt 14145919  T
Q  201 attttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| ||| ||||||| ||  |||||||||||    
T  14145920 attttcataagctatcttggattacttatgaaaa 14145953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 180
Target Start/End: Complemental strand, 2128390 - 2128334
Alignment:
Q  125 ataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaattgt 180  Q
    |||| |||||||||||||||||||| |||| | |||||| |||||||||||||||||    
T  2128390 ataagcgtttatgtataagctatttctataacaaaagataaaataaagttaaattgt 2128334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 30956751 - 30956659
Alignment:
Q  139 ataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| |   |||| |||||||| | |||||  || ||||||| |||||||||||    
T  30956751 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30956659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 139 - 230
Target Start/End: Complemental strand, 30972563 - 30972471
Alignment:
Q  139 ataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    ||||||||||| ||||||||| ||| ||||||||||||||||| |   |||| |||||||| | |||||  || ||||||| |||||||||||    
T  30972563 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgtataggctataagttgttttcaaaagctatcttggagaacttatg 30972471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 158 - 197
Target Start/End: Original strand, 21574456 - 21574495
Alignment:
Q  158 aagatcaaataaagttaaattgtgtacatataagctataa 197  Q
    ||||| ||||||||||||||||| ||||||||||||||||    
T  21574456 aagataaaataaagttaaattgtttacatataagctataa 21574495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 36783480 - 36783365
Alignment:
Q  119 atcatgataaacgtttatgtat-aagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    ||||||||||  |||||||||| ||||||||| |||| | |||||| ||||||||| ||||||| | ||||||| |||| |||| ||||| ||| ||||     
T  36783480 atcatgataagtgtttatgtataaagctatttctataccaaaagataaaataaagtaaaattgttttcatataaactattagctgttttcataagctata 36783381  T
Q  217 tttgagaacttatgaa 232  Q
    || ||| | |||||||    
T  36783380 ttggagcaattatgaa 36783365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 20192737 - 20192659
Alignment:
Q  133 ttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaa 210  Q
    |||||||||||||||||||||| | |||||| ||||||||| |||  || | ||||||| ||||||||| |||| ||||    
T  20192737 ttatgtataagctatttatataacaaaagataaaataaagtcaaacagttttcatataatctataagctgtttttgtaa 20192659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 135 - 216
Target Start/End: Original strand, 22232767 - 22232849
Alignment:
Q  135 atgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||||||||||||||||| |||| ||| ||||||||| ||| ||| | ||||||||   |||||||||||| ||| |||||    
T  22232767 atgtataagctatttatataacaaatgataaaataaagtcaaactgttttcatataagtcgtaagctattttcataagctatc 22232849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 137 - 206
Target Start/End: Original strand, 52618946 - 52619016
Alignment:
Q  137 gtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    ||||||||||||| || | |||| ||| ||||||||||||||||| | |||||||| |||||||| |||||    
T  52618946 gtataagctatttctaaaacaaatgattaaataaagttaaattgttttcatataagttataagctgttttc 52619016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 230
Target Start/End: Complemental strand, 24887409 - 24887316
Alignment:
Q  138 tataagctatttatatagcaa-agatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    |||||||||||| |||| ||| |||| ||||||||| ||| ||| | ||||||||||| ||||| ||||| ||| ||||| | |||| ||||||    
T  24887409 tataagctatttctataacaatagataaaataaagtcaaactgtattcatataagctaaaagctgttttcataagctatcctggagagcttatg 24887316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 32703069 - 32703142
Alignment:
Q  125 ataaacgtttatgtataagctatttata-tagcaaagatcaaataaagttaaattgtgtacatataagctataa 197  Q
    ||||| ||||||||||||||||||| || ||  |||||| ||||||| | ||||||| | ||||||||||||||    
T  32703069 ataaatgtttatgtataagctatttctattataaaagataaaataaactcaaattgttttcatataagctataa 32703142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 37689509 - 37689432
Alignment:
Q  139 ataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactat 215  Q
    ||||||||||| |||| |||| ||| || |||||||||||| | | |||||||||||||| |||||||| ||| ||||    
T  37689509 ataagctatttttataacaaaagataaagtaaagttaaattattttcatataagctataaactattttcataagctat 37689432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 119 - 262
Target Start/End: Original strand, 46030913 - 46031063
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatag-caaagatcaaataaagtt-aaattg-tgtacatataagctataagctattttcgtaaactat 215  Q
    ||||||||||||  |||| ||||||||||||  ||||  |||||| |||||||||| |||||| | | ||||||| || |||||| |||   ||||||||    
T  46030913 atcatgataaacacttatatataagctatttcgatagaaaaagataaaataaagttaaaattgttttccatataacctgtaagctgtttcaataaactat 46031012  T
Q  216 ctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcata 262  Q
    ||| |||||||||| ||||    ||||||||| | |||||| |||||||||    
T  46031013 cttggagaacttattaaaataagctgaaaacagcttatgaataatgtcata 46031063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 191 - 279
Target Start/End: Complemental strand, 46778262 - 46778171
Alignment:
Q  191 gctataagctattttcgtaaactatctttgagaacttatga---aaactgaaaacaacctatgaacaatgtcataagtcgtttttataagtt 279  Q
    ||||||| || ||||| ||||||||||| || |||||||||   || ||||| | ||| |||||| |||||||||||| ||||| |||||||    
T  46778262 gctataaactgttttcataaactatcttggacaacttatgaaataagctgaacaaaacttatgaaaaatgtcataagttgttttcataagtt 46778171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 174 - 264
Target Start/End: Complemental strand, 52440751 - 52440658
Alignment:
Q  174 aaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataag 264  Q
    ||||||| | || |||||||||||||||||||| |||  ||||||  ||||||||||||||     |||||||||| ||||||| ||||||||||    
T  52440751 aaattgttttcaaataagctataagctattttcataatttatcttgaagaacttatgaaaattagttgaaaacaacttatgaac-atgtcataag 52440658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 30574057 - 30574002
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaagatcaaataaagttaa 175  Q
    |||||||||| || ||||||||||||||||| ||||  |||||| ||||||||||||    
T  30574057 atcatgataagcgcttatgtataagctatttctata-aaaagataaaataaagttaa 30574002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 45; Significance: 2e-16; HSPs: 18)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 73 - 234
Target Start/End: Original strand, 34236041 - 34236203
Alignment:
Q  73 cctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa--gatcaaataaa 170  Q
    ||||||||||  |||||||||||||||| || ||||||||  | | |||||||||| |  ||||| |||||| |||| || | ||||  ||| |||||||    
T  34236041 cctgtttggataaacaacttatttgcagcttataacacaaacggttatcatgataagcccttatggataagcaatttctacaacaaaaagataaaataaa 34236140  T
Q  171 gttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| ||| |   ||| || |||||||| ||||||||||||||||| |||||||||||||||    
T  34236141 gttaaactgttttg-tatgagttataagctgttttcgtaaactatcttggagaacttatgaaaa 34236203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 3936788 - 3936890
Alignment:
Q  133 ttatgtataagctatttatatagcaaag-atcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    |||||||||| |||||| |||| ||||| || |||||||| |||||||| | | ||||||||||||||| ||||||||| ||| |||  || ||||||||    
T  3936788 ttatgtataatctatttctataacaaaggataaaataaagctaaattgtcttcctataagctataagctgttttcgtaagctaacttgaagcacttatga 3936887  T
Q  232 aaa 234  Q
    |||    
T  3936888 aaa 3936890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 75 - 279
Target Start/End: Original strand, 10120638 - 10120846
Alignment:
Q  75 tgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatt-tatatagc-aaagatcaaataaagt 172  Q
    ||||| |||||||| ||||||||||| || || || ||| |||  |||||||||  | |||| ||||||||||| |||||||| |||||| ||||  |||    
T  10120638 tgttttgacgaacagcttatttgcagcttatagcataagcgtttctcatgataagtgcttatctataagctattctatatagcaaaagattaaat--agt 10120735  T
Q  173 taaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataagtcgt 268  Q
    |||||||| |   ||||| ||||||||| ||| | | |||||| || |||||||||||||||    ||||||||| | |||||  |||||||||||  ||    
T  10120736 taaattgttttggtataacctataagctgtttacattaactatattggagaacttatgaaaataagctgaaaacagcatatgataaatgtcataagctgt 10120835  T
Q  269 ttttataagtt 279  Q
    ||| |||||||    
T  10120836 tttcataagtt 10120846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 279
Target Start/End: Original strand, 10114429 - 10114579
Alignment:
Q  133 ttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||||||||||||||| |||||| |||||| |||| ||||| |||||| |   ||||||||||||||| ||||| | | |||| || |||||| |||||    
T  10114429 ttatgtataagctatttctatagcaaaagataaaat-aagttgaattgttttggtataagctataagctgttttcattagctatattggagaacatatga 10114527  T
Q  232 aaa----ctgaaaacaacctatgaacaatgtcataagtcgtttttataagtt 279  Q
    |||    ||||||||| | |||||  ||||| |||||| ||||| |||||||    
T  10114528 aaataagctgaaaacagcatatgataaatgttataagttgttttcataagtt 10114579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 74 - 234
Target Start/End: Complemental strand, 37353439 - 37353278
Alignment:
Q  74 ctgtttggacgaacaactt-atttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaag 171  Q
    |||||||||  |||||||| |||||||| || || || || || | || ||||||| || ||||||| || |||||| |||| |||| ||| ||||||||    
T  37353439 ctgtttggataaacaacttgatttgcagcttatagcataaatgcttatgatgataagcgcttatgtacaaactatttctataacaaaagat-aaataaag 37353341  T
Q  172 ttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||| |   | || |||||||||| ||||| ||| |||||||||||| ||||||||||    
T  37353340 ttaaattgtttttgtgtatgctataagctgttttcttaagctatctttgagagcttatgaaaa 37353278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 131 - 230
Target Start/End: Original strand, 4558735 - 4558835
Alignment:
Q  131 gtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttat 229  Q
    ||||||||||||||||||| ||||  ||| ||| ||||||||||||||| | | |||||| |||||||||| ||| | ||| ||||| | |||| |||||    
T  4558735 gtttatgtataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataagctgtttccataagctatcctagagagcttat 4558834  T
Q  230 g 230  Q
    |    
T  4558835 g 4558835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 16211015 - 16210951
Alignment:
Q  135 atgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataag 198  Q
    ||||||||||||||| ||||| ||| ||| ||||||||||| ||||| | |||||||||||||||    
T  16211015 atgtataagctatttctatagtaaatgataaaataaagttacattgttttcatataagctataag 16210951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 235 - 279
Target Start/End: Complemental strand, 32841010 - 32840966
Alignment:
Q  235 ctgaaaacaacctatgaacaatgtcataagtcgtttttataagtt 279  Q
    ||||||||||| ||||||||||||||||||| ||||| |||||||    
T  32841010 ctgaaaacaacttatgaacaatgtcataagttgttttcataagtt 32840966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 7514517 - 7514600
Alignment:
Q  133 ttatgtataagctatttatatagcaaaga-tcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactat 215  Q
    ||||||||||||||||| ||||||||| | | |||||| ||| |||||| | ||||||||||| ||||| ||||| ||| ||||    
T  7514517 ttatgtataagctatttctatagcaaaaactaaaataatgttcaattgttttcatataagctacaagctgttttcataagctat 7514600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 85 - 263
Target Start/End: Complemental strand, 9956991 - 9956810
Alignment:
Q  85 aacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgta 183  Q
    ||||||||||||| || || || ||||||   | ||||||||| ||| |||||| | |||||||| |||| |||| ||| ||||||||||  ||| |       
T  9956991 aacaacttatttgtagcttatagcacaagcacttatcatgatacacgcttatgtttgagctatttctataacaaaagataaaataaagttttattttt-- 9956894  T
Q  184 catataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataa 263  Q
    | |||||| |||||| | ||||| ||| ||||||| |||||||||||||||    |||||||| || ||||||||||| |||||    
T  9956893 cctataagttataagttgttttcataatctatcttggagaacttatgaaaataagctgaaaactacttatgaacaatgccataa 9956810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 216
Target Start/End: Complemental strand, 29592638 - 29592579
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    |||||| ||||||||| ||||||| | | ||||||||||||||| ||||||||| |||||    
T  29592638 aaagataaaataaagtaaaattgtttccttataagctataagctgttttcgtaagctatc 29592579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 35374493 - 35374439
Alignment:
Q  144 ctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataa 197  Q
    |||||| |||||| |||||| ||||||||||||||||| | ||||||||||||||    
T  35374493 ctatttctatagcgaaagataaaataaagttaaattgttttcatataagctataa 35374439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 195
Target Start/End: Complemental strand, 14280542 - 14280469
Alignment:
Q  123 tgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctat 195  Q
    |||||| || |||||||||| |||||| ||||||||| ||| |||| || ||||||||| | ||||||||||||    
T  14280542 tgataagcgcttatgtataacctatttctatagcaaaagataaaattaaattaaattgttttcatataagctat 14280469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 176
Target Start/End: Original strand, 26215374 - 26215479
Alignment:
Q  72 ccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaa 170  Q
    ||||||||| |  |||||||||||| ||| || || ||| || | | || ||||||| || ||||||||||||||||| |||| | |||||| |||||||    
T  26215374 ccctgtttgtataaacaacttattttcagcttatagcacgagcgcttataatgataagcgcttatgtataagctatttctataacaaaagataaaataaa 26215473  T
Q  171 gttaaa 176  Q
    ||||||    
T  26215474 gttaaa 26215479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 233
Target Start/End: Complemental strand, 31804553 - 31804484
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaa 233  Q
    ||||||||||||||||| | | |||||| |||||||  ||||| | | |||||||||||| |||||||||    
T  31804553 aaataaagttaaattgttttcctataagttataagcagttttcatgagctatctttgagagcttatgaaa 31804484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 233
Target Start/End: Original strand, 29205772 - 29205848
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaa 233  Q
    |||||| |||| |||||||||||| |   |||| |||||||| ||||||| |||||||| || ||||| ||||||||    
T  29205772 aaagataaaatgaagttaaattgtttttgtatatgctataagttattttcataaactattttggagaatttatgaaa 29205848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 36338339 - 36338291
Alignment:
Q  186 tataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    |||||| |||||||| ||||  |||| ||||||||||||||||||||||    
T  36338339 tataagatataagctgtttttataaaatatctttgagaacttatgaaaa 36338291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 157 - 197
Target Start/End: Complemental strand, 42237528 - 42237488
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataa 197  Q
    |||||| ||||||||||||||||| | ||||||||||||||    
T  42237528 aaagataaaataaagttaaattgttttcatataagctataa 42237488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 2294850 - 2294952
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||| ||||| ||||| ||||| ||| ||||| ||||||||||||||| |    |||||||||||||||||||| ||||||||||| ||||||||| ||    
T  2294850 ttatgaataaggtatttttataggaaatgatcatataaagttaaattgtttttggataagctataagctattttcataaactatcttggagaacttacga 2294949  T
Q  232 aaa 234  Q
    |||    
T  2294950 aaa 2294952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 9572303 - 9572141
Alignment:
Q  69 aggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctatttatatagc-aaagatcaaat 167  Q
    |||||||||||| | ||| ||||||||||||| || || ||||||||   |||||||| | || | |||||| |||||||| |||||| |||||| ||||    
T  9572303 aggccctgtttgaatgaataacttatttgcagcttatagcacaagtgcctatcatgatcagcgctaatgtattagctatttctatagcaaaagataaaat 9572204  T
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    ||||||||||||  |   ||||||||||||||  ||||| ||  | ||| |||||||||||||    
T  9572203 aaagttaaattgcttttgtataagctataagccgttttcatatgccatcattgagaacttatg 9572141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 72 - 264
Target Start/End: Complemental strand, 27820532 - 27820332
Alignment:
Q  72 ccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacg----tttatgtataagctatttatatagcaaagatcaaat 167  Q
    |||||||||||  |||||||||||||||| || || || ||| | | ||||||||||  |    ||| |||||||||||||| ||||| ||| || ||||    
T  27820532 ccctgtttggataaacaacttatttgcagcttatagcataagcgcttatcatgataagggcttgtttgtgtataagctatttttatagtaaatataaaat 27820433  T
Q  168 aaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataa 263  Q
    |||| |||||||| ||  ||||||||||| ||| ||||  ||| ||||||| ||||| |||||||||    ||||||| | | ||||||||||||| |||    
T  27820432 aaagctaaattgtttatgtataagctatatgctgtttttataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaacaatgtcgtaa 27820333  T
Q  264 g 264  Q
    |    
T  27820332 g 27820332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 37842485 - 37842384
Alignment:
Q  134 tatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaa 232  Q
    |||||||||||||||| ||||||||| ||| ||||||||||||| ||||| |  |||||||||||| | ||||| ||| |||||||  ||||||||| ||    
T  37842485 tatgtataagctatttctatagcaaaagatgaaataaagttaaactgtgttcgaataagctataagttgttttcataagctatcttgaagaacttataaa 37842386  T
Q  233 aa 234  Q
    ||    
T  37842385 aa 37842384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 31517846 - 31517721
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaa 252  Q
    |||||| ||||||||||||||||  | ||||||||||||||||| | ||| ||| || |||| |||| ||||||||||    ||||||||| | ||||||    
T  31517846 aaagataaaataaagttaaattgatttcatataagctataagctgtcttcataatctgtcttggagagcttatgaaaataagctgaaaacagcttatgaa 31517747  T
Q  253 caatgtcataagtcgtttttataagtt 279  Q
    | ||||||| ||| ||||| |||||||    
T  31517746 c-atgtcatgagttgttttgataagtt 31517721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 76 - 145
Target Start/End: Complemental strand, 33541906 - 33541837
Alignment:
Q  76 gtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagct 145  Q
    |||||||  |||||||||||||||| || || |||||||||| |||||||||| || |||||||||||||    
T  33541906 gtttggataaacaacttatttgcagtttatagcacaagtgtttatcatgataagcgcttatgtataagct 33541837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 149
Target Start/End: Complemental strand, 47499039 - 47498958
Alignment:
Q  68 caggccctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctattt 149  Q
    ||||| |||||||||  |||||||||||||||| || || |||||||| | |||||||||| || || ||||||||||||||    
T  47499039 caggcactgtttggataaacaacttatttgcagcttatagcacaagtgcttatcatgataagcgcttgtgtataagctattt 47498958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 134 - 233
Target Start/End: Original strand, 1432455 - 1432555
Alignment:
Q  134 tatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaa 232  Q
    |||||||||||||||| ||||| ||| ||| ||||| |||| |||||| |   ||||||||||||  | ||||| ||||||||||| |||||||||||||    
T  1432455 tatgtataagctatttctatagtaaaagataaaatagagttcaattgtttttttataagctataaattgttttcataaactatcttggagaacttatgaa 1432554  T
Q  233 a 233  Q
    |    
T  1432555 a 1432555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 38116330 - 38116257
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaagatcaaataaagttaaattgtgtacatataagcta 194  Q
    |||||||||| || |||||||||||||||||  ||||||||||| ||||  ||||||||||||| | |||||||||    
T  38116330 atcatgataagcgcttatgtataagctatttcaatagcaaagataaaat--agttaaattgtgttcgtataagcta 38116257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 133 - 288
Target Start/End: Complemental strand, 27145866 - 27145707
Alignment:
Q  133 ttatgtataagctatttatatagcaa-agatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||||||||||||||| || | ||| |||| ||||||| ||||||| | | | |||||  |||||| ||| ||| | || ||||||  |||||||||||    
T  27145866 ttatgtataagctatttctacaacaacagataaaataaatttaaattattttcgtataatttataagttatcttcattaaatatcttgaagaacttatga 27145767  T
Q  232 aaa----ctgaaaacaacctatgaacaatgtcataagtcgtttttataagttttttcaaaa 288  Q
    |||    ||||||| ||| |||||||||||||||||||||||||  |||||| || |||||    
T  27145766 aaataagctgaaaa-aacttatgaacaatgtcataagtcgttttcttaagttcttccaaaa 27145707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 234
Target Start/End: Complemental strand, 7218173 - 7218103
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||| ||||||| | ||||||||||||||| | ||||| ||| ||||| | |||||||||||||||    
T  7218173 aaataaagtcaaattgttttcatataagctataagttgttttcataacctatcctggagaacttatgaaaa 7218103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 141 - 234
Target Start/End: Original strand, 10280596 - 10280690
Alignment:
Q  141 aagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||||||| |||| |||| ||| || ||||||||| |||| | ||||||| ||| | ||||||||||||| |||||||  ||||||||||||||    
T  10280596 aagctatttctataacaaaagataaagtaaagttaagttgtttccatataacctacaggctattttcgtaagctatcttcaagaacttatgaaaa 10280690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 202
Target Start/End: Complemental strand, 43722446 - 43722376
Alignment:
Q  133 ttatgtataagctatttatatagca-aagatcaaataaagttaaattgtgtacatataagctataagctat 202  Q
    |||||||||||||||||||||| || ||||| |||||||||| |||||  | | |||||||||||||||||    
T  43722446 ttatgtataagctatttatataacagaagataaaataaagttcaattggttccgtataagctataagctat 43722376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 234
Target Start/End: Original strand, 49888706 - 49888808
Alignment:
Q  133 ttatgtataagctatttatatag-caaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatga 231  Q
    ||||||||||||||||| | | |  |||||| |||||||||| |||||| | | |||||||||| || | ||||| ||| ||||||| ||||||||||||    
T  49888706 ttatgtataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatga 49888805  T
Q  232 aaa 234  Q
    |||    
T  49888806 aaa 49888808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 135 - 276
Target Start/End: Original strand, 3224364 - 3224509
Alignment:
Q  135 atgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaa 233  Q
    |||||||||||||||||||| |||| |||||| |||||| ||||||  | ||||||||||||| | | ||||  ||| ||||  | ||||||||||||||    
T  3224364 atgtataagctatttatataacaaaggatcaagtaaagtcaaattgaattcatataagctatagggtgtttttataagctattctagagaacttatgaaa 3224463  T
Q  234 a----ctgaaaacaacctatgaacaatgtcataagtcgtttttataa 276  Q
    |    |||| |||||| |||| || ||||||||||| |||| |||||    
T  3224464 ataagctgagaacaacttatggac-atgtcataagtagtttgtataa 3224509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 139 - 276
Target Start/End: Complemental strand, 24915176 - 24915034
Alignment:
Q  139 ataagctatttatatagca-aagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa--- 234  Q
    |||| |||||| ||||||| ||||| ||||||||||||||||| |   |||| |||||||||| ||||| ||| || |||| |||||||| ||||||       
T  24915176 ataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtgaaaataa 24915077  T
Q  235 -ctgaaaacaacctatgaacaatgtcataagtcgtttttataa 276  Q
      |||||| | | |||||| |||||||||||| ||||| ||||    
T  24915076 gttgaaaaaagcttatgaaaaatgtcataagttgttttcataa 24915034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 149
Target Start/End: Complemental strand, 5894354 - 5894278
Alignment:
Q  73 cctgtttggacgaacaacttatttgcaggttttaacacaagtgttcatcatgataaacgtttatgtataagctattt 149  Q
    ||||||||||  |||| |||||||| || || || |||||||| | |||||||||| || |||||||||||||||||    
T  5894354 cctgtttggataaacagcttatttgaagcttatagcacaagtgcttatcatgataagcgcttatgtataagctattt 5894278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 157 - 254
Target Start/End: Complemental strand, 14630074 - 14629971
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatata--agctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatg 250  Q
    |||||| ||||||||||| | ||| ||||||||  ||||||||||||||||| ||| ||||||| ||||  ||||| |||    ||||||||||| ||||    
T  14630074 aaagataaaataaagttacactgtttacatatataagctataagctattttcataagctatcttggagactttatggaaataagctgaaaacaacttatg 14629975  T
Q  251 aaca 254  Q
    ||||    
T  14629974 aaca 14629971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 119 - 232
Target Start/End: Complemental strand, 23544785 - 23544670
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatag-caaagatcaaataaagttaaattgtgtacatataagcta-taagctattttcgtaaactatc 216  Q
    |||||||||| || ||||||||||||||||| ||| |  |||||| |||| |||| ||||||| | ||||||||||| ||| || ||||| ||| |||||    
T  23544785 atcatgataagcgcttatgtataagctatttctatggaaaaagataaaattaagtcaaattgttttcatataagctattaaactgttttcataagctatc 23544686  T
Q  217 tttgagaacttatgaa 232  Q
    |  || ||||||||||    
T  23544685 tcggaaaacttatgaa 23544670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 133 - 180
Target Start/End: Complemental strand, 48748713 - 48748666
Alignment:
Q  133 ttatgtataagctatttatatagcaaagatcaaataaagttaaattgt 180  Q
    ||||||||||||||||| ||||  |||||| |||||||||||||||||    
T  48748713 ttatgtataagctatttctatacaaaagatgaaataaagttaaattgt 48748666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 193 - 264
Target Start/End: Original strand, 6292493 - 6292567
Alignment:
Q  193 tataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcataag 264  Q
    ||||||||||||||||||||||| || |||| ||||||||||    ||||||||| | ||||||| ||||||||||    
T  6292493 tataagctattttcgtaaactattttggagagcttatgaaaataagctgaaaacagcttatgaac-atgtcataag 6292567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 186 - 265
Target Start/End: Original strand, 7069294 - 7069377
Alignment:
Q  186 tataagctataagctattttcgtaaactatctttgagaacttatgaa----aactgaaaacaacctatgaacaatgtcataagt 265  Q
    |||||||||||||||  ||| |||| ||||||| |||||||||||||    || | |||||||  |||||||||||||||||||    
T  7069294 tataagctataagctgcttttgtaagctatcttggagaacttatgaaaatgaattaaaaacaaattatgaacaatgtcataagt 7069377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 184 - 230
Target Start/End: Original strand, 33759561 - 33759607
Alignment:
Q  184 catataagctataagctattttcgtaaactatctttgagaacttatg 230  Q
    |||||| | |||||||||||||||||||||||||| |||| ||||||    
T  33759561 catatatgttataagctattttcgtaaactatcttggagatcttatg 33759607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 229
Target Start/End: Complemental strand, 25006133 - 25006068
Alignment:
Q  164 aaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttat 229  Q
    ||||||||| ||||||| | ||||||||||||||| | ||||| ||| ||||||| |||| |||||    
T  25006133 aaataaagtcaaattgttttcatataagctataagttgttttcataagctatcttggagatcttat 25006068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 186 - 252
Target Start/End: Original strand, 34290229 - 34290299
Alignment:
Q  186 tataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaa 252  Q
    ||||||||||||||| ||||| ||| |||||||  ||||||||||||||    ||||||||||| ||||||    
T  34290229 tataagctataagctgttttcataagctatcttgaagaacttatgaaaataagctgaaaacaacttatgaa 34290299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 134 - 234
Target Start/End: Original strand, 34952155 - 34952256
Alignment:
Q  134 tatgtataagctatttatatagca-aagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaa 232  Q
    |||||||||||||||| || |||| ||| | ||||||||||||||||| | |  ||||||| |||| | ||||| ||| |||||   |||||||||||||    
T  34952155 tatgtataagctatttctagagcagaagttaaaataaagttaaattgttttcgaataagctgtaagttgttttcataagctatcaaagagaacttatgaa 34952254  T
Q  233 aa 234  Q
    ||    
T  34952255 aa 34952256  T

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Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 212 - 262
Target Start/End: Complemental strand, 38503516 - 38503462
Alignment:
Q  212 ctatctttgagaacttatgaaaa----ctgaaaacaacctatgaacaatgtcata 262  Q
    ||||||| |||||||||||||||    ||||||||||| ||||||||||||||||    
T  38503516 ctatcttggagaacttatgaaaataagctgaaaacaacttatgaacaatgtcata 38503462  T

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Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 157 - 279
Target Start/End: Complemental strand, 51695600 - 51695475
Alignment:
Q  157 aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctttgagaacttatgaaaa----ctgaaaacaacctatgaa 252  Q
    |||||| ||||||||| ||||||| | | |||||| ||| || | ||||| ||| ||||||| ||||| |||||||||    ||||||| | | ||||||    
T  51695600 aaagataaaataaagt-aaattgttttcgtataagttatcagatgttttcataagctatcttggagaatttatgaaaataagctgaaaatagcttatgaa 51695502  T
Q  253 caatgtcataagtcgtttttataagtt 279  Q
    |||||| |||||| |||| ||||||||    
T  51695501 caatgtgataagttgtttatataagtt 51695475  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 186 - 234
Target Start/End: Complemental strand, 7137075 - 7137027
Alignment:
Q  186 tataagctataagctattttcgtaaactatctttgagaacttatgaaaa 234  Q
    ||||| ||||||||| ||||| ||| ||||||| |||||||||||||||    
T  7137075 tataatctataagctgttttcataagctatcttggagaacttatgaaaa 7137027  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 133 - 216
Target Start/End: Original strand, 15579422 - 15579505
Alignment:
Q  133 ttatgtataagctatttatatagc-aaagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatc 216  Q
    ||||||||||||||||| |||| | |||| ||||||||| | ||||||| | ||| ||||||||||||| || |||||| |||||    
T  15579422 ttatgtataagctatttctataactaaagttcaaataaa-tcaaattgttttcatgtaagctataagctgttctcgtaagctatc 15579505  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 178
Target Start/End: Complemental strand, 27146393 - 27146333
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagc-aaagatcaaataaagttaaatt 178  Q
    |||||||||| |||||||||||||| ||||| || ||| |||||| ||||||| |||||||    
T  27146393 atcatgataagcgtttatgtataaggtatttctacagcaaaagataaaataaatttaaatt 27146333  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Complemental strand, 44032132 - 44032056
Alignment:
Q  131 gtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    ||||||||||||||  ||| |||| |||| | | ||||||||| ||||||| | |||||||||||||| ||||||||    
T  44032132 gtttatgtataagccgtttctataacaaaagctaaaataaagtcaaattgttttcatataagctataaactattttc 44032056  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 45990187 - 45990123
Alignment:
Q  135 atgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataag 198  Q
    ||||||| ||||||| |||| |||| ||| ||||||||| ||||||| | |||||||||||||||    
T  45990187 atgtatatgctatttttatatcaaaagataaaataaagtaaaattgttttcatataagctataag 45990123  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 131 - 206
Target Start/End: Original strand, 49517007 - 49517083
Alignment:
Q  131 gtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctattttc 206  Q
    |||| |||||||| ||||| |||| |||| ||| ||||||||| ||||||| | ||| ||||||||||||| |||||    
T  49517007 gtttgtgtataagttatttctataacaaaagataaaataaagtcaaattgttttcatttaagctataagctgttttc 49517083  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 51190786 - 51190870
Alignment:
Q  119 atcatgataaacgtttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagctataagctat 202  Q
    ||||||||||||  |||| || ||||||||| || |||||| ||| ||||||||||||||||| |   |||||| ||||||||||    
T  51190786 atcatgataaacacttatttaaaagctatttgtaaagcaaaagataaaataaagttaaattgtttttgtataagttataagctat 51190870  T

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Target: scaffold0024 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 218
Target Start/End: Original strand, 27515 - 27601
Alignment:
Q  133 ttatgtataagctatttatatagca-aagatcaaataaagttaaattgtgtacatataagctataagctattttcgtaaactatctt 218  Q
    ||||||||||| ||||| |||| || ||||| ||||||||| ||||||| | ||||||| ||||||| | ||||| |||||||||||    
T  27515 ttatgtataagttatttctataacagaagataaaataaagtcaaattgttttcatataaactataagttgttttcataaactatctt 27601  T

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Target: scaffold0024; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 193
Target Start/End: Complemental strand, 21409 - 21348
Alignment:
Q  133 ttatgtataagctatttatatagcaaa-gatcaaataaagttaaattgtgtacatataagct 193  Q
    ||||||||||||||||| ||||| ||| ||| ||||||||||||||||| | | ||||||||    
T  21409 ttatgtataagctatttttataggaaaagataaaataaagttaaattgttttcgtataagct 21348  T

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