View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13988_low_5 (Length: 450)

Name: NF13988_low_5
Description: NF13988
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13988_low_5
NF13988_low_5
[»] chr2 (42 HSPs)
chr2 (16-438)||(2325444-2325866)
chr2 (1-145)||(33551045-33551189)
chr2 (1-146)||(19424687-19424832)
chr2 (1-143)||(36641988-36642130)
chr2 (1-146)||(17071796-17071941)
chr2 (7-143)||(3176941-3177077)
chr2 (1-145)||(37905709-37905852)
chr2 (1-146)||(17054155-17054300)
chr2 (1-145)||(26357577-26357721)
chr2 (1-151)||(13711458-13711608)
chr2 (1-151)||(19289382-19289527)
chr2 (7-146)||(11366446-11366585)
chr2 (1-147)||(31570793-31570939)
chr2 (9-143)||(33660435-33660569)
chr2 (1-146)||(4264136-4264281)
chr2 (1-106)||(4478408-4478513)
chr2 (1-106)||(43648304-43648409)
chr2 (7-147)||(4166920-4167060)
chr2 (1-147)||(29242197-29242343)
chr2 (1-143)||(41463909-41464051)
chr2 (1-145)||(33902068-33902210)
chr2 (1-145)||(19313852-19313995)
chr2 (1-146)||(27349998-27350143)
chr2 (9-147)||(39167430-39167568)
chr2 (1-143)||(43770898-43771039)
chr2 (1-145)||(4763628-4763775)
chr2 (7-150)||(18494345-18494476)
chr2 (1-146)||(5881533-5881683)
chr2 (16-106)||(33709306-33709396)
chr2 (63-145)||(41465509-41465591)
chr2 (32-145)||(35958909-35959022)
chr2 (1-143)||(44285951-44286093)
chr2 (1-45)||(41051264-41051308)
chr2 (7-145)||(44913662-44913801)
chr2 (97-148)||(19093410-19093461)
chr2 (1-48)||(45327817-45327864)
chr2 (1-46)||(41960939-41960984)
chr2 (97-145)||(31861895-31861943)
chr2 (84-147)||(41960881-41960944)
chr2 (100-146)||(39788580-39788626)
chr2 (97-145)||(22963400-22963448)
chr2 (97-145)||(22998029-22998077)
[»] chr8 (37 HSPs)
chr8 (1-149)||(1204922-1205070)
chr8 (1-145)||(10555249-10555393)
chr8 (9-136)||(37970574-37970701)
chr8 (1-146)||(27082885-27083030)
chr8 (7-147)||(36695019-36695159)
chr8 (1-146)||(1150152-1150297)
chr8 (2-145)||(13307622-13307765)
chr8 (1-147)||(43643642-43643788)
chr8 (16-133)||(23854493-23854610)
chr8 (1-145)||(6098565-6098709)
chr8 (1-145)||(12876108-12876252)
chr8 (1-148)||(34894963-34895110)
chr8 (1-146)||(16446922-16447067)
chr8 (8-147)||(16222860-16222999)
chr8 (7-146)||(30654636-30654775)
chr8 (1-143)||(465843-465985)
chr8 (1-131)||(11727037-11727167)
chr8 (1-147)||(38643975-38644121)
chr8 (1-145)||(41362517-41362658)
chr8 (7-149)||(9864143-9864285)
chr8 (1-119)||(34952078-34952196)
chr8 (1-145)||(5299993-5300137)
chr8 (8-132)||(31933940-31934064)
chr8 (32-146)||(8803888-8803998)
chr8 (16-147)||(40862416-40862547)
chr8 (1-143)||(7891004-7891137)
chr8 (1-82)||(1149679-1149760)
chr8 (1-72)||(39099166-39099237)
chr8 (21-145)||(4133077-4133199)
chr8 (84-145)||(15009241-15009302)
chr8 (61-145)||(33906223-33906307)
chr8 (84-147)||(24823402-24823465)
chr8 (1-145)||(44869495-44869640)
chr8 (89-144)||(35459833-35459888)
chr8 (1-55)||(35459758-35459812)
chr8 (100-144)||(3858849-3858893)
chr8 (108-148)||(39099263-39099303)
[»] scaffold0291 (1 HSPs)
scaffold0291 (1-148)||(7884-8031)
[»] chr7 (47 HSPs)
chr7 (1-145)||(5657523-5657667)
chr7 (1-145)||(37346997-37347141)
chr7 (1-151)||(30055495-30055646)
chr7 (1-147)||(18797302-18797446)
chr7 (1-147)||(26524369-26524515)
chr7 (1-145)||(27283719-27283863)
chr7 (1-145)||(31520766-31520909)
chr7 (7-149)||(24211712-24211854)
chr7 (9-147)||(32821103-32821241)
chr7 (1-145)||(8861260-8861404)
chr7 (1-145)||(37109847-37109991)
chr7 (1-144)||(48928606-48928748)
chr7 (7-145)||(7334769-7334907)
chr7 (1-147)||(17842628-17842774)
chr7 (1-146)||(21991610-21991755)
chr7 (5-120)||(29173540-29173655)
chr7 (1-144)||(38258521-38258664)
chr7 (7-145)||(4582894-4583032)
chr7 (1-131)||(22687228-22687358)
chr7 (1-146)||(31579106-31579256)
chr7 (1-149)||(12390672-12390820)
chr7 (1-145)||(15612801-15612944)
chr7 (1-105)||(44413421-44413525)
chr7 (1-143)||(25691586-25691729)
chr7 (7-146)||(32432431-32432565)
chr7 (1-144)||(33688304-33688446)
chr7 (1-147)||(41765120-41765266)
chr7 (16-145)||(34362206-34362334)
chr7 (1-147)||(10481576-10481724)
chr7 (1-147)||(9355868-9356014)
chr7 (1-118)||(26980325-26980442)
chr7 (1-129)||(48928339-48928466)
chr7 (28-143)||(27421448-27421563)
chr7 (7-146)||(43686015-43686153)
chr7 (1-145)||(6546494-6546638)
chr7 (1-143)||(11071182-11071325)
chr7 (1-119)||(12165753-12165871)
chr7 (9-143)||(23111167-23111301)
chr7 (16-106)||(38053500-38053590)
chr7 (7-145)||(10359263-10359400)
chr7 (1-106)||(35353122-35353228)
chr7 (97-147)||(40381938-40381988)
chr7 (90-143)||(8299192-8299245)
chr7 (97-145)||(23402371-23402419)
chr7 (50-105)||(37704182-37704238)
chr7 (16-56)||(43925166-43925206)
chr7 (65-117)||(44598367-44598419)
[»] chr4 (55 HSPs)
chr4 (1-148)||(25701124-25701271)
chr4 (1-143)||(34948164-34948306)
chr4 (1-149)||(29584267-29584413)
chr4 (1-147)||(55477958-55478108)
chr4 (1-143)||(36493755-36493897)
chr4 (1-145)||(19089520-19089664)
chr4 (1-146)||(37663808-37663951)
chr4 (1-146)||(879615-879760)
chr4 (1-146)||(25184112-25184257)
chr4 (1-144)||(4597994-4598136)
chr4 (8-147)||(34361566-34361704)
chr4 (9-148)||(35021110-35021249)
chr4 (16-143)||(47253751-47253877)
chr4 (1-143)||(27396618-27396760)
chr4 (16-150)||(39397913-39398047)
chr4 (16-145)||(7703517-7703646)
chr4 (1-145)||(19440715-19440860)
chr4 (8-145)||(28003060-28003197)
chr4 (1-149)||(38011850-38011998)
chr4 (7-145)||(55241177-55241315)
chr4 (1-146)||(42199728-42199873)
chr4 (1-145)||(49375966-49376111)
chr4 (7-143)||(17167715-17167851)
chr4 (7-143)||(17173292-17173428)
chr4 (7-147)||(32912653-32912793)
chr4 (1-120)||(23761097-23761216)
chr4 (17-146)||(37287732-37287862)
chr4 (16-146)||(35025670-35025800)
chr4 (16-148)||(30002706-30002838)
chr4 (1-120)||(54499305-54499425)
chr4 (9-148)||(50764732-50764866)
chr4 (40-149)||(4205112-4205221)
chr4 (1-142)||(6864038-6864179)
chr4 (1-148)||(32579441-32579590)
chr4 (1-82)||(4934269-4934351)
chr4 (9-131)||(5048040-5048162)
chr4 (63-147)||(7152235-7152319)
chr4 (1-143)||(33341397-33341542)
chr4 (1-147)||(9139245-9139389)
chr4 (84-147)||(17272009-17272072)
chr4 (1-148)||(50697239-50697385)
chr4 (61-147)||(4396324-4396410)
chr4 (1-142)||(32592096-32592237)
chr4 (87-143)||(52516599-52516655)
chr4 (30-149)||(3042607-3042726)
chr4 (1-115)||(46888224-46888338)
chr4 (1-144)||(37775670-37775811)
chr4 (61-145)||(53124287-53124371)
chr4 (97-147)||(2704510-2704560)
chr4 (97-147)||(38812260-38812310)
chr4 (91-143)||(20097485-20097537)
chr4 (1-143)||(33816600-33816742)
chr4 (97-139)||(52195645-52195687)
chr4 (1-37)||(1815409-1815445)
chr4 (97-145)||(38811813-38811861)
[»] chr5 (56 HSPs)
chr5 (1-143)||(699152-699294)
chr5 (1-148)||(24886099-24886248)
chr5 (1-148)||(8741917-8742065)
chr5 (1-152)||(5112344-5112495)
chr5 (16-147)||(35826529-35826660)
chr5 (1-147)||(38528268-38528413)
chr5 (1-146)||(9200232-9200377)
chr5 (1-149)||(19119855-19120003)
chr5 (7-150)||(22974119-22974262)
chr5 (1-144)||(22980794-22980937)
chr5 (1-147)||(27330304-27330448)
chr5 (1-146)||(1429176-1429321)
chr5 (1-145)||(15724490-15724632)
chr5 (1-132)||(26268087-26268218)
chr5 (1-131)||(30969355-30969485)
chr5 (1-146)||(39572818-39572963)
chr5 (9-145)||(7693230-7693366)
chr5 (1-148)||(14919559-14919707)
chr5 (1-133)||(27318518-27318650)
chr5 (7-147)||(36860421-36860561)
chr5 (1-147)||(12910348-12910499)
chr5 (1-144)||(32563150-32563293)
chr5 (1-143)||(5837557-5837699)
chr5 (1-143)||(25500957-25501099)
chr5 (1-145)||(14409358-14409501)
chr5 (1-145)||(22019632-22019776)
chr5 (1-144)||(31705643-31705785)
chr5 (7-145)||(36866762-36866900)
chr5 (1-145)||(31786677-31786821)
chr5 (1-147)||(8466743-8466888)
chr5 (1-145)||(23116253-23116397)
chr5 (1-145)||(35511508-35511652)
chr5 (48-147)||(13956423-13956522)
chr5 (1-115)||(22255211-22255326)
chr5 (7-137)||(43308689-43308819)
chr5 (7-145)||(40133385-40133523)
chr5 (16-133)||(33908245-33908362)
chr5 (16-132)||(8436979-8437095)
chr5 (8-143)||(11898004-11898139)
chr5 (1-106)||(17158062-17158166)
chr5 (1-106)||(7208895-7208999)
chr5 (1-66)||(15992571-15992636)
chr5 (9-106)||(25668689-25668785)
chr5 (61-145)||(26317775-26317859)
chr5 (16-91)||(5829955-5830030)
chr5 (7-74)||(21088803-21088870)
chr5 (68-145)||(16004474-16004552)
chr5 (60-105)||(22255615-22255660)
chr5 (91-142)||(13380498-13380549)
chr5 (97-146)||(36055874-36055923)
chr5 (1-74)||(6824510-6824585)
chr5 (64-152)||(35933895-35933983)
chr5 (97-148)||(22616491-22616542)
chr5 (1-106)||(28416558-28416663)
chr5 (1-82)||(35504428-35504509)
chr5 (38-103)||(42342775-42342840)
[»] chr6 (19 HSPs)
chr6 (1-146)||(8513232-8513377)
chr6 (9-149)||(4318871-4319011)
chr6 (1-147)||(1945831-1945978)
chr6 (1-145)||(7235075-7235218)
chr6 (1-129)||(15491631-15491759)
chr6 (7-147)||(5627389-5627529)
chr6 (7-146)||(3879985-3880124)
chr6 (7-146)||(7055261-7055400)
chr6 (1-143)||(6088910-6089052)
chr6 (1-143)||(29182165-29182307)
chr6 (1-144)||(20768087-20768228)
chr6 (16-149)||(18498429-18498563)
chr6 (1-145)||(33618834-33618978)
chr6 (7-119)||(21017158-21017270)
chr6 (7-143)||(30353404-30353540)
chr6 (1-145)||(33893043-33893186)
chr6 (9-91)||(6091231-6091313)
chr6 (97-153)||(19631741-19631797)
chr6 (97-153)||(11084152-11084208)
[»] chr3 (54 HSPs)
chr3 (1-146)||(40552300-40552445)
chr3 (1-148)||(35844314-35844461)
chr3 (7-149)||(47481509-47481651)
chr3 (1-147)||(48354930-48355076)
chr3 (1-146)||(3655243-3655388)
chr3 (1-145)||(4015451-4015595)
chr3 (1-145)||(20373337-20373481)
chr3 (8-146)||(7327530-7327669)
chr3 (1-145)||(51213022-51213166)
chr3 (1-135)||(29099356-29099490)
chr3 (9-145)||(37203058-37203194)
chr3 (1-132)||(40935995-40936126)
chr3 (9-143)||(46297811-46297945)
chr3 (1-146)||(11466814-11466959)
chr3 (1-146)||(26941301-26941446)
chr3 (1-147)||(22450957-22451103)
chr3 (1-99)||(42506116-42506214)
chr3 (1-146)||(52040963-52041109)
chr3 (7-147)||(21009849-21009992)
chr3 (16-145)||(37157699-37157827)
chr3 (1-146)||(44186542-44186687)
chr3 (1-145)||(45174494-45174640)
chr3 (16-147)||(4761705-4761838)
chr3 (1-130)||(11357405-11357535)
chr3 (1-147)||(21193595-21193741)
chr3 (7-149)||(34132922-34133064)
chr3 (1-147)||(39282642-39282787)
chr3 (1-145)||(27480420-27480564)
chr3 (17-145)||(54505799-54505926)
chr3 (1-149)||(33378826-33378971)
chr3 (1-149)||(53229193-53229342)
chr3 (1-143)||(24708158-24708295)
chr3 (1-143)||(43975929-43976068)
chr3 (7-106)||(3362283-3362382)
chr3 (16-144)||(25579731-25579859)
chr3 (1-105)||(2007964-2008068)
chr3 (1-117)||(53176074-53176189)
chr3 (107-149)||(53175710-53175752)
chr3 (7-142)||(22446111-22446247)
chr3 (7-119)||(24489009-24489121)
chr3 (16-147)||(46994717-46994837)
chr3 (7-143)||(54828748-54828883)
chr3 (61-145)||(33698183-33698263)
chr3 (97-147)||(40640634-40640684)
chr3 (79-148)||(55343403-55343472)
chr3 (88-144)||(29163839-29163895)
chr3 (97-149)||(32180747-32180799)
chr3 (61-145)||(44891498-44891581)
chr3 (97-143)||(53818509-53818555)
chr3 (91-144)||(11835737-11835790)
chr3 (1-42)||(29163912-29163953)
chr3 (61-102)||(41585408-41585449)
chr3 (98-142)||(4556543-4556587)
chr3 (1-148)||(32373460-32373605)
[»] chr1 (53 HSPs)
chr1 (16-148)||(32267027-32267159)
chr1 (1-143)||(15752027-15752169)
chr1 (1-146)||(2959743-2959888)
chr1 (1-149)||(48620629-48620777)
chr1 (1-144)||(10922724-10922867)
chr1 (16-150)||(1547278-1547412)
chr1 (1-135)||(28564817-28564951)
chr1 (8-149)||(11742394-11742534)
chr1 (1-146)||(18422646-18422791)
chr1 (1-147)||(15382927-15383073)
chr1 (1-149)||(37618928-37619080)
chr1 (1-146)||(30254419-30254563)
chr1 (1-145)||(38823210-38823354)
chr1 (9-147)||(16415639-16415778)
chr1 (1-119)||(9903090-9903208)
chr1 (1-146)||(10182044-10182189)
chr1 (1-145)||(3309144-3309287)
chr1 (1-145)||(31621589-31621733)
chr1 (9-144)||(14758038-14758173)
chr1 (7-146)||(19899811-19899950)
chr1 (1-148)||(34012413-34012560)
chr1 (1-148)||(39393376-39393523)
chr1 (1-116)||(51128884-51128999)
chr1 (7-145)||(23999343-23999481)
chr1 (1-139)||(47279191-47279329)
chr1 (9-106)||(32216090-32216187)
chr1 (1-147)||(8222125-8222268)
chr1 (7-143)||(27763353-27763487)
chr1 (1-145)||(30326988-30327132)
chr1 (1-145)||(42721035-42721179)
chr1 (1-143)||(28769651-28769792)
chr1 (1-119)||(37451308-37451425)
chr1 (1-143)||(41926161-41926303)
chr1 (1-145)||(7079099-7079254)
chr1 (1-145)||(21289661-21289812)
chr1 (1-129)||(27533016-27533144)
chr1 (1-145)||(47682530-47682673)
chr1 (1-132)||(4330288-4330421)
chr1 (7-143)||(46931406-46931545)
chr1 (1-148)||(3534925-3535072)
chr1 (1-148)||(15168082-15168236)
chr1 (1-143)||(33725636-33725778)
chr1 (1-145)||(27267235-27267376)
chr1 (1-113)||(40884841-40884953)
chr1 (1-145)||(27227521-27227657)
chr1 (18-157)||(238566-238703)
chr1 (1-143)||(27563941-27564084)
chr1 (84-148)||(22170747-22170811)
chr1 (63-146)||(30254853-30254936)
chr1 (9-55)||(25160718-25160764)
chr1 (97-145)||(43579242-43579290)
chr1 (97-146)||(13876919-13876968)
chr1 (16-48)||(1359934-1359966)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-143)||(43959-44101)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-143)||(154686-154828)
[»] scaffold0002 (3 HSPs)
scaffold0002 (7-146)||(133-272)
scaffold0002 (9-119)||(94432-94542)
scaffold0002 (1-91)||(408470-408559)
[»] scaffold0022 (1 HSPs)
scaffold0022 (7-143)||(146063-146199)
[»] scaffold0318 (1 HSPs)
scaffold0318 (1-143)||(11908-12053)
[»] scaffold0009 (2 HSPs)
scaffold0009 (61-146)||(42347-42432)
scaffold0009 (84-151)||(100815-100882)
[»] scaffold0262 (1 HSPs)
scaffold0262 (96-145)||(12137-12186)


Alignment Details
Target: chr2 (Bit Score: 336; Significance: 0; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 16 - 438
Target Start/End: Original strand, 2325444 - 2325866
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  2325444 gatgatactatgaggactgaacttttgatgccagtgtacaaacaatggggtgttactcaatacatttatgatgttatattgttaacttcacgagaaaagt 2325543  T
Q  116 cattcgcataacttcaccataaaattttccttttatattaatcgttttgatctttaaatttgcttcgattacaccaattaatttggataattttccatta 215  Q
    ||||| ||||||||||||||| |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||    
T  2325544 cattcacataacttcaccatagaattttccttttatattaatcgttttgatccttaaattcgctttgattacaccaattaatttggataattttccatta 2325643  T
Q  216 atttgtttgtttgtaagagagggagagacatcttatatttatctcaccttgtacagannnnnnnnngcattacactttaattaatggatcgaggtaattt 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||         ||||||||||||||||||||||||||||||||||    
T  2325644 atttgtttgtttgtaagagagggagagacatcttatatttatctcaccttgtacagatttttttttgcattacactttaattaatggatcgaggtaattt 2325743  T
Q  316 aaccatataatttttctttcttcatgtttttcatctttactcttgcaatcaattatagttcagctttgttccatttaacagatggtaatacatgtctcac 415  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||| || ||||||||||||||| ||  |||||||||||||||||    
T  2325744 aaccatataatttttttttcttcatgtttttcatctttagtcttgcaatcaattatagtgcaactttgttccatttaagagggggtaatacatgtctcac 2325843  T
Q  416 cacctttcgcgcacacactatat 438  Q
    |||||||||||||||||||||||    
T  2325844 cacctttcgcgcacacactatat 2325866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 33551045 - 33551189
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| ||| ||||||||||||||| |||||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  33551045 ttaatctgatgaattgatgatactatgaagaccgaacttttgatgtcattgtacaaacagtggggtgttactcactacatttttgatgttatagtgttaa 33551144  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||| ||| |||||||| || ||||||||    
T  33551145 cttcactaaaaaagtcattctcatgacttcaccgtagaattttcc 33551189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 19424687 - 19424832
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||| || | || | ||||||||||||||||||  ||| || |||||||||||||||||    
T  19424687 ttaatctgatgaattgatgatactatgaggactaaacttttgatgccactatataaacaatggggtgttactcacaacacttttgatgttatagtgttaa 19424786  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| ||||||| ||||| ||| |||||||||||||||||||||    
T  19424787 cttcaccagaaaagccattctcatgacttcaccataaaattttcct 19424832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 36642130 - 36641988
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||   ||| || ||||| |||||| ||||    
T  36642130 ttaatttgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtgaggtgttactcgcaacacttttgatgctatagtattaa 36642031  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     ||||| ||||||||||||| ||| ||||||||||| ||||||    
T  36642030 tttcaccagaaaagtcattctcatgacttcaccatagaatttt 36641988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17071796 - 17071941
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||  || ||||||||||||||| |||||| | |||| | ||||||| | ||||||| || ||||||||||||||    
T  17071796 ttaatctgatgaattgatgatactatgaataccgaacttttgatgtcattgtacaaataatgagatgttacttactacatttttgttgttatagtgttaa 17071895  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | ||||||||||||||| ||||||||||| |||||||||    
T  17071896 cttcaccaaaaaagtcattcgcatgacttcaccatagaattttcct 17071941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 3177077 - 3176941
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | | ||||||||||| |||||| |||| ||||||| |||||||||     
T  3177077 tgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgcgtgttactcaaaacatttttgatattatagtattaacttcat 3176978  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     ||||||||||||  | ||||||||||||| ||||||    
T  3176977 cagaaaagtcattttcgtaacttcaccatagaatttt 3176941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37905852 - 37905709
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||  ||||||| | |||||||||||||||    
T  37905852 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttacattttttatgttatagtgttaa 37905753  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| |||||   |||||||||||||| ||||||||    
T  37905752 cttcacca-aaaaatcatttttataacttcaccatagaattttcc 37905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 17054155 - 17054300
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||||  || | ||||||||||||| |||||| |||||| | ||||||| | ||||||| |||||||||||| ||||    
T  17054155 ttaatctgatgaattgatgatattatgaataccgnacttttgatgtcattgtacaaacaatgagatgttacttactacatttttgatgttatagtattaa 17054254  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | ||||||||||||||| ||||||||||| |||||||||    
T  17054255 cttcaccaaaaaagtcattcgcatgacttcaccatagaattttcct 17054300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 26357721 - 26357577
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| |  |||| || |||||||||||||||||| |||||| ||| |||| ||||||||| |||| || |||||||||||||||||    
T  26357721 ttaatatgatgaattgataactctataagaactgaacttttgatgtcactgtacaaacagtgggatgttactcactacagttttgatgttatagtgttaa 26357622  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  ||||||||||||  ||| ||||||||||||||||||||    
T  26357621 cttcatcagaaaagtcattttcatgacttcaccataaaattttcc 26357577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 13711608 - 13711458
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||| ||| ||||| |||||||||||||| |||||| ||  ||||||||||||||  ||| || ||||| |||| ||||||    
T  13711608 ttaatctgatgaattgatgataccatgtggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgctataatgttaa 13711509  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttttat 151  Q
    |||||| |||||||||||||  || ||||||||||| ||||||| ||||||    
T  13711508 cttcaccagaaaagtcattctgatgacttcaccatagaattttcattttat 13711458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 151
Target Start/End: Original strand, 19289382 - 19289527
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||| |||| ||| |||||||||||||| |||||| |||||||||||||||||| || |||| |||||||||||||||||    
T  19289382 ttaatctgatgagttgatgatactgtgagaacttaacttttgatgtcattgtacaaacaatggggtgttactcattatatttttgatgttatagtgttaa 19289481  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttttat 151  Q
    |||||  | |||||||||     | ||||||||||| ||||||||||||||    
T  19289482 cttcatcaaaaaagtcat-----tgacttcaccatagaattttccttttat 19289527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 11366446 - 11366585
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||||| ||||||||||||||||| | |||| | | || | ||||||||| ||||||| ||||||||||||||||| |||||    
T  11366446 tgatgaattgatgatactatgagggctgaacttttgatgtcattatacaaatagtgagatgttactcattacatttttgatgttatagtgttaatttcac 11366545  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     | |||||||||||  || | ||||||||| |||||||||    
T  11366546 caaaaaagtcattcttatgatttcaccatagaattttcct 11366585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 31570793 - 31570939
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||||||| |||||||||||||||||||| | || | | | |||||||||||| |  ||| || | |||||||||||||||    
T  31570793 ttaatctgatgaattcatgatactatgtggactgaacttttgatgtcactataaaaatagtggggtgttacttacaacacttttaatgttatagtgttaa 31570892  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     ||||| |||||||| |||| ||||||||||||||| ||||||||||    
T  31570893 tttcaccagaaaagttattctcataacttcaccatagaattttcctt 31570939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 33660435 - 33660569
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||| ||||||||||||||||||| || |||||| ||| | ||||||||||||  ||| || |||||||||||||||||||| || |    
T  33660435 atgaattgatgatactaagaggactgaacttttgatgccactgtacaaacagttgggtgttactcacaacacttttgatgttatagtgttaacttaacta 33660534  T
Q  109 gaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||||||||   || ||||||||||| ||||||    
T  33660535 gaaaagtcattttaatgacttcaccatagaatttt 33660569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 4264136 - 4264281
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| ||||||||  ||||||||||||||||||| |||||| ||| |||| |||||||||  ||| || ||||| |||||||||||    
T  4264136 ttaatatgatgaattgataatactatggagactgaacttttgatgtcactgtacaaacagtgggatgttactcacaacacttttgatgctatagtgttaa 4264235  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||| || ||||||||||||   || ||||||||||| |||||||||    
T  4264236 ctttaccagaaaagtcattatgatgacttcaccatagaattttcct 4264281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 4478513 - 4478408
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||| ||||||||||| || |||||| ||||||| ||||||||||  ||| || |||||||||||||||||    
T  4478513 ttaatctgatgaattgatgatactatgaggactaaacttttgatgccactgtacaaacaatggagtgttactcacaacacttttgatgttatagtgttaa 4478414  T
Q  101 cttcac 106  Q
    ||||||    
T  4478413 cttcac 4478408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 43648304 - 43648409
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||| ||||||||||||||||||| | |||| ||| || ||||||||||| ||||||| |||||||||||||||||    
T  43648304 ttaatctgatgagttgatgatactatgatgactgaacttttgatgtcattatacaaacagtgaggtgttactcattacatttttgatgttatagtgttaa 43648403  T
Q  101 cttcac 106  Q
    ||||||    
T  43648404 cttcac 43648409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 4167060 - 4166920
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| | |||||||||| ||||||||||||||||| || |||||| ||| ||||||||||||||  | |||| ||||  |||| ||||||||||||    
T  4167060 tgatgaattgttgatactatggggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatactataatgttaacttcac 4166961  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     ||||||||||||  | | ||||||||||| ||||||||||    
T  4166960 cagaaaagtcattttcgtgacttcaccatagaattttcctt 4166920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 29242197 - 29242343
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||  || |||||| ||| ||||||||||| || || |||| | |||||||||| ||||    
T  29242197 ttaatctgatgaattgatgatactatgaagactgaacttttgataccactgtacaaacagtggggtgttacgcactatattttttatgttatagttttaa 29242296  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | ||||  ||||  ||| ||||||||||| ||||||||||    
T  29242297 cttcaccaaaaaaaccattttcatgacttcaccatagaattttcctt 29242343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 41463909 - 41464051
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| || |||||| ||| || |||||||||||  ||| || |||| ||||||| ||||    
T  41463909 ttaatatgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtgaggtgttactcacaacacttttgattttatagtattaa 41464008  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | ||| ||||||| ||  ||||||||||| ||||||    
T  41464009 cttcaccaaaaatgtcattctcacgacttcaccatagaatttt 41464051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 33902210 - 33902068
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||  ||||||||| ||||||||||||||||||||||| | |||| ||| |||||| ||||||| ||||||| | ||||  |||||||||    
T  33902210 ttaatctgatgaactgatgatactttgaggactgaacttttgatgtcattttacaaacagtggggtattactcactacattttttatgt--tagtgttaa 33902113  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| |||||||||||||  |  |||||| |||| ||||||||    
T  33902112 cttcaccagaaaagtcattctaacgacttcatcatagaattttcc 33902068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 19313995 - 19313852
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||| ||||||||||||||||||||| |||| | | | |  |||||||||||  ||| || ||||| |||| ||||||    
T  19313995 ttaatctgatgaattgatgatactat-aggactgaacttttgatgtcactgtataaatagtaaggtgttactcacaacacttttgatgctataatgttaa 19313897  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| |||||||||||||  || ||||||||||| ||||||||    
T  19313896 cttcaccagaaaagtcattctaatgacttcaccatagaattttcc 19313852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27349998 - 27350143
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | |||||||||||||||||||| |||||| ||| || |||||||||||  |||||| ||||| |||||||||||    
T  27349998 ttaatctgatgaattgatgatactaag-ggactgaacttttgatgtcactgtacaaacagtgtggtgttactcacaacatttttgatgctatagtgttaa 27350096  T
Q  101 cttcacgagaaaa-gtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | ||||  | |||   || |||||||||||||||||||||    
T  27350097 cttcaccaaaaaatattattttaatgacttcaccataaaattttcct 27350143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 39167430 - 39167568
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| ||||||||||||||||||||||||||||||||| |||||| ||| || |||||||||||  | | || ||||  |||  |||||||||||  |    
T  39167430 atgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaggtgttactcacaatacttttgatactattctgttaacttcatca 39167529  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     |||| |||||| | | ||||||||||||||||||||||    
T  39167530 aaaaaatcattctcgtgacttcaccataaaattttcctt 39167568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 43770898 - 43771039
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| || | ||||||||||||||||| || |||| | ||| ||||||||||||||  ||| || |||||||||||||||||    
T  43770898 ttaatctgatgaattgatgatattaaggggactgaacttttgatgccactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaa 43770997  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | |||| ||||||  || ||||||||||| ||||||    
T  43770998 cttcacca-aaaaatcattctaatgacttcaccatagaatttt 43771039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4763775 - 4763628
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatag---tgt 97  Q
    ||||| |||||||| ||| |||||||| | |||||||||||||||||| |||||| ||| |||||||||||||| |||| || || || |||||   |||    
T  4763775 ttaatctgatgaattgattatactatgggaactgaacttttgatgtcactgtacaaacagtggggtgttactcactacagttttgttgatatagtgttgt 4763676  T
Q  98 taacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||  ||||||||||||  ||| |||||| |||| ||||||||    
T  4763675 taacttcatcagaaaagtcattttcatgacttcatcatagaattttcc 4763628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 18494345 - 18494476
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||||||||||||||||||||||             ||||||||||||||  ||| || ||||| |||||||||||||||||    
T  18494345 tgatgaattgatgatactatgaggactgaacttttgatgtcg------------tggggtgttactcacaacacttttgatgctatagtgttaacttcac 18494432  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttta 150  Q
     ||||||||||||  ||| ||||||||| | |||||||||||||    
T  18494433 cagaaaagtcattttcatgacttcaccacagaattttcctttta 18494476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 5881683 - 5881533
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaataca-----tttatgatgttatagt 95  Q
    ||||| |||||||| |||||||||| | ||||| |||||||||||||| |||||| ||| ||||||||||||||  |||      || |||||||||| |    
T  5881683 ttaatatgatgaattgatgatactaaggggactcaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgttttgatgttataat 5881584  T
Q  96 gttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     | |||||||| ||||||||||||   || ||||||| |||||||||||||    
T  5881583 atcaacttcaccagaaaagtcattttaatgacttcacaataaaattttcct 5881533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 106
Target Start/End: Original strand, 33709306 - 33709396
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||||||| |||||||||||||||||||| |||||  ||| ||| |||||||||   ||| || |||||||||||||||||||||||    
T  33709306 gatgatactatggggactgaacttttgatgtcactgtactaacagtggagtgttactcgcaacacttttgatgttatagtgttaacttcac 33709396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 63 - 145
Target Start/End: Complemental strand, 41465591 - 41465509
Alignment:
Q  63 gggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||| |||||| ||||  | ||||| ||||||||||||||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  41465591 gggtgctactcactacacctttgatgctatagtgttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcc 41465509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 32 - 145
Target Start/End: Complemental strand, 35959022 - 35958909
Alignment:
Q  32 ctgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttca 131  Q
    |||||||||| |||||| |||||| ||| ||||||||| |||| ||||||| | |||||||||||  |||||||| | ||||||||||   || ||||||    
T  35959022 ctgaacttttaatgtcattgtacaaacagtggggtgttgctcattacattttttatgttatagtggcaacttcaccaaaaaagtcatttttatgacttca 35958923  T
Q  132 ccataaaattttcc 145  Q
     |||| ||||||||    
T  35958922 tcatagaattttcc 35958909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44286093 - 44285951
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||||||| ||||| ||||||||||| || | |||| ||| || | | || |||   ||| || ||||| |||||||||||    
T  44286093 ttaatctgatgaatttatgatactatgtggactaaacttttgatgccactatacaaacagtgagatattgctcgcaacacttttgatgctatagtgttaa 44285994  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||  |||||| |||||||||| |||||||| || ||||||    
T  44285993 cttcatcagaaaaatcattcgcatgacttcaccgtataatttt 44285951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41051264 - 41051308
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatg 45  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||    
T  41051264 ttaatctgatgaattgatgatactatgaggactgaacttttgatg 41051308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 44913801 - 44913662
Alignment:
Q  7 tgatgaatggatgatactatgagg-actgaacttttgatgtcagtgtacagacaa-tggggtgttactcaatacatttatgatgttatagtgttaacttc 104  Q
    |||||||| |||||||||||| || | ||||||||| |||||| | |||| |||| || |||||||||||  |||||| ||||  || ||||||||||||    
T  44913801 tgatgaattgatgatactatgggggattgaactttttatgtcattttacaaacaagtgaggtgttactcacaacatttttgatactacagtgttaacttc 44913702  T
Q  105 acgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    || | ||||||||||  | | ||||||||||| ||||||||    
T  44913701 ac-ataaaagtcattttcgtgacttcaccatagaattttcc 44913662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 19093461 - 19093410
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||||||| |||||| |||||| ||| |||||||||||||||||||||||    
T  19093461 ttaacttcaccagaaaaatcattctcatgacttcaccataaaattttccttt 19093410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45327864 - 45327817
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtca 48  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  45327864 ttaatctgatgaattgatgatactatgatgactgaacttttgatgtca 45327817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41960984 - 41960939
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgt 46  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||    
T  41960984 ttaatctgatgaattgatgatactatgtggactgaacttttgatgt 41960939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 31861943 - 31861895
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||| | ||||||||||| ||||||||||||||| ||||||||    
T  31861943 ttaacttcaccaaaaaagtcattctcataacttcaccatagaattttcc 31861895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 41960944 - 41960881
Alignment:
Q  84 tgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||||||||||||||||||||||  | ||||||||||   || ||||||||||| ||||||||||    
T  41960944 tgatgttatagtgttaacttcatcaaaaaagtcatttctatgacttcaccatagaattttcctt 41960881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 100 - 146
Target Start/End: Original strand, 39788580 - 39788626
Alignment:
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||||||| |||||||||||||  || |||||||||||||||||||||    
T  39788580 acttcactagaaaagtcattcttatgacttcaccataaaattttcct 39788626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 22963448 - 22963400
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||| || |||||||||||||  || ||||||||||||||||||||    
T  22963448 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22963400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 22998029 - 22998077
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||| || |||||||||||||  || ||||||||||||||||||||    
T  22998029 ttaactttaccagaaaagtcattcttatgacttcaccataaaattttcc 22998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 1e-42; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 1205070 - 1204922
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||  ||||||||||||||||||||||||||||||||| |||||| ||| ||  |||||||||| ||||||| | |||||||||||||||    
T  1205070 ttaatatgatgaactgatgatactatgaggactgaacttttgatgtcattgtacaaacagtgatgtgttactcactacattttttatgttatagtgttaa 1204971  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| ||||||||||||| ||| |||||||| |||||||||||||||    
T  1204970 cttcaccagaaaagtcattctcatgacttcaccgtaaaattttcctttt 1204922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 10555249 - 10555393
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||| |||||| ||| ||| |||||||||| ||||||| | |||||||||||||||    
T  10555249 ttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggagtgttactcattacattttttatgttatagtgttaa 10555348  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||| ||| |||||||| || ||||||||    
T  10555349 cttcaccaaaaaagtcattctcatgacttcaccgtagaattttcc 10555393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 9 - 136
Target Start/End: Original strand, 37970574 - 37970701
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| ||||||||||||||| |||||||||||||| || |||||| ||| |||||||||||||| ||||||| ||||||||||||||||||||||| |    
T  37970574 atgaattgatgatactatgagggctgaacttttgatggcattgtacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcacca 37970673  T
Q  109 gaaaagtcattcgcataacttcaccata 136  Q
     ||||||||||| ||| |||||||||||    
T  37970674 aaaaagtcattctcatgacttcaccata 37970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 27082885 - 27083030
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| |||||||||||||||||||||||||| ||| || || ||| ||| |||||||||||||| |||| || ||||| |||||||||||    
T  27082885 ttaatttgatgaattgatgatactatgaggactgaacttttaatgccactgcacaaacagtggggtgttactcactacacttttgatgctatagtgttaa 27082984  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| |||||||||| ||  || ||||||||||| |||||||||    
T  27082985 cttcaccagaaaagtcagtctgatgacttcaccatagaattttcct 27083030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 36695019 - 36695159
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||  |||||| |||| |||||||||||||||||     
T  36695019 tgatgaattgatgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattatagtgttaacttcat 36695118  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     ||||||||||||  | | ||||||||||| ||||||||||    
T  36695119 cagaaaagtcattttcctgacttcaccatagaattttcctt 36695159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1150152 - 1150297
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||| ||||||||||||||||||  |||||| ||| |||| ||||||||| ||||||| ||||||||||| |||||    
T  1150152 ttaatctgatgagttgatgatactatgatgactgaacttttgatgtcgttgtacaaacagtgggatgttactcattacatttttgatgttatagcgttaa 1150251  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | |||||||||||  || ||||||||||| |||||||||    
T  1150252 cttcaccaaaaaagtcattcttatgacttcaccatagaattttcct 1150297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 145
Target Start/End: Complemental strand, 13307765 - 13307622
Alignment:
Q  2 taatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaac 101  Q
    |||| |||||||| ||| |||||||| |||||||||||||||||||| |||||| | | || |||||||||||  ||| || ||||||||||||||||||    
T  13307765 taatctgatgaattgataatactatggggactgaacttttgatgtcactgtacaaatagtgaggtgttactcacaacacttttgatgttatagtgttaac 13307666  T
Q  102 ttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||| |||||| |||||| ||| ||||||||||| ||||||||    
T  13307665 ttcaccagaaaaatcattctcatgacttcaccatagaattttcc 13307622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 43643642 - 43643788
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||| || |||||||| ||||||| |||||| ||| | | |||||||||| ||||||| |||||||||||||||||    
T  43643642 ttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaa 43643741  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | || |||||||| ||| ||||||||||| ||||||||||    
T  43643742 cttcaccaaaatagtcattctcatgacttcaccatagaattttcctt 43643788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 16 - 133
Target Start/End: Original strand, 23854493 - 23854610
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||||||||||||||||||||||||||||| || ||| ||| | |||||||||||| ||||||| | ||||||||||||||||||||| | ||||||    
T  23854493 gatgatactatgaggactgaacttttgatgtcattgcacaaacagttgggtgttactcattacattttttatgttatagtgttaacttcaccaaaaaagt 23854592  T
Q  116 cattcgcataacttcacc 133  Q
    ||||| ||| ||||||||    
T  23854593 cattctcatgacttcacc 23854610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 6098565 - 6098709
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| || ||||||||| |||||||||||||||||||| |||||| ||| |||||||||||||| || |||| ||||| |||||| ||||    
T  6098565 ttaatctgatgaattgacgatactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcactatatttttgatgctatagtattaa 6098664  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||||| |||  ||| ||||||||||| ||||||||    
T  6098665 cttcaccaaaaaagttattttcatgacttcaccatagaattttcc 6098709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 12876252 - 12876108
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | ||||||||||||  |||||| | || ||||||||||||    
T  12876252 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagttgggtgttactcacaacattttttatattatagtgttaa 12876153  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  ||||||||||||  | | |||| |||||| ||||||||    
T  12876152 cttcatcagaaaagtcattttcgtgacttaaccatagaattttcc 12876108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 34895110 - 34894963
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||| |||||||||||||||| || | |||| ||| ||| |||||||||| |||| |  |||||||||||||||||    
T  34895110 ttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaa 34895011  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||  ||||||||||||  ||| ||||||||||| |||||||||||    
T  34895010 cttcatcagaaaagtcattttcatgacttcaccatagaattttccttt 34894963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 16446922 - 16447067
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||| ||||| ||||||||||| || | |||| ||| |||||||||||||| |||| || |||||||||||||||||    
T  16446922 ttaatctgatgaattgatgatagtatggggactaaacttttgatgccattatacaaacagtggggtgttactcactacaattttgatgttatagtgttaa 16447021  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||| |  ||||||||||||  ||| ||||||||||| |||||||||    
T  16447022 ctttatcagaaaagtcattttcatgacttcaccatagaattttcct 16447067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 8 - 147
Target Start/End: Complemental strand, 16222999 - 16222860
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    ||||||| ||||||||||||||||||||||||||||||||| |||||| ||  |||||   |||||| || |||| | ||||||||||||||| |||||     
T  16222999 gatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaactgtggggaactactcactatattttttatgttatagtgttaaattcacc 16222900  T
Q  108 agaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||||||||||||| ||| | |||||| || ||||||||||    
T  16222899 agaaaagtcattctcatgatttcaccgtagaattttcctt 16222860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 30654636 - 30654775
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||  ||||||||||||| | ||||||||||||||||| |  ||| ||| |||||||||||||| ||||||| | |||||||||||||||||||||    
T  30654636 tgatgaagtgatgatactatgaaggctgaacttttgatgtcattcaacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcac 30654735  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     | |||| ||| ||  || |||||||||||||||||||||    
T  30654736 caaaaaaatcactcttatgacttcaccataaaattttcct 30654775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 465985 - 465843
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | |||||||| |||||||| || |||||| ||| ||||||||||||||  ||| || ||||||||| |||||||    
T  465985 ttaatctgatgaattgatgatactaaggggactgaatttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatcgtgttaa 465886  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | ||||||||||   || ||||||||||||||||||    
T  465885 cttcaccacaaaagtcattttaatgacttcaccataaaatttt 465843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 11727167 - 11727037
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||| |||||||||||||||||||||| || | |||| | | |||||||||||| |  ||| || |||||||||||||||||    
T  11727167 ttaatttgatgaattgatgatattatgaggactgaacttttgatgccactatacaaatagtggggtgttacttacaacacttttgatgttatagtgttaa 11727068  T
Q  101 cttcacgagaaaagtcattcgcataacttca 131  Q
    |||||| | |||| |||||| ||||||||||    
T  11727067 cttcaccaaaaaaatcattctcataacttca 11727037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 38644121 - 38643975
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||  |||||||||||||||| || |  ||| ||| ||||||||||||||  ||| || |||||||||||||||||    
T  38644121 ttaatctgatgaattgatgatactatggagactgaacttttgatgccactagacaaacagtggggtgttactcacaacacttttgatgttatagtgttaa 38644022  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||| || | ||||||||||| ||| | ||||||||| ||||||||||    
T  38644021 cttgaccaaaaaagtcattctcatgatttcaccatagaattttcctt 38643975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 41362658 - 41362517
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||| ||||||||||||||||| | |||| | | |||||||||||||| ||||||| | |||   |||||||||    
T  41362658 ttaatctgatgaattgatgatactatgaggtctgaacttttgatgtcactatacaaatagtggggtgttactcactacattt-ttatg--ctagtgttaa 41362562  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||  ||||||||||||||| ||||||||    
T  41362561 cttcaccaaaaaagtcattttcataacttcaccatagaattttcc 41362517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 9864285 - 9864143
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||  |||||| ||||  ||||||||||| |||||    
T  9864285 tgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcac 9864186  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
     | ||||||||||  | | ||||||  ||| ||||||||||||    
T  9864185 caaaaaagtcattttcgtgacttcattatagaattttcctttt 9864143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 34952078 - 34952196
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||||||   |||||||||||||||||||| |||||| ||| |||| |||||||||  ||| || ||||| |||||||||||    
T  34952078 ttaatttgatgaattgatgatactaaagggactgaacttttgatgtcactgtacaaacagtgggctgttactcacaacacttttgatgatatagtgttaa 34952177  T
Q  101 cttcacgagaaaagtcatt 119  Q
    ||| || ||||||||||||    
T  34952178 cttgaccagaaaagtcatt 34952196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5299993 - 5300137
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||| |||||||||||||||||| || |||||| ||| | | ||| |||| |  ||| || ||||| |||||||||||    
T  5299993 ttaatctgatgaattgatgatactataaggactgaacttttgatgccactgtacaaacagtagagtgctacttacaacacttttgatgctatagtgttaa 5300092  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  | ||||||||||| ||| ||||||||||| ||||||||    
T  5300093 cttcattaaaaaagtcattctcatgacttcaccatagaattttcc 5300137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 8 - 132
Target Start/End: Original strand, 31933940 - 31934064
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    ||||||| ||||||||||| | ||||||||||||||||||| |||| | | | |||||||||||||| || |||| |||| | ||||||||||||||||     
T  31933940 gatgaattgatgatactataatgactgaacttttgatgtcattgtataaagagtggggtgttactcattatatttttgatatcatagtgttaacttcacc 31934039  T
Q  108 agaaaagtcattcgcataacttcac 132  Q
    | |||| |||||| |||||||||||    
T  31934040 aaaaaaatcattctcataacttcac 31934064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 8803888 - 8803998
Alignment:
Q  32 ctgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttca 131  Q
    ||||||||||||||||| | |||| | | ||| |||||||||| ||||||| ||||||||||||||||||||||| | |||||||||    || ||||||    
T  8803888 ctgaacttttgatgtcattctacaaatagtggagtgttactcattacatttttgatgttatagtgttaacttcaccaaaaaagtcat----atgacttca 8803983  T
Q  132 ccataaaattttcct 146  Q
    ||||| |||||||||    
T  8803984 ccatagaattttcct 8803998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 147
Target Start/End: Complemental strand, 40862547 - 40862416
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaataca-tttatgatgttatagtgttaacttcacgagaaaag 114  Q
    |||||||| ||||| ||||||||||||||| || |||||| ||| ||||||||||||||  ||| ||| |||| |||||||||||||||||| |||||||    
T  40862547 gatgataccatgag-actgaacttttgatgccattgtacaaacagtggggtgttactcacaacattttttgatattatagtgttaacttcaccagaaaag 40862449  T
Q  115 tcattcgcataacttcaccataaaattttcctt 147  Q
    | |||  | | ||||||| ||| ||||||||||    
T  40862448 ttattttcgtgacttcactatagaattttcctt 40862416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 7891004 - 7891137
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||||||| |||||||||||| || |||||| ||  ||| ||||||         ||| |||||||||||||||||    
T  7891004 ttaatctgatgaattgatgatattatgaggaccgaacttttgatgccattgtacaaacggtggagtgtta---------tttttgatgttatagtgttaa 7891094  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||    
T  7891095 cttcacaaaaaaagtcattctcatgacttcaccatagaatttt 7891137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 1149679 - 1149760
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacattt 82  Q
    ||||| |||||| | ||||||||||||||||| ||||||||||||||| |||||| ||| |||| ||||||||| |||||||    
T  1149679 ttaatctgatgagttgatgatactatgaggacagaacttttgatgtcattgtacaaacagtgggttgttactcattacattt 1149760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39099166 - 39099237
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttact 72  Q
    ||||| |||||||| || |||||||||||||||||||||||||||  |||||||| | | ||||||||||||    
T  39099166 ttaatctgatgaattgacgatactatgaggactgaacttttgatgctagtgtacaaagagtggggtgttact 39099237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 145
Target Start/End: Original strand, 4133077 - 4133199
Alignment:
Q  21 tactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattc 120  Q
    ||||||||||||||||||||||||| || |||||| ||| |  ||| ||||||| ||  ||| | ||| ||  ||||||||||||| | |||||||||||    
T  4133077 tactatgaggactgaacttttgatgccactgtacaaacagtcaggtattactcactatcttttttatgcta--gtgttaacttcaccaaaaaagtcattc 4133174  T
Q  121 gcataacttcaccataaaattttcc 145  Q
      || |||| |||||||||||||||    
T  4133175 tgatgacttgaccataaaattttcc 4133199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 84 - 145
Target Start/End: Complemental strand, 15009302 - 15009241
Alignment:
Q  84 tgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||||||||||||||||| | |||||||||||  || ||||||||||| ||||||||    
T  15009302 tgatgttatagtgttaacttcaccaaaaaagtcattcttatgacttcaccatagaattttcc 15009241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 33906307 - 33906223
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||| |||||| |||| || | ||  ||||||||| ||||||| ||||||||||||| ||||| ||||||||| ||||||||    
T  33906307 tggggtgctactcactacacttttaatactatagtgttgacttcaccagaaaagtcattctcataatttcaccatagaattttcc 33906223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 84 - 147
Target Start/End: Original strand, 24823402 - 24823465
Alignment:
Q  84 tgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||| |||||||||||||||||| | ||||||||||| |||||||| ||||||  |||||||||    
T  24823402 tgatattatagtgttaacttcaccaaaaaagtcattctcataactttaccatagtattttcctt 24823465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 44869640 - 44869495
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactc----aatacatttatgatgttatagtg 96  Q
    ||||| |||| ||| ||||||||||||| || |||||||||||||||| ||| || ||| |||||  | ||||    ||||| ||||  |||||||||||    
T  44869640 ttaatctgataaattgatgatactatgacgattgaacttttgatgtcattgtgcaaacagtgggg-atcactcacaaaatactttta--atgttatagtg 44869544  T
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||| | |||||| ||||  |||| |||||| || ||||||||    
T  44869543 ttaacttcaccaaaaaagttattcttataatttcaccgtagaattttcc 44869495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 35459833 - 35459888
Alignment:
Q  89 ttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    ||||||| ||||||| |||| ||||||||||| ||| ||||||||||| |||||||    
T  35459833 ttatagtattaactttacgaaaaaagtcattctcatgacttcaccatagaattttc 35459888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 35459758 - 35459812
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtaca 55  Q
    ||||| |||||| | ||||||| |||||||||||||||||| |||||| ||||||    
T  35459758 ttaatctgatgagttgatgatattatgaggactgaacttttaatgtcattgtaca 35459812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 100 - 144
Target Start/End: Complemental strand, 3858893 - 3858849
Alignment:
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    ||||||| |||||||||||||| || | |||||||||||||||||    
T  3858893 acttcactagaaaagtcattcgtattatttcaccataaaattttc 3858849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 108 - 148
Target Start/End: Original strand, 39099263 - 39099303
Alignment:
Q  108 agaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||||||||||||| ||| ||||||||||| |||||||||||    
T  39099263 agaaaagtcattctcatgacttcaccatagaattttccttt 39099303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 88; Significance: 4e-42; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8031 - 7884
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||| || |||||||||||||||||    
T  8031 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatgttatagtgttaa 7932  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||  | |||||||||||  |||||||||||||| |||||| ||||    
T  7931 cttcatcaaaaaagtcattcttataacttcaccatagaatttttcttt 7884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 85; Significance: 2e-40; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 5657523 - 5657667
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||| || |||||| ||| ||||||||||||||  ||| || |||||||||||||||||    
T  5657523 ttaatatgatgaattgatgatactatgaagactgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaa 5657622  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  5657623 cttcactagaaaagtcattctcatgacttcaccatagaattttcc 5657667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37347141 - 37346997
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||| || |||| ||||| |||||| ||||    
T  37347141 ttaatttaataaattgatgatactatgaggactgaacttttgatgtcactgtacaaacaatggggtgttactcattatatttttgatggtatagtattaa 37347042  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| |||||  ||| ||||||||||||||||||||    
T  37347041 cttcaccaaaaaaatcattttcatgacttcaccataaaattttcc 37346997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 30055646 - 30055495
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  |||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||| || |||| ||||||||||||    
T  30055646 ttaatctgatgaattaatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacaattttgatattatagtgttaa 30055547  T
Q  101 cttca-cgagaaaagtcattcgcataacttcaccataaaattttccttttat 151  Q
    ||||| | | |||||||||||  || ||||||||||| ||||||||||||||    
T  30055546 cttcatcaaaaaaagtcattcttatgacttcaccatagaattttccttttat 30055495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 18797446 - 18797302
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | |||||||||||||||| |||||||||||||||| |||||| ||| |||||||||||||| ||||||| | ||||  |||||||||    
T  18797446 ttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtgttactcattacattttttatgt--tagtgttaa 18797349  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||||||    
T  18797348 cttcaccaaaaaagtcattctcatgacttcaccatagaattttcctt 18797302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 26524369 - 26524515
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||| ||| ||||||||||||||||||| |||||||||| || || ||| ||||||| |||||| |||  |||||| |||||||||||||||||    
T  26524369 ttaatatgataaattgatgatactatgaggactggacttttgatgccactgcacaaacaatggagtgttagtcacaacatttttgatgttatagtgttaa 26524468  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    | |||| ||||||||||||| ||| ||||||||||| ||||||||||    
T  26524469 catcaccagaaaagtcattctcatgacttcaccatagaattttcctt 26524515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 27283863 - 27283719
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||| ||| ||| ||||||||||||||||||||||||| ||| |||||| ||  |||||||||||||| ||||||| |||||||||||||||||    
T  27283863 ttaatctgataaattgataatactatgaggactgaacttttgatttcattgtacaaacggtggggtgttactcattacatttttgatgttatagtgttaa 27283764  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| |||||   |||||||||||||| ||||||||    
T  27283763 cttcaccaaaaaaatcatttttataacttcaccatagaattttcc 27283719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 31520766 - 31520909
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||| |||||| ||||||| |||||||||| || |||| ||||| |||||| ||||    
T  31520766 ttaatttaatgaattgatgatactatg-ggactgaacttttgatgtcactgtacaaacaatggagtgttactcactatatttttgatggtatagtattaa 31520864  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||  ||| |||||| |||||||||||||    
T  31520865 cttcaccaaaaaagtcattttcatgacttcatcataaaattttcc 31520909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 24211854 - 24211712
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||||| |||||||||||||| || | || | ||| | |||||||||||| ||||||| |||||||||||||||||||||||    
T  24211854 tgatgaattgatgatactatgagggctgaacttttgatgccattctataaacagtagggtgttactcattacatttttgatgttatagtgttaacttcac 24211755  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
     | |||||||||||  || ||||||||||| ||||||| ||||    
T  24211754 caaaaaagtcattcttatgacttcaccatagaattttcttttt 24211712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 32821103 - 32821241
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||| ||||||||||||||||||| || |||||| ||| ||| |||||||||| ||||||| |||||||||| |||||||||||| |    
T  32821103 atgaattgatgatactacgaggactgaacttttgatgccattgtacaaacagtggtgtgttactcactacatttttgatgttatattgttaacttcacca 32821202  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     |||| |||||  ||| ||||||||||| ||||||||||    
T  32821203 aaaaaatcattttcatgacttcaccatagaattttcctt 32821241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 8861404 - 8861260
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||| ||| |||||||||||| ||||| ||||||||||| || |||||| ||| |||||||||| |||  ||| || ||||| |||||||||||    
T  8861404 ttaatctgattaattgatgatactatggggacttaacttttgatgccactgtacaaacagtggggtgttattcataacacttttgatgctatagtgttaa 8861305  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||| ||||||||||||||| ||| ||||||||||| ||||||||    
T  8861304 cttcgcgagaaaagtcattctcatgacttcaccatagaattttcc 8861260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 37109991 - 37109847
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||| | ||||||||||||||||||| |||||| ||  |||||||||||||| ||||||| | |||||||||||||||    
T  37109991 ttaatctgatgaattgatgatattataatgactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaa 37109892  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||   || ||||||||||| ||||||||    
T  37109891 cttcaccaaaaaagtcatttttatgacttcaccatagaattttcc 37109847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 48928606 - 48928748
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| |||||||| ||||||||||||||||| ||  ||||| | | ||||||| |||||| |||| || ||||||||||||||| |    
T  48928606 ttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttga 48928704  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| ||||||||||||| ||| |||||||||||||||||||    
T  48928705 cttcaccagaaaagtcattctcatgacttcaccataaaattttc 48928748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 7334907 - 7334769
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||| | |||||||||||||| |||||||||||||||||| |||||| ||| |||||||||||||| ||||| | | ||||||||||||||||||||     
T  7334907 tgatgagttgatgatactatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatattttatgttatagtgttaacttcat 7334808  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     | ||||||||||| ||  |||||||| || ||||||||    
T  7334807 caaaaaagtcattctcacgacttcaccgtagaattttcc 7334769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 17842628 - 17842774
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||| | |||||| |||||||||||| |||||| ||  |||||||||||||| ||||||| | |||||||||||||||    
T  17842628 ttaatctgatgaattgatgatattataatgactgagcttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaa 17842727  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | ||||||||||   || ||||||||||| ||||||||||    
T  17842728 cttcaccaaaaaagtcatttttatgacttcaccatagaattttcctt 17842774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 21991755 - 21991610
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||| || |||||| ||| |||||||||||||   ||| || ||||| |||||||||||    
T  21991755 ttaatctgatgaattgatgatactatggggactgaacttttgatgacactgtacaaacagtggggtgttactcgcaacaattttgatgctatagtgttaa 21991656  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | |||| |||||| ||| |||||||| || |||||||||    
T  21991655 cttcaccataaaaatcattctcatgacttcaccctagaattttcct 21991610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 29173655 - 29173540
Alignment:
Q  5 tttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttc 104  Q
    |||||||||| ||||||||||||||||||||||||||||||||| |||||| ||| ||| ||||||||||  ||| || ||||  || ||||||||||||    
T  29173655 tttgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatactacagtgttaacttc 29173556  T
Q  105 acgagaaaagtcattc 120  Q
    || |||||||||||||    
T  29173555 accagaaaagtcattc 29173540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 38258664 - 38258521
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||| |||||||||||||||| |||||| ||  || ||||||||||| ||||||| | |||||||||||||||    
T  38258664 ttaatctgatgaattgatgatactatgaggattgaacttttgatgtcattgtacaaacggtgtggtgttactcattacattttttatgttatagtgttaa 38258565  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| | |||| |||||   || |||||||| || |||||||    
T  38258564 cttcaccaaaaaaatcatttttatgacttcaccgtagaattttc 38258521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 4583032 - 4582894
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| | |||||||||| |||||||||||||||||||| |||||| | | ||||||||||||||  |||||| ||||  |||||| ||||||||||    
T  4583032 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaatagtggggtgttactcacaacatttttgatactatagtattaacttcac 4582933  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     ||||||||||||  | | ||||||||||| ||||||||    
T  4582932 cagaaaagtcattttcgtgacttcaccatagaattttcc 4582894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 22687358 - 22687228
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||  || || ||| ||| ||| ||||||||||  |||||| |||||||||||||||||    
T  22687358 ttaatctgatgaattgatgatactatggggactgaacttttgataccactgcacaaacagtggagtgttactcacaacatttttgatgttatagtgttaa 22687259  T
Q  101 cttcacgagaaaagtcattcgcataacttca 131  Q
    |||||  ||||||||||||| ||| ||||||    
T  22687258 cttcatcagaaaagtcattctcatgacttca 22687228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 31579106 - 31579256
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacaga-----caatggggtgttactcaatacatttatgatgttatagt 95  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||| |||| | |     || |||||||||||||| ||||||| ||||||||||||    
T  31579106 ttaatctgatgaattgatgatactatgaagactgaacttttgatgtcattgtataaattaaacagtggggtgttactcattacatttttgatgttatagt 31579205  T
Q  96 gttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||||||||||| | |||| | ||||  || ||||||||||| |||||||||    
T  31579206 gttaacttcaccaaaaaaattattcttatgacttcaccatagaattttcct 31579256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 12390672 - 12390820
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| |||||||| ||||  |||||||||||||| || ||| ||| |||| ||||||||| |||| || |||||||||||||||||    
T  12390672 ttaatctgatgaattgataatactatggggacataacttttgatgtcactgcacaaacagtgggatgttactcattacacttttgatgttatagtgttaa 12390771  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| | |||||||  ||  || ||||||||||| ||||||||||||    
T  12390772 cttcaccaaaaaagtcgatctgatgacttcaccatagaattttcctttt 12390820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 15612801 - 15612944
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||  ||||||||||||||||| || | |||| ||| ||||||||||||||  ||| || |||||||||||||||||    
T  15612801 ttaatctgatgaattgatgatattatagggactgaacttttgatgccactctacaaacactggggtgttactcataacactt-tgatgttatagtgttaa 15612899  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| ||||| || |||| ||| ||||||||||| ||||||||    
T  15612900 cttcacaagaaacgttattctcatgacttcaccatagaattttcc 15612944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 44413421 - 44413525
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| || |||||||||  ||| ||||||||||| |||||||||| ||| |||||||||||||| || |||| |||||||||||||||||    
T  44413421 ttaatttgatgaattgaagatactatggagaccgaacttttgatttcagtgtacaaacattggggtgttactcactatatttttgatgttatagtgttaa 44413520  T
Q  101 cttca 105  Q
    |||||    
T  44413521 cttca 44413525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25691586 - 25691729
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtg-ttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||| ||||||| || |||||||| |||||| || |||||| ||| || |||  |||||||  | | || ||||||||||||||||    
T  25691586 ttaatatgatgaattgataatactataagaactgaactgttgatgccactgtacaaacagtgaggtaattactcacaatacttttgatgttatagtgtta 25691685  T
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    ||||||||||||||||||||| ||| ||||||||||||||||||    
T  25691686 acttcacgagaaaagtcattctcatgacttcaccataaaatttt 25691729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 32432565 - 32432431
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||  ||||||||||||||||||| |||||| ||||||||||||||||||  |||||| ||     ||||||||||||||||    
T  32432565 tgatgaattgatgatactatggagactgaacttttgatgtcattgtacaaacaatggggtgttactcacaacatttttg-----atagtgttaacttcac 32432471  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     |||||| |||||  | | ||||||||||| |||||||||    
T  32432470 cagaaaaatcattttcgtgacttcaccatagaattttcct 32432431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 33688304 - 33688446
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||   |||||||||||||||| || || ||| ||| | || |||||||||  ||| || |||||||||||||||||    
T  33688304 ttaatctgatgaattgatgatactatagagactgaacttttgatgccactggacaaacagtaggatgttactcataacacttttgatgttatagtgttaa 33688403  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    ||| || ||||||||||||| ||||||||||||||| |||||||    
T  33688404 ctt-accagaaaagtcattctcataacttcaccatataattttc 33688446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 41765120 - 41765266
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||| ||  ||||| ||| ||||||| |||||| |||| || ||||| |||||| || |    
T  41765120 ttaatctgatgaattgatgatactatgaggactggacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgctatagtattga 41765219  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||| |  ||||||||||||| ||| ||||||||||  ||||||||||    
T  41765220 ctttatcagaaaagtcattctcatgacttcaccatggaattttcctt 41765266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 16 - 145
Target Start/End: Original strand, 34362206 - 34362334
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||||||| |||||||||| |||| || |||||| ||| ||||||||||||||  ||| || ||||| ||||||||||||||  | ||||||||    
T  34362206 gatgatactatgagaactgaacttt-gatgccactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttaactttcctagaaaagt 34362304  T
Q  116 cattcgcataacttcaccataaaattttcc 145  Q
    ||||| ||||| ||||||||| ||||||||    
T  34362305 cattctcataatttcaccatagaattttcc 34362334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 10481724 - 10481576
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaat-ggggtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||||||||||| | ||||||| ||||||||||| |||||| ||| | ||||||||||||| || |||| | ||||||||||||||    
T  10481724 ttaatctgatgaattgatgatactataaagactgaatttttgatgtcattgtacaaacagtgggggtgttactcattatattttttatgttatagtgtta 10481625  T
Q  100 acttca-cgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||||||   | ||||||||||| | |||||| |||||| ||||||||||    
T  10481624 acttcattaaaaaaagtcattctcctaactttaccatagaattttcctt 10481576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 9355868 - 9356014
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  | |||| |||||| ||| |||||||||||||| |||||| ||| |||||| || |||| ||||||| | ||| |||||||||||    
T  9355868 ttaatctgatgaattaacgataatatgagaactaaacttttgatgtcactgtacaaacagtggggtattgctcactacattttttatgctatagtgttaa 9355967  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     ||||| | ||  ||||||| ||| ||||||||||||||||||||||    
T  9355968 attcaccaaaatggtcattctcatgacttcaccataaaattttcctt 9356014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 26980442 - 26980325
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||| |||| ||||||||||||||||| || |||||| ||  ||||||||||||||  ||| || ||||| |||| ||||||    
T  26980442 ttaatttgatgaattgatgatattatggggactgaacttttgatgccactgtacaaaccgtggggtgttactcacaacacttttgatgctataatgttaa 26980343  T
Q  101 cttcacgagaaaagtcat 118  Q
    |||||| | |||||||||    
T  26980342 cttcaccataaaagtcat 26980325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 48928339 - 48928466
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| |||||||| ||||||||||||||||| ||  ||||| | | ||||||| |||||| |||| || ||||||||||||||| |    
T  48928339 ttaatctgatgaattgataatactatg-ggactgaacttttgatggcaccgtacaaatagtggggtgctactcactacacttttgatgttatagtgttga 48928437  T
Q  101 cttcacgagaaaagtcattcgcataactt 129  Q
    |||||| ||||||||||||| ||| ||||    
T  48928438 cttcaccagaaaagtcattctcatgactt 48928466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 28 - 143
Target Start/End: Original strand, 27421448 - 27421563
Alignment:
Q  28 aggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataac 127  Q
    ||||||||||||||||||||| |||||| ||| ||| ||||||||||  ||| || ||||||||||||||||||||||| | |||| |||||  ||  ||    
T  27421448 aggactgaacttttgatgtcattgtacaaacagtggagtgttactcacaacacttttgatgttatagtgttaacttcaccaaaaaaatcattatcacgac 27421547  T
Q  128 ttcaccataaaatttt 143  Q
    ||||||||| ||||||    
T  27421548 ttcaccatagaatttt 27421563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 43686153 - 43686015
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| | |||||||||  ||||||||||||||||| || |||||| ||| |||| |||||||||  |||||| |||| ||||||||||||||||||    
T  43686153 tgatgaattgttgatactatagggactgaacttttgatgccattgtacaaacagtggg-tgttactcacaacatttttgatattatagtgttaacttcac 43686055  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
       ||||||||||  | | ||||||||||| |||||||||    
T  43686054 ccaaaaagtcattttcgtgacttcaccatagaattttcct 43686015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 6546638 - 6546494
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||   | | |||||||||||| | |||||| | | |||||||||||||   ||| || ||||| |||||||||||    
T  6546638 ttaatctgatgaattgatgatactatggatagtaaacttttgatgttactgtacaaatagtggggtgttactcgcaacacttttgatgctatagtgttaa 6546539  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| |||||| ||||||  || ||||||||||| ||||||||    
T  6546538 cttcactagaaaaatcattcttatgacttcaccatagaattttcc 6546494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11071325 - 11071182
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||| |||||| ||| ||| |||||||||  || |||| ||||| ||||||  |||    
T  11071325 ttaatctgatgaattgatgatactatgagaactgaacttttgatgtcactgtacaaacagtggagtgttactcgctatatttttgatgatatagtactaa 11071226  T
Q  101 cttcacgagaaaagt-cattcgcataacttcaccataaaatttt 143  Q
    ||| || | |||| | ||||  ||| ||||||||||| ||||||    
T  11071225 ctttaccaaaaaaatacattttcatgacttcaccatagaatttt 11071182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 12165871 - 12165753
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||    ||||| ||||||||||| || |||||| ||| ||||||||||||||  ||| ||  |||| |||||||||||    
T  12165871 ttaatctgatgaattgatgatacttaagggacttaacttttgatgccactgtacaaacagtggggtgttactcacaacactttggatgctatagtgttaa 12165772  T
Q  101 cttcacgagaaaagtcatt 119  Q
    |||||| ||||||||||||    
T  12165771 cttcaccagaaaagtcatt 12165753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 143
Target Start/End: Complemental strand, 23111301 - 23111167
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||| || |  ||||||||||||| || |||||| | | ||| ||||||||||  | |||| ||||||||||||||||||||||| |    
T  23111301 atgaattgatgatactacgatggttgaacttttgatgccattgtacaaatagtggtgtgttactcacaatatttttgatgttatagtgttaacttcacca 23111202  T
Q  109 gaaaagtcattcgcataacttcaccataaaatttt 143  Q
    ||||| |||||  ||| ||||||||| | ||||||    
T  23111201 gaaaaatcattttcatgacttcaccacagaatttt 23111167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 16 - 106
Target Start/End: Complemental strand, 38053590 - 38053500
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    ||||| |||||||| |||||||||||||||||| |||||| ||| | |||| ||||||| ||||||| | |||||||||| ||||||||||    
T  38053590 gatgacactatgagaactgaacttttgatgtcattgtacaaacagtagggttttactcattacattttttatgttatagtattaacttcac 38053500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 10359263 - 10359400
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||| || |||||||||||||||||| |||| | | | | || ||||||||| |||| || ||||| ||||   |||| || ||    
T  10359263 tgatgaattgatgatactatcag-actgaacttttgatgtcactgtataaatagtaggatgttactcactacacttttgatgctataagattaattttac 10359361  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     ||||||||||||  ||| ||||||||||| ||||||||    
T  10359362 cagaaaagtcattatcatgacttcaccatagaattttcc 10359400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 35353228 - 35353122
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaa-cttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| | |||||||||| |||| ||| ||||||||  ||  ||||| ||||||||||| |||||| |||| || ||||| |||||||||     
T  35353228 ttaatctgatgaattggtgatactatggggacagaaacttttgattccatcgtacaaacaatggggtgctactcactacacttttgatgctatagtgttg 35353129  T
Q  100 acttcac 106  Q
    |||||||    
T  35353128 acttcac 35353122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 40381988 - 40381938
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||| ||||||||||||| |||||||||||| || ||||||||||    
T  40381988 ttaacttcaccagaaaagtcattctcataacttcaccgtagaattttcctt 40381938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 8299245 - 8299192
Alignment:
Q  90 tatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    ||||||||||||||||| ||||||||||||  | | ||||||||||| ||||||    
T  8299245 tatagtgttaacttcaccagaaaagtcattttcgtgacttcaccatagaatttt 8299192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Original strand, 23402371 - 23402419
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||| ||||||||||||| ||| ||||| ||||| ||||||||    
T  23402371 ttaacttcaccagaaaagtcattctcatgacttcgccatagaattttcc 23402419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 50 - 105
Target Start/End: Complemental strand, 37704238 - 37704182
Alignment:
Q  50 tgtacagacaatggggtgttactcaataca-tttatgatgttatagtgttaacttca 105  Q
    |||||| |||||||||||||||||| |||| ||| | ||| ||||||||||||||||    
T  37704238 tgtacaaacaatggggtgttactcactacatttttttatgctatagtgttaacttca 37704182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 56
Target Start/End: Complemental strand, 43925206 - 43925166
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacag 56  Q
    ||||||||||||  ||||||||||||||||||| |||||||    
T  43925206 gatgatactatgtagactgaacttttgatgtcattgtacag 43925166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 65 - 117
Target Start/End: Complemental strand, 44598419 - 44598367
Alignment:
Q  65 gtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtca 117  Q
    ||||||||||  |||||| |||| ||||||| ||||||||||||||| |||||    
T  44598419 gtgttactcacaacatttttgatattatagtattaacttcacgagaagagtca 44598367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 9e-40; HSPs: 55)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 9e-40
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 25701124 - 25701271
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| | |||||||||||| |||| || |||||||||| ||||||    
T  25701124 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcactgtacaaacagtagggtgttactcactacacttttgatgttataatgttaa 25701223  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||| || | ||||||||||  ||| |||||||||||||||||||||||    
T  25701224 ctttaccaaaaaagtcattatcatgacttcaccataaaattttccttt 25701271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 34948164 - 34948306
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| || | |||| ||| ||||||||||||||  ||| || |||||||||||||||||    
T  34948164 ttaatatgatgaattgatgatattatgaggactgaacttttgatgccactttacaaacagtggggtgttactcacaacacttttgatgttatagtgttaa 34948263  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||| | ||||||||||||| ||| ||||||||||||||||||    
T  34948264 cttcgccagaaaagtcattctcatgacttcaccataaaatttt 34948306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 29584267 - 29584413
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||| || |||||| ||| || |||||||||||| || |||  ||||||||||||||||    
T  29584267 ttaatctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtgaggtgttactcaacactttt--gatgttatagtgttaa 29584364  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| ||||||||||||| ||  ||||||||||| ||||||||||||    
T  29584365 cttcaccagaaaagtcattcccacgacttcaccatagaattttcctttt 29584413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 55477958 - 55478108
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaa----tggggtgttactcaatacatttatgatgttatagtg 96  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||||    ||| |||||||||  ||||||| |||||||||||||    
T  55477958 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacaaacagtggagtgttactcgttacatttttgatgttatagtg 55478057  T
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||| | |||| |||||| ||| ||||||||||| ||||||||||    
T  55478058 ttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttcctt 55478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 36493755 - 36493897
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||||| |||||| |||||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| || |||| ||||| |||||| ||||    
T  36493755 ttaatttaatgaattgatgatactatggggactgaacttttgatgtcactgtacaaacaatggggtgttactcactatatttttgatggtatagtattaa 36493854  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | |||||| |||  ||| ||||||||||| ||||||    
T  36493855 cttcaccaaaaaagttattttcatgacttcaccatagaatttt 36493897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 19089520 - 19089664
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| | |||| ||| |||||||||||||| |||| || |||| ||||||||||||    
T  19089520 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattacaattttgatattatagtgttaa 19089619  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  | |||||| ||||  || ||||||||||| ||||||||    
T  19089620 cttcatcaaaaaagttattcttatgacttcaccatagaattttcc 19089664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 37663808 - 37663951
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| |||| || | ||||  |||||||||    
T  37663808 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacagttttaatgt--tagtgttaa 37663905  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||  | |||||||||||  || ||||||||||| |||||||||    
T  37663906 cttcatcaaaaaagtcattcttatgacttcaccatagaattttcct 37663951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 879615 - 879760
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||| || | |||||||||||||| |||||| |||||| ||||||||||| ||||||| ||||||||||||||| |    
T  879615 ttaatctgatgagttgatgatactatgaagattaaacttttgatgtcattgtacaaacaatgaggtgttactcattacatttttgatgttatagtgttta 879714  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | |||| | |||| ||| |||||||| ||||||||||||    
T  879715 cttcaccaaaaaaattattctcatgacttcaccttaaaattttcct 879760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 25184257 - 25184112
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||| || |||||||| ||||||| |||||| ||| | | |||||||||| ||||||| |||||||||||||||||    
T  25184257 ttaatctgatgagttgatgatactatgaagattgaactttggatgtcattgtacaaacagtagagtgttactcattacatttttgatgttatagtgttaa 25184158  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | || |||||||| ||| ||||||||||| |||||||||    
T  25184157 cttcaccaaaatagtcattctcatgacttcaccatagaattttcct 25184112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 4598136 - 4597994
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||  ||| | ||||||||||||||||| || |||||| ||| ||||||||||||||  ||| || |||||||||||||||||    
T  4598136 ttaatatgatgaattgatgagtctaaggggactgaacttttgatgccactgtacaaacagtggggtgttactcacaacactt-tgatgttatagtgttaa 4598038  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| |||||||||||||  || |||||||||||||||||||    
T  4598037 cttcaccagaaaagtcattctaatgacttcaccataaaattttc 4597994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 8 - 147
Target Start/End: Original strand, 34361566 - 34361704
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    ||||||| ||||||| ||||||| |||||||||| |||||| | |||| ||| |||||||||||||| ||||||| | |||||||||||||||||||||     
T  34361566 gatgaattgatgatattatgagg-ctgaacttttaatgtcattctacaaacagtggggtgttactcattacattttttatgttatagtgttaacttcacc 34361664  T
Q  108 agaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    | |||||||||||  || ||||||||||| ||||||||||    
T  34361665 aaaaaagtcattcttatgacttcaccatagaattttcctt 34361704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 9 - 148
Target Start/End: Original strand, 35021110 - 35021249
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||| ||||||  ||||||||| | || |||||| ||| ||| |||||||||| ||||||| |||||||||| |||||||||||| |    
T  35021110 atgaattgatgatactacgaggacgaaacttttgacgccaatgtacaaacagtggtgtgttactcactacatttttgatgttataatgttaacttcacca 35021209  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||||||||  ||| ||||||||||| |||||||||||    
T  35021210 gaaaagtcattttcatgacttcaccatagaattttccttt 35021249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 16 - 143
Target Start/End: Complemental strand, 47253877 - 47253751
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||||||||||||||||||||||||||||| |||| | |||||||| |||||||||  ||| || ||||| ||||||||||||||||| | ||||||    
T  47253877 gatgatactatgaggactgaacttttgatgtcactgtataaacaatggg-tgttactcacaacacttttgatgatatagtgttaacttcaccaaaaaagt 47253779  T
Q  116 cattcgcataacttcaccataaaatttt 143  Q
    ||||| ||| ||||||||||| ||||||    
T  47253778 cattctcatgacttcaccatagaatttt 47253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 27396760 - 27396618
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||  |||||||||||||| |||||| ||| | ||||||||||||  ||| || | ||| |||| ||||||    
T  27396760 ttaatctgatgaattgatgatactatgaggacgaaacttttgatgtcattgtacaaacagtagggtgttactcataacacttttaatgctataatgttaa 27396661  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| ||||||||||||| ||| ||||||||||| ||||||    
T  27396660 cttcaccagaaaagtcattctcatgacttcaccatagaatttt 27396618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 39398047 - 39397913
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||  || ||||||||||||||||||| |||||| ||||||||||||||||||  ||| || | ||||||||||||||||||||| | ||||||    
T  39398047 gatgatactgagaagactgaacttttgatgtcactgtacaaacaatggggtgttactcacaacacttttaatgttatagtgttaacttcaccataaaagt 39397948  T
Q  116 cattcgcataacttcaccataaaattttcctttta 150  Q
    |||||  || ||||||||||| |||||||| ||||    
T  39397947 cattctaatgacttcaccatagaattttccattta 39397913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 7703646 - 7703517
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||||| ||||||||||||||||||||  ||||| ||| |||||||||||| |  ||| || ||||||||||||||||||||||| ||||||||    
T  7703646 gatgatactatggggactgaacttttgatgtcaccgtacaaacagtggggtgttactgacaacacttttgatgttatagtgttaacttcaccagaaaagt 7703547  T
Q  116 cattcgcataacttcaccataaaattttcc 145  Q
    ||||| ||| |||| | |||| ||||||||    
T  7703546 cattctcatgactttaacatagaattttcc 7703517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 19440715 - 19440860
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||| || |||||| ||  ||| |||||| ||| ||||||| |||||||||||||||||    
T  19440715 ttaatctgatgaattgatgatattatgaggactgaacttttgatgccattgtacaaacggtggagtgttaatcattacatttttgatgttatagtgttaa 19440814  T
Q  101 cttcacgagaaaagtcattcgcataac-ttcaccataaaattttcc 145  Q
    | |||| | ||||||||||| ||| || ||||||||| ||||||||    
T  19440815 catcaccaaaaaagtcattctcatgactttcaccatagaattttcc 19440860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 8 - 145
Target Start/End: Original strand, 28003060 - 28003197
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||||| ||| ||| ||  |||| | |||| || ||||| ||||||||| |||||||     
T  28003060 gatgaattgatgatactatgatgactgaacttttgatgtcactgtacaaacagtggagtactactgactacacttttgatgctatagtgttgacttcacc 28003159  T
Q  108 agaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||||||| ||| ||||||||||| ||||||||    
T  28003160 agaaaagtcattctcatgacttcaccatagaattttcc 28003197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 38011998 - 38011850
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| ||| |||| ||||||||||||||||| ||  ||||| ||| ||||||| || ||| |||| || ||||||||||||||| |    
T  38011998 ttaatctgatgaattgataatattatggggactgaacttttgatggcaccgtacaaacagtggggtgctattcactacacttttgatgttatagtgttga 38011899  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| ||||||||||||| ||| | ||||||||| ||||||||||||    
T  38011898 cttcaccagaaaagtcattctcatgatttcaccatagaattttcctttt 38011850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 7 - 145
Target Start/End: Original strand, 55241177 - 55241315
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||| ||| |||||||||||| ||||||||||||||||| || |||||| ||| |||||||||||||   ||| || ||||  |||||| ||||||||||    
T  55241177 tgataaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcgcaacaattttgataatatagtattaacttcac 55241276  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     ||||||||||||| ||| ||||||||||| ||||||||    
T  55241277 tagaaaagtcattctcatgacttcaccatagaattttcc 55241315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 42199873 - 42199728
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||| |||||||||| |||||| | |||| | |||||||| ||||||| ||||||| |||||||||||| ||||    
T  42199873 ttaatctgatgaattgatgatactatgagggctgaactttttatgtcattctacaaataatggggtattactcattacatttttgatgttatagtattaa 42199774  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | |||| ||||||  || | ||||||||| | |||||||    
T  42199773 cttcaccaaaaaaatcattcttatgatttcaccatagatttttcct 42199728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 49376111 - 49375966
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||| || ||||||  || ||||||||||||||  ||| || ||||| |||| ||||||    
T  49376111 ttaatctgatgaattgatgatactatgaagactgaacttttgatgccactgtacaagcagtggggtgttactcacgacacttttgatgctataatgttaa 49376012  T
Q  101 cttcacgag-aaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| || ||||||||||| ||| |||||||| || ||||||||    
T  49376011 cttcaccagaaaaagtcattctcatgacttcaccgtagaattttcc 49375966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 17167851 - 17167715
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    ||||||||  |||||||||||  || |||||||||||||||| |||||| ||| ||||||||||||||  |||||| |||| ||||| |||||||||||     
T  17167851 tgatgaattaatgatactatggagaatgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcat 17167752  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     ||||||||||||  | ||||||||||||| ||||||    
T  17167751 cagaaaagtcattttcgtaacttcaccatagaatttt 17167715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 17173428 - 17173292
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    ||||||||  |||||||||||  || |||||||||||||||| |||||| ||| ||||||||||||||  |||||| |||| ||||| |||||||||||     
T  17173428 tgatgaattaatgatactatggagattgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatattataatgttaacttcat 17173329  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     ||||||||||||  | ||||||||||||| ||||||    
T  17173328 cagaaaagtcattttcgtaacttcaccatagaatttt 17173292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 32912653 - 32912793
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||| ||| ||||||| ||||||  ||||||||||||| ||| | |||| | | | |||||||||||| ||||||| |||||||||||||||||||||||    
T  32912653 tgataaattgatgatattatgagtgctgaacttttgatatcattctacaaatactagggtgttactcattacatttttgatgttatagtgttaacttcac 32912752  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     | |||||||||||  || ||||||||||| ||||||||||    
T  32912753 caaaaaagtcattcttatgacttcaccatagaattttcctt 32912793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 23761216 - 23761097
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||| | |||| ||| || |||||||||||  ||| || |||||||||||||||||    
T  23761216 ttaatctgatgaattgatgatactatggggactgaacttttgatgtcactatacaaacagtgaggtgttactcacaacacttttgatgttatagtgttaa 23761117  T
Q  101 cttcacgagaaaagtcattc 120  Q
    ||| || |||| ||||||||    
T  23761116 ctttacaagaatagtcattc 23761097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 17 - 146
Target Start/End: Complemental strand, 37287862 - 37287732
Alignment:
Q  17 atgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttca-cgagaaaagt 115  Q
    |||||| |||||||| ||||||||||||| || |||||| ||| ||||||||||||||  ||| || |||||||||||||||||||| | | | ||||||    
T  37287862 atgatattatgaggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttgatgttatagtgttaactttaccaaaaaaagt 37287763  T
Q  116 cattcgcataacttcaccataaaattttcct 146  Q
    ||||| ||| ||||||||||| |||||||||    
T  37287762 cattctcattacttcaccatagaattttcct 37287732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 35025670 - 35025800
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||| ||||||||||||||||||||||  ||| | ||| ||||||| |||||| |||| || ||||| ||||||||| ||||||| |||||| |    
T  35025670 gatgatactacgaggactgaacttttgatgtcaacgtataaacagtggggtgctactcactacacttttgatgctatagtgttgacttcaccagaaaaat 35025769  T
Q  116 cattcgcataacttcaccataaaattttcct 146  Q
    ||||  ||| |||||| |||| |||||||||    
T  35025770 cattttcatgacttcagcatagaattttcct 35025800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 30002706 - 30002838
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||| || ||||||||||||||||||| |||||| ||| || |||||||||||  ||| || ||||| || |||||||||||||| |||||| |    
T  30002706 gatgatactaagaagactgaacttttgatgtcactgtacaaacagtgaggtgttactcacaacacttttgatgctacagtgttaacttcaccagaaaaat 30002805  T
Q  116 cattcgcataacttcaccataaaattttccttt 148  Q
    ||||   || ||||||||||| | |||||||||    
T  30002806 cattttaatgacttcaccatagagttttccttt 30002838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Original strand, 54499305 - 54499425
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagt-gtacagacaatggggtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| |||||||||||   ||||||||||||||||||| | ||||| ||  ||||||||||||||  ||| || ||||| ||||||||||    
T  54499305 ttaatatgatgaattgatgatactatagagactgaacttttgatgtcattagtacaaacggtggggtgttactcacaacacttttgatgctatagtgtta 54499404  T
Q  100 acttcacgagaaaagtcattc 120  Q
    ||||||| |||||||||||||    
T  54499405 acttcaccagaaaagtcattc 54499425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 50764866 - 50764732
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||||||||| ||||||||||||||||  ||||| ||| ||||||||||||||  ||| || ||||||  ||||||||||||||  |    
T  50764866 atgaattgatgatactatgaggattgaacttttgatgtcaccgtacaaacagtggggtgttactcacaacacttttgatgt--tagtgttaacttcatca 50764769  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
     |||||| |||| ||| ||||   ||||||||||||||||    
T  50764768 aaaaagttattctcatgactt---cataaaattttccttt 50764732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 149
Target Start/End: Complemental strand, 4205221 - 4205112
Alignment:
Q  40 ttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaa 139  Q
    ||||||||| |||||| ||| |||||||||| |||  |||||| |||| |||||||||||||||||  ||||||||||||  | | ||||||||||| ||    
T  4205221 ttgatgtcattgtacaaacagtggggtgttattcagaacatttttgatattatagtgttaacttcatcagaaaagtcattttcctgacttcaccatagaa 4205122  T
Q  140 ttttcctttt 149  Q
    ||||||||||    
T  4205121 ttttcctttt 4205112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 6864179 - 6864038
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||| ||| ||||||||||||||||||| ||||||||||  | |||||| | | | || ||||| ||| || |||| ||||||||||||| |||    
T  6864179 ttaatctgataaattgatgatactatgaggactggacttttgatgctattgtacaaaaagttggatgttattcattaaatttttgatgttatagtgataa 6864080  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattt 142  Q
    |||||| | ||||||||||| ||| || |||||||| |||||    
T  6864079 cttcaccaaaaaagtcattctcatgacatcaccatacaattt 6864038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32579590 - 32579441
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacag---acaatggggtgttactcaatacatttatgatgttatagtgt 97  Q
    ||||| |||||||  ||| |||||||||| ||| ||||||||||| ||  |||||    ||| ||||||| |||||| | || || |||||||||| |||    
T  32579590 ttaatctgatgaactgataatactatgag-actaaacttttgatggcaccgtacaacaaacactggggtgctactcactgcacttttgatgttataatgt 32579492  T
Q  98 taacttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    | ||||||| ||||||||||||| || ||||||||||||||||||||||||    
T  32579491 tgacttcaccagaaaagtcattctcagaacttcaccataaaattttccttt 32579441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 4934269 - 4934351
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaat-ggggtgttactcaatacattt 82  Q
    ||||| |||||||  |||||||||||||||| ||||||||||||| ||||||||| ||||| ||||||||||||| |||||||    
T  4934269 ttaatctgatgaaatgatgatactatgaggattgaacttttgatgccagtgtacaaacaatgggggtgttactcactacattt 4934351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 131
Target Start/End: Original strand, 5048040 - 5048162
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||||| | |||||||||||||| |||  ||||| ||| || |||  |||||| |||| || ||||||||||| ||| ||||||| |    
T  5048040 atgaattgatgatactatgggaactgaacttttgatatcatcgtacaaacagtgtggtcctactcactacacttttgatgttatagagttgacttcacca 5048139  T
Q  109 gaaaagtcattcgcataacttca 131  Q
    ||||| |||||| ||||||||||    
T  5048140 gaaaaatcattctcataacttca 5048162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 63 - 147
Target Start/End: Original strand, 7152235 - 7152319
Alignment:
Q  63 gggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||||| || | || |||||||||| ||||||||| || |||||||||||| |||| ||||||||||| ||||||||||    
T  7152235 gggtgttactcactatacttttgatgttataatgttaactttaccagaaaagtcattagcatgacttcaccatagaattttcctt 7152319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 33341542 - 33341397
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttact--caata--catttatgatgttatagtg 96  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||| || |||||| ||| ||||||||| ||  ||| |  || || ||||| |||||||    
T  33341542 ttaatctgatgaattgatgatactatg-ggactgaacttttgatgccactgtacaaacagtggggtgttcctcgcaacaatcaattttgatgatatagtg 33341444  T
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||| ||||| |||||| |||||| ||| ||||||| ||| ||||||    
T  33341443 ttaatttcaccagaaaaatcattctcatgacttcactatagaatttt 33341397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 9139389 - 9139245
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | |||||||||||| ||| ||||||||| |||||| |||||| ||  |||||||||||||| |  |||| | ||| ||||  |||||    
T  9139389 ttaatctgatgagttgatgatactatggggattgaactttttatgtcactgtacaaacggtggggtgttactcact--attttttatgctataacgttaa 9139292  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | |||||||| |  ||| ||||||||||| ||||||||||    
T  9139291 cttcaccaaaaaagtcaatttcatgacttcaccatagaattttcctt 9139245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 84 - 147
Target Start/End: Complemental strand, 17272072 - 17272009
Alignment:
Q  84 tgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||||||||||||||||||||||| ||||||||||||| ||  ||||||||||| ||||||||||    
T  17272072 tgatgttatagtgttaacttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 17272009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 50697385 - 50697239
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| ||| | |||||||||||||||| |||||| ||  | |||||||||||  || |||| | ||||||||||||| |    
T  50697385 ttaatctgatgaattgatgatacta-gagaattgaacttttgatgtcattgtacaaacggtagggtgttactcgttatattttttatgttatagtgttta 50697287  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||| | |||| |||||   || |||||||| || |||||||||||    
T  50697286 cttcactaaaaaaatcatttttatgacttcaccgtagaattttccttt 50697239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 61 - 147
Target Start/End: Complemental strand, 4396410 - 4396324
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||||||| ||||||| | ||||||||||||||||||||| | ||||||||||   || ||||||| ||| ||||||||||    
T  4396410 tggggtgttactcattacattttttatgttatagtgttaacttcactaaaaaagtcatttttatgacttcactatagaattttcctt 4396324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Complemental strand, 32592237 - 32592096
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | |||||||||||||||||||| | |||| ||| ||| |||||||||   ||| || ||||  | |||||||||    
T  32592237 ttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactatacaaacagtggagtgttactctcaacacttttgatactgtagtgttaa 32592138  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattt 142  Q
    |||||  | ||||||||||   || ||||||| |||||||||    
T  32592137 cttcatcaaaaaagtcattataatgacttcacaataaaattt 32592096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 87 - 143
Target Start/End: Complemental strand, 52516655 - 52516599
Alignment:
Q  87 tgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||||||||||||||||| | ||||||||||| ||| ||||||||||||||||||    
T  52516655 tgttatagtgttaacttcaccataaaagtcattctcatgacttcaccataaaatttt 52516599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 30 - 149
Target Start/End: Complemental strand, 3042726 - 3042607
Alignment:
Q  30 gactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataactt 129  Q
    ||||||| ||||||||||| |||| | ||  |||||| ||||||| |||||||   ||||||||||||||||||||| | |||| |||||   || | ||    
T  3042726 gactgaatttttgatgtcattgtataaacggtggggtattactcattacattttgtatgttatagtgttaacttcaccaaaaaaatcatttttatgattt 3042627  T
Q  130 caccataaaattttcctttt 149  Q
    ||||||| ||||||||||||    
T  3042626 caccatagaattttcctttt 3042607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46888224 - 46888338
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  | |||| |||| ||||||||||||||||| |  |||||| | | |||||| ||||||| |||| || |||||||||||| ||||    
T  46888224 ttaatctgatgaattaacgatagtatggggactgaacttttgatgccgctgtacaaatagtggggtattactcactacaattttgatgttatagtattaa 46888323  T
Q  101 cttcacgagaaaagt 115  Q
    |||||  ||||||||    
T  46888324 cttcatcagaaaagt 46888338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 37775811 - 37775670
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | ||   |||||||||||| || |||||| ||| ||||||||||||||  |||||| | || |||||||| |||    
T  37775811 ttaatctgatgaattgatgatactaaggggg--gaacttttgatgccactgtacaaacagtggggtgttactcacaacatttttaatattatagtgctaa 37775714  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| | |||| |||||   || |||||||| || |||||||    
T  37775713 cttcaccaaaaaaatcattttaatgacttcaccgtagaattttc 37775670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 53124371 - 53124287
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||||||| || |||| ||||||||||||||||||||||| | |||| |||||   || |||||| |||| ||||||||    
T  53124371 tggggtgttactcattatatttttgatgttatagtgttaacttcaccaaaaaaatcattttaatgacttcatcatataattttcc 53124287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Complemental strand, 2704560 - 2704510
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||| ||||||||||||  ||| ||||||||||||||||||||||    
T  2704560 ttaacttcaccagaaaagtcattttcatgacttcaccataaaattttcctt 2704510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 38812260 - 38812310
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||| ||||||||||||| ||| ||||||||||| ||||||||||    
T  38812260 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 38812310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 143
Target Start/End: Original strand, 20097485 - 20097537
Alignment:
Q  91 atagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||| ||||||||||| ||||||||||||| ||| ||||||||||| ||||||    
T  20097485 atagggttaacttcaccagaaaagtcattctcatgacttcaccatagaatttt 20097537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 33816600 - 33816742
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||| ||| ||||||||||||  |||||||||||||||| ||  ||| | | | || |||| |||||| |||| || ||||| || | |||| |    
T  33816600 ttaatctgataaattgatgatactatggagactgaacttttgatgccaccgtataaatagtgaggtgctactcactacacttttgatgctacaatgttga 33816699  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| |||||| |||||| ||| |||| | |||| ||||||    
T  33816700 cttcaccagaaaaatcattctcatgacttaagcatataatttt 33816742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 139
Target Start/End: Original strand, 52195645 - 52195687
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaa 139  Q
    |||||||||  ||||||||||||| ||||||||||||||||||    
T  52195645 ttaacttcatcagaaaagtcattctcataacttcaccataaaa 52195687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 1815445 - 1815409
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaac 37  Q
    ||||| |||||||| ||||||||||||||||||||||    
T  1815445 ttaatatgatgaattgatgatactatgaggactgaac 1815409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 38811861 - 38811813
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||| |||||| |||||| ||| ||||||||||| ||||||||    
T  38811861 ttaacttcaccagaaaaatcattctcatgacttcaccatagaattttcc 38811813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 83; Significance: 4e-39; HSPs: 56)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 699294 - 699152
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||| ||||||||||||||||||| |||||| ||| |||||||||||||| || |||| | ||| |||||||||||    
T  699294 ttaatctgatgaattgatgatattatgatgactgaacttttgatgtcactgtacaaacagtggggtgttactcactagattttttatgctatagtgttaa 699195  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||  ||||||||||||| ||||||||||||||||||||||    
T  699194 cttcatcagaaaagtcattctcataacttcaccataaaatttt 699152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24886248 - 24886099
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||| |||||| ||| |||||||||||||| ||||||| |||||||||||| ||||    
T  24886248 ttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatagtattaa 24886149  T
Q  101 cttcac--gagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||||||   | ||||||||||| ||| | |||||||||||||||||||||    
T  24886148 cttcaccaaaaaaaagtcattctcatgatttcaccataaaattttccttt 24886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 8741917 - 8742065
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatgggg-tgttactcaatacatttatgatgttatagtgtta 99  Q
    |||||||||||||| ||||||||||||  |||||||||||||||| || |||||| ||||||||| |||||||||  ||| || ||||| ||||||||||    
T  8741917 ttaatttgatgaattgatgatactatggagactgaacttttgatgccattgtacaaacaatgggggtgttactcacaacacttttgatgctatagtgtta 8742016  T
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||||||| ||||||||||||| ||| ||||||||||| |||||||||||    
T  8742017 acttcaccagaaaagtcattctcatgacttcaccatagaattttccttt 8742065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 5112344 - 5112495
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||| || |||||| ||| |||||||||||||| || |||| | |||||||||| ||||    
T  5112344 ttaatttaatgaattgatgatactatggggactgaacttttgatgccactgtacaaacagtggggtgttactcactatattttttatgttatagtattaa 5112443  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttttata 152  Q
    |||||| | ||||||||||  ||| |||||||||||||||||||||| ||||    
T  5112444 cttcaccaaaaaagtcattttcatgacttcaccataaaattttccttgtata 5112495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 35826529 - 35826660
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||||||||||||||||||||||||||||| |||||| ||||||  |||||||||| ||||||| |||||||||||| |||||||||| | ||||||    
T  35826529 gatgatactatgaggactgaacttttgatgtcactgtacaaacaatgaagtgttactcagtacatttttgatgttatagtattaacttcacaaaaaaagt 35826628  T
Q  116 cattcgcataacttcaccataaaattttcctt 147  Q
    ||||  ||| ||||||||||| ||||||||||    
T  35826629 cattatcatgacttcaccatagaattttcctt 35826660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 38528268 - 38528413
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||| |||||||||||||||||| |||| | |||||||||||||||||| |||| || |||||||||||||||||    
T  38528268 ttaatctgatgaattgatgatactatgag-actgaacttttgatgtcactgtataaacaatggggtgttactcattacaattttgatgttatagtgttaa 38528366  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||  ||||||  ||||  ||| ||||||||||| ||||||||||    
T  38528367 cttcatcagaaaaaccattttcatgacttcaccatagaattttcctt 38528413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 9200377 - 9200232
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| ||||||| |||||||||||||| |||||| ||  ||||||||||||||  ||| || |||||||||||||||||    
T  9200377 ttaatatgatgaattgatgatactaagaggactaaacttttgatgtcactgtacaaactgtggggtgttactcacaacacttttgatgttatagtgttaa 9200278  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| |||||||| |||   || |||||||||||||||||||||    
T  9200277 cttcaccagaaaagttattttaatgacttcaccataaaattttcct 9200232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 19120003 - 19119855
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||| |||||| |||||||||||||||||||| |||||| ||| ||||||||||||    ||| || ||||| |||||||||||    
T  19120003 ttaatctgatgaattgatgacactatggggactgaacttttgatgtcactgtacaaacagtggggtgttactagcaacacttttgatgctatagtgttaa 19119904  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||||||||    
T  19119903 cttcaccacaaaagtcattctcatgacttcaccatagaattttcctttt 19119855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 7 - 150
Target Start/End: Original strand, 22974119 - 22974262
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||| | ||||||| |||||| | |||||||||||||| | |||||| ||| |||| ||||||||| ||| ||| |||||||||||||||||||||||    
T  22974119 tgatgagttgatgataatatgagaattgaacttttgatgttattgtacaaacagtgggatgttactcattacttttttgatgttatagtgttaacttcac 22974218  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttta 150  Q
     | |||| |||||| ||||||||||||||| |||||||||||||    
T  22974219 caaaaaaatcattctcataacttcaccatagaattttcctttta 22974262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 22980937 - 22980794
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||||| ||  || ||| |||||| ||||||| |  |||| ||||  |||||||||||    
T  22980937 ttaatctgatgaattgatgatactatggggactgaacttttgatgtcattgctcaaacagtggggtattactcactgtatttttgatactatagtgttaa 22980838  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| ||||||||||||| |||||||||| ||||||||||||    
T  22980837 cttcaccagaaaagtcattctcataacttcatcataaaattttc 22980794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 27330448 - 27330304
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||| || |||||| ||| |  |||||||||||| || |||  ||||||||||||||||    
T  27330448 ttaatctgatgaattgatgatactatgaagactgaacttttgatgccattgtacaaacagtaaggtgttactcaacactttt--gatgttatagtgttaa 27330351  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| ||||||||||||| ||  ||||||||||| ||||||||||    
T  27330350 cttcaccagaaaagtcattcccacgacttcaccatagaattttcctt 27330304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 1429176 - 1429321
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||||||||  ||||||| |||||||| ||||||||| ||| |||||||||||||| || |||| ||||| |||||||||||    
T  1429176 ttaatttgatgaattgatgatactatggagactgaatttttgatgccagtgtacaaacagtggggtgttactcactatatttttgatgctatagtgttaa 1429275  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | || |||||||  ||| ||||||||||| | |||||||    
T  1429276 cttcaccaaaagagtcattttcatgacttcaccatagatttttcct 1429321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 15724632 - 15724490
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||| |||| |||||||||||| ||||||| |||| | ||| ||||||||||||||  | | || |||||||||||||||||    
T  15724632 ttaatttgatgaattgatgatattatg-ggactgaacttt-gatgtcattgtataaacagtggggtgttactcacaaaacttttgatgttatagtgttaa 15724535  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||| ||||||||||||||| ||||||||    
T  15724534 cttcaccaaaaaagtcattctcataacttcaccatagaattttcc 15724490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 26268218 - 26268087
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||| ||||||||||||||  ||||| ||| ||||||||||||||| ||| || ||||| |||||||||||    
T  26268218 ttaatctgatgaattgatgatactatgtggactaaacttttgatgtcaccgtacaaacagtggggtgttactcaaaacacttttgatgctatagtgttaa 26268119  T
Q  101 cttcacgagaaaagtcattcgcataacttcac 132  Q
    |||||| |||||| |||||| ||| |||||||    
T  26268118 cttcaccagaaaaatcattctcatgacttcac 26268087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30969355 - 30969485
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||| | | | ||||||||||||||  ||| || |||||||||||||||||    
T  30969355 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtataaatagtggggtgttactcacaacacttttgatgttatagtgttaa 30969454  T
Q  101 cttcacgagaaaagtcattcgcataacttca 131  Q
    |||||| ||| || |||||| ||| ||||||    
T  30969455 cttcaccagataaatcattctcatgacttca 30969485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 39572963 - 39572818
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||||||||| |||||||||||||||||| || ||| ||| ||| ||||||||||  |||||| | || ||||||| ||||    
T  39572963 ttaatctgatgaatttatgatactatgagaactgaacttttgatgtcactgcacaaacagtggagtgttactcacaacattttttatattatagtattaa 39572864  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||| || ||||||||||||| ||| ||||||||||| |||||||||    
T  39572863 cttaactagaaaagtcattctcatgacttcaccatagaattttcct 39572818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 7693366 - 7693230
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||| ||||| ||||||||||||| || |||||| ||| |||| |||||||||  ||| || ||||||||||||||||||||||| |    
T  7693366 atgaattgatgatactaagaggattgaacttttgatgccactgtacaaacagtgggatgttactcacaacacttttgatgttatagtgttaacttcacca 7693267  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||||   || ||||||||||| ||||||||    
T  7693266 gaaaagtcattttaatgacttcaccatagaattttcc 7693230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 14919559 - 14919707
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | ||||||||||||||||||||||||||||||||| | || | ||| || ||||||||||| ||||||| |||||||||| ||||||    
T  14919559 ttaatatgatgagttgatgatactatgaggactgaacttttgatgtcattatataaacagtgaggtgttactcattacatttttgatgttataatgttaa 14919658  T
Q  101 cttca-cgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||||| | | |||| | |||| ||| ||||||||||| |||||||||||    
T  14919659 cttcatcaaaaaaaataattctcatgacttcaccatataattttccttt 14919707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 27318518 - 27318650
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||| |||| ||| |||||||||||||| |||||| ||| ||| |||||||||| ||||||| | ||||| |||||||||    
T  27318518 ttaatatgatgaattgatgatactgtgagaactaaacttttgatgtcattgtacaaacagtggtgtgttactcactacattttttatgttttagtgttaa 27318617  T
Q  101 cttcacgagaaaagtcattcgcataacttcacc 133  Q
    |||||| |||||| |||||| ||| ||||||||    
T  27318618 cttcaccagaaaaatcattctcatgacttcacc 27318650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 36860561 - 36860421
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| | |||||||||| |||||||||||||||||||| |||||| ||| ||||||||||||||  |||||| | ||  |||||||||||||||||    
T  36860561 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacattttttatactatagtgttaacttcac 36860462  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     |||||| |||||  | | ||||||||||| ||||||||||    
T  36860461 cagaaaaatcattttcgtgacttcaccatagaattttcctt 36860421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12910499 - 12910348
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacag-----acaatggggtgttactcaatacatttatgatgttatagt 95  Q
    ||||| |||||||| || |||||||||||||||||||||||||||||| ||||| |     ||| ||||||||||| || || |||| ||||||||||||    
T  12910499 ttaatctgatgaattgacgatactatgaggactgaacttttgatgtcactgtactgtacaaacagtggggtgttacgcactatatttttgatgttatagt 12910400  T
Q  96 gttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     |||||||||| | ||||||||||  ||| ||||||||||| ||||||||||    
T  12910399 tttaacttcaccaaaaaagtcattttcatgacttcaccatagaattttcctt 12910348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 32563293 - 32563150
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| || | |||||||||||||||||||| |||||||||| ||| ||||||||||  ||| || |||||||||||||||||    
T  32563293 ttaatctgatgaattgatgatattaaggggactgaacttttgatgtcactgtacagacagtggagtgttactcacaacacttttgatgttatagtgttaa 32563194  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||  |||||| |||||   || ||||||||||| |||||||    
T  32563193 cttcatcagaaaaatcattttaatgacttcaccatagaattttc 32563150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 5837699 - 5837557
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||  ||||||| ||||||||||| |||||| ||| ||||||||||||||  ||| || ||||| ||||||||||     
T  5837699 ttaatatgatgaattgatgatactatggagactgaaattttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgctatagtgttac 5837600  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| ||||||||||||| ||| | |||||| || ||||||    
T  5837599 cttcaccagaaaagtcattctcatgaattcaccgtagaatttt 5837557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 25500957 - 25501099
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||  ||||| ||||||||||| ||||||||| ||| || ||||||| |||  ||| || ||||| |||||||||||    
T  25500957 ttaatctgatgaattgatgatactatagggacttaacttttgatggcagtgtacaaacagtgaggtgttattcacaacacttttgatgctatagtgttaa 25501056  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    ||| || ||||||||||||| ||| ||||||||||| ||||||    
T  25501057 ctttaccagaaaagtcattctcatgacttcaccatagaatttt 25501099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 14409358 - 14409501
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||| ||  |||   | | ||||||| |||||| ||||||| ||||||||||||||| |    
T  14409358 ttaatctgatgaattgatgatactatgag-actgaacttttgatgccaccgtattaagagtggggtgctactcactacatttttgatgttatagtgttga 14409456  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| |||||| |||||| ||| ||||||||||| ||||||||    
T  14409457 cttcaccagaaaaatcattctcatgacttcaccatagaattttcc 14409501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 22019776 - 22019632
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||  |||||||||| | ||||| |||||||||||||| | |||| ||||||||||||||||||  ||| || ||||  |||||| ||||    
T  22019776 ttaatatgatgaagtgatgatactaaggggacttaacttttgatgtcactatacaaacaatggggtgttactcacaacacttttgattctatagttttaa 22019677  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| |||||||||||||  |||||||||||||| || |||||    
T  22019676 cttcaccagaaaagtcattctaataacttcaccatagaaatttcc 22019632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 144
Target Start/End: Original strand, 31705643 - 31705785
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| |||||||| ||||||||||||| |||||| ||  | |||||||||||  ||||||| |||||||||||||||||    
T  31705643 ttaatctgatgaattgatgatacta-gaggactggacttttgatgtcattgtacaaacggtagggtgttactcgttacatttttgatgttatagtgttaa 31705741  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| | |||| |||||   || ||||||||||| |||||||    
T  31705742 cttcaccaaaaaaatcatttttatgacttcaccatagaattttc 31705785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 36866900 - 36866762
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| | |||||||||  ||||||||||||||||| || |||||| ||| ||||||||||||||  | |||| |||| ||||||||||||||||||    
T  36866900 tgatgaattgttgatactatcgggactgaacttttgatgccattgtacaaacagtggggtgttactcacaatatttttgatattatagtgttaacttcac 36866801  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     |||||| |||||  | | ||||||||||| ||||||||    
T  36866800 cagaaaaatcattttcgtgacttcaccatagaattttcc 36866762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 31786677 - 31786821
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||| || |||||| ||| |||||   | |||| ||||||| | ||| |||||||||||    
T  31786677 ttaatctgatgaattgatgatactatgaggattgaacttttgatgccactgtacaaacagtggggcagtgctcactacatttttcatgctatagtgttaa 31786776  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||| ||  ||||||| ||| ||||||||    
T  31786777 cttcaccaaaaaagtcattctcactacttcactatagaattttcc 31786821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8466888 - 8466743
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| |||||||||||| ||| ||||||||||||  || |||||| | |  ||||||||| |||  ||| || |||||||| ||||||||    
T  8466888 ttaatttgatgaattgatgatactatggggattgaacttttgataccactgtacaaagag-ggggtgttattcacaacacttttgatgttacagtgttaa 8466790  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| ||||||||||||| ||| || ||| |||| ||||||||||    
T  8466789 cttcaccagaaaagtcattctcatgacctcatcatagaattttcctt 8466743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 23116253 - 23116397
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||   ||||||||||||||  || |||||| ||| ||||||| |||||| |||| || |||||||||| ||||||    
T  23116253 ttaatctgatgaattgatgatactatgtaaactgaacttttgattccactgtacaaacagtggggtgctactcactacagttttgatgttataatgttaa 23116352  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  | ||||||||||  ||| || |||||||| ||||||||    
T  23116353 cttcataaaaaaagtcattttcatgacgtcaccatagaattttcc 23116397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 35511508 - 35511652
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| | ||||| ||||| ||||||||||||||||||| | |||| ||| ||| |||||||||| |||| |  |||||||||| ||||||    
T  35511508 ttaatctgatgaattggtgatagtatgatgactgaacttttgatgtcactttacaaacagtggagtgttactcactacagtgttgatgttataatgttaa 35511607  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  ||||| ||||||  ||| |||||||||||  |||||||    
T  35511608 cttcatcagaaacgtcattttcatgacttcaccataggattttcc 35511652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 48 - 147
Target Start/End: Original strand, 13956423 - 13956522
Alignment:
Q  48 agtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||| ||| || ||||||||||| |||| || |||||||||||||||||||||| |||||||||||||  ||| |||||||| || ||||||||||    
T  13956423 agtgtacaaacagtgaggtgttactcactacagttttgatgttatagtgttaacttcatgagaaaagtcattttcatgacttcaccgtagaattttcctt 13956522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 115
Target Start/End: Complemental strand, 22255326 - 22255211
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaataca-tttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||||||| |||||| ||||||||||||||| || |||||| ||  |||||||||||||| |||| ||| |||||||||| |||||    
T  22255326 ttaatctgatgaattgatgataatatgagaactgaacttttgatgccattgtacaaacggtggggtgttactcattacattttttgatgttataatgtta 22255227  T
Q  100 acttcacgagaaaagt 115  Q
    ||||||| | ||||||    
T  22255226 acttcaccaaaaaagt 22255211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 7 - 137
Target Start/End: Original strand, 43308689 - 43308819
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||| | |||||||||||||||||||||||||||||| || |||||  ||| | |||||||| ||| ||||||| |||||||||| ||||||||| ||    
T  43308689 tgatgagttgatgatactatgaggactgaacttttgatgccattgtacgaacagt-gggtgttattcattacatttttgatgttataatgttaactttac 43308787  T
Q  107 -gagaaaagtcattcgcataacttcaccataa 137  Q
      | ||||||||||| ||| ||||||||||||    
T  43308788 taaaaaaagtcattctcatgacttcaccataa 43308819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 40133523 - 40133385
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| | ||||| |||| ||||||||||||||||| || |||||| | | ||||||||||||||  |||||| ||||  |||| ||||||||||||    
T  40133523 tgatgaattgttgatattatggggactgaacttttgatgccattgtacaaatagtggggtgttactcacaacatttttgatactataatgttaacttcac 40133424  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     | ||||||||||  | | ||||||||||| ||||||||    
T  40133423 cacaaaagtcattttcgtgacttcaccatagaattttcc 40133385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 133
Target Start/End: Complemental strand, 33908362 - 33908245
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||||||||||||||||||||||| ||  ||||| ||| ||| ||| |||||| |||| || ||||| ||||||||| ||||||| |||||  |    
T  33908362 gatgatactatgaggactgaacttttgatgccaccgtacaaacagtggagtgctactcactacacttttgatgatatagtgttgacttcaccagaaagtt 33908263  T
Q  116 cattcgcataacttcacc 133  Q
    ||||| ||| ||||||||    
T  33908262 cattctcatgacttcacc 33908245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 8437095 - 8436979
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||  |||||||||||||||||||||||| |||||| |||||||| ||||||||| |||| ||  || | ||||||||||| ||||| | |||| |    
T  8437095 gatgatataatgaggactgaacttttgatgtcactgtacaaacaatgggatgttactcactacactttggaagctatagtgttaatttcaccaaaaaaat 8436996  T
Q  116 cattcgcataacttcac 132  Q
    ||||| ||| |||||||    
T  8436995 cattctcatgacttcac 8436979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 11898139 - 11898004
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    ||||||| |||||||||||||||||| |||||||||||||| ||||||   | | |||||||||||| | || || ||||| |||| | ||||||| ||     
T  11898139 gatgaattgatgatactatgaggactaaacttttgatgtcactgtacaactagtagggtgttactcagtgcacttttgatgctataatattaactttacc 11898040  T
Q  108 agaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||||| |||  ||| |||||||| |||||||||    
T  11898039 agaaaagttattatcatgacttcaccctaaaatttt 11898004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 17158062 - 17158166
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  |||||||||| | ||| ||||||||||||||| |||||| ||  ||| |||||||||| ||||||| | |||||||||||||||    
T  17158062 ttaatctgatgaattaatgatactataatgac-gaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaa 17158160  T
Q  101 cttcac 106  Q
    ||||||    
T  17158161 cttcac 17158166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 7208895 - 7208999
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| |||||||||||||||||||||| |||||| ||  | |||||||||||  | ||||| | |||||| | ||||||    
T  7208895 ttaatctgatgaattgatgatacta-gaggactgaacttttgatgtcaatgtacaaacggtagggtgttactcgttgcattttttatgttacaatgttaa 7208993  T
Q  101 cttcac 106  Q
    ||||||    
T  7208994 cttcac 7208999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 15992571 - 15992636
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggt 66  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||| ||| ||||||    
T  15992571 ttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtacaaacagtggggt 15992636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 25668785 - 25668689
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||| |||||||||| | ||||||||||||||||| || ||| || ||| ||||||||||||||  ||| || |||||||| ||||||||||||||    
T  25668785 atgaattgatgatactaaggggactgaacttttgatgccactgttcaaacagtggggtgttactcacaacacttttgatgtta-agtgttaacttcac 25668689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 61 - 145
Target Start/End: Original strand, 26317775 - 26317859
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||||||  || |||| ||||||||||||||||||||||| | ||||||||||  ||| |||||| |||| ||||||||    
T  26317775 tggggtgttactcgttatatttttgatgttatagtgttaacttcaccaaaaaagtcattttcatgacttcatcatagaattttcc 26317859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 5830030 - 5829955
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgtta 91  Q
    |||||||||||||||||| |||||||||||||| |||||| ||  | |||||||||||| ||||||| | ||||||    
T  5830030 gatgatactatgaggactaaacttttgatgtcattgtacaaacggtagggtgttactcattacattttttatgtta 5829955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 7 - 74
Target Start/End: Original strand, 21088803 - 21088870
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactca 74  Q
    |||||||| | |||||||||| |||||||||||||||||||| |||||| ||| |||||||| |||||    
T  21088803 tgatgaattgttgatactatggggactgaacttttgatgtcattgtacaaacagtggggtgtcactca 21088870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 68 - 145
Target Start/End: Original strand, 16004474 - 16004552
Alignment:
Q  68 ttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtc-attcgcataacttcaccataaaattttcc 145  Q
    |||||||  |||||| ||||||||||||||||||||||| ||||||||| |||| ||| |||| |||||| ||||||||    
T  16004474 ttactcacaacatttttgatgttatagtgttaacttcaccagaaaagtcaattctcatgactttaccatagaattttcc 16004552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 60 - 105
Target Start/End: Complemental strand, 22255660 - 22255615
Alignment:
Q  60 atggggtgttactcaatacatttatgatgttatagtgttaacttca 105  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  22255660 atggggtgttactcattacatttttgatgttatagtgttaacttca 22255615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 91 - 142
Target Start/End: Complemental strand, 13380549 - 13380498
Alignment:
Q  91 atagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattt 142  Q
    |||| ||||||||||| ||||||||||||| ||| |||||||||||||||||    
T  13380549 atagggttaacttcactagaaaagtcattctcatgacttcaccataaaattt 13380498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 36055874 - 36055923
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||||||| ||||||||||||| ||| || ||||||||||||||||||    
T  36055874 ttaacttcacaagaaaagtcattctcatgacatcaccataaaattttcct 36055923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 6824510 - 6824585
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaac--ttttgatgtcagtgtacagacaatggggtgttactca 74  Q
    ||||| |||| ||| ||||||||||||| ||||||||  ||||||||||| |||||| ||| ||| ||||||||||    
T  6824510 ttaatctgataaattgatgatactatgaagactgaacacttttgatgtcactgtacaaacagtggagtgttactca 6824585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 64 - 152
Target Start/End: Complemental strand, 35933983 - 35933895
Alignment:
Q  64 ggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttttata 152  Q
    |||||||||||  ||| || ||||  ||||||||||||||||  | |||| |||||| ||| ||||||||||| ||||||||| |||||    
T  35933983 ggtgttactcacaacacttttgattctatagtgttaacttcatcaaaaaaatcattctcatgacttcaccatacaattttcctattata 35933895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 148
Target Start/End: Complemental strand, 22616542 - 22616491
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||||||| ||||||||||||  ||| ||||||||||| |||||||||||    
T  22616542 ttaacttcaccagaaaagtcattttcatgacttcaccatagaattttccttt 22616491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 28416558 - 28416663
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| || |  || ||||||||||||  || |||||| ||| |||| |||||||||  | | || |||| ||||||||||||    
T  28416558 ttaatctgatgaattgatgatattaaggagattgaacttttgattccactgtacaaacagtgggatgttactcacaatacttttgatattatagtgttaa 28416657  T
Q  101 cttcac 106  Q
    ||||||    
T  28416658 cttcac 28416663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 35504509 - 35504428
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacattt 82  Q
    ||||| |||||||| ||||||||||| | || ||||||||||||||||   |||| ||  || ||||||||||| |||||||    
T  35504509 ttaatatgatgaattgatgatactataatgattgaacttttgatgtcatcatacaaacggtgaggtgttactcattacattt 35504428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 38 - 103
Target Start/End: Complemental strand, 42342840 - 42342775
Alignment:
Q  38 ttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaactt 103  Q
    ||||||||||| |||| | ||| |||||| |||||||  |||||| |||||||||||| |||||||    
T  42342840 ttttgatgtcactgtataaacagtggggtattactcacaacatttttgatgttatagtattaactt 42342775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 82; Significance: 1e-38; HSPs: 19)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 8513377 - 8513232
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||  ||| || |||| ||||||||||||    
T  8513377 ttaatatgatgaattgatgatattatggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatattatagtgttaa 8513278  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| ||||||||||||| ||| ||||||||||| |||||||||    
T  8513277 cttcaccagaaaagtcattctcatgacttcaccatagaattttcct 8513232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 9 - 149
Target Start/End: Original strand, 4318871 - 4319011
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||||| ||  |||||||||||||||| |||||| ||| ||||||||||||||  ||| || ||||||||||||||||||||||| |    
T  4318871 atgaattgatgatactatgggggttgaacttttgatgtcactgtacaaacagtggggtgttactcataacacttttgatgttatagtgttaacttcacca 4318970  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
     ||||||||||| ||| ||||||||||| ||||||||||||    
T  4318971 aaaaagtcattctcatgacttcaccatagaattttcctttt 4319011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 1945978 - 1945831
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||| |||||||||  |||||||||||||| ||||||||||||||||| | |||| ||| |||||||||||||| ||||||| |||||||||||||||||    
T  1945978 ttaacttgatgaattcatgatactatgagggctgaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaa 1945879  T
Q  101 cttca-cgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||||| | | |||||||||||  || |||||||| || ||||||||||    
T  1945878 cttcaccaaaaaaagtcattcttatgacttcaccgtagaattttcctt 1945831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7235075 - 7235218
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| |||||||||| ||||||||||||||| ||  ||||| ||| ||||||| |||||| |||| || ||||||||||||||| |    
T  7235075 ttaatctgatgaattgataatactatgag-actgaacttttgatggcaccgtacaaacagtggggtgctactcactacacttttgatgttatagtgttga 7235173  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||  |||||||||||| ||||||||||||||| ||||||||    
T  7235174 cttcaccggaaaagtcattctcataacttcaccatagaattttcc 7235218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 15491759 - 15491631
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||| |||||||||||||| || |||||| | | ||||||||||||||  ||| || |||||||| | ||||||    
T  15491759 ttaatctgatgaattgatgatactatgagggctgaacttttgatgccactgtacaaatagtggggtgttactcacaacacttttgatgttacaatgttaa 15491660  T
Q  101 cttcacgagaaaagtcattcgcataactt 129  Q
    |||||||||||||||||||| ||||||||    
T  15491659 cttcacgagaaaagtcattctcataactt 15491631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 5627529 - 5627389
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| | |||| | | |||||||||||||| || |||| | |||||||||||||||||||||    
T  5627529 tgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattatattttttatgttatagtgttaacttcac 5627430  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     | |||||||||||  || |||||||| || ||||||||||    
T  5627429 caaaaaagtcattcttatgacttcaccttagaattttcctt 5627389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 3879985 - 3880124
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||||||||| ||| |||||||||||||||| |||||| ||| | ||||||||||||  ||| || ||||  |||| ||||||||||||    
T  3879985 tgatgaattgatgatactatggggattgaacttttgatgtcattgtacaaacagtagggtgttactcacaacacttttgatactataatgttaacttcac 3880084  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     ||||||||||||| | | ||||||||||| |||||||||    
T  3880085 cagaaaagtcattctcgtgacttcaccatagaattttcct 3880124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 7055261 - 7055400
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||||| ||||||||||||||||| | |||| | | || ||||||||| | || |||| | |||||||||||||||||||||    
T  7055261 tgatgaattgatgatactatgagggctgaacttttgatgtcattctacaaatagtgaggtgttactaattatattttttatgttatagtgttaacttcac 7055360  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     | |||| ||||||  || |||||||||||||||||||||    
T  7055361 caaaaaaatcattcttatgacttcaccataaaattttcct 7055400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 6089052 - 6088910
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||  |||||||||||||||| || | |||| ||| ||||| ||||||||  ||| || ||||  |||||||||||    
T  6089052 ttaatctgatgaattgatgatactatggtgactgaacttttgatgccactttacaaacagtggggcgttactcacaacacttttgatactatagtgttaa 6088953  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| |||||| |||||| ||| ||||||||||| ||||||    
T  6088952 cttcaccagaaaaatcattctcatgacttcaccatagaatttt 6088910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 29182307 - 29182165
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||  |||||||||||||||| || |||| | ||| ||||||||||||||  ||| || |||||||||||||||||    
T  29182307 ttaatctgatgaattgatgataatatggagactgaacttttgatgacactgtataaacagtggggtgttactcacaacacttttgatgttatagtgttaa 29182208  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||  |  ||| |||||| ||| ||||||||||||||||||    
T  29182207 cttcatcaataaaatcattctcatgacttcaccataaaatttt 29182165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 20768228 - 20768087
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||| || |  ||| |||||||  || |||||| |||| || ||||| ||||||||| |    
T  20768228 ttaatctgatgaattaatgatactatgaggactgaacttttgatgccacta-acaaacaatgga-tgctactcactacacttttgatgctatagtgttga 20768131  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| ||||||||||||| ||| ||||||||||| |||||||    
T  20768130 cttcaccagaaaagtcattctcatgacttcaccatagaattttc 20768087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 149
Target Start/End: Complemental strand, 18498563 - 18498429
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatgggg-tgttactcaatacatttatgatgttatagtgttaacttcacgagaaaag 114  Q
    |||||||||||||||||||||||||||||| || |||||| ||  ||||| |||| |||| |||| || ||||| |||| |||||||||||| || ||||    
T  18498563 gatgatactatgaggactgaacttttgatgccactgtacaaactgtgggggtgttgctcactacacttttgatgctataatgttaacttcaccaggaaag 18498464  T
Q  115 tcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| ||| ||||||| ||| | ||||||||||    
T  18498463 tcattctcatgacttcactatagatttttcctttt 18498429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 33618978 - 33618834
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||| ||  ||||| | |||||| || |||||| |||| || |||||  |||||||| |    
T  33618978 ttaatctgatgaattgatgatactatgagaactgaacttttgatgccaccgtacaaataatgggttgctactcactacacttttgatgcgatagtgttga 33618879  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| ||||||||  ||| ||| |||||||| || ||||||||    
T  33618878 cttcaccagaaaagtatttcccatgacttcaccgtagaattttcc 33618834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 21017158 - 21017270
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||||||||| ||||||||||||||||| || |||||| | ||||||||||||||||  |||||| | ||  || | ||||||||||||    
T  21017158 tgatgaattgatgatactatggggactgaacttttgatgccattgtacaaataatggggtgttactcacaacattttttatactacaatgttaacttcac 21017257  T
Q  107 gagaaaagtcatt 119  Q
     | ||||||||||    
T  21017258 caaaaaagtcatt 21017270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 30353404 - 30353540
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||  ||||||||| | |||| || |||||| ||| || | | ||||||   ||| || |||||||||| ||||||||||||    
T  30353404 tgatgaattgatgatactatggagactgaactatcgatgccactgtacaaacagtgagatattactcgcaacacttttgatgttataatgttaacttcac 30353503  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     ||||||||||||| ||| ||||||||||| ||||||    
T  30353504 cagaaaagtcattctcatgacttcaccatagaatttt 30353540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 33893043 - 33893186
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | ||||||||||||| || ||| |||||| | | ||||||||||||||  ||| || |||||||||||||||||    
T  33893043 ttaatctgatgaattgatgatactaag-ggactgaacttttaatatcattgtacaaatagtggggtgttactcacaacacttttgatgttatagtgttaa 33893141  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| | ||||  || |||| |||||| ||||||||    
T  33893142 cttcactaaaaaaattattctaatgactttaccatagaattttcc 33893186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 6091231 - 6091313
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgtta 91  Q
    |||||| |||||||||| ||| ||||||||||||||| || |||||| ||||||| |||||||||| ||||||| | ||||||    
T  6091231 atgaattgatgatactacgagtactgaacttttgatggcattgtacaaacaatggtgtgttactcactacattttttatgtta 6091313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Complemental strand, 19631797 - 19631741
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttttatat 153  Q
    |||||||||| |||||||||||||  || ||||||||||| |||||||||| |||||    
T  19631797 ttaacttcaccagaaaagtcattcttatgacttcaccatagaattttccttgtatat 19631741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 11084152 - 11084208
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttttatat 153  Q
    ||||||| || |||||||| |||  ||| ||||||||||| ||||||||||||||||    
T  11084152 ttaactttaccagaaaagttattttcatgacttcaccatagaattttccttttatat 11084208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 82; Significance: 1e-38; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 40552300 - 40552445
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||| ||  ||| |||||||||| ||||||| |||||||||||||||||    
T  40552300 ttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggagtgttactcattacatttttgatgttatagtgttaa 40552399  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||| | | ||||||||||| ||| ||||||||||| |||||||||    
T  40552400 cttctccaaaaaagtcattctcatgacttcaccatagaattttcct 40552445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 35844461 - 35844314
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||| |||||||||||||| |||||| ||| || |||||||||||  |||||| || ||||||||||||||    
T  35844461 ttaatctgatgaattgatgatactatggggactaaacttttgatgtcactgtacaaacagtgaggtgttactcacaacatttttgttgttatagtgttaa 35844362  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||| ||||||||||||  ||| ||||||||||| |||||||||||    
T  35844361 cttcaccagaaaagtcattatcatgacttcaccatagaattttccttt 35844314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 47481651 - 47481509
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||||| || |||||||||||||| | |||| ||| |||||||||||||| ||||||| |||||||||||||||||||||||    
T  47481651 tgatgaattgatgatactatgagggctaaacttttgatgtcattctacaaacagtggggtgttactcattacatttttgatgttatagtgttaacttcac 47481552  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
     | |||  ||||||  || ||||||||||||||||||||||||    
T  47481551 caaaaacatcattcctatgacttcaccataaaattttcctttt 47481509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 48355076 - 48354930
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | |||||||||||||| ||||||||||||||| || |||||| |||||||||||||||||| ||||||| | || ||||||||||||    
T  48355076 ttaatctgatgagttgatgatactatgagaactgaacttttgatgccattgtacaaacaatggggtgttactcattacatttttaatattatagtgttaa 48354977  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | |||| |||||| ||| ||||||||||| ||||||||||    
T  48354976 cttcaccataaaaatcattctcatgacttcaccatagaattttcctt 48354930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 3655243 - 3655388
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||  |||||||||||||| ||||||| | |||||||||||||||    
T  3655243 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcattacattttttatgttatagtgttaa 3655342  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||| |  | ||||||||||   || |||||||||||||||||||||    
T  3655343 ctttatcaaaaaagtcatttttatgacttcaccataaaattttcct 3655388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 4015595 - 4015451
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| | |||| ||| | ||||||||||||  ||| || ||||| |||||||||||    
T  4015595 ttaatatgatgaattgatgatactatgaggactgaacttttgatgtcactctacaaacagttgggtgttactcacaacacttttgatgctatagtgttaa 4015496  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||  ||||||||||||| ||| ||||||||||| ||||||||    
T  4015495 cttcatcagaaaagtcattctcatgacttcaccatagaattttcc 4015451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 20373337 - 20373481
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| |||||||| ||||| |||||||||||||||||| |||||| ||| |||||||||||||  ||||||| |||||||||||| ||||    
T  20373337 ttaatttgatgaattgatgataccatgagaactgaacttttgatgtcattgtacaaacagtggggtgttactcgttacatttttgatgttatagtattaa 20373436  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| ||||||  || ||||||| ||||||||||||    
T  20373437 cttcaccaaaaaaatcattcttatgacttcactataaaattttcc 20373481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 7327530 - 7327669
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtg-ttaacttcac 106  Q
    ||||||| |||||||||||| |||||||||||||||||||| |||||| | ||||| ||||||||||  ||| || ||||||||||||| ||||||||||    
T  7327530 gatgaattgatgatactatggggactgaacttttgatgtcactgtacaaataatggagtgttactcacaacacttttgatgttatagtgtttaacttcac 7327629  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     | ||||||||||| ||||||||||||||| |||||||||    
T  7327630 taaaaaagtcattctcataacttcaccatagaattttcct 7327669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 51213022 - 51213166
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | |||||||||||||||||| ||||||||||| || |||||| ||| ||||||||| |||| ||||||| | |||||| ||||||||    
T  51213022 ttaatctgatgagttgatgatactatgaggactcaacttttgatgccattgtacaaacagtggggtgttgctcattacattttttatgttacagtgttaa 51213121  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||||    
T  51213122 cttcaccaaaaaagtcattctcatgacttcaccatagaattttcc 51213166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 29099490 - 29099356
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | |||||||||||| ||||||| |||||| ||| ||||||||||||||  |||||| | |||||||||||||||    
T  29099490 ttaatatgatgaattgatgatactaaggggactgaactttagatgtcactgtacaaacagtggggtgttactcacgacattttttatgttatagtgttaa 29099391  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccat 135  Q
    |||||| |||||||||||||  || ||||||||||    
T  29099390 cttcaccagaaaagtcattctaatgacttcaccat 29099356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 69; E-Value: 8e-31
Query Start/End: Original strand, 9 - 145
Target Start/End: Complemental strand, 37203194 - 37203058
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||||||||||||||||||||||| || |||||| ||| |||||||||||||| |||| || ||||||||||||||||||||||  |    
T  37203194 atgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttatagtgttaacttcatca 37203095  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     |||| |||||   || ||||||||||| ||||||||    
T  37203094 aaaaaatcatttttatgacttcaccatagaattttcc 37203058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 40936126 - 40935995
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||| | |||||| ||||||||||   ||| || ||||| |||||||||||    
T  40936126 ttaatctgatgaatagatgatactatgaggactgaacttttgatgtcactgtataaacaatgaggtgttactcgcaacacttttgatgctatagtgttaa 40936027  T
Q  101 cttcacgagaaaagtcattcgcataacttcac 132  Q
    |||||| |||||| |||||| ||| |||||||    
T  40936026 cttcaccagaaaaatcattctcatgacttcac 40935995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 9 - 143
Target Start/End: Original strand, 46297811 - 46297945
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| |||||||||| | ||||||||||||||| | || |||||| ||| ||| |||||||||| || |||| ||||||||||||||||||||||| |    
T  46297811 atgaattgatgatactacggggactgaacttttgacgccattgtacaaacagtggtgtgttactcactatatttttgatgttatagtgttaacttcacca 46297910  T
Q  109 gaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||||||||  ||| ||||||||||| ||||||    
T  46297911 gaaaagtcattttcatgacttcaccatagaatttt 46297945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11466959 - 11466814
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||| ||||||||||| || |||||| ||| ||||||||||||||  ||| ||  ||||||||||| ||||    
T  11466959 ttaatctgatgaattgatgatactatggggactaaacttttgatgccactgtacaaacagtggggtgttactcacaacacttgcgatgttatagtcttaa 11466860  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||  ||||||||||||| ||  ||||||||||| |||||||||    
T  11466859 cttcatcagaaaagtcattctcaagacttcaccatagaattttcct 11466814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 26941301 - 26941446
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||| |||||||||||||||||||||||| | |||| ||| |||||||||||||| || | || |||| ||||||||||||    
T  26941301 ttaatctgatgaattaatgataccatgaggactgaacttttgatgtcattatacaaacagtggggtgttactcattataattttgattttatagtgttaa 26941400  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | |||| ||||||  || ||||||||||| |||||||||    
T  26941401 cttcaccaaaaaaatcattcttatgacttcaccatagaattttcct 26941446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 22451103 - 22450957
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||| ||   |||| ||| || |||| |||||| |||| || ||||| ||||||||| |    
T  22451103 ttaatatgatgaattgatgatactatggggactgaacttttgatgccaccatacaaacagtgaggtgctactcactacacttttgatgctatagtgttga 22451004  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| |||||| |||||| ||| ||||||||||| ||||||||||    
T  22451003 cttcaccagaaaaatcattctcatgacttcaccatagaattttcctt 22450957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 42506116 - 42506214
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |||||| ||||||| |||| || ||||||||||||||||    
T  42506116 ttaatctgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtggggtattactcattacaattttgatgttatagtgtta 42506214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 52040963 - 52041109
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaat-ggggtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||||||||||||| |||||||||||||||| || | |||| ||| | |||| |||||||| |||| || |||||||||||| |||    
T  52040963 ttaatctgatgaattgatgatactatgatgactgaacttttgatgccactatacaaacatttggggagttactcactacacttttgatgttatagtatta 52041062  T
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||||||| ||||||||||||| ||| ||||||||  | |||||||||    
T  52041063 acttcaccagaaaagtcattctcatgacttcacctcagaattttcct 52041109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 7 - 147
Target Start/End: Original strand, 21009849 - 21009992
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||| ||||||| ||||||||||||||||| | |||| | | |||||||||||||| ||||||| |||||||||||||| || |||||    
T  21009849 tgatgaattgatgataatatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcattacatttttgatgttatagtgtcaaattcac 21009948  T
Q  107 ---gagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
        | |||| ||||||  |||||||||||||||||||||||||    
T  21009949 aaaaaaaaaaatcattcttataacttcaccataaaattttcctt 21009992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 37157827 - 37157699
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||||||||| |||||||||||||||| || |||||| ||| |||||||||||||| |||| || ||||||||||||||||||||||  | |||||     
T  37157827 gatgatactatgatgactgaacttttgatgccactgtaca-acagtggggtgttactcactacaattttgatgttatagtgttaacttcatcaaaaaagc 37157729  T
Q  116 cattcgcataacttcaccataaaattttcc 145  Q
    ||||  ||| ||||||||||| ||||||||    
T  37157728 cattttcatgacttcaccatagaattttcc 37157699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 44186542 - 44186687
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||| |||| | |||  |||||||||||||  ||| || ||||| |||||||||||    
T  44186542 ttaatttgatgaattgatgatactatggggactgaacttttgatgtcactgtataaacagcggggtgttactcacaacacttttgatgctatagtgttaa 44186641  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | |||| |||||| |   |||||| |||| |||||||||    
T  44186642 cttcaccaaaaaaatcattctctcgacttcatcatagaattttcct 44186687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 45174640 - 45174494
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaat--acatttatgatgttatagtgtt 98  Q
    ||||| |||||||| |||||||||||| |||||||||||||||||  | |||||| ||| ||  ||||||||||    ||| || |||||||||||||||    
T  45174640 ttaatctgatgaattgatgatactatggggactgaacttttgatgctactgtacaaacagtgaagtgttactcacacaacacttttgatgttatagtgtt 45174541  T
Q  99 aacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||| | |||||| |||| || |||||||||||||||||||||    
T  45174540 aacttcaccaaaaaagttattctcacaacttcaccataaaattttcc 45174494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 4761705 - 4761838
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac--gagaaaa 113  Q
    ||||||||||||||||||||||||||||||||| |||||| ||| ||  |||||||||| ||||||| |||| ||||||| ||||||||||   | ||||    
T  4761705 gatgatactatgaggactgaacttttgatgtcattgtacaaacagtgaagtgttactcattacatttttgatattatagtattaacttcaccaaaaaaaa 4761804  T
Q  114 gtcattcgcataacttcaccataaaattttcctt 147  Q
    |||| || ||| | ||||||||| ||||||||||    
T  4761805 gtcaatctcatgaattcaccatagaattttcctt 4761838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 11357405 - 11357535
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatgggg-tgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||  | |||||| ||| ||||| ||||||||| || | || ||||| ||||||||||    
T  11357405 ttaatctgatgaattgatgatactatgatgactgaacttttgatgcaactgtacaaacagtgggggtgttactcactatacttttgatgctatagtgtta 11357504  T
Q  100 acttcacgagaaaagtcattcgcataacttc 130  Q
    ||||||| ||||||||||||| ||| |||||    
T  11357505 acttcaccagaaaagtcattctcatgacttc 11357535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21193741 - 21193595
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||| ||| |||||||||||||||||||| | |||| ||| ||||||||||||||  ||| || ||||   | ||||||||    
T  21193741 ttaatctgatgaattaatgataccatggggactgaacttttgatgtcactctacaaacagtggggtgttactcacaacacttttgattcaacagtgttaa 21193642  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| ||||||||||||| ||| |||| |||||| ||||||||||    
T  21193641 cttcaccagaaaagtcattctcatgactttaccatagaattttcctt 21193595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 149
Target Start/End: Complemental strand, 34133064 - 34132922
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||| |||| |||||||||||||||||||| |||||| ||| ||||||||||||||  |||||| ||||  ||||||||||| |||||    
T  34133064 tgatgaattgatgatattatggggactgaacttttgatgtcattgtacaaacagtggggtgttactcacaacatttttgatactatagtgttaatttcac 34132965  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
     | ||||||||||  | | ||||||  ||| ||||||||||||    
T  34132964 caaaaaagtcattttcgtgacttcattatagaattttcctttt 34132922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 39282787 - 39282642
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||||||||||| |||||| ||||||||||||||| || |||| | ||| |||||| |||||| | ||| || |||||||||||||||||    
T  39282787 ttaatctgatgaatggatgataatatgagaactgaacttttgatgccactgtataaacagtggggtattactc-acacagttttgatgttatagtgttaa 39282689  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     || |  |||||| |||||  ||| ||||||||||| ||||||||||    
T  39282688 ttttatcagaaaaatcattttcatgacttcaccatagaattttcctt 39282642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27480420 - 27480564
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||||||  ||||| ||||| || || |||||| || | || ||||||||||||||| |    
T  27480420 ttaatatgatgaattgatgatactatggggactgaacttttgatgtcaccgtacaaacaattggatgctactcattatacttttgatgttatagtgttga 27480519  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||| || | |||  |||||| ||| |||||| |||| ||||||||    
T  27480520 ctttaccaaaaatatcattctcatgacttcatcatagaattttcc 27480564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 54505926 - 54505799
Alignment:
Q  17 atgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtc 116  Q
    |||||||||||||| ||||| ||||||||||| | || | | |||||||||||||||| ||||||| ||||||||||||||||||||||  | |||||||    
T  54505926 atgatactatgagg-ctgaatttttgatgtcattctataaataatggggtgttactcattacatttttgatgttatagtgttaacttcaacaaaaaagtc 54505828  T
Q  117 attcgcataacttcaccataaaattttcc 145  Q
    ||||     |||||| |||||||||||||    
T  54505827 attcttgcgacttcatcataaaattttcc 54505799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 33378826 - 33378971
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| |||||||| ||||||||||||||||||||  ||||| | | ||||||  |||||| |||| || ||||  ||||||||| |    
T  33378826 ttaatctgatgaattgataatactatggggactgaacttttgatgtcaccgtacaaatattggggtactactcactacacttttgatactatagtgttga 33378925  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    ||||||   ||||||||||| ||||||||  ||||| ||||||||||||    
T  33378926 cttcac---aaaagtcattctcataactttgccatagaattttcctttt 33378971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 53229193 - 53229342
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatg-gggtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| ||||||| ||||| ||||||||||||||||  | |||||| ||| || ||||||| |||| |||| || ||||| ||||||||||    
T  53229193 ttaatctgatgaattgatgatattatgatgactgaacttttgatgcaactgtacaaacattgagggtgttgctcactacacttttgatgctatagtgtta 53229292  T
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    | ||||| |||||| | |||  ||| |||||||| ||||||||| |||||    
T  53229293 atttcaccagaaaaataattttcatgacttcaccttaaaatttttctttt 53229342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 24708158 - 24708295
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||||| |||||  ||| || ||||||||||| | || || ||||||||  |||||||    
T  24708158 ttaatctgatgaattgatgatactatgaagactgaacttttgatgtcactgtac--acagtgaggtgttactcactgcagttttgatgtta-cgtgttaa 24708254  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    | |||  | ||||||||||   |||||||||||||||||||||    
T  24708255 catca--aaaaaagtcattttgataacttcaccataaaatttt 24708295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 43975929 - 43976068
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| |||||||| | ||||||||||||||  ||||| | | ||| ||| |||||| |||| || ||||| ||||||||| |    
T  43975929 ttaatctgatgaattgatgatattatgaggattaaacttttgatgtcatcgtacaaatagtggagtgctactcactacacttttgatgctatagtgttga 43976028  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    ||||   | ||||||||||| ||| ||||||||||||||||||    
T  43976029 cttc---aaaaaagtcattctcatgacttcaccataaaatttt 43976068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 7 - 106
Target Start/End: Complemental strand, 3362382 - 3362283
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||||| ||||||| ||||||||||||| || |||||| | | |||| ||||||||| || |||| ||||| |||||||||||||||||    
T  3362382 tgatgaattgatgataccatgaggagtgaacttttgatgccactgtacaaatagtgggatgttactcactatatttctgatgctatagtgttaacttcac 3362283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 16 - 144
Target Start/End: Complemental strand, 25579859 - 25579731
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||| |||| |||||||||||||||||||| |||| | | | | |  ||||| |||  ||| || ||||| |||||| |||||||||| |||||| |    
T  25579859 gatgataatatggggactgaacttttgatgtcactgtataaatagtagaatgttattcacaacacttttgatgctatagtattaacttcaccagaaaaat 25579760  T
Q  116 cattcgcataacttcaccataaaattttc 144  Q
    ||||| |||||||| ||||||||||||||    
T  25579759 cattctcataacttaaccataaaattttc 25579731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 105
Target Start/End: Complemental strand, 2008068 - 2007964
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||| ||||| ||| ||||||||||||| || |||||| ||| ||||||||||||||  ||| || | | | |||||||||||    
T  2008068 ttaatctgatgaattgatgatgctatggggattgaacttttgatgccactgtacaaacagtggggtgttactcacaacacttttaacgctatagtgttaa 2007969  T
Q  101 cttca 105  Q
    |||||    
T  2007968 cttca 2007964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 53176189 - 53176074
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||| | |||||| ||| | ||   ||||| |  |||||| |||||||||  ||||||    
T  53176189 ttaatctgatgaattgatgatactatgaggactgaacttttgatgttattgtacaaacagt-ggacattacttacaacatttttgatgttatgatgttaa 53176091  T
Q  101 cttcacgagaaaagtca 117  Q
    |||||  ||||||||||    
T  53176090 cttcatcagaaaagtca 53176074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 107 - 149
Target Start/End: Complemental strand, 53175752 - 53175710
Alignment:
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  53175752 gagaaaagtcattctcataacttcaccataaaattttcctttt 53175710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 7 - 142
Target Start/End: Original strand, 22446111 - 22446247
Alignment:
Q  7 tgatgaatggatgatactatgaggact-gaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttca 105  Q
    |||||||| |||||||||||||||  | |||||||||||| || |||||| | | |||||||||||||| || |||| ||||| |||| |||||||||||    
T  22446111 tgatgaattgatgatactatgagggtttgaacttttgatgccactgtacaaa-agtggggtgttactcactatatttttgatgatataatgttaacttca 22446209  T
Q  106 -cgagaaaagtcattcgcataacttcaccataaaattt 142  Q
     | | ||||||||||  ||| |||||||| || |||||    
T  22446210 ccaaaaaaagtcattttcatgacttcaccgtagaattt 22446247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 119
Target Start/End: Original strand, 24489009 - 24489121
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||| |||| |||||||||||||||||||| ||| || ||| |||  |||||||||  |||||| | ||  |||||| ||||||||||    
T  24489009 tgatgaattgatgataatatggggactgaacttttgatgtcattgtgcaaacagtggaatgttactcacaacatttttaatactatagtcttaacttcac 24489108  T
Q  107 gagaaaagtcatt 119  Q
     | |||| |||||    
T  24489109 aaaaaaaatcatt 24489121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 46994717 - 46994837
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||||||||||||||||||||||||||||| ||||           |||||||||| ||||||| |||||||||||| |||||||||| | |||| |    
T  46994717 gatgatactatgaggactgaacttttgatgtcattgta----------tgtgttactcattacattt-tgatgttatagtattaacttcaccaaaaaaat 46994805  T
Q  116 cattcgcataacttcaccataaaattttcctt 147  Q
    |||||  |  |||||||| || ||||||||||    
T  46994806 cattcttacgacttcaccgtagaattttcctt 46994837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 54828748 - 54828883
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||| |||||| || |||| ||||||||||  |||  | ||  |||||||||||||| ||||||| | |||||||||||||||||| ||    
T  54828748 tgatgaattgatgatgctatgaagaatgaatttttgatgtcgttgtttaaacggtggggtgttactcattacattt-ttatgttatagtgttaactttac 54828846  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     | |||| | |||   || ||||||||||||||||||    
T  54828847 caaaaaaattatttttatgacttcaccataaaatttt 54828883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 33698263 - 33698183
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||||||||  |||||| ||||||||||||||||||||||| ||| |    |||| ||| ||||||||||| ||||||||    
T  33698263 tggggtgttactcacaacatttttgatgttatagtgttaacttcactagaga----attctcatgacttcaccatagaattttcc 33698183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 97 - 147
Target Start/End: Original strand, 40640634 - 40640684
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||||||| ||||||||||||| ||| ||||||||||| ||||||||||    
T  40640634 ttaacttcaccagaaaagtcattctcatgacttcaccatagaattttcctt 40640684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 79 - 148
Target Start/End: Original strand, 55343403 - 55343472
Alignment:
Q  79 atttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||| |||| |||||||||||||||||  ||||||||||||  | | ||||||||||| |||||||||||    
T  55343403 atttttgatattatagtgttaacttcatcagaaaagtcattttcgtgacttcaccatagaattttccttt 55343472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 144
Target Start/End: Complemental strand, 29163895 - 29163839
Alignment:
Q  88 gttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    ||||||||||||||||||| |||||| |||||   || |||||||||||||||||||    
T  29163895 gttatagtgttaacttcaccagaaaaatcattttaatgacttcaccataaaattttc 29163839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 149
Target Start/End: Original strand, 32180747 - 32180799
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||||||| ||||||||||||| |||||||||||| || ||||||| ||||    
T  32180747 ttaacttcactagaaaagtcattctcataacttcaccgtacaattttcatttt 32180799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 61 - 145
Target Start/End: Complemental strand, 44891581 - 44891498
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||| |||||||||  ||| || ||||||||||||||||||||||| | ||||||||||  ||| |||||||| || ||||||||    
T  44891581 tgggatgttactcacaacacttttgatgttatagtgttaacttcacca-aaaagtcattttcatgacttcaccgtataattttcc 44891498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 97 - 143
Target Start/End: Original strand, 53818509 - 53818555
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||||||| |||||| |||||| ||| ||||||||||||||||||    
T  53818509 ttaacttcaccagaaaaatcattctcatgacttcaccataaaatttt 53818555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 91 - 144
Target Start/End: Original strand, 11835737 - 11835790
Alignment:
Q  91 atagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||||||||||||| | |||| |||||| ||| ||||||||||| |||||||    
T  11835737 atagtgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttc 11835790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 29163953 - 29163912
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttg 42  Q
    ||||| |||||||| |||||||||| ||||||||||||||||    
T  29163953 ttaatctgatgaattgatgatactaagaggactgaacttttg 29163912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 61 - 102
Target Start/End: Original strand, 41585408 - 41585449
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaact 102  Q
    |||||||||||||| || |||| |||||||||||||||||||    
T  41585408 tggggtgttactcattatatttttgatgttatagtgttaact 41585449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 4556587 - 4556543
Alignment:
Q  98 taacttcacgagaaaagtcattcgcataacttcaccataaaattt 142  Q
    ||||||||||||||||||||||  ||| ||||||||||| |||||    
T  4556587 taacttcacgagaaaagtcattttcatgacttcaccatagaattt 4556543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 32373605 - 32373460
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||| ||  ||   |||||||||||| || |||||| ||| ||| ||  ||||||  ||| || ||||| |||||||||||    
T  32373605 ttaatatgatgaattgatgataccattggggtggaacttttgatgccactgtacaaacagtggagt--tactcacaacacttttgatgctatagtgttaa 32373508  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||| |   |||||||||||| ||| |||||| |||| ||||| |||||    
T  32373507 ctttattggaaaagtcattctcatgacttcatcatagaatttcccttt 32373460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 6e-38; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 32267159 - 32267027
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    ||||||| |||||||| |||||||||||||||| |||||| ||| |||||||||||||| ||||||| |||||||||| |||||||||||| | ||||||    
T  32267159 gatgataatatgaggagtgaacttttgatgtcattgtacaaacagtggggtgttactcattacatttttgatgttatattgttaacttcacaaaaaaagt 32267060  T
Q  116 cattcgcataacttcaccataaaattttccttt 148  Q
    |||||  || |||||||||||||||||||||||    
T  32267059 cattcttatgacttcaccataaaattttccttt 32267027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 15752169 - 15752027
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| || |||||| ||| || ||||||||||| || |||| | |||||||||||||||    
T  15752169 ttaatctgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtgaggtgttactcactatattttttatgttatagtgttaa 15752070  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | ||||||||||| ||| ||||||||||| ||||||    
T  15752069 cttcaccaaaaaagtcattctcatgacttcaccatagaatttt 15752027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 2959888 - 2959743
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||||||| |||||| ||| |||| ||||||| | |||| || |||||||||||||||||    
T  2959888 ttaatctgatgaattgatgacactatgaggactgaacttttgatgtcactgtacaaacagtgggatgttacttactacagttttgatgttatagtgttaa 2959789  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||  ||||||||||||  ||| ||||||||||| |||||||||    
T  2959788 cttcatcagaaaagtcattttcatgacttcaccatagaattttcct 2959743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 48620777 - 48620629
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| | |||||||||||||||||||| |||||| ||| ||||||||||||||  ||| || |||||||||| ||||||    
T  48620777 ttaatctgatgaattgatgatactaaggggactgaacttttgatgtcactgtacaaacagtggggtgttactcacaacacttttgatgttatattgttaa 48620678  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||| ||||||||||||   ||||||||| |||| ||||||||||||    
T  48620677 cttcacaagaaaagtcattttaataacttcaacatagaattttcctttt 48620629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 1 - 144
Target Start/End: Complemental strand, 10922867 - 10922724
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||| | |||||||||||||||| |||||||||||||||| |||||| ||| |||||| ||||||| ||||||| | |||||||||||||||    
T  10922867 ttaatctgatgagttgatgatactatgaggattgaacttttgatgtcattgtacaaacagtggggtcttactcattacattttttatgttatagtgttaa 10922768  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||| | |||| |||||| ||| | |||||||||||||||||    
T  10922767 cttcaccaaaaaaatcattctcatgatttcaccataaaattttc 10922724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 16 - 150
Target Start/End: Complemental strand, 1547412 - 1547278
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagt 115  Q
    |||||||||||||| ||||||||||||||| || || ||| ||| ||| ||||||||||  |||||| | ||||||||||||||||||||| ||||||||    
T  1547412 gatgatactatgagaactgaacttttgatgccactgcacaaacagtggagtgttactcacaacattttttatgttatagtgttaacttcaccagaaaagt 1547313  T
Q  116 cattcgcataacttcaccataaaattttcctttta 150  Q
    ||||| ||| ||||||||||| |||||||||||||    
T  1547312 cattctcatgacttcaccatagaattttcctttta 1547278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 28564817 - 28564951
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||| |||||| ||| |  ||||||||||| ||||||| |||||||||||||||||    
T  28564817 ttaatatgatgaattgatgatactatgaggactgaacttttgatgtcattgtacaaacagtaaggtgttactcattacatttttgatgttatagtgttaa 28564916  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccat 135  Q
    |||||  | |||| |||||  ||||||||||||||    
T  28564917 cttcatcaaaaaaatcattttcataacttcaccat 28564951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 8 - 149
Target Start/End: Original strand, 11742394 - 11742534
Alignment:
Q  8 gatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    ||||||| ||||||| |||| |||||||||||||||||||| |||||| ||| |||||||||||| |  ||| || ||||  |||||||||||||||||     
T  11742394 gatgaattgatgatattatg-ggactgaacttttgatgtcactgtacaaacagtggggtgttacttacaacacttttgataatatagtgttaacttcacc 11742492  T
Q  108 agaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    ||||||||||||| ||||||||||| ||||||||||||||||    
T  11742493 agaaaagtcattctcataacttcacgataaaattttcctttt 11742534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 18422791 - 18422646
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||||||||||||||||||||||| |||||| ||  |||||||||||||  || |||| |||||||||||||||||    
T  18422791 ttaatctgatgaattgatgatattatgaggactgaacttttgatgtcattgtacaaacggtggggtgttactcgttatatttttgatgttatagtgttaa 18422692  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | ||||||||||   || ||||||||||| |||||||||    
T  18422691 cttcaccaaaaaagtcatttttatgacttcaccatagaattttcct 18422646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 15383073 - 15382927
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||| || |||||||||||||||| || |||||| ||  |||| ||||||||| ||||||| |||||||||||||||||    
T  15383073 ttaatctgatgaattgatgatactacgatgactgaacttttgatgacattgtacaaacggtgggatgttactcattacatttttgatgttatagtgttaa 15382974  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
     ||||| | ||||||||||   |||||||||||||| ||||||||||    
T  15382973 tttcaccaaaaaagtcatttttataacttcaccatagaattttcctt 15382927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 37618928 - 37619080
Alignment:
Q  1 ttaatttgatgaatggatgata--ctatgaggactgaacttttgatgtcagtgtacagacaatggggtgtt--actcaatacatttatgatgttatagtg 96  Q
    ||||| |||||||| |||||||  ||||||| |||||||||||||||||| | |||| ||| |||||||||  ||||| || |||| |||||||||||||    
T  37618928 ttaatctgatgaattgatgatatactatgagaactgaacttttgatgtcattttacaaacagtggggtgttttactcattaaatttttgatgttatagtg 37619027  T
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcctttt 149  Q
    |||||||||| | |||||||||||  |||||||||||||| ||||||||||||    
T  37619028 ttaacttcaccaaaaaagtcattcttataacttcaccatagaattttcctttt 37619080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 30254563 - 30254419
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||| |||||| ||| || | | ||||||| ||||||| |||||||||| ||||||    
T  30254563 ttaatctgatgaattgatgatactttgaggactgaacttttgatgtcattgtacaaacagtgtg-tattactcattacatttttgatgttatattgttaa 30254465  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||  | |||||||||||  |||||||||||||| |||||||||    
T  30254464 cttcaacaaaaaagtcattcttataacttcaccatagaattttcct 30254419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 38823354 - 38823210
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||| ||||||||||||| || |||||| | | |||||||||||||   ||| || ||||| |||||||||||    
T  38823354 ttaatctgatgaattgatgatactatggggattgaacttttgatgacactgtacaaatagtggggtgttactcgcaacaattttgatgctatagtgttaa 38823255  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||| || ||||||||||||| ||| ||||||||||| ||||||||    
T  38823254 cttaaccagaaaagtcattctcatgacttcaccatagaattttcc 38823210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 16415778 - 16415639
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatg-gggtgttactcaatacatttatgatgttatagtgttaacttcacg 107  Q
    |||||| ||||||||||||| | |||||||||||||| || |||||| ||| |  |||||||||||| |||| || ||||| |||||||||||||||||     
T  16415778 atgaattgatgatactatgatggctgaacttttgatgccactgtacaaacatttagggtgttactcactacacttttgatgctatagtgttaacttcacc 16415679  T
Q  108 agaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    ||||||||||||| ||| |||||||| || ||||||||||    
T  16415678 agaaaagtcattctcatgacttcaccttagaattttcctt 16415639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 9903090 - 9903208
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    |||||||||||||| ||||||| |||| ||| |||||||||||||||| |||||| |||  ||||||||||||| |||| || |||||||||||||||||    
T  9903090 ttaatttgatgaattgatgatagtatgtggattgaacttttgatgtcactgtacaaacagcggggtgttactcactacagttttgatgttatagtgttaa 9903189  T
Q  101 cttcacgagaaaagtcatt 119  Q
    |||||  | ||||||||||    
T  9903190 cttcatcaaaaaagtcatt 9903208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 10182044 - 10182189
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| || ||||||||||||||||||||||||||| || |||||| ||| ||| ||||||| || || |||| | |||||| ||| ||||    
T  10182044 ttaatctgatgaattgacgatactatgaggactgaacttttgatgccactgtacaaacagtggcgtgttacgcactatattttttatgttacagttttaa 10182143  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||| | ||||||||||  ||| ||||||||||| |||||||||    
T  10182144 cttcaccaaaaaagtcattttcatgacttcaccatagaattttcct 10182189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 3309287 - 3309144
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| || ||||||||||||  || |||||| ||| |||| |||||||||  ||| || |||||||||||||||||    
T  3309287 ttaatctgatgaattgatgatactatgaagattgaacttttgataccactgtacaaacagtggg-tgttactcacaacacttttgatgttatagtgttaa 3309189  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||| || ||||||||||||| ||| |||| |||||| ||||||||    
T  3309188 ctttaccagaaaagtcattctcatgactttaccatagaattttcc 3309144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 31621589 - 31621733
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| |||||||| |||||||| ||  ||||| | |  |||||| |||||||||||  | ||||||||||||||| |    
T  31621589 ttaatctgatgaattgatgatactatggggactgaatttttgatgccaccgtacaaatagcggggtgctactcaatacacctttgatgttatagtgttga 31621688  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| ||||||||||||| ||| |||||||| || ||||||||    
T  31621689 cttcactagaaaagtcattctcatgacttcaccgtagaattttcc 31621733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 9 - 144
Target Start/End: Complemental strand, 14758173 - 14758038
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| ||||| |||||| ||||||||||||||||| ||  ||||| ||| | | ||| |||||| |||| || ||||||||||||||| ||||||| |    
T  14758173 atgaattgatgaaactatggggactgaacttttgatgccaccgtacaaacagttgtgtgctactcactacacttttgatgttatagtgttgacttcacca 14758074  T
Q  109 gaaaagtcattcgcataacttcaccataaaattttc 144  Q
    |||||||||||| ||| |||||||| ||||||||||    
T  14758073 gaaaagtcattctcatgacttcaccgtaaaattttc 14758038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 7 - 146
Target Start/End: Original strand, 19899811 - 19899950
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||||||||||||  ||||||||||||| || | |||| ||| || ||||||||||  ||||||| |||||||||||||||||||||||    
T  19899811 tgatgaattgatgatactatgagggttgaacttttgatgccattctacaaacagtgaggtgttactcgttacatttttgatgttatagtgttaacttcac 19899910  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     | |||| |||||   || ||||||||||| |||||||||    
T  19899911 caaaaaaatcattattatgacttcaccatagaattttcct 19899950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 34012413 - 34012560
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||| ||||| |||||||||||||||| || | |||| ||| ||| |||||||||| |||| |  |||||||||||||||||    
T  34012413 ttaatctgatgaattgatgatagtatgatgactgaacttttgatgccactttacaaacagtggagtgttactcactacagtgttgatgttatagtgttaa 34012512  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||  | ||| ||||||  ||| ||||||||||| |||||||||||    
T  34012513 cttcatcataaacgtcattttcatgacttcaccatagaattttccttt 34012560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 39393523 - 39393376
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| ||||||||  ||||||||||| ||| | ||||||||||| || |||||| ||||||  || |||||||  ||| || ||||| |||||||||||    
T  39393523 ttaatctgatgaatttatgatactatggggattaaacttttgatgccactgtacaaacaatgaagtattactcacaacacttttgatgctatagtgttaa 39393424  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||  ||||||||||||| |||||||||||| || |||||||||||    
T  39393423 cttcattagaaaagtcattctcataacttcaccgtagaattttccttt 39393376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 51128999 - 51128884
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||| | ||||||||||||||||||| |||||| ||  ||| |||||||||| ||||||| | |||||||||||||||    
T  51128999 ttaatatgatgaattgatgatactataatgactgaacttttgatgtcattgtacaaacggtggagtgttactcattacattttttatgttatagtgttaa 51128900  T
Q  101 cttcacgagaaaagtc 116  Q
    |||||| | |||||||    
T  51128899 cttcactaaaaaagtc 51128884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 7 - 145
Target Start/End: Complemental strand, 23999481 - 23999343
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||| ||||||||||| ||||||||||||||||| | |||| | | |||||||||||||  || |||| | ||||| |||||||||||||||    
T  23999481 tgatgaattgataatactatgagggctgaacttttgatgtcattctacaaatagtggggtgttactcgttatattttttatgttgtagtgttaacttcac 23999382  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     | |||| ||||||  || ||||||||||||||||||||    
T  23999381 caaaaaaatcattcttatgacttcaccataaaattttcc 23999343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 1 - 139
Target Start/End: Complemental strand, 47279329 - 47279191
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||||||||||| |||| || |||||| ||| ||||||||||||||  ||| || ||||  |||| ||||||    
T  47279329 ttaatctgatgaattgatgatactatgaggactgaactttcgatgccactgtacaaacagtggggtgttactcacaacacttttgatagtataatgttaa 47279230  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaa 139  Q
    |||||| | |||| |||||| ||| ||||||||| ||||    
T  47279229 cttcaccaaaaaaatcattctcatgacttcaccaaaaaa 47279191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 9 - 106
Target Start/End: Complemental strand, 32216187 - 32216090
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||| |||||||||| ||||||||||||||||| | || |||||| ||| ||| |||||||||| ||||||| |||||||||||||||||||||||    
T  32216187 atgaattgatgatactacgaggactgaacttttgacgccattgtacaaacagtggtgtgttactcactacatttttgatgttatagtgttaacttcac 32216090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8222268 - 8222125
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||| ||||||||||||||| || ||||   ||  || ||||||||||| ||||||| |||||||||||||||||    
T  8222268 ttaatatgatgaattgatgatactatgagaactgaacttttgatgccattgta---acggtgtggtgttactcattacatttttgatgttatagtgttaa 8222172  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcctt 147  Q
    |||||| | ||| ||||||   || |||||||| || ||||||||||    
T  8222171 cttcactaaaaaggtcatttttatgacttcaccgtagaattttcctt 8222125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 27763353 - 27763487
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||| ||| ||||||||||||||| ||| ||||||||||||| | |||| || ||||| ||||||||| ||||||| |||||||||||||||||||||||    
T  27763353 tgataaattgatgatactatgagggctggacttttgatgtcattctacaaactatggg-tgttactcattacatttttgatgttatagtgttaacttcac 27763451  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     | |||| ||||||  ||||||| |||||||| ||||    
T  27763452 -aaaaaaatcattcttataactttaccataaattttt 27763487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 30326988 - 30327132
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||| ||||||||||||||||  | |||||| ||  | |||| ||||||| ||||||| |||||||||||||||||    
T  30326988 ttaatctgatgaattgatgatactatgatgactgaacttttgatgctattgtacaaacggttgggtattactcattacatttttgatgttatagtgttaa 30327087  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
     ||||| | ||||||||||   || ||||||| ||| ||||||||    
T  30327088 attcacaaaaaaagtcatttttatgacttcactatagaattttcc 30327132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 42721179 - 42721035
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||| |||||||||||||| | |||||| ||| |||||||||||||| || |||| | ||| ||||| | |||    
T  42721179 ttaatctgatgaattgatgatactatggggattgaacttttgatgttactgtacaaacagtggggtgttactcactatattttttatgatatagggctaa 42721080  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| |||||  ||| ||||||||||| ||||||||    
T  42721079 cttcaccaaaaaaatcattttcatgacttcaccatagaattttcc 42721035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 28769792 - 28769651
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||||||| |||| ||||||| || |||||| ||  |||| ||||||||| ||||||| |||||| ||||||||||    
T  28769792 ttaatatgatgaattgatgatactatgaggaccgaacctttgatgccattgtacaaacggtggg-tgttactcattacatttttgatgtcatagtgttaa 28769694  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | |||||| |||   || ||||||||||| ||||||    
T  28769693 cttcacaaaaaaagttatttttatgacttcaccatagaatttt 28769651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 37451425 - 37451308
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||| ||| |||||||||| |||||||||||||||||||||| |||||| ||  | |||||||||| | ||||||| |||||||||||||||||    
T  37451425 ttaatatgataaattgatgatacta-gaggactgaacttttgatgtcattgtacaaacggtagggtgttacttattacatttttgatgttatagtgttaa 37451327  T
Q  101 cttcacgagaaaagtcatt 119  Q
    ||| || | ||||||||||    
T  37451326 ctttaccaaaaaagtcatt 37451308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 41926303 - 41926161
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||  ||||||||||| ||||| || |||||| ||| |||| | ||||||| || |||| |||||||||||| ||||    
T  41926303 ttaatctgatgaattgatgatactatagggactgaacttgtgatgccactgtacaaacagtgggatattactcactatatttttgatgttatagtattaa 41926204  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||  | |||| |||||  ||||||||||||||| ||||||    
T  41926203 cttcatcaaaaaaatcattttcataacttcaccatagaatttt 41926161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 7079099 - 7079254
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagac-----------aatggggtgttactcaatacatttatgatgt 89  Q
    |||||||||||||| ||||||||||||| ||||||||||||||||||| |||||| ||           | ||||||||||||||  ||| || |||| |    
T  7079099 ttaatttgatgaattgatgatactatgatgactgaacttttgatgtcattgtacaaacagtgaggtgttagtggggtgttactcacaacacttttgatat 7079198  T
Q  90 tatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||||||||||| | ||||||||||  ||| |||| |||||||||||||||    
T  7079199 tatagtgttaacttcaccaaaaaagtcattatcatgactttaccataaaattttcc 7079254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 21289812 - 21289661
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacattt-------atgatgttata 93  Q
    ||||| |||||||| |||||||||||  ||||||||||||||||| || |||||| ||| |||||||||||||| |||||||        | ||| ||||    
T  21289812 ttaatctgatgaattgatgatactatagggactgaacttttgatgccactgtacaaacagtggggtgttactcactacattttttattatttatgatata 21289713  T
Q  94 gtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||||||| ||||||||||||| ||| ||||||| ||| | ||||||    
T  21289712 gtgttaacttcaccagaaaagtcattctcatgacttcacaatagatttttcc 21289661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 27533016 - 27533144
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||| ||| ||||||||||||| || |||||| | | |||| |||||| ||  | | || ||||| |||||||||||    
T  27533016 ttaatctgatgaattgatgatactatggggattgaacttttgatgccactgtacaaagagtgggttgttacccacaatacttttgatgctatagtgttaa 27533115  T
Q  101 cttcacgagaaaagtcattcgcataactt 129  Q
    |||||| ||||||||||||| ||||||||    
T  27533116 cttcaccagaaaagtcattctcataactt 27533144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 47682530 - 47682673
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggg-gtgttactcaatacatttatgatgttatagtgtta 99  Q
    ||||| |||||||| |||||||||||||||| ||||||||||||  || ||||||  || |||| ||||||||||  |||||| | ||| ||  ||||||    
T  47682530 ttaatctgatgaattgatgatactatgaggaatgaacttttgataccactgtacaagcagtgggagtgttactcacaacattttttatgcta--gtgtta 47682627  T
Q  100 acttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||| | |||||||| || ||| ||||||||||||||||||||    
T  47682628 acttcaccaaaaaagtcactctcatgacttcaccataaaattttcc 47682673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 4330421 - 4330288
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaat-ggggtgttactcaatacatttatgatgttatagtg-tt 98  Q
    ||||| |||| ||| ||||||||||||| |||||||||||||||  || |||||| ||| | ||||||||||||| |||| || ||||| ||||||| ||    
T  4330421 ttaatctgataaattgatgatactatgatgactgaacttttgatcccactgtacaaacattgggggtgttactcactacacttttgatgctatagtgttt 4330322  T
Q  99 aacttcacgagaaaagtcattcgcataacttcac 132  Q
    | |||||  ||||||||||||| |||||||||||    
T  4330321 atcttcatcagaaaagtcattctcataacttcac 4330288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 46931545 - 46931406
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||| ||||||| ||||| |||||||| |  | |||| ||| |||||| ||||||| ||||||| |||||||||||||||||||||||    
T  46931545 tgatgaattgatgatattatgagggctgaatttttgatgccgttctacaaacagtggggtattactcattacatttttgatgttatagtgttaacttcac 46931446  T
Q  107 ---gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
        | |||| ||||||  |||||||||||||| ||||||    
T  46931445 aaaaaaaaaattcattcttataacttcaccatagaatttt 46931406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 3535072 - 3534925
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| ||| || | |||||||||||||||||||| || ||| ||| |  |||||||||||  ||| || |||||||||||||||||    
T  3535072 ttaatctgatgaattgataatattaaggggactgaacttttgatgtcactgcacaaacagtaaggtgttactcacaacacttttgatgttatagtgttaa 3534973  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    |||||| |||||| | ||||  || ||||||  ||| |||||||||||    
T  3534972 cttcactagaaaattaattctaatgacttcataatagaattttccttt 3534925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 15168236 - 15168082
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtca--gt-----gtacagacaatggggtgttactcaatacatttatgatgttata 93  Q
    ||||| |||||||| |||||||||||| ||||||||||||||||| ||  ||     ||||| ||| ||||||| |||||| |||| || ||||| ||||    
T  15168236 ttaatctgatgaattgatgatactatggggactgaacttttgatgccaccgtacaacgtacaaacagtggggtgctactcactacacttttgatgctata 15168137  T
Q  94 gtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||||| ||||||| ||||||  ||||| ||| ||||||| ||| |||||||||||    
T  15168136 gtgttgacttcaccagaaaaagcattctcatcacttcacgatagaattttccttt 15168082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 33725636 - 33725778
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| ||    | | | | |||| || ||||||||||| || ||||| ||||| ||| |    
T  33725636 ttaatatgatgaattgatgatactatgaggactgaacttttgatgccaccaaagaaatagtgggctgctactcaatacacttttgatgatatagcgttga 33725735  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| ||||||||||||| | | |||| |||||| ||||||    
T  33725736 cttcactagaaaagtcattctcttgactttaccatagaatttt 33725778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27267235 - 27267376
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||||||||||||  |||||||||||| ||| || |||||| ||| |||||||| ||||| ||||||| | |||   |||||||||    
T  27267235 ttaatctgatgaattgatgatactatggagactgaacttttaatgccactgtacaaacagtggggtgtcactcactacattttttatg--ctagtgttaa 27267332  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| |||||| ||| |||||| |||| ||||||||    
T  27267333 cttcaccaaaaaaatcattctcatgacttca-catataattttcc 27267376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 40884953 - 40884841
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| || ||||||||  ||||||||||||||||| ||  ||||| ||| ||||||| |||||| |||| || ||||||||| ||||| |    
T  40884953 ttaatctgatgaattgaagatactatagggactgaacttttgatgccaccgtacaaacagtggggtgctactcactacacttttgatgttatggtgttga 40884854  T
Q  101 cttcacgagaaaa 113  Q
    |||||| ||||||    
T  40884853 cttcaccagaaaa 40884841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 27227521 - 27227657
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||||||||||||||| || |||||| ||| || ||||      | ||||||| | |||   |||||||||    
T  27227521 ttaatctgatgaattgatgatactatgaggactgaacttttgatgccactgtacaaacagtgaggtg------agtacattttttatg--ctagtgttaa 27227612  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||| | |||| |||||| ||| ||||||||||| ||||||||    
T  27227613 cttcaccaaaaaaatcattctcatgacttcaccatagaattttcc 27227657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 18 - 157
Target Start/End: Original strand, 238566 - 238703
Alignment:
Q  18 tgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtca 117  Q
    |||||||||| |||||||||||||||||||| |||||| ||| | || |||||||||  |||||| | ||  ||||||||||||||||| | |||||| |    
T  238566 tgatactatggggactgaacttttgatgtcattgtacaaacagt-ggatgttactcacaacatttttaatactatagtgttaacttcaccaaaaaagtta 238664  T
Q  118 ttcgcataacttcaccataaaattttccttttatattaat 157  Q
    ||  | | ||||||| ||| |||||| | |||||||||||    
T  238665 ttttcgtgacttcactatagaatttttc-tttatattaat 238703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 27563941 - 27564084
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| ||| ||| |||  | |||||||||||||||||| | |||| ||| ||| |||||||||| || |||| | | |||||||||||||    
T  27563941 ttaatctgatgaattgataatattatcggaactgaacttttgatgtcactatacaaacagtggagtgttactcactatatttttaaagttatagtgttaa 27564040  T
Q  101 cttcac-gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    ||||||  | |||| |||||  |||||||||||| || ||||||    
T  27564041 cttcactaaaaaaaatcattttcataacttcaccgtagaatttt 27564084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 84 - 148
Target Start/End: Complemental strand, 22170811 - 22170747
Alignment:
Q  84 tgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttt 148  Q
    ||||||||||||||||||||||  ||||||||||||  ||| | ||||||||| |||||||||||    
T  22170811 tgatgttatagtgttaacttcattagaaaagtcattttcatgatttcaccatagaattttccttt 22170747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 146
Target Start/End: Complemental strand, 30254936 - 30254853
Alignment:
Q  63 gggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||||||||  || ||||||| ||||||||||||||||||||||  | ||||||||||   || ||||||||||| |||||||||    
T  30254936 gggtgttatccattacatttttgatgttatagtgttaacttcatcaaaaaagtcattattatgacttcaccatagaattttcct 30254853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 9 - 55
Target Start/End: Complemental strand, 25160764 - 25160718
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtaca 55  Q
    |||||| |||||||||||||||||||||||||||||| || ||||||    
T  25160764 atgaattgatgatactatgaggactgaacttttgatgccattgtaca 25160718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 145
Target Start/End: Complemental strand, 43579290 - 43579242
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    |||||||||| ||||||||||||| ||| ||||||||||| ||||||||    
T  43579290 ttaacttcactagaaaagtcattctcatgacttcaccatagaattttcc 43579242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 146
Target Start/End: Original strand, 13876919 - 13876968
Alignment:
Q  97 ttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    |||||||||| | ||||||||||  ||||||||||||||| |||||||||    
T  13876919 ttaacttcaccataaaagtcattttcataacttcaccatagaattttcct 13876968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 16 - 48
Target Start/End: Original strand, 1359934 - 1359966
Alignment:
Q  16 gatgatactatgaggactgaacttttgatgtca 48  Q
    |||||||||| ||||||||||||||||||||||    
T  1359934 gatgatactacgaggactgaacttttgatgtca 1359966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 44101 - 43959
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||| || |||||| |||| ||||||||||||| ||||||| |||| |||||| |||||    
T  44101 ttaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaa 44002  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | ||||||| |||  |  ||||||||||| ||||||    
T  44001 cttcaccaaaaaagtctttcttacgacttcaccatagaatttt 43959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 154686 - 154828
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaa 100  Q
    ||||| |||||||| |||||||||||||||||||||||||| ||| || |||||| |||| ||||||||||||| ||||||| |||| |||||| |||||    
T  154686 ttaatctgatgaattgatgatactatgaggactgaactttttatgccattgtacaaacaacggggtgttactcattacatttttgatattatagcgttaa 154785  T
Q  101 cttcacgagaaaagtcattcgcataacttcaccataaaatttt 143  Q
    |||||| | ||||||| |||  |  ||||||||||| ||||||    
T  154786 cttcaccaaaaaagtctttcttacgacttcaccatagaatttt 154828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 64; Significance: 8e-28; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 272 - 133
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| |||||||||||||||||||||||||||||| || |||||| ||| ||| ||||||||||  |||||| | ||  || ||||||||||||||    
T  272 tgatgaattgatgatactatgaggactgaacttttgatgccattgtacaaacagtggagtgttactcacaacattttttatactacagtgttaacttcac 173  T
Q  107 gagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
     ||||||||||||  | | ||||||||||| |||||||||    
T  172 cagaaaagtcattttcgtgacttcaccatagaattttcct 133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 9 - 119
Target Start/End: Original strand, 94432 - 94542
Alignment:
Q  9 atgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcacga 108  Q
    |||||| ||||||| |||| ||||  ||||||||||| || |||||| ||| |||||||||||||| |||| || |||||||||| |||||||||||  |    
T  94432 atgaattgatgatagtatggggaccaaacttttgatgccactgtacaaacagtggggtgttactcactacaattttgatgttataatgttaacttcatca 94531  T
Q  109 gaaaagtcatt 119  Q
    |||||||||||    
T  94532 gaaaagtcatt 94542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 408470 - 408559
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgtta 91  Q
    ||||| |||||||| |||||||||| |||||||||||||||||| ||| | |||| ||  |  ||||||||||| ||||||| ||||||||    
T  408470 ttaatctgatgaattgatgatacta-gaggactgaacttttgatttcattttacaaacggtaaggtgttactcattacatttttgatgtta 408559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 7 - 143
Target Start/End: Original strand, 146063 - 146199
Alignment:
Q  7 tgatgaatggatgatactatgaggactgaacttttgatgtcagtgtacagacaatggggtgttactcaatacatttatgatgttatagtgttaacttcac 106  Q
    |||||||| ||||||||||||| | ||||||||||||||||| | |||| | |||||||||||||||| ||||||| | |||||||| ||||||||| ||    
T  146063 tgatgaattgatgatactatgaaggctgaacttttgatgtcattctacaaataatggggtgttactcattacattttttatgttataatgttaacttaac 146162  T
Q  107 gagaaaagtcattcgcataacttcaccataaaatttt 143  Q
     | |||| ||||||  || |||||||| || ||||||    
T  146163 caaaaaaatcattcttatgacttcaccgtagaatttt 146199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0318 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0318
Description:

Target: scaffold0318; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 12053 - 11908
Alignment:
Q  1 ttaatttgatgaatggatgatactatgaggactgaacttttgatgtcagtg-tacagacaat-ggggtgttactcaatacatttatgatgttatagtgtt 98  Q
    ||||| |||||||| ||||||| |||||||||||||||||||||  || || |||| ||||| |||||||||||||  ||| || | ||||||| |||||    
T  12053 ttaatctgatgaattgatgatattatgaggactgaacttttgataccactgatacaaacaatgggggtgttactcacaacacttttaatgttatggtgtt 11954  T
Q  99 aacttcacgagaaaagtca-ttcgcataacttcaccataaaatttt 143  Q
    || ||||| |||||||||| ||| ||| ||||||||||| ||||||    
T  11953 aatttcaccagaaaagtcatttctcatgacttcaccatagaatttt 11908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 61 - 146
Target Start/End: Complemental strand, 42432 - 42347
Alignment:
Q  61 tggggtgttactcaatacatttatgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcct 146  Q
    ||||||||||||||  ||| || ||||||||||||||||||||||| |||||| | |||| ||| |||||||||||||||||||||    
T  42432 tggggtgttactcacaacacttttgatgttatagtgttaacttcaccagaaaaattattctcatgacttcaccataaaattttcct 42347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 84 - 151
Target Start/End: Complemental strand, 100882 - 100815
Alignment:
Q  84 tgatgttatagtgttaacttcacgagaaaagtcattcgcataacttcaccataaaattttccttttat 151  Q
    ||||||||||| ||||||||||| | |||| |||||| ||| ||||||||||| ||||||||||||||    
T  100882 tgatgttatagcgttaacttcaccaaaaaaatcattctcatgacttcaccatagaattttccttttat 100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 12137 - 12186
Alignment:
Q  96 gttaacttcacgagaaaagtcattcgcataacttcaccataaaattttcc 145  Q
    ||||||||||| ||||||||||||| |||||||||| |||| ||||||||    
T  12137 gttaacttcaccagaaaagtcattctcataacttcatcatagaattttcc 12186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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