View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF13987_low_15 (Length: 252)
Name: NF13987_low_15
Description: NF13987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF13987_low_15 |
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| [»] scaffold0050 (1 HSPs) |
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Alignment Details
Target: scaffold0050 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0050
Description:
Target: scaffold0050; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 72533 - 72596
Alignment:
| Q |
6 |
agtgagatgaacagcttcaagaaattataacattttatgtaaaaaatttcatcaagtaatgggg |
69 |
Q |
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| T |
72533 |
agtgacatgaacagcttcaagaaattataacatttcatgtaaaaattgtcatcaagtaatgggg |
72596 |
T |
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