View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF13989_low_3 (Length: 569)

Name: NF13989_low_3
Description: NF13989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF13989_low_3
NF13989_low_3
[»] scaffold0011 (4 HSPs)
scaffold0011 (40-344)||(217329-217634)
scaffold0011 (361-547)||(217659-217845)
scaffold0011 (80-339)||(189679-189942)
scaffold0011 (40-88)||(189280-189328)
[»] chr4 (6 HSPs)
chr4 (1-44)||(5874246-5874289)
chr4 (413-517)||(12377400-12377504)
chr4 (1-41)||(21802753-21802793)
chr4 (1-41)||(34738044-34738084)
chr4 (1-35)||(43942118-43942152)
chr4 (415-497)||(53481202-53481284)
[»] chr7 (5 HSPs)
chr7 (1-41)||(14755767-14755807)
chr7 (413-517)||(6800263-6800367)
chr7 (230-259)||(35874118-35874147)
chr7 (413-517)||(1717830-1717934)
chr7 (1-41)||(44393523-44393563)
[»] chr6 (1 HSPs)
chr6 (1-41)||(18882289-18882329)
[»] chr2 (5 HSPs)
chr2 (413-517)||(40368891-40368995)
chr2 (1-34)||(40652803-40652836)
chr2 (413-517)||(40366432-40366536)
chr2 (414-468)||(18697431-18697485)
chr2 (1-38)||(37904120-37904157)
[»] scaffold0061 (1 HSPs)
scaffold0061 (1-41)||(50590-50630)
[»] scaffold0017 (1 HSPs)
scaffold0017 (1-41)||(148004-148044)
[»] chr3 (6 HSPs)
chr3 (1-41)||(346592-346632)
chr3 (1-41)||(10179408-10179448)
chr3 (7-41)||(34209855-34209889)
chr3 (416-452)||(42830624-42830660)
chr3 (207-252)||(43383510-43383557)
chr3 (421-497)||(47746782-47746858)
[»] chr1 (2 HSPs)
chr1 (1-41)||(39623057-39623097)
chr1 (1-41)||(42332478-42332518)
[»] chr8 (7 HSPs)
chr8 (8-41)||(44212153-44212186)
chr8 (1-30)||(4138185-4138214)
chr8 (1-38)||(31686143-31686180)
chr8 (413-462)||(42452524-42452573)
chr8 (1-29)||(14597532-14597560)
chr8 (1-41)||(20171813-20171853)
chr8 (1-41)||(42124255-42124295)
[»] scaffold1521 (1 HSPs)
scaffold1521 (6-42)||(108-144)
[»] scaffold0152 (2 HSPs)
scaffold0152 (6-42)||(30575-30611)
scaffold0152 (6-42)||(31366-31402)
[»] scaffold0316 (1 HSPs)
scaffold0316 (1-35)||(5429-5463)


Alignment Details
Target: scaffold0011 (Bit Score: 250; Significance: 1e-138; HSPs: 4)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 250; E-Value: 1e-138
Query Start/End: Original strand, 40 - 344
Target Start/End: Original strand, 217329 - 217634
Alignment:
Q  40 attcttcttattttattgttttaaaggggcctatatgttattttttatacgcccattggtgtgttgttgttgatttacccgtcgtgaaaaggggtagttg 139  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||    
T  217329 attcttcttattttattgttataaaggggcctatatgttattttttatacgaccattggtgtgttgttgttgatttccccgtcgtgaaaaggggtagctg 217428  T
Q  140 aaatgaattttaatgcaccatc-gtcattaatataggaatattttgtaaaaattacggatgtccgataaataaatttgtctaaaagatgtaactattact 238  Q
    |||||||||||||| ||||||| | |||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  217429 aaatgaattttaatacaccatcagacattaatataggagaattttgtaaaaattacggatgtccgatgaataaatttgtctaaaagatgtaactattact 217528  T
Q  239 aaattatcatttatatataaactcattcaaggataatttttcatattatcctcttcccgtcttaaaataaatgacattgttgactgttacacacaagcca 338  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  217529 aaattgtcatttatatataaactcattcaaggataatttttcatattatcctctccccgtcctaaaataaatgacattgttgactgttacacacaagcca 217628  T
Q  339 acacac 344  Q
    ||||||    
T  217629 acacac 217634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 361 - 547
Target Start/End: Original strand, 217659 - 217845
Alignment:
Q  361 atggtgaacagagtttgaacaccgaaccttacataatatattatgcattgtctgagggagtgttctttattattacataacgttattttgcaggattctg 460  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  217659 atggtgaacagagtttgaaccccgaaccttacataatatattatgcattgtctgagggagtgttctttattattacataacgttattttgcaggattctg 217758  T
Q  461 ttcacgataaatggtgctggttgttagaccccattcacagatacacggtgaggggagagcatactcttttctgacaagtactggcgc 547  Q
    || ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  217759 ttaacgataaatggtgctggttgttagaccccattcacggatacacggtgaggggagagcatactcttttctgacaagtactggcgc 217845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #3
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 80 - 339
Target Start/End: Original strand, 189679 - 189942
Alignment:
Q  80 ttttttatacgcccattggtgtgttgttgttgatttacccgtcgtgaaaaggggtagttgaaatgaattttaatgcaccatcg-tcattaatataggaat 178  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||||  || |||||||||||||||| |||||||| || ||||||||||| |    
T  189679 ttttttatacgcccattggtgtgttgttgttgatttccccatcgtgaaaagggc-agctgaaatgaattttaatacaccatcggtccttaatataggagt 189777  T
Q  179 attttgtaaaaattacggatgtccgataaataaat----ttgtctaaaagatgtaactattactaaattatcatttatatataaactcattcaaggataa 274  Q
    |||||||||||||||| |||||| ||| |||||||    |||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||    
T  189778 attttgtaaaaattacagatgtcagatgaataaatataattgtctaaaagatgtaactattactaaattgtcgtttatatataaactcattcaaggataa 189877  T
Q  275 tttttcatattatcctcttcccgtcttaaaataaatgacattgttgactgttacacacaagccaa 339  Q
    ||||||||||||||||||  ||||| |||||||||||| ||||||||||||||||||||||||||    
T  189878 tttttcatattatcctctctccgtcctaaaataaatgatattgttgactgttacacacaagccaa 189942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 40 - 88
Target Start/End: Original strand, 189280 - 189328
Alignment:
Q  40 attcttcttattttattgttttaaaggggcctatatgttattttttata 88  Q
    |||||||||||||||||||||||||||||| |||||||||||| |||||    
T  189280 attcttcttattttattgttttaaaggggcatatatgttatttattata 189328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 9e-16; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 5874289 - 5874246
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagattct 44  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  5874289 tgtagcttagaatacatgtatatagagatagagatagagattct 5874246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 517
Target Start/End: Complemental strand, 12377504 - 12377400
Alignment:
Q  413 tgagggagtgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattcacagatacacggtgag 512  Q
    ||||||||||||||||  ||||||||||| || ||||||||||||||||||  ||||  |||   ||||||||||||||| ||||  | |||||||| ||    
T  12377504 tgagggagtgttctttgctattacataacattgttttgcaggattctgttcgagatacttggcagtggttgttagaccccgttcatgggtacacggttag 12377405  T
Q  513 gggag 517  Q
    |||||    
T  12377404 gggag 12377400  T

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Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21802793 - 21802753
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  21802793 tgtagcttagaatacatgtatatagagatagagatagagat 21802753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34738044 - 34738084
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  34738044 tgtaggttagaatacatgtatatagagatagagatagagat 34738084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 43942152 - 43942118
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagat 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  43942152 tgtagattagaatacatgtatatagagatagagat 43942118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 415 - 497
Target Start/End: Complemental strand, 53481284 - 53481202
Alignment:
Q  415 agggagtgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattca 497  Q
    |||||||||||| | |||||| ||||| || ||||||||||  ||||||| || |||||| | ||| ||||||| ||||||||    
T  53481284 agggagtgttctctgttattatataacatttttttgcaggaaactgttcatgacaaatggcggtggctgttagatcccattca 53481202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14755807 - 14755767
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  14755807 tgtagcttagaatacatgtatatagagatagagatagagat 14755767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 6800263 - 6800367
Alignment:
Q  413 tgagggagtgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattcacagatacacggtgag 512  Q
    |||||||| |||||||  ||||||||||| || ||||||||||||||||||  ||||  |||   ||||||||||||||| ||||  | |||||||| ||    
T  6800263 tgagggagcgttctttgctattacataacattgttttgcaggattctgttcgtgatacttggcagtggttgttagaccccgttcatgggtacacggttag 6800362  T
Q  513 gggag 517  Q
    |||||    
T  6800363 gggag 6800367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 259
Target Start/End: Complemental strand, 35874147 - 35874118
Alignment:
Q  230 actattactaaattatcatttatatataaa 259  Q
    ||||||||||||||||||||||||||||||    
T  35874147 actattactaaattatcatttatatataaa 35874118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 413 - 517
Target Start/End: Original strand, 1717830 - 1717934
Alignment:
Q  413 tgagggagtgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattcacagatacacggtgag 512  Q
    |||||||||||||| | ||||||  |||| |  ||||||||||  ||||||| || |||||| | ||| ||||||| ||||||||  | ||| |||||||    
T  1717830 tgagggagtgttctctgttattatctaacatctttttgcaggaaactgttcatgacaaatggcggtggctgttagatcccattcatggttactcggtgag 1717929  T
Q  513 gggag 517  Q
    |||||    
T  1717930 gggag 1717934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44393563 - 44393523
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| ||| ||||||| |||||||||||||||||||||||    
T  44393563 tgtagtttaaaatacatatatatagagatagagatagagat 44393523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18882329 - 18882289
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  18882329 tgtagcttagaatacatgtatatagagatagagatagagat 18882289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 413 - 517
Target Start/End: Complemental strand, 40368995 - 40368891
Alignment:
Q  413 tgagggagtgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattcacagatacacggtgag 512  Q
    ||||||||||| ||||  ||||||||||| || ||||||||||||||||||| ||||  |||   ||||||||||||||| ||||  | |||||||| ||    
T  40368995 tgagggagtgtcctttgctattacataacattgttttgcaggattctgttcatgatacttggcagtggttgttagaccccgttcatgggtacacggttag 40368896  T
Q  513 gggag 517  Q
    |||||    
T  40368895 gggag 40368891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 40652803 - 40652836
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagaga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  40652803 tgtagcttagaatacatgtatatagagatagaga 40652836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 413 - 517
Target Start/End: Complemental strand, 40366536 - 40366432
Alignment:
Q  413 tgagggagtgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattcacagatacacggtgag 512  Q
    ||||||| ||||| || ||| |||||||| |||||||||||||| ||||||  ||||  ||| | |||||| |||| ||||||||  | ||||||||||     
T  40366536 tgagggaatgttccttgttactacataacattattttgcaggatactgttccagatacttggcggtggttgctagatcccattcatggttacacggtgaa 40366437  T
Q  513 gggag 517  Q
    |||||    
T  40366436 gggag 40366432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 414 - 468
Target Start/End: Complemental strand, 18697485 - 18697431
Alignment:
Q  414 gagggagtgttctttattattacataacgttattttgcaggattctgttcacgat 468  Q
    ||||||||||||| | |||||||||||| || |||||||||||  ||||||||||    
T  18697485 gagggagtgttctgttttattacataacattgttttgcaggataatgttcacgat 18697431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 37904120 - 37904157
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagataga 38  Q
    |||||||||||||||||||||||| ||||| |||||||    
T  37904120 tgtagcttagaatacatgtatatatagatatagataga 37904157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 50630 - 50590
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  50630 tgtagcttagaatacatgtatatagagatagggatagagat 50590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 148004 - 148044
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  148004 tgtagcttagaatacatgtatatagagatagggatagagat 148044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 346632 - 346592
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  346632 tgtagtttagaatacatgtatatagagatagagatagagat 346592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10179408 - 10179448
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| |||||||||||||||||||||||||||||||||||    
T  10179408 tgtagtttagaatacatgtatatagagatagagatagagat 10179448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 34209889 - 34209855
Alignment:
Q  7 ttagaatacatgtatatagagatagagatagagat 41  Q
    |||||||||||||||||||||||||||||||||||    
T  34209889 ttagaatacatgtatatagagatagagatagagat 34209855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 416 - 452
Target Start/End: Original strand, 42830624 - 42830660
Alignment:
Q  416 gggagtgttctttattattacataacgttattttgca 452  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42830624 gggagtgttctttattattacataacgttgttttgca 42830660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 207 - 252
Target Start/End: Complemental strand, 43383557 - 43383510
Alignment:
Q  207 aataaatttgtctaaaagatgta--actattactaaattatcatttat 252  Q
    ||||||| ||||||||| |||||  |||||||||||||||||||||||    
T  43383557 aataaatatgtctaaaatatgtatgactattactaaattatcatttat 43383510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 421 - 497
Target Start/End: Complemental strand, 47746858 - 47746782
Alignment:
Q  421 tgttctttattattacataacgttattttgcaggattctgttcacgataaatggtgctggttgttagaccccattca 497  Q
    |||||||| |||||||||||| |||||||||||||  ||||||| |  |||||| | |||||| || | ||||||||    
T  47746858 tgttctttgttattacataacattattttgcaggacactgttcaagtcaaatggcggtggttgctaaatcccattca 47746782  T

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Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39623097 - 39623057
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  39623097 tgtagcttaaaatacatgtatatagagatagagatagagat 39623057  T

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Target: chr1; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42332518 - 42332478
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  42332518 tgtagtttataatacatgtatatagagatagagatagagat 42332478  T

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Target: chr8 (Bit Score: 34; Significance: 0.0000000008; HSPs: 7)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 41
Target Start/End: Complemental strand, 44212186 - 44212153
Alignment:
Q  8 tagaatacatgtatatagagatagagatagagat 41  Q
    ||||||||||||||||||||||||||||||||||    
T  44212186 tagaatacatgtatatagagatagagatagagat 44212153  T

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Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 4138214 - 4138185
Alignment:
Q  1 tgtagcttagaatacatgtatatagagata 30  Q
    ||||||||||||||||||||||||||||||    
T  4138214 tgtagcttagaatacatgtatatagagata 4138185  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 31686180 - 31686143
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagataga 38  Q
    ||||| |||||||||||||||| |||||||||||||||    
T  31686180 tgtagtttagaatacatgtatacagagatagagataga 31686143  T

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Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 413 - 462
Target Start/End: Original strand, 42452524 - 42452573
Alignment:
Q  413 tgagggagtgttctttattattacataacgttattttgcaggattctgtt 462  Q
    ||||||||||||||||  |||| |||||| || |||||||||||||||||    
T  42452524 tgagggagtgttctttgctatttcataacattgttttgcaggattctgtt 42452573  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 14597532 - 14597560
Alignment:
Q  1 tgtagcttagaatacatgtatatagagat 29  Q
    |||||||||||||||||||||||||||||    
T  14597532 tgtagcttagaatacatgtatatagagat 14597560  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 20171853 - 20171813
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| ||| ||||||| |||||||||||||||||||||||    
T  20171853 tgtagtttaaaatacatatatatagagatagagatagagat 20171813  T

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Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 42124295 - 42124255
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagatagagat 41  Q
    ||||| |||||||||||| | ||||||||||||||||||||    
T  42124295 tgtaggttagaatacatgcacatagagatagagatagagat 42124255  T

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Target: scaffold1521 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold1521
Description:

Target: scaffold1521; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Complemental strand, 144 - 108
Alignment:
Q  6 cttagaatacatgtatatagagatagagatagagatt 42  Q
    ||||||||||||||| |||||||||||||||||||||    
T  144 cttagaatacatgtagatagagatagagatagagatt 108  T

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Target: scaffold0152 (Bit Score: 33; Significance: 0.000000003; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 30575 - 30611
Alignment:
Q  6 cttagaatacatgtatatagagatagagatagagatt 42  Q
    ||||||||||||||| |||||||||||||||||||||    
T  30575 cttagaatacatgtagatagagatagagatagagatt 30611  T

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Target: scaffold0152; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 42
Target Start/End: Original strand, 31366 - 31402
Alignment:
Q  6 cttagaatacatgtatatagagatagagatagagatt 42  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31366 cttagaatacatgtagatagagatagagatagagatt 31402  T

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Target: scaffold0316 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 5429 - 5463
Alignment:
Q  1 tgtagcttagaatacatgtatatagagatagagat 35  Q
    ||||| |||||||||||||||||||||||||||||    
T  5429 tgtagtttagaatacatgtatatagagatagagat 5463  T

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